Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007187

Physical Location & Seq

Genomic Coordinates Reverse (-)

14035824 .. 14040638

Gene Structure 4815 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29971

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3099 bp

ATGGAAAGAGGAAGAGGCGGCGGTTACGATGGCCGTAACGGCGGTTACGGTGGCAGAGGGAACAGCGGAGGAGAGAGAGGGAGAGGCAGTTATGGTAACAGAGGAGGGAGAGTTGGCGGTTATGCTGACGTGGTTTACGGCGGTCGAGGAGAGAGAGGAAGAGGCGGTTATGGCGGCGGCGGCGGCGGCGGTTACAACCGTCAACAACCGCCGCAGCAAGATCAGCAGTGGAATAATCAGAATCGCGGCCAGCCTGGGAGGTCTGATCAGCAAACTTGGAGGTCTTCTTCTTCTTCTCAGCCGCAAGATCAGCAGTCGGGGAGGTATTCGGCCTCTTCTCAACCACAGGATCAGCAGCCTTGGAGGTCTTCTGGTCAACCGCCACAGGAGCAGCAGTGGAGTCAGAATCGAGGCCAGCCTCGGAGGACTTCTCCGGCACCGGCACCGGCACCGTCTTCTTCTTCTTCTTCATCTCCTTCTCCAACCAAGAACAGTCTTGCTGACGCTGTTGTTTCTGGAGTGCAATCACTGAAAATTTCAAAGCAGACATCTCCACCATCTCCGTTGAACAGTGCAGACAAACTTCTACCTGTGAGACGACCTGATCAGGGAGGCACAAAGGCTGTCCAAACTGTTAGGCTTCGTGCTAATCACTTCAATGTCTCCTACAATCCTCAGAGTACTATAATGCACTATGATGTTAATGTCAAACCAGTGAATGCTACAAGGAATGGCAGACCAGTTAGAATTATGAAGTCTGATCTTGCTGCAATCAGAAACAAGTTGTCCTCTGATAATCCTTCAAAATTTCCATTATTGATGACTGCATATGATGGTGAGAAGAATATCTTTAGTGCTGTGACATTACCCACTGGAGAGTTTAAGGTGGAGGTTCCTGAGGAAGAAGGCACACGCATAAGTTCGTATATAGTCACTATAAAACTTGTAAATGAGCTCAAGCTTTGCAAGTTGAAGGAGTACTTAAGTGGTCAGCTGTTGTCTATCCCTCGTGATATATTGCAGGGAATGGATTTAGTGATGAAGGAGAATCCGACTCGGCGGTTGATTCCTGTTGGCCGCAGCTTTTACCCTACCGAATTTAATCCAGACGATGACCTTGGACAGGGTACTGCTGCATTTAGAGGGTTTCAGCATAGTTTAAGGCTCACTTCCCAGGGTCCTGCTATGAATTTTACTTTAAATAATTTCAGGAGGTTTAAGAGAGATGTTGAGAATGTTTTAAGGGGATTGAAAGTTACTGTGACTCATCGTCCAACCAAGCAGAAGTATGTTATCAAGGGGCTAACTGATAGGAATGCAGGGGACATTACATTTGAAGCTGTTGATGTTGATGGCCAGGTTCCACCTAGAAGGCTTAGACTTGTTGATTATTTCAGAGACAAATACAAGGATATCAAGTACAAAGACATTCCCTGCTTAGATTTGGGGAAAAATGGTAGGAGGAATGATACACCGTTGGAATTTTGTGTCTTAGTTGAAGGGCAAAGATACCCTAAGGAGCAGTTGGGCAGAGATGCAGCCATTATGTTGAAGAACTTATCATTGGTTGCACCAGGGGTTAGAGAGAACAACATACGCAACATGGTACGGTCGGGAGATGGACCTTGTGGTGGCGGCATTATCCAGAACTTTGGAATTGAAGTCAACATGAATATGACACAAGTAACAGGGCGTGTCATTGGCCCACCTGAGTTGAAGCTGGGGGATTTTGGTGGCAAGGTGACTAAAGTAAAAGTTGACAATGAGAAATGTCACTGGAATCTAGTTGGCAGGTCATTAGTGGAAGGAAAATCAATAGCTCGCTGGGCTGTGCTTGACTTTAGCTGTTATGATCAAGACTGTTATGATCGGGACAAACTGGACCCTTATCAATTCATCCCAAAGCTCATCACTCGGTGCAACAAATTGGGAATGAGAATGGAAGAGCCTCGCTTGTATGAAACCTCTTCCATGAGACCATTTTCTAGCGTCAACTTGCTTCGGGAACTGCTTGAAACTGTTAATGGGAAGGTACTTCAAGAAGGCAAGGGCCACTTACAACTACTTGTTTGTGTAATGTCTAGAAAAGACCCTGGTTACAAGTATCTGAAGTGGATCTGTGAGACTCAAATTGGTATTGTGACGCAGTGCTGCCTGTCAAAGATGGCCACCAGGCCCAGTGACCAGTTTCTTGCAAATCTTGCACTGAAGATCAATGCGAAGCTTGGAGGCAGTAATGTAGAGCTGATTGACCGGCTCCCGCTCTTTGAGGGTGCTGGCCCTGTTATGTTTGTGGGGGCTGACGTTAATCATCCTGCGGCTCGGAACACAACAAGTCCATCAATAGCAGCTGTGGTTGCCACTATAAACTGGCCTGCTGTGAATCGTTATGCTGCACGAGTCCGACCCCAGTACCATCGTACTGAGAGCATATCGAATTTTGGAGACATGGTTTTGGAGCTTGTTGAATCGTATTTTAGAATAAATAAAGTGAAGCCGGAAAAAATTGTTGTTTTCCGAGATGGTGTAAGTGAGGGGCAATTTGATATGGTTCTCAATGAAGAGTTACTAGATCTGAAGAGGGCTTTGGGAACTATAAACTACTTTCCAACCATCACTCTGATTGTTGCTCAAAAGCGGCATCATACTCGGCTGTTTCAGGAGAATGGACGTTCCAATGTATCTCCAGGAACTGTTGTGGACACAAGGATTGTGCACCCATTTGAGTTTGACTTCTATCTCTGCAGTCACTATGGAAGCCTTGGGACAAGCAAGCCGACACACTACTATGTTCTTTGGGATGAGCACAGTTTTACTTCCGACCAGTTGCAGAAGCTCATATATGACTTGTGCTTTACCTTTGCAAGGTGCACGAAACCTGTCTCTTTGGTTCCGCCAGTGTACTATGCTGACCTTGTGGCCTACAGAGGGAGATTGTACCATGAGACTATGACCGCGGGACTGTCTCCAGGTTCCGTAACATCCTCCTCCTCCTCAGCATCATCATCATCGGCACCTTCAACACTGTCAGTGGGTTCTCTGGATGACAGGTTTTATAGATTGCATGTTGACCTGGAAAACATTATGTTTTTCATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0016032 GO:0019048 GO:0035197 GO:0035821 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0061980 GO:0097159 GO:0098542 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

1032

Amino Acids

114.86

Weight (kDa)

9.46

Isoelectric Point (pI)

46.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoN	PF16486	211 - 347	2.2e-23	N-terminal domain of argonaute
ArgoL1	PF08699	357 - 397	6.8e-08	Argonaute linker 1 domain
PAZ	PF02170	403 - 510	4.1e-21	PAZ domain
ArgoL2	PF16488	528 - 573	3.1e-07	Argonaute linker 2 domain
Piwi	PF02171	689 - 978	8.8e-93	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31280 AT1G31290 AT1G31290 AT1G31290
fragaria_vesca	FvH4_3g11980
malus_domestica	MD05G1256100.v1.1 MD10G1236300.v1.1 MD10G1236400.v1.1
prunus_persica	Prupe.4G108000_v2.0.a1 Prupe.4G108100_v2.0.a1
pyrus_communis	pycom05g23500 pycom05g23510 pycom05g23520 pycom10g19770 pycom10g19780
rosa_chinensis	RchiOBHm_Chr5g0019581
rosa_laevigata	RLG00000032457
rosa_roxburghii	Rroxscaffold_1G00058500
rosa_rugosa	Rorug05G0052100 Rorug05G0052200
rosa_samantha	Rh5AG142700 Rh5BG141200 Rh5CG153300 Rh5DG141900
rosa_wichuraiana	Rw5G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1782
AccB1I	GGYRCC	4 cut(s)	436, 442, 448, 3013
AccBSI	CCGCTC	1 cut(s)	2263
AccII	CGCG	2 cut(s)	246, 2957
AclWI	GGATC	2 cut(s)	357, 2123
AcoI	YGGCCR	5 cut(s)	31, 247, 1075, 1354, 2166
AcsI	RAATTY	6 cut(s)	534, 806, 1097, 1189, 1481, 2437
AcuI	CTGAAG	3 cut(s)	2129, 2228, 2597
AdeI	CACNNNGTG	1 cut(s)	1917
AfiI	CCNNNNNNNGG	5 cut(s)	608, 1123, 1631, 2865, 2928
AflII	CTTAAG	1 cut(s)	982
AhdI	GACNNNNNGTC	1 cut(s)	1269
AjiI	CACGTC	1 cut(s)	130
AjnI	CCWGG	9 cut(s)	253, 1173, 1356, 1573, 2092, 2171, 2686, 2968, 3072
AjuI	GAANNNNNNNTTGG	4 cut(s)	1547, 1579, 2570, 2602
Alw21I	GWGCWC	4 cut(s)	957, 2718, 2808, 2873
Alw26I	GTCTC	9 cut(s)	589, 667, 1392, 1969, 2117, 2439, 2887, 2939, 2970
Alw44I	GTGCAC	2 cut(s)	2714, 2869
AlwI	GGATC	2 cut(s)	357, 2123
AlwNI	CAGNNNCTG	1 cut(s)	2693
ApaLI	GTGCAC	2 cut(s)	2714, 2869
ApoI	RAATTY	6 cut(s)	534, 806, 1097, 1189, 1481, 2437
ArsI	GACNNNNNNTTYG	2 cut(s)	1316, 1348
AspS9I	GGNCC	7 cut(s)	1178, 1622, 1703, 1882, 2050, 2175, 2279
AsuHPI	GGTGA	2 cut(s)	848, 1753
AvaII	GGWCC	3 cut(s)	1178, 1622, 1882
AxyI	CCTNAGG	2 cut(s)	897, 1515
BaeGI	GKGCMC	2 cut(s)	2718, 2873
BaeI	ACNNNNGTAYC	2 cut(s)	2396, 2429
BalI	TGGCCA	2 cut(s)	1356, 2168
BanI	GGYRCC	4 cut(s)	436, 442, 448, 3013
BanII	GRGCYC	1 cut(s)	957
BauI	CACGAG	2 cut(s)	1008, 2397
BbsI	GAAGAC	3 cut(s)	276, 360, 447
Bbv12I	GWGCWC	4 cut(s)	957, 2718, 2808, 2873
BbvCI	CCTCAGC	1 cut(s)	2995
BceAI	ACGGC	3 cut(s)	18, 55, 154
BcgI	CGANNNNNNTGC	2 cut(s)	2630, 2664
BciT130I	CCWGG	9 cut(s)	255, 1175, 1358, 1575, 2094, 2173, 2688, 2970, 3074
BclI	TGATCA	3 cut(s)	265, 604, 1852
BcoDI	GTCTC	9 cut(s)	589, 667, 1392, 1969, 2117, 2439, 2887, 2939, 2970
BfaI	CTAG	5 cut(s)	1368, 1784, 1986, 2082, 2570
BfmI	CTRYAG	2 cut(s)	2743, 2923
BfrI	CTTAAG	1 cut(s)	982
BfuAI	ACCTGC	1 cut(s)	1782
BglI	GCCNNNNNGGC	1 cut(s)	39
BglII	AGATCT	1 cut(s)	2572
BmcAI	AGTACT	2 cut(s)	682, 980
Bme1390I	CCNGG	9 cut(s)	255, 1175, 1358, 1575, 2094, 2173, 2688, 2970, 3074
Bme18I	GGWCC	3 cut(s)	1178, 1622, 1882
BmeRI	GACNNNNNGTC	1 cut(s)	1269
BmgBI	CACGTC	1 cut(s)	130
BmgT120I	GGNCC	7 cut(s)	1178, 1622, 1703, 1882, 2050, 2175, 2279
BmrFI	CCNGG	9 cut(s)	255, 1175, 1358, 1575, 2094, 2173, 2688, 2970, 3074
BmrI	ACTGGG	2 cut(s)	2172, 2404
BmsI	GCATC	3 cut(s)	1525, 2650, 3008
BmuI	ACTGGG	2 cut(s)	2172, 2404
BpiI	GAAGAC	3 cut(s)	276, 360, 447
BplI	GAGNNNNNCTC	2 cut(s)	415, 447
BpmI	CTGGAG	4 cut(s)	537, 894, 2670, 2952
Bpu10I	CCTNAGC	1 cut(s)	2995
BpuEI	CTTGAG	1 cut(s)	941
BsaI	GGTCTC	1 cut(s)	1969
BsaXI	ACNNNNNCTCC	8 cut(s)	73, 96, 103, 126, 380, 410, 2436, 2466
Bsc4I	CCNNNNNNNGG	5 cut(s)	608, 1123, 1631, 2865, 2928
Bse118I	RCCGGY	3 cut(s)	439, 445, 2253
Bse21I	CCTNAGG	2 cut(s)	897, 1515
BseBI	CCWGG	9 cut(s)	255, 1175, 1358, 1575, 2094, 2173, 2688, 2970, 3074
BseGI	GGATG	5 cut(s)	1896, 2311, 2806, 2981, 3049
BseLI	CCNNNNNNNGG	5 cut(s)	608, 1123, 1631, 2865, 2928
BseMII	CTCAG	6 cut(s)	311, 689, 888, 1701, 2415, 3009
BseRI	GAGGAG	6 cut(s)	84, 117, 162, 2977, 2980, 2983
BseSI	GKGCMC	2 cut(s)	2718, 2873
BseYI	CCCAGC	2 cut(s)	1720, 1824
BsgI	GTGCAG	2 cut(s)	594, 2379
Bsh1236I	CGCG	2 cut(s)	246, 2957
Bsh1285I	CGRYCG	2 cut(s)	145, 1613
BshNI	GGYRCC	4 cut(s)	436, 442, 448, 3013
BsiEI	CGRYCG	2 cut(s)	145, 1613
BsiHKAI	GWGCWC	4 cut(s)	957, 2718, 2808, 2873
BsiSI	CCGG	5 cut(s)	434, 440, 446, 2254, 2498
BslFI	GGGAC	4 cut(s)	1337, 1886, 2779, 2973
BslI	CCNNNNNNNGG	5 cut(s)	608, 1123, 1631, 2865, 2928
BsmAI	GTCTC	9 cut(s)	589, 667, 1392, 1969, 2117, 2439, 2887, 2939, 2970
BsmBI	CGTCTC	1 cut(s)	589
BsmFI	GGGAC	4 cut(s)	1337, 1886, 2779, 2973
BsmI	GAATGC	2 cut(s)	724, 1321
Bso31I	GGTCTC	1 cut(s)	1969
Bsp1286I	GDGCHC	4 cut(s)	957, 2718, 2808, 2873
BspCNI	CTCAG	6 cut(s)	310, 688, 889, 1702, 2416, 3008
BspFNI	CGCG	2 cut(s)	246, 2957
BspMAI	CTGCAG	1 cut(s)	2747
BspMI	ACCTGC	1 cut(s)	1782
BspPI	GGATC	2 cut(s)	357, 2123
BspQI	GCTCTTC	1 cut(s)	1938
BspT107I	GGYRCC	4 cut(s)	436, 442, 448, 3013
BspTI	CTTAAG	1 cut(s)	982
BspTNI	GGTCTC	1 cut(s)	1969
BsrBI	CCGCTC	1 cut(s)	2263
BsrFI	RCCGGY	3 cut(s)	439, 445, 2253
BssAI	RCCGGY	3 cut(s)	439, 445, 2253
BssSI	CACGAG	2 cut(s)	1008, 2397
BssT1I	CCWWGG	3 cut(s)	359, 1117, 2761
Bst2BI	CACGAG	2 cut(s)	1008, 2397
Bst2UI	CCWGG	9 cut(s)	255, 1175, 1358, 1575, 2094, 2173, 2688, 2970, 3074
Bst6I	CTCTTC	7 cut(s)	7, 154, 340, 1938, 1972, 2556, 2573
BstAFI	CTTAAG	1 cut(s)	982
BstAPI	GCANNNNNTGC	1 cut(s)	2201
BstC8I	GCNNGC	6 cut(s)	251, 416, 1822, 2278, 2376, 2774
BstDSI	CCRYGG	1 cut(s)	2955
BstENI	CCTNNNNNAGG	2 cut(s)	1121, 2863
BstF5I	GGATG	5 cut(s)	1896, 2311, 2806, 2981, 3049
BstFNI	CGCG	2 cut(s)	246, 2957
BstMAI	GTCTC	9 cut(s)	589, 667, 1392, 1969, 2117, 2439, 2887, 2939, 2970
BstMCI	CGRYCG	2 cut(s)	145, 1613
BstNI	CCWGG	9 cut(s)	255, 1175, 1358, 1575, 2094, 2173, 2688, 2970, 3074
BstNSI	RCATGY	1 cut(s)	3068
BstSCI	CCNGG	9 cut(s)	253, 1173, 1356, 1573, 2092, 2171, 2686, 2968, 3072
BstSFI	CTRYAG	2 cut(s)	2743, 2923
BstSLI	GKGCMC	2 cut(s)	2718, 2873
BstUI	CGCG	2 cut(s)	246, 2957
BstV2I	GAAGAC	3 cut(s)	276, 360, 447
BstX2I	RGATCY	2 cut(s)	2115, 2572
BstXI	CCANNNNNNTGG	1 cut(s)	1652
BstYI	RGATCY	2 cut(s)	2115, 2572
Bsu36I	CCTNAGG	2 cut(s)	897, 1515
BtgI	CCRYGG	1 cut(s)	2955
BtrI	CACGTC	1 cut(s)	130
BtsCI	GGATG	5 cut(s)	1896, 2311, 2806, 2981, 3049
BtsI	GCAGTG	3 cut(s)	233, 401, 2153
BveI	ACCTGC	1 cut(s)	1782
Cac8I	GCNNGC	6 cut(s)	251, 416, 1822, 2278, 2376, 2774
CaiI	CAGNNNCTG	1 cut(s)	2693
Cfr10I	RCCGGY	3 cut(s)	439, 445, 2253
Cfr13I	GGNCC	7 cut(s)	1178, 1622, 1703, 1882, 2050, 2175, 2279
Cfr42I	CCGCGG	1 cut(s)	2958
CseI	GACGC	3 cut(s)	512, 1978, 2152
CspCI	CAANNNNNGTGG	2 cut(s)	1695, 1730
CviAII	CATG	6 cut(s)	1603, 1669, 1972, 2449, 2942, 3065
DraI	TTTAAA	1 cut(s)	1200
DraIII	CACNNNGTG	1 cut(s)	1917
DriI	GACNNNNNGTC	1 cut(s)	1269
EaeI	YGGCCR	5 cut(s)	31, 247, 1075, 1354, 2166
Eam1104I	CTCTTC	7 cut(s)	7, 154, 340, 1938, 1972, 2556, 2573
Eam1105I	GACNNNNNGTC	1 cut(s)	1269
EarI	CTCTTC	7 cut(s)	7, 154, 340, 1938, 1972, 2556, 2573
EciI	GGCGGA	1 cut(s)	2883
Ecl136II	GAGCTC	1 cut(s)	955
Eco130I	CCWWGG	3 cut(s)	359, 1117, 2761
Eco24I	GRGCYC	1 cut(s)	957
Eco31I	GGTCTC	1 cut(s)	1969
Eco32I	GATATC	1 cut(s)	1414
Eco47I	GGWCC	3 cut(s)	1178, 1622, 1882
Eco53kI	GAGCTC	1 cut(s)	955
Eco57I	CTGAAG	3 cut(s)	2129, 2228, 2597
Eco81I	CCTNAGG	2 cut(s)	897, 1515
EcoICRI	GAGCTC	1 cut(s)	955
EcoNI	CCTNNNNNAGG	2 cut(s)	1121, 2863
EcoO109I	RGGNCCY	1 cut(s)	1178
EcoRII	CCWGG	9 cut(s)	253, 1173, 1356, 1573, 2092, 2171, 2686, 2968, 3072
EcoRV	GATATC	1 cut(s)	1414
EcoT14I	CCWWGG	3 cut(s)	359, 1117, 2761
EcoT38I	GRGCYC	1 cut(s)	957
ErhI	CCWWGG	3 cut(s)	359, 1117, 2761
Esp3I	CGTCTC	1 cut(s)	589
FaeI	CATG	6 cut(s)	1606, 1672, 1975, 2452, 2945, 3068
FalI	AAGNNNNNCTT	8 cut(s)	833, 865, 965, 997, 1153, 1185, 2039, 2071
FaqI	GGGAC	4 cut(s)	1337, 1886, 2779, 2973
FatI	CATG	6 cut(s)	1602, 1668, 1971, 2448, 2941, 3064
FauI	CCCGC	2 cut(s)	2268, 2950
FauNDI	CATATG	1 cut(s)	829
FbaI	TGATCA	3 cut(s)	265, 604, 1852
FokI	GGATG	5 cut(s)	1883, 2298, 2813, 2968, 3056
FriOI	GRGCYC	1 cut(s)	957
FspBI	CTAG	5 cut(s)	1368, 1784, 1986, 2082, 2570
GsaI	CCCAGC	2 cut(s)	1724, 1828
GsuI	CTGGAG	4 cut(s)	537, 894, 2670, 2952
HapII	CCGG	5 cut(s)	434, 440, 446, 2254, 2498
HgaI	GACGC	3 cut(s)	512, 1978, 2152
Hin1II	CATG	6 cut(s)	1606, 1672, 1975, 2452, 2945, 3068
HincII	GTYRAC	6 cut(s)	203, 377, 1666, 1759, 1993, 3070
HindII	GTYRAC	6 cut(s)	203, 377, 1666, 1759, 1993, 3070
HindIII	AAGCTT	2 cut(s)	959, 2222
HpaII	CCGG	5 cut(s)	434, 440, 446, 2254, 2498
HphI	GGTGA	2 cut(s)	848, 1753
HpyCH4IV	ACGT	3 cut(s)	129, 2304, 2671
HpySE526I	ACGT	3 cut(s)	129, 2304, 2671
Hsp92II	CATG	6 cut(s)	1606, 1672, 1975, 2452, 2945, 3068
Ksp22I	TGATCA	3 cut(s)	265, 604, 1852
KspI	CCGCGG	1 cut(s)	2958
LguI	GCTCTTC	1 cut(s)	1938
LmnI	GCTCC	4 cut(s)	388, 1519, 2262, 2458
LweI	GCATC	3 cut(s)	1525, 2650, 3008
MaeI	CTAG	5 cut(s)	1368, 1784, 1986, 2082, 2570
MaeII	ACGT	3 cut(s)	129, 2304, 2671
MbiI	CCGCTC	1 cut(s)	2263
MflI	RGATCY	2 cut(s)	2115, 2572
MhlI	GDGCHC	4 cut(s)	957, 2718, 2808, 2873
MlsI	TGGCCA	2 cut(s)	1356, 2168
MluNI	TGGCCA	2 cut(s)	1356, 2168
MlyI	GAGTC	5 cut(s)	409, 1048, 1258, 2119, 2409
MmeI	TCCRAC	7 cut(s)	506, 1076, 1298, 1458, 2428, 2633, 2844
Mox20I	TGGCCA	2 cut(s)	1356, 2168
MscI	TGGCCA	2 cut(s)	1356, 2168
MslI	CAYNNNNRTG	4 cut(s)	657, 696, 1673, 2787
Msp20I	TGGCCA	2 cut(s)	1356, 2168
MspA1I	CMGCKG	4 cut(s)	66, 994, 2351, 2957
MspCI	CTTAAG	1 cut(s)	982
MspI	CCGG	5 cut(s)	434, 440, 446, 2254, 2498
MspR9I	CCNGG	9 cut(s)	255, 1175, 1358, 1575, 2094, 2173, 2688, 2970, 3074
Mva1269I	GAATGC	2 cut(s)	724, 1321
MvaI	CCWGG	9 cut(s)	255, 1175, 1358, 1575, 2094, 2173, 2688, 2970, 3074
MvnI	CGCG	2 cut(s)	246, 2957
NdeI	CATATG	1 cut(s)	829
NlaIII	CATG	6 cut(s)	1606, 1672, 1975, 2452, 2945, 3068
NmeAIII	GCCGAG	2 cut(s)	1036, 2629
NmuCI	GTSAC	8 cut(s)	859, 931, 1261, 1741, 1772, 2140, 2180, 2747
NspI	RCATGY	1 cut(s)	3068
PasI	CCCWGGG	1 cut(s)	1174
PciSI	GCTCTTC	1 cut(s)	1938
PctI	GAATGC	2 cut(s)	724, 1321
PfeI	GAWTC	7 cut(s)	241, 406, 1048, 1066, 1780, 2383, 2468
PfoI	TCCNGGA	1 cut(s)	2686
PleI	GAGTC	5 cut(s)	408, 1048, 1258, 2119, 2408
PpsI	GAGTC	5 cut(s)	408, 1048, 1258, 2119, 2408
PpuMI	RGGWCCY	1 cut(s)	1178
Psp124BI	GAGCTC	1 cut(s)	957
Psp5II	RGGWCCY	1 cut(s)	1178
Psp6I	CCWGG	9 cut(s)	253, 1173, 1356, 1573, 2092, 2171, 2686, 2968, 3072
PspFI	CCCAGC	2 cut(s)	1720, 1824
PspGI	CCWGG	9 cut(s)	253, 1173, 1356, 1573, 2092, 2171, 2686, 2968, 3072
PspPI	GGNCC	7 cut(s)	1178, 1622, 1703, 1882, 2050, 2175, 2279
PspPPI	RGGWCCY	1 cut(s)	1178
PstI	CTGCAG	1 cut(s)	2747
PstNI	CAGNNNCTG	1 cut(s)	2693
PsuI	RGATCY	2 cut(s)	2115, 2572
PvuII	CAGCTG	2 cut(s)	994, 2351
RseI	CAYNNNNRTG	4 cut(s)	657, 696, 1673, 2787
SacI	GAGCTC	1 cut(s)	957
SacII	CCGCGG	1 cut(s)	2958
SapI	GCTCTTC	1 cut(s)	1938
Sau96I	GGNCC	7 cut(s)	1178, 1622, 1703, 1882, 2050, 2175, 2279
ScaI	AGTACT	2 cut(s)	682, 980
SchI	GAGTC	5 cut(s)	409, 1048, 1258, 2119, 2409
ScrFI	CCNGG	9 cut(s)	255, 1175, 1358, 1575, 2094, 2173, 2688, 2970, 3074
SduI	GDGCHC	4 cut(s)	957, 2718, 2808, 2873
SfaNI	GCATC	3 cut(s)	1525, 2650, 3008
SfcI	CTRYAG	2 cut(s)	2743, 2923
Sfr303I	CCGCGG	1 cut(s)	2958
SgrBI	CCGCGG	1 cut(s)	2958
SinI	GGWCC	3 cut(s)	1178, 1622, 1882
SmiMI	CAYNNNNRTG	4 cut(s)	657, 696, 1673, 2787
SmlI	CTYRAG	2 cut(s)	956, 982
SmoI	CTYRAG	2 cut(s)	956, 982
SspMI	CTAG	5 cut(s)	1368, 1784, 1986, 2082, 2570
SstI	GAGCTC	1 cut(s)	957
StyD4I	CCNGG	9 cut(s)	253, 1173, 1356, 1573, 2092, 2171, 2686, 2968, 3072
StyI	CCWWGG	3 cut(s)	359, 1117, 2761
TaiI	ACGT	3 cut(s)	132, 2307, 2674
TaqI	TCGA	3 cut(s)	145, 409, 2435
TatI	WGTACW	4 cut(s)	680, 978, 1419, 2901
TfiI	GAWTC	7 cut(s)	241, 406, 1048, 1066, 1780, 2383, 2468
TseFI	GTSAC	8 cut(s)	859, 931, 1261, 1741, 1772, 2140, 2180, 2747
Tsp45I	GTSAC	8 cut(s)	859, 931, 1261, 1741, 1772, 2140, 2180, 2747
TspDTI	ATGAA	9 cut(s)	459, 767, 1055, 1202, 1685, 1885, 1974, 2574, 3082
TspGWI	ACGGA	2 cut(s)	552, 2965
Vha464I	CTTAAG	1 cut(s)	982
VneI	GTGCAC	2 cut(s)	2714, 2869
VpaK11BI	GGWCC	3 cut(s)	1178, 1622, 1882
XagI	CCTNNNNNAGG	2 cut(s)	1121, 2863
XapI	RAATTY	6 cut(s)	534, 806, 1097, 1189, 1481, 2437
XbaI	TCTAGA	1 cut(s)	2081
XceI	RCATGY	1 cut(s)	3068
XspI	CTAG	5 cut(s)	1368, 1784, 1986, 2082, 2570
ZrmI	AGTACT	2 cut(s)	682, 980

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.