Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002657

Physical Location & Seq

Genomic Coordinates Forward (+)

18416474 .. 18420111

Gene Structure 3638 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G49760.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGGCTCAGATTCAGCATCAGGGTCAAAATGCCAATGGTGGTGTAGCTGTTCCCGGTGCTGCTGCGGCTGAAGCTGCGGCGGCTGCGGCTGGAGCTGCGGCGGCGGCTGCCGGAGCTGCGCAGCAAGGGACGACGTCTTTATATGTCGGTGATCTGGATGCGACCGTGACGGATTCACAGCTGTTTGAGGCGTTTACCCAAGCGGGTCAGGTGGTTTCTGTCCGTGTCTGCAGAGACATGACGACTCGGAGATCTCTAGGCTATGGCTACGTTAACTATGCAACTCCTCAAGATGCTTCCAGGGCACTGAATGAGCTGAATTTCATGGCTCTTAATGGAAGGGCTATAAGAGTTATGTATTCTGTTCGTGATCCAAGTCTCCGTAAGAGCGGAGTTGGTAATATATTTATTAAGAATCTTGACAAATCAATTGATCACAAAGCACTTCACGAGACATTTTCAGCCTTTGGTCCCATTCTATCTTGCAAAGTGGCCGTTGATCCCTCTGGTCAGTCGAAAGGCTATGGGTTTGTGCAGTACGACACTGATGAAGCAGCTCAGGGAGCCATTGATAAACTGAATGGAATGCTTCTTAACGATAAGCAAGTTTATGTTGGACCCTTTGTTCACAAGCTGCAGAGAGATCCTTCGGGTGAGAAAGTTAAGTTCACTAATGTTTATGTCAAAAATCTCTCCGAGTCCTTGAGTGATGAAGAGCTTAACAAAGTTTTTGGAGAGTTCGGAGTGACTACTAGTTGTGTTATCATGAGAGATGGTGAAGGAAAGTCTAAAGGCTTTGGATTTGTCAATTTTGAGAATTCTGATGATGCAGCCAGAGCTGTTGACGCTCTAAATGGAAAGACCTTTGACGACAAGGAGTGGTTTGTTGGGAAGGCCCAAAAGAAGTCCGAGAGGGAAACTGAACTCAAACAAAAGTTTGAGCAAAGTTTGAAGGAGGCTGCAGACAAGTCTCAGGGGTCGAACTTATATGTTAAGAACTTGGATGAGAGCGTCACAGATGATAAGCTCAGAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGATGCGTGACCCCAGTGGAGTGAGTAGAGGATCTGGATTTGTCGCATTTTCAACTCCTGAGGAAGCAACTAGAGCTATTACAGAGATGAATGGAAAAATGATCGTTACCAAACCTCTATATGTTGCTCTTGCGCAGCGGAAAGAAGACCGCAAAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCGGTCAATATGCCACCTGCGGTTGGTCCTAGGATGCAAATGTATCCACCAGGTGGTCCACCAATGGGTCAGCAACTCTTCTATGGTCAAGGGCCTCCTGCTATGATTCCTCAGCCTGGATTCGGATATCAACAACAGCTTGTACCGGGTATGAGACCTGGTGGGTCTCCAATGCCAAACTTCTTCATGCCTATGATGCAACAAGGCCAGCAACAGCAACAGCAGCAACAGCAGCAGCAGCGACCTGGTGGTGGTAGAAGAGGAGCTCTTCCACAACCACAACAACCTTCTCCTATGATGCAGCAGCAGATGCATCCAAGAGGTCGAATGTATCGGTATCCTCAGCGAGATGTAAACACAATGCCTGGTCCTACTCAAAACATGCTTTCTGTTCCATATGACGTCTCAAGTGGTGGTGGTGTGCATCATCGTGACTCGCCTACTTCTCAACCTGTTCCTATTGTAGCTTTGGCTACACGGCTTGCGAATGCAGCTCCAGAGCAACAGAGAACGATGCTTGGTGAGAATCTATACCCGCTTGTGGAGCAGCTGGAGCCAGAATCCGCAGCTAAAGTCACGGGAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCACCAGAGGCACTTAAAGCTAAAGTTACAGAAGCAATGGATGTTCTGAGGAGTGTAGCACAGCAGCAAGCGGGTGGTGCAGCTGATCAGTTAGCTTCTCTGTCTCTTGGAGACAACATCGTACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0008150 GO:0010035 GO:0010038 GO:0042221 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

671

Amino Acids

72.78

Weight (kDa)

7.13

Isoelectric Point (pI)

43.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	47 - 117	1.3e-17	RNA recognition motif
RRM_1	PF00076	135 - 203	5.9e-20	RNA recognition motif
RRM_1	PF00076	226 - 293	1.1e-22	RNA recognition motif
RRM_1	PF00076	329 - 396	6.8e-21	RNA recognition motif
MLLE	PF00658	581 - 645	1.3e-29	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49760 AT1G49760 AT4G34110
fragaria_vesca	FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g34040 FvH4_2g34040 FvH4_2g34040 FvH4_6g37220
malus_domestica	MD00G1138300.v1.1 MD05G1085100.v1.1 MD08G1096400.v1.1 MD15G1079100.v1.1
prunus_persica	Prupe.1G432200_v2.0.a1 Prupe.1G432200_v2.0.a1 Prupe.8G129400_v2.0.a1 Prupe.8G129400_v2.0.a1
pyrus_communis	pycom05g08430 pycom08g07840 pycom10g07970 pycom15g07370
rosa_chinensis	RchiOBHm_Chr6g0256591 RchiOBHm_Chr6g0308331
rosa_laevigata	RLG00000010649 RLG00000014752
rosa_multiflora	Rmu_sc0003012.1_g000007
rosa_roxburghii	Rroxscaffold_7G00160250 Rroxscaffold_7G00209190
rosa_rugosa	Rorug05G0564800 Rorug06G0366200 Rorug06G0366200
rosa_samantha	Rh6AG082800 Rh6AG475400 Rh6BG077400 Rh6CG072000 Rh6DG477300
rosa_wichuraiana	Rw6G007450 Rw6G041440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1285
AatII	GACGTC	2 cut(s)	137, 1665
Acc16I	TGCGCA	2 cut(s)	120, 1206
Acc36I	ACCTGC	1 cut(s)	1285
AccB7I	CCANNNNNTGG	1 cut(s)	1313
AccBSI	CCGCTC	1 cut(s)	390
AclWI	GGATC	4 cut(s)	365, 494, 638, 1111
AcoI	YGGCCR	1 cut(s)	492
AcsI	RAATTY	2 cut(s)	319, 817
AcuI	CTGAAG	1 cut(s)	90
AcyI	GRCGYC	2 cut(s)	134, 1662
AdeI	CACNNNGTG	1 cut(s)	1313
AfaI	GTAC	4 cut(s)	539, 1404, 1872, 2010
AfiI	CCNNNNNNNGG	7 cut(s)	1283, 1313, 1325, 1376, 1382, 1511, 1801
AgsI	TTSAA	3 cut(s)	952, 1125, 1853
AhlI	ACTAGT	1 cut(s)	752
AjnI	CCWGG	6 cut(s)	299, 1309, 1375, 1417, 1504, 1624
AloI	GAACNNNNNNTCC	2 cut(s)	609, 641
Alw21I	GWGCWC	1 cut(s)	1528
Alw26I	GTCTC	9 cut(s)	228, 383, 446, 975, 1408, 1431, 1669, 1992, 1995
AlwI	GGATC	4 cut(s)	365, 494, 638, 1111
AoxI	GGCC	5 cut(s)	492, 894, 1259, 1352, 1465
ApoI	RAATTY	2 cut(s)	319, 817
Asp700I	GAANNNNTTC	1 cut(s)	1872
AspA2I	CCTAGG	1 cut(s)	1289
AspLEI	GCGC	2 cut(s)	121, 1207
AspS9I	GGNCC	8 cut(s)	470, 617, 895, 1286, 1316, 1352, 1628, 1858
AsuC2I	CCSGG	2 cut(s)	54, 1407
AsuHPI	GGTGA	6 cut(s)	161, 665, 788, 1084, 1793, 1881
AvaII	GGWCC	6 cut(s)	470, 617, 1286, 1316, 1628, 1858
AvrII	CCTAGG	1 cut(s)	1289
AxyI	CCTNAGG	1 cut(s)	1131
BaeGI	GKGCMC	1 cut(s)	307
BanII	GRGCYC	1 cut(s)	1528
BauI	CACGAG	1 cut(s)	449
BbsI	GAAGAC	1 cut(s)	1224
Bbv12I	GWGCWC	1 cut(s)	1528
BbvCI	CCTCAGC	2 cut(s)	1371, 1602
BccI	CCATC	1 cut(s)	767
BceAI	ACGGC	2 cut(s)	479, 1754
BciT130I	CCWGG	6 cut(s)	301, 1311, 1377, 1419, 1506, 1626
BciVI	GTATCC	2 cut(s)	1314, 1608
BclI	TGATCA	2 cut(s)	433, 1972
BcnI	CCSGG	2 cut(s)	54, 1407
BcoDI	GTCTC	9 cut(s)	228, 383, 446, 975, 1408, 1431, 1669, 1992, 1995
BcuI	ACTAGT	1 cut(s)	752
BfaI	CTAG	5 cut(s)	257, 753, 1143, 1230, 1290
BfmI	CTRYAG	3 cut(s)	229, 635, 960
BfuAI	ACCTGC	1 cut(s)	1285
BfuI	GTATCC	2 cut(s)	1314, 1608
BglII	AGATCT	1 cut(s)	251
BlnI	CCTAGG	1 cut(s)	1289
BmcAI	AGTACT	1 cut(s)	1872
Bme1390I	CCNGG	8 cut(s)	54, 301, 1311, 1377, 1407, 1419, 1506, 1626
Bme18I	GGWCC	6 cut(s)	470, 617, 1286, 1316, 1628, 1858
BmgT120I	GGNCC	8 cut(s)	470, 617, 895, 1286, 1316, 1352, 1628, 1858
BmiI	GGNNCC	4 cut(s)	472, 565, 619, 1815
BmrFI	CCNGG	8 cut(s)	54, 301, 1311, 1377, 1407, 1419, 1506, 1626
BmrI	ACTGGG	1 cut(s)	1080
BmuI	ACTGGG	1 cut(s)	1080
BpiI	GAAGAC	1 cut(s)	1224
BpmI	CTGGAG	3 cut(s)	111, 1740, 1832
Bpu10I	CCTNAGC	3 cut(s)	558, 1371, 1602
BpuEI	CTTGAG	3 cut(s)	273, 724, 1651
BpuMI	CCSGG	2 cut(s)	54, 1407
BsaHI	GRCGYC	2 cut(s)	134, 1662
BsaI	GGTCTC	2 cut(s)	1408, 1431
BsaJI	CCNNGG	2 cut(s)	300, 1289
Bsc4I	CCNNNNNNNGG	7 cut(s)	1283, 1313, 1325, 1376, 1382, 1511, 1801
Bse118I	RCCGGY	1 cut(s)	1261
Bse1I	ACTGG	1 cut(s)	1086
Bse21I	CCTNAGG	1 cut(s)	1131
Bse3DI	GCAATG	1 cut(s)	1929
BseBI	CCWGG	6 cut(s)	301, 1311, 1377, 1419, 1506, 1626
BseDI	CCNNGG	2 cut(s)	300, 1289
BseGI	GGATG	5 cut(s)	163, 1009, 1299, 1573, 1933
BseLI	CCNNNNNNNGG	7 cut(s)	1283, 1313, 1325, 1376, 1382, 1511, 1801
BseMI	GCAATG	1 cut(s)	1929
BseMII	CTCAG	8 cut(s)	20, 572, 986, 1042, 1122, 1385, 1616, 1925
BseNI	ACTGG	1 cut(s)	1086
BseRI	GAGGAG	3 cut(s)	276, 1536, 1951
BseSI	GKGCMC	1 cut(s)	307
BsgI	GTGCAG	2 cut(s)	554, 1986
Bsh1285I	CGRYCG	1 cut(s)	165
BshFI	GGCC	5 cut(s)	494, 896, 1261, 1354, 1467
BsiEI	CGRYCG	1 cut(s)	165
BsiHKAI	GWGCWC	1 cut(s)	1528
BsiSI	CCGG	4 cut(s)	54, 111, 1262, 1406
BslFI	GGGAC	2 cut(s)	142, 456
BslI	CCNNNNNNNGG	7 cut(s)	1283, 1313, 1325, 1376, 1382, 1511, 1801
BsmAI	GTCTC	9 cut(s)	228, 383, 446, 975, 1408, 1431, 1669, 1992, 1995
BsmBI	CGTCTC	1 cut(s)	1669
BsmFI	GGGAC	2 cut(s)	142, 456
BsmI	GAATGC	3 cut(s)	591, 1753, 1848
BsnI	GGCC	5 cut(s)	494, 896, 1261, 1354, 1467
Bso31I	GGTCTC	2 cut(s)	1408, 1431
Bsp1286I	GDGCHC	2 cut(s)	307, 1528
Bsp143I	GATC	9 cut(s)	151, 251, 370, 433, 499, 643, 1103, 1173, 1972
BspANI	GGCC	5 cut(s)	494, 896, 1261, 1354, 1467
BspCNI	CTCAG	8 cut(s)	19, 571, 985, 1041, 1123, 1384, 1615, 1926
BspHI	TCATGA	1 cut(s)	765
BspLI	GGNNCC	4 cut(s)	472, 565, 619, 1815
BspMAI	CTGCAG	3 cut(s)	233, 639, 964
BspMI	ACCTGC	1 cut(s)	1285
BspPI	GGATC	4 cut(s)	365, 494, 638, 1111
BspQI	GCTCTTC	2 cut(s)	708, 1533
BspTNI	GGTCTC	2 cut(s)	1408, 1431
BsrBI	CCGCTC	1 cut(s)	390
BsrDI	GCAATG	1 cut(s)	1929
BsrFI	RCCGGY	1 cut(s)	1261
BsrI	ACTGG	1 cut(s)	1086
BssAI	RCCGGY	1 cut(s)	1261
BssECI	CCNNGG	2 cut(s)	300, 1289
BssMI	GATC	9 cut(s)	151, 251, 370, 433, 499, 643, 1103, 1173, 1972
BssNI	GRCGYC	2 cut(s)	134, 1662
BssSI	CACGAG	1 cut(s)	449
BssT1I	CCWWGG	1 cut(s)	1289
Bst2BI	CACGAG	1 cut(s)	449
Bst2UI	CCWGG	6 cut(s)	301, 1311, 1377, 1419, 1506, 1626
Bst4CI	ACNGT	1 cut(s)	166
Bst6I	CTCTTC	4 cut(s)	708, 1343, 1513, 1533
BstACI	GRCGYC	2 cut(s)	134, 1662
BstAPI	GCANNNNNTGC	1 cut(s)	1570
BstC8I	GCNNGC	3 cut(s)	1469, 1743, 1956
BstDEI	CTNAG	8 cut(s)	6, 558, 972, 1028, 1131, 1371, 1602, 1934
BstF5I	GGATG	5 cut(s)	163, 1009, 1299, 1573, 1933
BstHHI	GCGC	2 cut(s)	121, 1207
BstKTI	GATC	9 cut(s)	154, 254, 373, 436, 502, 646, 1106, 1176, 1975
BstMAI	GTCTC	9 cut(s)	228, 383, 446, 975, 1408, 1431, 1669, 1992, 1995
BstMBI	GATC	9 cut(s)	151, 251, 370, 433, 499, 643, 1103, 1173, 1972
BstMCI	CGRYCG	1 cut(s)	165
BstNI	CCWGG	6 cut(s)	301, 1311, 1377, 1419, 1506, 1626
BstNSI	RCATGY	1 cut(s)	1645
BstSCI	CCNGG	8 cut(s)	52, 299, 1309, 1375, 1405, 1417, 1504, 1624
BstSFI	CTRYAG	3 cut(s)	229, 635, 960
BstSLI	GKGCMC	1 cut(s)	307
BstV2I	GAAGAC	1 cut(s)	1224
BstX2I	RGATCY	3 cut(s)	251, 643, 1103
BstYI	RGATCY	3 cut(s)	251, 643, 1103
Bsu36I	CCTNAGG	1 cut(s)	1131
BsuI	GTATCC	2 cut(s)	1314, 1608
BsuRI	GGCC	5 cut(s)	494, 896, 1261, 1354, 1467
BtsCI	GGATG	5 cut(s)	163, 1009, 1299, 1573, 1933
BtsIMutI	CAGTG	3 cut(s)	305, 543, 1093
BveI	ACCTGC	1 cut(s)	1285
Cac8I	GCNNGC	3 cut(s)	1469, 1743, 1956
CciI	TCATGA	1 cut(s)	765
CfoI	GCGC	2 cut(s)	121, 1207
Cfr10I	RCCGGY	1 cut(s)	1261
Cfr13I	GGNCC	8 cut(s)	470, 617, 895, 1286, 1316, 1352, 1628, 1858
CseI	GACGC	2 cut(s)	854, 1000
CsiI	ACCWGGT	3 cut(s)	1309, 1417, 1504
Csp6I	GTAC	4 cut(s)	538, 1403, 1871, 2009
CviAII	CATG	6 cut(s)	238, 325, 766, 1065, 1447, 1642
CviQI	GTAC	4 cut(s)	538, 1403, 1871, 2009
DdeI	CTNAG	8 cut(s)	6, 558, 972, 1028, 1131, 1371, 1602, 1934
DpnI	GATC	9 cut(s)	153, 253, 372, 435, 501, 645, 1105, 1175, 1974
DpnII	GATC	9 cut(s)	151, 251, 370, 433, 499, 643, 1103, 1173, 1972
DraIII	CACNNNGTG	1 cut(s)	1313
EaeI	YGGCCR	1 cut(s)	492
Eam1104I	CTCTTC	4 cut(s)	708, 1343, 1513, 1533
EarI	CTCTTC	4 cut(s)	708, 1343, 1513, 1533
Ecl136II	GAGCTC	1 cut(s)	1526
Eco130I	CCWWGG	1 cut(s)	1289
Eco24I	GRGCYC	1 cut(s)	1528
Eco31I	GGTCTC	2 cut(s)	1408, 1431
Eco32I	GATATC	1 cut(s)	1388
Eco47I	GGWCC	6 cut(s)	470, 617, 1286, 1316, 1628, 1858
Eco53kI	GAGCTC	1 cut(s)	1526
Eco57I	CTGAAG	1 cut(s)	90
Eco81I	CCTNAGG	1 cut(s)	1131
EcoICRI	GAGCTC	1 cut(s)	1526
EcoO109I	RGGNCCY	1 cut(s)	1352
EcoRI	GAATTC	1 cut(s)	817
EcoRII	CCWGG	6 cut(s)	299, 1309, 1375, 1417, 1504, 1624
EcoRV	GATATC	1 cut(s)	1388
EcoT14I	CCWWGG	1 cut(s)	1289
EcoT22I	ATGCAT	1 cut(s)	1575
EcoT38I	GRGCYC	1 cut(s)	1528
ErhI	CCWWGG	1 cut(s)	1289
Esp3I	CGTCTC	1 cut(s)	1669
FaeI	CATG	6 cut(s)	241, 328, 769, 1068, 1450, 1645
FaqI	GGGAC	2 cut(s)	142, 456
FatI	CATG	6 cut(s)	237, 324, 765, 1064, 1446, 1641
FauI	CCCGC	3 cut(s)	196, 1803, 1951
FauNDI	CATATG	1 cut(s)	1657
FbaI	TGATCA	2 cut(s)	433, 1972
FokI	GGATG	5 cut(s)	170, 1016, 1306, 1560, 1940
FriOI	GRGCYC	1 cut(s)	1528
FspBI	CTAG	5 cut(s)	257, 753, 1143, 1230, 1290
FspI	TGCGCA	2 cut(s)	120, 1206
GlaI	GCGC	2 cut(s)	120, 1206
GsuI	CTGGAG	3 cut(s)	111, 1740, 1832
HaeIII	GGCC	5 cut(s)	494, 896, 1261, 1354, 1467
HapII	CCGG	4 cut(s)	54, 111, 1262, 1406
HgaI	GACGC	2 cut(s)	854, 1000
HhaI	GCGC	2 cut(s)	121, 1207
Hin1I	GRCGYC	2 cut(s)	134, 1662
Hin1II	CATG	6 cut(s)	241, 328, 769, 1068, 1450, 1645
Hin6I	GCGC	2 cut(s)	119, 1205
HinP1I	GCGC	2 cut(s)	119, 1205
HincII	GTYRAC	2 cut(s)	274, 844
HindII	GTYRAC	2 cut(s)	274, 844
HpaI	GTTAAC	1 cut(s)	274
HpaII	CCGG	4 cut(s)	54, 111, 1262, 1406
HphI	GGTGA	6 cut(s)	161, 665, 788, 1084, 1793, 1881
Hpy166II	GTNNAC	7 cut(s)	195, 274, 628, 669, 844, 1319, 1615
Hpy188I	TCNGA	9 cut(s)	9, 249, 697, 743, 823, 910, 1031, 1385, 1935
Hpy8I	GTNNAC	7 cut(s)	195, 274, 628, 669, 844, 1319, 1615
Hpy99I	CGWCG	1 cut(s)	136
HpyAV	CCTTC	6 cut(s)	333, 657, 773, 886, 946, 1557
HpyCH4III	ACNGT	1 cut(s)	166
HpyCH4IV	ACGT	3 cut(s)	134, 270, 1662
HpyF3I	CTNAG	8 cut(s)	6, 558, 972, 1028, 1131, 1371, 1602, 1934
HpySE526I	ACGT	3 cut(s)	134, 270, 1662
Hsp92I	GRCGYC	2 cut(s)	134, 1662
Hsp92II	CATG	6 cut(s)	241, 328, 769, 1068, 1450, 1645
HspAI	GCGC	2 cut(s)	119, 1205
Ksp22I	TGATCA	2 cut(s)	433, 1972
KspAI	GTTAAC	1 cut(s)	274
Kzo9I	GATC	9 cut(s)	151, 251, 370, 433, 499, 643, 1103, 1173, 1972
LguI	GCTCTTC	2 cut(s)	708, 1533
LmnI	GCTCC	8 cut(s)	92, 113, 563, 1048, 1523, 1759, 1804, 1813
MabI	ACCWGGT	3 cut(s)	1309, 1417, 1504
MaeI	CTAG	5 cut(s)	257, 753, 1143, 1230, 1290
MaeII	ACGT	3 cut(s)	134, 270, 1662
MaeIII	GTNAC	9 cut(s)	166, 745, 1012, 1079, 1177, 1233, 1691, 1834, 1912
MalI	GATC	9 cut(s)	153, 253, 372, 435, 501, 645, 1105, 1175, 1974
MbiI	CCGCTC	1 cut(s)	390
MboI	GATC	9 cut(s)	151, 251, 370, 433, 499, 643, 1103, 1173, 1972
MboII	GAAGA	6 cut(s)	725, 1229, 1330, 1435, 1520, 1530
MfeI	CAATTG	1 cut(s)	429
MflI	RGATCY	3 cut(s)	251, 643, 1103
MhlI	GDGCHC	2 cut(s)	307, 1528
MluCI	AATT	5 cut(s)	319, 429, 808, 817, 1244
MlyI	GAGTC	3 cut(s)	238, 707, 1688
MmeI	TCCRAC	1 cut(s)	595
Mph1103I	ATGCAT	1 cut(s)	1575
MroXI	GAANNNNTTC	1 cut(s)	1872
MseI	TTAA	8 cut(s)	273, 333, 411, 594, 663, 720, 993, 1902
MslI	CAYNNNNRTG	3 cut(s)	1451, 1689, 1841
MspA1I	CMGCKG	4 cut(s)	181, 1210, 1810, 1970
MspI	CCGG	4 cut(s)	54, 111, 1262, 1406
MspR9I	CCNGG	8 cut(s)	54, 301, 1311, 1377, 1407, 1419, 1506, 1626
MunI	CAATTG	1 cut(s)	429
Mva1269I	GAATGC	3 cut(s)	591, 1753, 1848
MvaI	CCWGG	6 cut(s)	301, 1311, 1377, 1419, 1506, 1626
NciI	CCSGG	2 cut(s)	54, 1407
NdeI	CATATG	1 cut(s)	1657
NdeII	GATC	9 cut(s)	151, 251, 370, 433, 499, 643, 1103, 1173, 1972
NlaIII	CATG	6 cut(s)	241, 328, 769, 1068, 1450, 1645
NlaIV	GGNNCC	4 cut(s)	472, 565, 619, 1815
NmuCI	GTSAC	6 cut(s)	166, 745, 1012, 1079, 1691, 1834
NsbI	TGCGCA	2 cut(s)	120, 1206
NsiI	ATGCAT	1 cut(s)	1575
NspI	RCATGY	1 cut(s)	1645
PagI	TCATGA	1 cut(s)	765
PaqCI	CACCTGC	1 cut(s)	1285
PciSI	GCTCTTC	2 cut(s)	708, 1533
PctI	GAATGC	3 cut(s)	591, 1753, 1848
PdmI	GAANNNNTTC	1 cut(s)	1872
PfeI	GAWTC	8 cut(s)	10, 173, 415, 1366, 1380, 1786, 1820, 1886
PflFI	GACNNNGTC	1 cut(s)	133
PflMI	CCANNNNNTGG	1 cut(s)	1313
PleI	GAGTC	3 cut(s)	238, 706, 1688
PpsI	GAGTC	3 cut(s)	238, 706, 1688
Psp124BI	GAGCTC	1 cut(s)	1528
Psp6I	CCWGG	6 cut(s)	299, 1309, 1375, 1417, 1504, 1624
PspGI	CCWGG	6 cut(s)	299, 1309, 1375, 1417, 1504, 1624
PspN4I	GGNNCC	4 cut(s)	472, 565, 619, 1815
PspPI	GGNCC	8 cut(s)	470, 617, 895, 1286, 1316, 1352, 1628, 1858
PstI	CTGCAG	3 cut(s)	233, 639, 964
PsuI	RGATCY	3 cut(s)	251, 643, 1103
PsyI	GACNNNGTC	1 cut(s)	133
PvuII	CAGCTG	3 cut(s)	181, 1810, 1970
RsaI	GTAC	4 cut(s)	539, 1404, 1872, 2010
RsaNI	GTAC	4 cut(s)	538, 1403, 1871, 2009
RseI	CAYNNNNRTG	3 cut(s)	1451, 1689, 1841
SacI	GAGCTC	1 cut(s)	1528
SapI	GCTCTTC	2 cut(s)	708, 1533
SaqAI	TTAA	8 cut(s)	273, 333, 411, 594, 663, 720, 993, 1902
Sau3AI	GATC	9 cut(s)	151, 251, 370, 433, 499, 643, 1103, 1173, 1972
Sau96I	GGNCC	8 cut(s)	470, 617, 895, 1286, 1316, 1352, 1628, 1858
ScaI	AGTACT	1 cut(s)	1872
SchI	GAGTC	3 cut(s)	238, 707, 1688
ScrFI	CCNGG	8 cut(s)	54, 301, 1311, 1377, 1407, 1419, 1506, 1626
SduI	GDGCHC	2 cut(s)	307, 1528
SexAI	ACCWGGT	3 cut(s)	1309, 1417, 1504
SfcI	CTRYAG	3 cut(s)	229, 635, 960
SinI	GGWCC	6 cut(s)	470, 617, 1286, 1316, 1628, 1858
SmiMI	CAYNNNNRTG	3 cut(s)	1451, 1689, 1841
SmlI	CTYRAG	3 cut(s)	288, 703, 1666
SmoI	CTYRAG	3 cut(s)	288, 703, 1666
SpeI	ACTAGT	1 cut(s)	752
Sse9I	AATT	5 cut(s)	319, 429, 808, 817, 1244
SspMI	CTAG	5 cut(s)	257, 753, 1143, 1230, 1290
SstI	GAGCTC	1 cut(s)	1528
StyD4I	CCNGG	8 cut(s)	52, 299, 1309, 1375, 1405, 1417, 1504, 1624
StyI	CCWWGG	1 cut(s)	1289
TaaI	ACNGT	1 cut(s)	166
TaiI	ACGT	3 cut(s)	137, 273, 1665
TaqI	TCGA	3 cut(s)	515, 980, 1585
TasI	AATT	5 cut(s)	319, 429, 808, 817, 1244
TatI	WGTACW	1 cut(s)	1870
TauI	GCSGC	7 cut(s)	68, 80, 83, 89, 101, 104, 107
TfiI	GAWTC	8 cut(s)	10, 173, 415, 1366, 1380, 1786, 1820, 1886
Tru1I	TTAA	8 cut(s)	273, 333, 411, 594, 663, 720, 993, 1902
Tru9I	TTAA	8 cut(s)	273, 333, 411, 594, 663, 720, 993, 1902
TscAI	CASTG	3 cut(s)	312, 550, 1093
TseFI	GTSAC	6 cut(s)	166, 745, 1012, 1079, 1691, 1834
Tsp45I	GTSAC	6 cut(s)	166, 745, 1012, 1079, 1691, 1834
TspDTI	ATGAA	5 cut(s)	313, 564, 726, 1175, 1435
TspGWI	ACGGA	3 cut(s)	185, 212, 371
TspRI	CASTG	3 cut(s)	312, 550, 1093
Tth111I	GACNNNGTC	1 cut(s)	133
Van91I	CCANNNNNTGG	1 cut(s)	1313
VpaK11BI	GGWCC	6 cut(s)	470, 617, 1286, 1316, 1628, 1858
XapI	RAATTY	2 cut(s)	319, 817
XceI	RCATGY	1 cut(s)	1645
XmaJI	CCTAGG	1 cut(s)	1289
XmnI	GAANNNNTTC	1 cut(s)	1872
XspI	CTAG	5 cut(s)	257, 753, 1143, 1230, 1290
ZraI	GACGTC	2 cut(s)	135, 1663
ZrmI	AGTACT	1 cut(s)	1872
Zsp2I	ATGCAT	1 cut(s)	1575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.