Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0007187

Physical Location & Seq

Genomic Coordinates Forward (+)

22842214 .. 22846287

Gene Structure 4074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g19770.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3177 bp

ATGGAAAGAGGCGGTGGTAGCGGTGGATACAGAGGAAGGGGAATGGGAAGAGGGAGAGGCAGTGATGGTGGTGGTGGTGGTGGAAGGGGTGATCAGGGCGGGTATGGCAGAGGAAATGGAGGGAGAGGTGGAGGAGGTGGAGGAGAGAGAGGAAGAGGCGGTCATGGTGGCGAGCCACAGTTCCACCACCATCAGCCACAACAGCAGCAAGGACAGCCGAACCAGGATCGGAGTCAGCAAGCGAGGCCTAATCCATGGATTACTCCCGCTCCTGCCAGAGTATGGGGCCCCAGAGCGCCTGCTCCGCCTGCATCTCCGGCCGGACCGGCCCCGAACATCTCTCCTGCTCCTGATAATCTTGTTCCGGCAATGCAATCAATGGCAATTTCAAGACAGACACCCGCTTCATCTTCTTTACACAAGGCGGCCAATCTTGTCCCAGTAAAACGGCCTGATAATGGGGGCACAAAAGCTATCCGAACTGCTAGGCTTCGCGCTAATCATTTTAATCTCTCGTTCAATCCTGAAAGTATTATAATGCACTATGATGTTGATGTTAAACCGGAACACCCTGCTAAGAATGGCCGTCCTGTGAAGATATCAAAGTCTGAACTTTCTGCAATCAGGAACAAGTTATTCTCTGATGATCCTTCGAAATTTCCCTTGTTAAGTACTGCATATGATGGTGAAAAGAACATTTTCAGTGCAGTGTCGTTGCCCACTGGATCATTTAAGGTGGAGATTCCTGAGGAAGAAGGCACACGGTTTAGTTCGTACATTTTTACTATAAAGCTTGCGAAGGAGCTCCAGCTTCGCAAGTTGAAGGAGTACCTAAGCGGTCAGCTGTTGGATATCCCTCGTAATATATTGCAGAGTATGGATTTGGTTATGAAAGAGAATCCAGCTAGACGCATGATTGCTGTTGGGCGAAACTTTTACCCCACTGAATCTGATCCAAACGATGACCTTGGATATGGTGTTGCTGCCTTCAGAGGTTTTCAGCATAGCTTGAAGCTCACGTCCCAGGGTCCTACCTTGTGTCTCGATTATTCAGTCTTGGCATTTCATAAGCGCATGTCAGTTACAGAATTTCTCCAAGAGCAGATAAGGGGTTTTACATTAAATAATTTCAAGAGGTTTAGGAGGGAGGTTGAGGATGTATTGAAGGGATTGAAAGTTACTGTGACTCACCGGAAAACCAAGCAAACGTACGTCATCATGGGGCTGACTGATAAGAATGCAGGAGAAATTACATTTGATGCTGTAGACATAGATGGCCAGATTCCACCAAGGAAAGTTAGACTTCCTGATTATTTCAGGGACAAATACAGAGAGATTCAGTACAAAAACATTCCCTGCTTGGATTTAGGGAAAAATGGTAAAAGGAATGATACACCAATGGAGTTCTGTGTCTTAGTTGAGGGGCAAAGGTATCCAAAGGAATCTTTGGGCAAAGAAGCAGCCATCATGCTGAAGAACATCTCATTGCCTTCACCAAGAGATAGACAGAACATGATATCCAACATGGTACGATCAAAAGATGGACCTTCCGGTGGTGGCATCATTCGGAATTTTGGATTTGAGGTCAACCAGAATATGACACCAGTGACAGGGCGTGTGATTGTCCCACCTGAGTTGAAGTTGGGTGCTTCTGATGGCAAGGTGATTAAGGTGACTGTTGACGGAGAGAAATGTCAATGGAATCTGGTTGGGAAGACTCTCGTGGAAGGAAAACCAATCAAGTGCTGGGCCGTACTTGACTTCAGCAGTTCTGATCGTTTCAAACTGGACCCTAACCAGTTCATCCCAAAGCTCATCGCTCGGTGCAACAGACTGGGAATCAGAATGGGAGAGCCTGTTTTGTATGAAACCACTTCAATGAGGCCATTCTCTAGTGTTCAGATGCTTCGTCCGCTGCTTGAAAGCGTTAATGAGAAGGCTAAAAAAGAAGGCAATGGCTACTTGCAGTTACTTGTTTGTGTAATGTCTAAAAGAGACCCTGGTTACAAGCATCTGAAGTGGATTGCTGAGACTCAAATCGGTATAGTGACGCAATGCTGCTTGTCAAATATGGCCAACAAAGCAAATGACCAGTACCTTGCAAATCTTGCACTCAAGATCAATGCGAAGAAAGGAGGCAGTAATGTAGAGCTAAATGATCGGCTCCCCCTTGTAGGGAATGCAGGCCATGTTATGTTTGTGGGGGCCGATGTCAATCATCCTGCTGCGCGAAACACAACAAGTCCATCAATTGCAGCAGTTGTTGCCACTTTAAACTGGCCTGCTGCGAATCGTTATGCTGCACGAGTTCGATCCCAGTACCATCGTGTGGAGAAGATATTGAATTTTGGAGACATGTGTCTGGAGCTTGTTGAATCTTATGAGCGATTCAGTAAAGTCAAGCCAGAGAAAATTATTATCTTCCGTGATGGAGTTAGTGAGGGCCAGTTTGATATGGTTCTCAATGAAGAGTTGCTAGATCTGGAGATGGCTTTCGAAAGTATAAAATACCATCCAACCATCACACTTATTGTTGCCCAGAAGCGGCACCATACTCGTCTATTTCTGGAGAATCCAAGGGATGGGGGTTCCGCAGGCAACATATCACCGGGAACTGTTGTGGACACAACAATCGTGCACCCGTTTGAGTTTGACTTCTATCTTTGCAGTCATTATGGAGCCCTTGGAACAAGCAAACCCACACACTACCATGTTCTTCGGGACGATCATCGGTTTACTTCAGATCAATTACAGAAGCTTATATATGACTTGTGCTTCACCTTTGCAAGATGTACAAAACCTGTATCATTGGTCCCACCGGTGTACTATGCTGACCTCGTGGCATATAGGGGGCGATTATACTACGAGAGTACGGAGGGACAGTCTCCAGCTTCAGTATCCTCCTCGTCCTCGTCCTTGACATATTCACCGCTGTCAGTGGCTTCTCTTGATCAAAGGTTCTGCAAATTGCACGCGGACTTGGAAAACATGATGTTTTTCGGTTATGGTTCCGTAAGTTGGCAAACCCGTTTGCATTTCCAACCTCCTGAAAAGGAGTTTGTGCGTGAATCTAATGGGTTTCTGTGTCGTAATGTTATGTGTAGCGTTTTCTCTACTTCATACGTTCTGTGCTCATATGTCGTTTCGAATCATTTTGTGGATCTAAATCAGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0016032 GO:0019048 GO:0035197 GO:0035821 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0061980 GO:0097159 GO:0098542 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

1059

Amino Acids

117.67

Weight (kDa)

9.33

Isoelectric Point (pI)

39.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31280 AT1G31290 AT1G31290 AT1G31290
fragaria_vesca	FvH4_3g11980
malus_domestica	MD05G1256100.v1.1 MD10G1236300.v1.1 MD10G1236400.v1.1
prunus_persica	Prupe.4G108000_v2.0.a1 Prupe.4G108100_v2.0.a1
pyrus_communis	pycom05g23500 pycom05g23510 pycom05g23520 pycom10g19770 pycom10g19780
rosa_chinensis	RchiOBHm_Chr5g0019581
rosa_laevigata	RLG00000032457
rosa_roxburghii	Rroxscaffold_1G00058500
rosa_rugosa	Rorug05G0052100 Rorug05G0052200
rosa_samantha	Rh5AG142700 Rh5BG141200 Rh5CG153300 Rh5DG141900
rosa_wichuraiana	Rw5G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	536
AccB1I	GGYRCC	1 cut(s)	2547
AccB7I	CCANNNNNTGG	3 cut(s)	282, 2329, 2582
AccBSI	CCGCTC	1 cut(s)	269
AccI	GTMKAC	1 cut(s)	1266
AccII	CGCG	3 cut(s)	495, 2230, 2975
AclWI	GGATC	6 cut(s)	234, 641, 733, 947, 2307, 3168
AcoI	YGGCCR	5 cut(s)	318, 426, 583, 1276, 2073
AcsI	RAATTY	4 cut(s)	656, 1088, 1570, 2344
AcuI	CTGAAG	6 cut(s)	973, 1493, 1747, 2036, 2724, 2877
AflIII	ACRYGT	1 cut(s)	2355
AgeI	ACCGGT	1 cut(s)	2818
AjiI	CACGTC	1 cut(s)	1020
AjnI	CCWGG	3 cut(s)	222, 1023, 1999
AloI	GAACNNNNNNTCC	2 cut(s)	1502, 1534
Alw21I	GWGCWC	3 cut(s)	807, 2640, 3134
Alw26I	GTCTC	5 cut(s)	1046, 1989, 2024, 2346, 2889
Alw44I	GTGCAC	1 cut(s)	2636
AlwI	GGATC	6 cut(s)	234, 641, 733, 947, 2307, 3168
ApaI	GGGCCC	1 cut(s)	290
ApaLI	GTGCAC	1 cut(s)	2636
ApeKI	GCWGC	9 cut(s)	205, 983, 1460, 1915, 2058, 2225, 2255, 2285, 2300
ApoI	RAATTY	4 cut(s)	656, 1088, 1570, 2344
AsiGI	ACCGGT	1 cut(s)	2818
Asp700I	GAANNNNTTC	1 cut(s)	698
AspLEI	GCGC	4 cut(s)	298, 497, 1074, 2230
AsuC2I	CCSGG	1 cut(s)	2610
AsuHPI	GGTGA	9 cut(s)	101, 698, 1181, 1485, 1675, 1684, 2598, 2770, 2919
AsuII	TTCGAA	3 cut(s)	653, 2496, 3146
AvaII	GGWCC	5 cut(s)	323, 1028, 1544, 1789, 2812
AxyI	CCTNAGG	1 cut(s)	747
BaeGI	GKGCMC	3 cut(s)	290, 467, 2640
BalI	TGGCCA	2 cut(s)	1278, 2075
BanI	GGYRCC	1 cut(s)	2547
BanII	GRGCYC	3 cut(s)	290, 807, 2683
BauI	CACGAG	3 cut(s)	1721, 2304, 2837
BbsI	GAAGAC	1 cut(s)	1721
Bbv12I	GWGCWC	3 cut(s)	807, 2640, 3134
BbvI	GCAGC	9 cut(s)	217, 970, 1472, 1902, 2045, 2212, 2267, 2272, 2287
BceAI	ACGGC	3 cut(s)	464, 570, 1736
BcgI	CGANNNNNNTGC	2 cut(s)	2537, 2571
BciT130I	CCWGG	3 cut(s)	224, 1025, 2001
BciVI	GTATCC	3 cut(s)	20, 1443, 2908
BclI	TGATCA	2 cut(s)	91, 2950
BcnI	CCSGG	1 cut(s)	2610
BcoDI	GTCTC	5 cut(s)	1046, 1989, 2024, 2346, 2889
BfaI	CTAG	4 cut(s)	486, 906, 1893, 2477
BfmI	CTRYAG	1 cut(s)	1263
BfoI	RGCGCY	1 cut(s)	299
BfuI	GTATCC	3 cut(s)	20, 1443, 2908
BglI	GCCNNNNNGGC	1 cut(s)	326
BglII	AGATCT	1 cut(s)	2479
BmcAI	AGTACT	1 cut(s)	673
Bme1390I	CCNGG	4 cut(s)	224, 1025, 2001, 2610
Bme18I	GGWCC	5 cut(s)	323, 1028, 1544, 1789, 2812
BmgBI	CACGTC	1 cut(s)	1020
BmrFI	CCNGG	4 cut(s)	224, 1025, 2001, 2610
BmrI	ACTGGG	3 cut(s)	434, 1844, 2311
BmsI	GCATC	5 cut(s)	320, 1249, 1569, 1893, 2020
BmuI	ACTGGG	3 cut(s)	434, 1844, 2311
BoxI	GACNNNNGTC	1 cut(s)	2358
BpiI	GAAGAC	1 cut(s)	1721
BpmI	CTGGAG	5 cut(s)	791, 2384, 2504, 2588, 2871
Bpu10I	CCTNAGC	1 cut(s)	833
Bpu14I	TTCGAA	3 cut(s)	653, 2496, 3146
BpuEI	CTTGAG	1 cut(s)	2099
BpuMI	CCSGG	1 cut(s)	2610
BsaBI	GATNNNNATC	2 cut(s)	2214, 3165
BsaI	GGTCTC	1 cut(s)	1989
BsaJI	CCNNGG	8 cut(s)	254, 967, 1023, 1024, 1289, 1999, 2576, 2683
BsaWI	WCCGGW	4 cut(s)	562, 1191, 1550, 2818
BsaXI	ACNNNNNCTCC	8 cut(s)	46, 76, 253, 283, 1842, 1872, 2867, 2897
Bse118I	RCCGGY	2 cut(s)	325, 2818
Bse21I	CCTNAGG	1 cut(s)	747
Bse3DI	GCAATG	4 cut(s)	375, 1484, 1960, 2060
Bse8I	GATNNNNATC	2 cut(s)	2214, 3165
BseBI	CCWGG	3 cut(s)	224, 1025, 2001
BseDI	CCNNGG	8 cut(s)	254, 967, 1023, 1024, 1289, 1999, 2576, 2683
BseGI	GGATG	5 cut(s)	1162, 1803, 2218, 2512, 2587
BseJI	GATNNNNATC	2 cut(s)	2214, 3165
BseMI	GCAATG	4 cut(s)	375, 1484, 1960, 2060
BseMII	CTCAG	3 cut(s)	738, 1623, 2019
BseRI	GAGGAG	3 cut(s)	147, 156, 2893
BseSI	GKGCMC	3 cut(s)	290, 467, 2640
BseX3I	CGGCCG	1 cut(s)	318
BseXI	GCAGC	9 cut(s)	217, 970, 1472, 1902, 2045, 2212, 2267, 2272, 2287
BseYI	CCCAGC	1 cut(s)	1746
BsgI	GTGCAG	2 cut(s)	726, 2286
Bsh1236I	CGCG	3 cut(s)	495, 2230, 2975
Bsh1285I	CGRYCG	1 cut(s)	321
BshNI	GGYRCC	1 cut(s)	2547
BshTI	ACCGGT	1 cut(s)	2818
BsiEI	CGRYCG	1 cut(s)	321
BsiHKAI	GWGCWC	3 cut(s)	807, 2640, 3134
BsiSI	CCGG	9 cut(s)	317, 321, 326, 365, 563, 1192, 1551, 2609, 2819
BsiWI	CGTACG	1 cut(s)	1209
BslFI	GGGAC	7 cut(s)	422, 1006, 1334, 1610, 2735, 2798, 2892
BsmAI	GTCTC	5 cut(s)	1046, 1989, 2024, 2346, 2889
BsmFI	GGGAC	7 cut(s)	422, 1006, 1334, 1610, 2735, 2798, 2892
BsmI	GAATGC	2 cut(s)	1243, 2185
Bso31I	GGTCTC	1 cut(s)	1989
Bsp119I	TTCGAA	3 cut(s)	653, 2496, 3146
Bsp120I	GGGCCC	1 cut(s)	286
Bsp1286I	GDGCHC	6 cut(s)	290, 467, 807, 2640, 2683, 3134
Bsp1407I	TGTACA	1 cut(s)	2792
Bsp19I	CCATGG	1 cut(s)	254
BspCNI	CTCAG	3 cut(s)	739, 1624, 2020
BspFNI	CGCG	3 cut(s)	495, 2230, 2975
BspPI	GGATC	6 cut(s)	234, 641, 733, 947, 2307, 3168
BspT104I	TTCGAA	3 cut(s)	653, 2496, 3146
BspT107I	GGYRCC	1 cut(s)	2547
BspTNI	GGTCTC	1 cut(s)	1989
BsrBI	CCGCTC	1 cut(s)	269
BsrDI	GCAATG	4 cut(s)	375, 1484, 1960, 2060
BsrFI	RCCGGY	2 cut(s)	325, 2818
BsrGI	TGTACA	1 cut(s)	2792
BssAI	RCCGGY	2 cut(s)	325, 2818
BssECI	CCNNGG	8 cut(s)	254, 967, 1023, 1024, 1289, 1999, 2576, 2683
BssSI	CACGAG	3 cut(s)	1721, 2304, 2837
BssT1I	CCWWGG	5 cut(s)	254, 967, 1289, 2576, 2683
Bst2BI	CACGAG	3 cut(s)	1721, 2304, 2837
Bst2UI	CCWGG	3 cut(s)	224, 1025, 2001
Bst4CI	ACNGT	6 cut(s)	180, 765, 1183, 1678, 2617, 2883
Bst6I	CTCTTC	3 cut(s)	43, 148, 2463
BstAPI	GCANNNNNTGC	2 cut(s)	2108, 2264
BstAUI	TGTACA	1 cut(s)	2792
BstBI	TTCGAA	3 cut(s)	653, 2496, 3146
BstC8I	GCNNGC	9 cut(s)	173, 240, 300, 309, 795, 2185, 2283, 2596, 2973
BstDEI	CTNAG	6 cut(s)	576, 747, 833, 1414, 1632, 2028
BstDSI	CCRYGG	1 cut(s)	254
BstF5I	GGATG	5 cut(s)	1162, 1803, 2218, 2512, 2587
BstFNI	CGCG	3 cut(s)	495, 2230, 2975
BstH2I	RGCGCY	1 cut(s)	299
BstHHI	GCGC	4 cut(s)	298, 497, 1074, 2230
BstMAI	GTCTC	5 cut(s)	1046, 1989, 2024, 2346, 2889
BstMCI	CGRYCG	1 cut(s)	321
BstNI	CCWGG	3 cut(s)	224, 1025, 2001
BstNSI	RCATGY	2 cut(s)	1078, 2359
BstPAI	GACNNNNGTC	1 cut(s)	2358
BstSCI	CCNGG	4 cut(s)	222, 1023, 1999, 2608
BstSFI	CTRYAG	1 cut(s)	1263
BstSLI	GKGCMC	3 cut(s)	290, 467, 2640
BstUI	CGCG	3 cut(s)	495, 2230, 2975
BstV1I	GCAGC	9 cut(s)	217, 970, 1472, 1902, 2045, 2212, 2267, 2272, 2287
BstV2I	GAAGAC	1 cut(s)	1721
BstX2I	RGATCY	2 cut(s)	2479, 3160
BstYI	RGATCY	2 cut(s)	2479, 3160
BstZI	CGGCCG	1 cut(s)	318
Bsu36I	CCTNAGG	1 cut(s)	747
BsuI	GTATCC	3 cut(s)	20, 1443, 2908
BtgI	CCRYGG	1 cut(s)	254
BtgZI	GCGATG	1 cut(s)	1801
BtrI	CACGTC	1 cut(s)	1020
BtsCI	GGATG	5 cut(s)	1162, 1803, 2218, 2512, 2587
BtsI	GCAGTG	2 cut(s)	67, 714
BtsIMutI	CAGTG	8 cut(s)	67, 709, 714, 720, 942, 1611, 2943, 3176
Cac8I	GCNNGC	9 cut(s)	173, 240, 300, 309, 795, 2185, 2283, 2596, 2973
CfoI	GCGC	4 cut(s)	298, 497, 1074, 2230
Cfr10I	RCCGGY	2 cut(s)	325, 2818
CpoI	CGGWCCG	1 cut(s)	323
CseI	GACGC	2 cut(s)	918, 2059
CspAI	ACCGGT	1 cut(s)	2818
CspCI	CAANNNNNGTGG	2 cut(s)	1617, 1652
CspI	CGGWCCG	1 cut(s)	323
DdeI	CTNAG	6 cut(s)	576, 747, 833, 1414, 1632, 2028
DraI	TTTAAA	1 cut(s)	2274
EaeI	YGGCCR	5 cut(s)	318, 426, 583, 1276, 2073
EagI	CGGCCG	1 cut(s)	318
Eam1104I	CTCTTC	3 cut(s)	43, 148, 2463
EarI	CTCTTC	3 cut(s)	43, 148, 2463
EciI	GGCGGA	1 cut(s)	294
Ecl136II	GAGCTC	1 cut(s)	805
EclXI	CGGCCG	1 cut(s)	318
Eco130I	CCWWGG	5 cut(s)	254, 967, 1289, 2576, 2683
Eco147I	AGGCCT	1 cut(s)	247
Eco24I	GRGCYC	3 cut(s)	290, 807, 2683
Eco31I	GGTCTC	1 cut(s)	1989
Eco32I	GATATC	3 cut(s)	600, 853, 1518
Eco47I	GGWCC	5 cut(s)	323, 1028, 1544, 1789, 2812
Eco52I	CGGCCG	1 cut(s)	318
Eco53kI	GAGCTC	1 cut(s)	805
Eco57I	CTGAAG	6 cut(s)	973, 1493, 1747, 2036, 2724, 2877
Eco81I	CCTNAGG	1 cut(s)	747
EcoICRI	GAGCTC	1 cut(s)	805
EcoO109I	RGGNCCY	3 cut(s)	286, 287, 1028
EcoRII	CCWGG	3 cut(s)	222, 1023, 1999
EcoRV	GATATC	3 cut(s)	600, 853, 1518
EcoT14I	CCWWGG	5 cut(s)	254, 967, 1289, 2576, 2683
EcoT38I	GRGCYC	3 cut(s)	290, 807, 2683
ErhI	CCWWGG	5 cut(s)	254, 967, 1289, 2576, 2683
FalI	AAGNNNNNCTT	2 cut(s)	1287, 1319
FaqI	GGGAC	7 cut(s)	422, 1006, 1334, 1610, 2735, 2798, 2892
FauI	CCCGC	3 cut(s)	92, 274, 409
FauNDI	CATATG	2 cut(s)	679, 3136
FbaI	TGATCA	2 cut(s)	91, 2950
FblI	GTMKAC	1 cut(s)	1266
FokI	GGATG	5 cut(s)	1169, 1790, 2205, 2499, 2594
FriOI	GRGCYC	3 cut(s)	290, 807, 2683
FspBI	CTAG	4 cut(s)	486, 906, 1893, 2477
GlaI	GCGC	4 cut(s)	297, 496, 1073, 2229
GsaI	CCCAGC	1 cut(s)	1750
GsuI	CTGGAG	5 cut(s)	791, 2384, 2504, 2588, 2871
HaeII	RGCGCY	1 cut(s)	299
HapII	CCGG	9 cut(s)	317, 321, 326, 365, 563, 1192, 1551, 2609, 2819
HgaI	GACGC	2 cut(s)	918, 2059
HhaI	GCGC	4 cut(s)	298, 497, 1074, 2230
Hin6I	GCGC	4 cut(s)	296, 495, 1072, 2228
HinP1I	GCGC	4 cut(s)	296, 495, 1072, 2228
HincII	GTYRAC	2 cut(s)	1588, 1681
HindII	GTYRAC	2 cut(s)	1588, 1681
HindIII	AAGCTT	2 cut(s)	791, 2756
HpaII	CCGG	9 cut(s)	317, 321, 326, 365, 563, 1192, 1551, 2609, 2819
HphI	GGTGA	9 cut(s)	101, 698, 1181, 1485, 1675, 1684, 2598, 2770, 2919
Hpy166II	GTNNAC	7 cut(s)	1267, 1588, 1681, 2623, 2638, 2736, 2824
Hpy8I	GTNNAC	7 cut(s)	1267, 1588, 1681, 2623, 2638, 2736, 2824
HpyCH4III	ACNGT	6 cut(s)	180, 765, 1183, 1678, 2617, 2883
HpyCH4IV	ACGT	4 cut(s)	1019, 1208, 1212, 3123
HpyF3I	CTNAG	6 cut(s)	576, 747, 833, 1414, 1632, 2028
HpySE526I	ACGT	4 cut(s)	1019, 1208, 1212, 3123
HspAI	GCGC	4 cut(s)	296, 495, 1072, 2228
Ksp22I	TGATCA	2 cut(s)	91, 2950
LmnI	GCTCC	8 cut(s)	274, 307, 352, 802, 810, 2169, 2365, 2678
Lsp1109I	GCAGC	9 cut(s)	217, 970, 1472, 1902, 2045, 2212, 2267, 2272, 2287
LweI	GCATC	5 cut(s)	320, 1249, 1569, 1893, 2020
MaeI	CTAG	4 cut(s)	486, 906, 1893, 2477
MaeII	ACGT	4 cut(s)	1019, 1208, 1212, 3123
MaeIII	GTNAC	8 cut(s)	1081, 1177, 1183, 1606, 1672, 1968, 2003, 2047
MbiI	CCGCTC	1 cut(s)	269
MfeI	CAATTG	1 cut(s)	2250
MflI	RGATCY	2 cut(s)	2479, 3160
MhlI	GDGCHC	6 cut(s)	290, 467, 807, 2640, 2683, 3134
MlsI	TGGCCA	2 cut(s)	1278, 2075
MluNI	TGGCCA	2 cut(s)	1278, 2075
MlyI	GAGTC	4 cut(s)	241, 1180, 1711, 2026
MmeI	TCCRAC	4 cut(s)	828, 1545, 2540, 3064
Mox20I	TGGCCA	2 cut(s)	1278, 2075
MroXI	GAANNNNTTC	1 cut(s)	698
MscI	TGGCCA	2 cut(s)	1278, 2075
MseI	TTAA	8 cut(s)	507, 558, 668, 732, 1121, 1668, 1929, 2273
MslI	CAYNNNNRTG	3 cut(s)	546, 1877, 2709
Msp20I	TGGCCA	2 cut(s)	1278, 2075
MspA1I	CMGCKG	3 cut(s)	844, 1915, 2932
MspI	CCGG	9 cut(s)	317, 321, 326, 365, 563, 1192, 1551, 2609, 2819
MspR9I	CCNGG	4 cut(s)	224, 1025, 2001, 2610
MunI	CAATTG	1 cut(s)	2250
Mva1269I	GAATGC	2 cut(s)	1243, 2185
MvaI	CCWGG	3 cut(s)	224, 1025, 2001
MvnI	CGCG	3 cut(s)	495, 2230, 2975
NciI	CCSGG	1 cut(s)	2610
NcoI	CCATGG	1 cut(s)	254
NdeI	CATATG	2 cut(s)	679, 3136
NmuCI	GTSAC	4 cut(s)	1183, 1606, 1672, 2047
NspI	RCATGY	2 cut(s)	1078, 2359
NspV	TTCGAA	3 cut(s)	653, 2496, 3146
PasI	CCCWGGG	1 cut(s)	1024
PceI	AGGCCT	1 cut(s)	247
PciI	ACATGT	1 cut(s)	2355
PctI	GAATGC	2 cut(s)	1243, 2185
PdmI	GAANNNNTTC	1 cut(s)	698
Pfl23II	CGTACG	1 cut(s)	1209
PflMI	CCANNNNNTGG	3 cut(s)	282, 2329, 2582
PinAI	ACCGGT	1 cut(s)	2818
PleI	GAGTC	4 cut(s)	240, 1180, 1711, 2026
PpsI	GAGTC	4 cut(s)	240, 1180, 1711, 2026
PpuMI	RGGWCCY	1 cut(s)	1028
PscI	ACATGT	1 cut(s)	2355
PshAI	GACNNNNGTC	1 cut(s)	2358
PsiI	TTATAA	1 cut(s)	536
Psp124BI	GAGCTC	1 cut(s)	807
Psp5II	RGGWCCY	1 cut(s)	1028
Psp6I	CCWGG	3 cut(s)	222, 1023, 1999
PspFI	CCCAGC	1 cut(s)	1746
PspGI	CCWGG	3 cut(s)	222, 1023, 1999
PspLI	CGTACG	1 cut(s)	1209
PspOMI	GGGCCC	1 cut(s)	286
PspPPI	RGGWCCY	1 cut(s)	1028
PsuI	RGATCY	2 cut(s)	2479, 3160
PvuII	CAGCTG	1 cut(s)	844
RseI	CAYNNNNRTG	3 cut(s)	546, 1877, 2709
Rsr2I	CGGWCCG	1 cut(s)	323
RsrII	CGGWCCG	1 cut(s)	323
SacI	GAGCTC	1 cut(s)	807
SaqAI	TTAA	8 cut(s)	507, 558, 668, 732, 1121, 1668, 1929, 2273
ScaI	AGTACT	1 cut(s)	673
SchI	GAGTC	4 cut(s)	241, 1180, 1711, 2026
ScrFI	CCNGG	4 cut(s)	224, 1025, 2001, 2610
SduI	GDGCHC	6 cut(s)	290, 467, 807, 2640, 2683, 3134
SfaNI	GCATC	5 cut(s)	320, 1249, 1569, 1893, 2020
SfcI	CTRYAG	1 cut(s)	1263
SfiI	GGCCNNNNNGGCC	1 cut(s)	326
SfuI	TTCGAA	3 cut(s)	653, 2496, 3146
SgrAI	CRCCGGYG	1 cut(s)	2818
SinI	GGWCC	5 cut(s)	323, 1028, 1544, 1789, 2812
SmiMI	CAYNNNNRTG	3 cut(s)	546, 1877, 2709
SmlI	CTYRAG	1 cut(s)	2114
SmoI	CTYRAG	1 cut(s)	2114
SseBI	AGGCCT	1 cut(s)	247
SspMI	CTAG	4 cut(s)	486, 906, 1893, 2477
SstI	GAGCTC	1 cut(s)	807
StuI	AGGCCT	1 cut(s)	247
StyD4I	CCNGG	4 cut(s)	222, 1023, 1999, 2608
StyI	CCWWGG	5 cut(s)	254, 967, 1289, 2576, 2683
TaaI	ACNGT	6 cut(s)	180, 765, 1183, 1678, 2617, 2883
TaiI	ACGT	4 cut(s)	1022, 1211, 1215, 3126
TaqI	TCGA	5 cut(s)	653, 1044, 2311, 2496, 3146
TatI	WGTACW	4 cut(s)	671, 1341, 2792, 2823
TauI	GCSGC	2 cut(s)	428, 2548
Tru1I	TTAA	8 cut(s)	507, 558, 668, 732, 1121, 1668, 1929, 2273
Tru9I	TTAA	8 cut(s)	507, 558, 668, 732, 1121, 1668, 1929, 2273
TscAI	CASTG	8 cut(s)	67, 709, 714, 727, 949, 1611, 2943, 3176
TseFI	GTSAC	4 cut(s)	1183, 1606, 1672, 2047
TseI	GCWGC	9 cut(s)	205, 983, 1460, 1915, 2058, 2225, 2255, 2285, 2300
Tsp45I	GTSAC	4 cut(s)	1183, 1606, 1672, 2047
TspDTI	ATGAA	7 cut(s)	396, 905, 1055, 1792, 1881, 2481, 3108
TspGWI	ACGGA	4 cut(s)	1698, 2414, 2888, 3001
TspRI	CASTG	8 cut(s)	67, 709, 714, 727, 949, 1611, 2943, 3176
Van91I	CCANNNNNTGG	3 cut(s)	282, 2329, 2582
VneI	GTGCAC	1 cut(s)	2636
VpaK11BI	GGWCC	5 cut(s)	323, 1028, 1544, 1789, 2812
XapI	RAATTY	4 cut(s)	656, 1088, 1570, 2344
XceI	RCATGY	2 cut(s)	1078, 2359
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1743
XmiI	GTMKAC	1 cut(s)	1266
XmnI	GAANNNNTTC	1 cut(s)	698
XspI	CTAG	4 cut(s)	486, 906, 1893, 2477
ZrmI	AGTACT	1 cut(s)	673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.