Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0002657

Physical Location & Seq

Genomic Coordinates Forward (+)

10077240 .. 10082849

Gene Structure 5610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g07970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGCGCAAGTTCAGCAGGTTTCGGCTCAGAATGCGAACGCGGCAGCAGCGGCAGCTGTGGCGAACGGTGCCGGAGGAGCTAACCAGTTCGTGACGACGTCGCTTTACGTTGGCGATCTTGACCCGAACGTCACCGATTCGCAGCTCTACGACCTGTTCAACCAGCTGGGTCAGGTAGTTTCGGTTAGGGTTTGCAGGGACTTGTCCACTCGGAGGTCGCTTGGCTATGGCTATGTCAATTTTGCCAACCCGCAAGATGCTGCTAGGGCTTTGGATATGTTGAACTTTACTCCTGTGAATGGAAGGCCCATTAGGATTATGTACTCTCATCGTGATCCTACTATTCGCAGAAGTGGGGCTGGAAACATATTTATTAAGAATTTGGACAAAGCTATTGATCGCAAAGCCTTGCATGATACATTTTCTGCATTTGGAGACATCCTTTCTTGCAAGGTGGCTACTGATCCTGCTGGCCAGTCAAAAGGCTATGGCTTTGTACAATTTGACAAAGAAGAAGCTGCCCAAAAGGCTATAGAGAAGTTGAATGGTATGCTTTTAAATGATAAGCAAGTTTATGTTGGTCCTTTCCTGCGGAAACAGGAAAGAGACAGTACTGCTGACAAGTCAAGATTCAACAATGTTTATGTAAAGAATCTGTCAGAGTCAACTACCGAGGAAGATTTGAAAAAAGTTTTTTCTGAATTTGGGATAACCACTAGTGAAGTGGTGATGAGGGATGGAGATGGAAAATCAAAGTGCTTTGGGTTTGTCAATTTTGAAAAGGCTGATGATGCTGCTAGAGCTGTTGAGGCTTTGAATGGAAAGAAATTTGATGATAAGGAGTGGTATGTTGGGAAGGCCCAGAAGAAATCTGAAAGGGAAAATGAGTTGAAACAACGATTTGAACAGAGTATGAAAGAGGCAGCAGACAAGTATCAAGGCGCGAACTTGTATGTTAAAAATTTGGATGATACCATTGCTGATGATAAACTTCACGAGCTTTTCTCTCCATTTGGGACTATTACCTCATGCAAGGTCATGCGAGATCCTAGTGGAATAAGTAGGGGATCAGGTTTTGTTGCATTCTCAACTCCTGAAGAGGCAAATAGAGCTCTATTGGAGATGAATGGAAAGATGATTGTAAGTAAACCTCTCTATGTTGCACTTGCACAACGAAAAGAAGATAGAAGAGCAAGGCTACTGGCTCAGTTTTCTCAAATGCGGCCTGTTGCAATGGCACCTTCTCGTATGCCAATGTACCCTCCTGGTGGTCCAGGTCTTGGACAACAAATATTCTACGGTCAAGGCCCACCTGCTATCATTCCCTCACAGCCTGGATTCGGGTATCAGCAGCAGCTTGTTCCTGGTATGAGGCCTGGTGGGGCACCAATGCCAAATTTCTTTGTGCCAATGGTTCAGCAGGGGCAGCAAGGGCAGCGTCCTGGTGGCAGACGTGTGGGCTCTGTCCAGCAAAACCAACAACCAGTTCCGATAATGCAACAGCAGATGCTACCAAGGGGACGTGTCTACCGCTACCCATCTGGTCGCGGAATACCTGACGGTCCTATGCCTGGTGTTGCTGGAGGCATGTTTTCTGTACCATATGACATGGGCGGCGGTGGCGGCATGCCTATCCGTGATGCAGCACTGTCCCAGCCAACAATTCCAATAGGGGCATTGGCTACTGCTCTTGCAAATGCTACACCAGAGCAGCAAAGAACGATGCTGGGTGAGAATCTTTACCCGCTCGTGGAACAGCTGGAACCTGACAATGCAGCGAAGGTTACAGGAATGCTTCTGGAGATGGATCGGACTGAGGTTCTTCATTTGCTCGAGTCGCCTGAAGCTTTGAAGGCAAAGGTAGCTGAGGCTATGGATGTTCTGAGGAACGTTGCTCAGCAACAGCAAGTTGGCAATGCAGCTCGATCAACTTGGCTCATTGTCACTCAATGGGAACCTTGTTTCATGAGAGTTTTCATCTTTGGATTTGATGGATTGAGACACTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006412 GO:0006413 GO:0006417 GO:0006446 GO:0006518 GO:0006807 GO:0006950 GO:0006970 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009628 GO:0009651 GO:0009889 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010608 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031329 GO:0032268 GO:0034248 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:1900151 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1903311 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

670

Amino Acids

73.44

Weight (kDa)

8.88

Isoelectric Point (pI)

38.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	35 - 105	4.8e-21	RNA recognition motif
RRM_1	PF00076	123 - 191	2.1e-21	RNA recognition motif
RRM_1	PF00076	214 - 282	2.8e-22	RNA recognition motif
RRM_1	PF00076	317 - 385	1.1e-18	RNA recognition motif
MLLE	PF00658	563 - 628	7.5e-30	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49760 AT1G49760 AT4G34110
fragaria_vesca	FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g34040 FvH4_2g34040 FvH4_2g34040 FvH4_6g37220
malus_domestica	MD00G1138300.v1.1 MD05G1085100.v1.1 MD08G1096400.v1.1 MD15G1079100.v1.1
prunus_persica	Prupe.1G432200_v2.0.a1 Prupe.1G432200_v2.0.a1 Prupe.8G129400_v2.0.a1 Prupe.8G129400_v2.0.a1
pyrus_communis	pycom05g08430 pycom08g07840 pycom10g07970 pycom15g07370
rosa_chinensis	RchiOBHm_Chr6g0256591 RchiOBHm_Chr6g0308331
rosa_laevigata	RLG00000010649 RLG00000014752
rosa_multiflora	Rmu_sc0003012.1_g000007
rosa_roxburghii	Rroxscaffold_7G00160250 Rroxscaffold_7G00209190
rosa_rugosa	Rorug05G0564800 Rorug06G0366200 Rorug06G0366200
rosa_samantha	Rh6AG082800 Rh6AG475400 Rh6BG077400 Rh6CG072000 Rh6DG477300
rosa_wichuraiana	Rw6G007450 Rw6G041440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1321
AasI	GACNNNNNNGTC	1 cut(s)	128
AatII	GACGTC	1 cut(s)	101
Acc36I	ACCTGC	2 cut(s)	7, 1321
AccB1I	GGYRCC	3 cut(s)	68, 1237, 1384
AccB7I	CCANNNNNTGG	1 cut(s)	1280
AccBSI	CCGCTC	1 cut(s)	1747
AccI	GTMKAC	1 cut(s)	1527
AccII	CGCG	3 cut(s)	41, 944, 1548
AclI	AACGTT	1 cut(s)	1890
AclWI	GGATC	5 cut(s)	329, 458, 1040, 1075, 1815
AcoI	YGGCCR	1 cut(s)	472
AcsI	RAATTY	5 cut(s)	379, 701, 827, 961, 1396
AcuI	CTGAAG	2 cut(s)	1116, 1863
AcyI	GRCGYC	1 cut(s)	98
AfaI	GTAC	5 cut(s)	323, 498, 613, 1259, 1599
AfiI	CCNNNNNNNGG	7 cut(s)	213, 299, 1268, 1280, 1340, 1571, 1750
AflIII	ACRYGT	2 cut(s)	1453, 1522
AhlI	ACTAGT	1 cut(s)	716
AjiI	CACGTC	2 cut(s)	1454, 1523
AjnI	CCWGG	7 cut(s)	1264, 1273, 1333, 1363, 1375, 1441, 1570
AjuI	GAANNNNNNNTTGG	2 cut(s)	1470, 1502
Alw21I	GWGCWC	1 cut(s)	1114
Alw26I	GTCTC	3 cut(s)	429, 600, 1993
AlwI	GGATC	5 cut(s)	329, 458, 1040, 1075, 1815
Ama87I	CYCGRG	1 cut(s)	1832
AoxI	GGCC	6 cut(s)	305, 472, 858, 1223, 1306, 1373
ApoI	RAATTY	5 cut(s)	379, 701, 827, 961, 1396
AspLEI	GCGC	2 cut(s)	7, 944
AspS9I	GGNCC	6 cut(s)	306, 581, 859, 1271, 1307, 1562
AsuHPI	GGTGA	3 cut(s)	124, 739, 1742
AvaI	CYCGRG	1 cut(s)	1832
AvaII	GGWCC	3 cut(s)	581, 1271, 1562
BaeGI	GKGCMC	1 cut(s)	1387
BalI	TGGCCA	1 cut(s)	474
BanI	GGYRCC	3 cut(s)	68, 1237, 1384
BanII	GRGCYC	2 cut(s)	1114, 1463
BauI	CACGAG	2 cut(s)	995, 1748
Bbv12I	GWGCWC	1 cut(s)	1114
BbvCI	CCTCAGC	1 cut(s)	1866
BccI	CCATC	5 cut(s)	731, 737, 1546, 1798, 1985
BciT130I	CCWGG	7 cut(s)	1266, 1275, 1335, 1365, 1377, 1443, 1572
BcoDI	GTCTC	3 cut(s)	429, 600, 1993
BcuI	ACTAGT	1 cut(s)	716
BfaI	CTAG	4 cut(s)	264, 717, 798, 1050
BfmI	CTRYAG	1 cut(s)	531
BfuAI	ACCTGC	2 cut(s)	7, 1321
BglI	GCCNNNNNGGC	1 cut(s)	527
BlpI	GCTNAGC	1 cut(s)	1896
BmcAI	AGTACT	1 cut(s)	613
Bme1390I	CCNGG	7 cut(s)	1266, 1275, 1335, 1365, 1377, 1443, 1572
Bme18I	GGWCC	3 cut(s)	581, 1271, 1562
BmeT110I	CYCGRG	1 cut(s)	1832
BmgBI	CACGTC	2 cut(s)	1454, 1523
BmgT120I	GGNCC	6 cut(s)	306, 581, 859, 1271, 1307, 1562
BmiI	GGNNCC	5 cut(s)	70, 1239, 1386, 1764, 1956
BmrFI	CCNGG	7 cut(s)	1266, 1275, 1335, 1365, 1377, 1443, 1572
BmsI	GCATC	5 cut(s)	247, 781, 1497, 1630, 1713
BplI	GAGNNNNNCTC	2 cut(s)	989, 1021
BpmI	CTGGAG	2 cut(s)	1602, 1820
Bpu10I	CCTNAGC	1 cut(s)	1866
Bpu1102I	GCTNAGC	1 cut(s)	1896
BsaHI	GRCGYC	1 cut(s)	98
BsaJI	CCNNGG	2 cut(s)	672, 1514
Bsc4I	CCNNNNNNNGG	7 cut(s)	213, 299, 1268, 1280, 1340, 1571, 1750
Bse1I	ACTGG	4 cut(s)	85, 475, 1206, 1484
Bse3DI	GCAATG	3 cut(s)	975, 1239, 1921
BseBI	CCWGG	7 cut(s)	1266, 1275, 1335, 1365, 1377, 1443, 1572
BseDI	CCNNGG	2 cut(s)	672, 1514
BseGI	GGATG	4 cut(s)	438, 742, 973, 1882
BseLI	CCNNNNNNNGG	7 cut(s)	213, 299, 1268, 1280, 1340, 1571, 1750
BseMI	GCAATG	3 cut(s)	975, 1239, 1921
BseMII	CTCAG	6 cut(s)	41, 1220, 1806, 1857, 1874, 1910
BseNI	ACTGG	4 cut(s)	85, 475, 1206, 1484
BseRI	GAGGAG	1 cut(s)	90
BseSI	GKGCMC	1 cut(s)	1387
BseYI	CCCAGC	3 cut(s)	166, 1653, 1726
Bsh1236I	CGCG	3 cut(s)	41, 944, 1548
BshFI	GGCC	6 cut(s)	307, 474, 860, 1225, 1308, 1375
BshNI	GGYRCC	3 cut(s)	68, 1237, 1384
BsiHKAI	GWGCWC	1 cut(s)	1114
BsiHKCI	CYCGRG	1 cut(s)	1832
BsiSI	CCGG	1 cut(s)	72
BslFI	GGGAC	4 cut(s)	212, 1030, 1533, 1636
BslI	CCNNNNNNNGG	7 cut(s)	213, 299, 1268, 1280, 1340, 1571, 1750
BsmAI	GTCTC	3 cut(s)	429, 600, 1993
BsmFI	GGGAC	4 cut(s)	212, 1030, 1533, 1636
BsmI	GAATGC	3 cut(s)	37, 1082, 1797
BsnI	GGCC	6 cut(s)	307, 474, 860, 1225, 1308, 1375
BsoBI	CYCGRG	1 cut(s)	1832
Bsp1286I	GDGCHC	3 cut(s)	1114, 1387, 1463
Bsp1407I	TGTACA	1 cut(s)	496
Bsp143I	GATC	8 cut(s)	115, 334, 397, 463, 1045, 1067, 1807, 1925
Bsp1720I	GCTNAGC	1 cut(s)	1896
BspANI	GGCC	6 cut(s)	307, 474, 860, 1225, 1308, 1375
BspCNI	CTCAG	6 cut(s)	40, 1219, 1807, 1858, 1875, 1909
BspFNI	CGCG	3 cut(s)	41, 944, 1548
BspHI	TCATGA	1 cut(s)	1965
BspLI	GGNNCC	5 cut(s)	70, 1239, 1386, 1764, 1956
BspMI	ACCTGC	2 cut(s)	7, 1321
BspPI	GGATC	5 cut(s)	329, 458, 1040, 1075, 1815
BspQI	GCTCTTC	1 cut(s)	1183
BspT107I	GGYRCC	3 cut(s)	68, 1237, 1384
BsrBI	CCGCTC	1 cut(s)	1747
BsrDI	GCAATG	3 cut(s)	975, 1239, 1921
BsrGI	TGTACA	1 cut(s)	496
BsrI	ACTGG	4 cut(s)	85, 475, 1206, 1484
BssECI	CCNNGG	2 cut(s)	672, 1514
BssMI	GATC	8 cut(s)	115, 334, 397, 463, 1045, 1067, 1807, 1925
BssNI	GRCGYC	1 cut(s)	98
BssSI	CACGAG	2 cut(s)	995, 1748
BssT1I	CCWWGG	1 cut(s)	1514
Bst2BI	CACGAG	2 cut(s)	995, 1748
Bst2UI	CCWGG	7 cut(s)	1266, 1275, 1335, 1365, 1377, 1443, 1572
Bst4CI	ACNGT	5 cut(s)	68, 611, 1301, 1562, 1650
Bst6I	CTCTTC	2 cut(s)	1092, 1183
BstACI	GRCGYC	1 cut(s)	98
BstAUI	TGTACA	1 cut(s)	496
BstC8I	GCNNGC	2 cut(s)	472, 1628
BstDEI	CTNAG	6 cut(s)	27, 1206, 1815, 1866, 1883, 1896
BstF5I	GGATG	4 cut(s)	438, 742, 973, 1882
BstFNI	CGCG	3 cut(s)	41, 944, 1548
BstHHI	GCGC	2 cut(s)	7, 944
BstKTI	GATC	8 cut(s)	118, 337, 400, 466, 1048, 1070, 1810, 1928
BstMAI	GTCTC	3 cut(s)	429, 600, 1993
BstMBI	GATC	8 cut(s)	115, 334, 397, 463, 1045, 1067, 1807, 1925
BstNI	CCWGG	7 cut(s)	1266, 1275, 1335, 1365, 1377, 1443, 1572
BstNSI	RCATGY	2 cut(s)	1591, 1630
BstSCI	CCNGG	7 cut(s)	1264, 1273, 1333, 1363, 1375, 1441, 1570
BstSFI	CTRYAG	1 cut(s)	531
BstSLI	GKGCMC	1 cut(s)	1387
BstUI	CGCG	3 cut(s)	41, 944, 1548
BstX2I	RGATCY	1 cut(s)	1045
BstYI	RGATCY	1 cut(s)	1045
BsuRI	GGCC	6 cut(s)	307, 474, 860, 1225, 1308, 1375
BtrI	CACGTC	2 cut(s)	1454, 1523
BtsCI	GGATG	4 cut(s)	438, 742, 973, 1882
BtsIMutI	CAGTG	1 cut(s)	1646
BveI	ACCTGC	2 cut(s)	7, 1321
Cac8I	GCNNGC	2 cut(s)	472, 1628
CciI	TCATGA	1 cut(s)	1965
CfoI	GCGC	2 cut(s)	7, 944
Cfr13I	GGNCC	6 cut(s)	306, 581, 859, 1271, 1307, 1562
CseI	GACGC	1 cut(s)	1427
Csp6I	GTAC	5 cut(s)	322, 497, 612, 1258, 1598
CviAII	CATG	7 cut(s)	413, 1029, 1039, 1588, 1609, 1627, 1966
CviQI	GTAC	5 cut(s)	322, 497, 612, 1258, 1598
DdeI	CTNAG	6 cut(s)	27, 1206, 1815, 1866, 1883, 1896
DpnI	GATC	8 cut(s)	117, 336, 399, 465, 1047, 1069, 1809, 1927
DpnII	GATC	8 cut(s)	115, 334, 397, 463, 1045, 1067, 1807, 1925
DraI	TTTAAA	1 cut(s)	558
DrdI	GACNNNNNNGTC	1 cut(s)	128
DseDI	GACNNNNNNGTC	1 cut(s)	128
EaeI	YGGCCR	1 cut(s)	472
Eam1104I	CTCTTC	2 cut(s)	1092, 1183
EarI	CTCTTC	2 cut(s)	1092, 1183
Ecl136II	GAGCTC	1 cut(s)	1112
Eco130I	CCWWGG	1 cut(s)	1514
Eco147I	AGGCCT	1 cut(s)	1375
Eco24I	GRGCYC	2 cut(s)	1114, 1463
Eco47I	GGWCC	3 cut(s)	581, 1271, 1562
Eco53kI	GAGCTC	1 cut(s)	1112
Eco57I	CTGAAG	2 cut(s)	1116, 1863
Eco88I	CYCGRG	1 cut(s)	1832
EcoICRI	GAGCTC	1 cut(s)	1112
EcoRII	CCWGG	7 cut(s)	1264, 1273, 1333, 1363, 1375, 1441, 1570
EcoT14I	CCWWGG	1 cut(s)	1514
EcoT38I	GRGCYC	2 cut(s)	1114, 1463
ErhI	CCWWGG	1 cut(s)	1514
FaeI	CATG	7 cut(s)	416, 1032, 1042, 1591, 1612, 1630, 1969
FaqI	GGGAC	4 cut(s)	212, 1030, 1533, 1636
FatI	CATG	7 cut(s)	412, 1028, 1038, 1587, 1608, 1626, 1965
FauI	CCCGC	2 cut(s)	258, 1752
FauNDI	CATATG	1 cut(s)	1603
FblI	GTMKAC	1 cut(s)	1527
FokI	GGATG	4 cut(s)	425, 749, 980, 1889
FriOI	GRGCYC	2 cut(s)	1114, 1463
FspBI	CTAG	4 cut(s)	264, 717, 798, 1050
GlaI	GCGC	2 cut(s)	6, 943
GsaI	CCCAGC	3 cut(s)	170, 1657, 1730
GsuI	CTGGAG	2 cut(s)	1602, 1820
HaeIII	GGCC	6 cut(s)	307, 474, 860, 1225, 1308, 1375
HapII	CCGG	1 cut(s)	72
HgaI	GACGC	1 cut(s)	1427
HhaI	GCGC	2 cut(s)	7, 944
Hin1I	GRCGYC	1 cut(s)	98
Hin1II	CATG	7 cut(s)	416, 1032, 1042, 1591, 1612, 1630, 1969
Hin6I	GCGC	2 cut(s)	5, 942
HinP1I	GCGC	2 cut(s)	5, 942
HincII	GTYRAC	1 cut(s)	666
HindII	GTYRAC	1 cut(s)	666
HindIII	AAGCTT	1 cut(s)	1845
HinfI	GANTC	7 cut(s)	137, 630, 652, 662, 1338, 1735, 1835
HpaII	CCGG	1 cut(s)	72
HphI	GGTGA	3 cut(s)	124, 739, 1742
Hpy166II	GTNNAC	4 cut(s)	207, 666, 1148, 1528
Hpy188I	TCNGA	8 cut(s)	30, 213, 661, 700, 874, 1491, 1812, 1884
Hpy188III	TCNNGA	8 cut(s)	91, 119, 332, 627, 995, 1094, 1799, 1966
Hpy8I	GTNNAC	4 cut(s)	207, 666, 1148, 1528
Hpy99I	CGWCG	2 cut(s)	100, 103
HpyAV	CCTTC	5 cut(s)	297, 850, 1251, 1774, 1846
HpyCH4III	ACNGT	5 cut(s)	68, 611, 1301, 1562, 1650
HpyCH4IV	ACGT	6 cut(s)	98, 108, 129, 1453, 1522, 1890
HpyF3I	CTNAG	6 cut(s)	27, 1206, 1815, 1866, 1883, 1896
HpySE526I	ACGT	6 cut(s)	98, 108, 129, 1453, 1522, 1890
Hsp92I	GRCGYC	1 cut(s)	98
Hsp92II	CATG	7 cut(s)	416, 1032, 1042, 1591, 1612, 1630, 1969
HspAI	GCGC	2 cut(s)	5, 942
Kzo9I	GATC	8 cut(s)	115, 334, 397, 463, 1045, 1067, 1807, 1925
LguI	GCTCTTC	1 cut(s)	1183
LmnI	GCTCC	1 cut(s)	77
LweI	GCATC	5 cut(s)	247, 781, 1497, 1630, 1713
MaeI	CTAG	4 cut(s)	264, 717, 798, 1050
MaeII	ACGT	6 cut(s)	98, 108, 129, 1453, 1522, 1890
MaeIII	GTNAC	4 cut(s)	91, 130, 1783, 1942
MalI	GATC	8 cut(s)	117, 336, 399, 465, 1047, 1069, 1809, 1927
MbiI	CCGCTC	1 cut(s)	1747
MboI	GATC	8 cut(s)	115, 334, 397, 463, 1045, 1067, 1807, 1925
MboII	GAAGA	7 cut(s)	524, 689, 877, 1109, 1193, 1200, 1814
MflI	RGATCY	1 cut(s)	1045
MhlI	GDGCHC	3 cut(s)	1114, 1387, 1463
MlsI	TGGCCA	1 cut(s)	474
MluCI	AATT	9 cut(s)	238, 379, 500, 701, 772, 827, 961, 1396, 1662
MluNI	TGGCCA	1 cut(s)	474
MlyI	GAGTC	2 cut(s)	671, 1844
Mox20I	TGGCCA	1 cut(s)	474
MscI	TGGCCA	1 cut(s)	474
MseI	TTAA	3 cut(s)	375, 557, 957
Msp20I	TGGCCA	1 cut(s)	474
MspA1I	CMGCKG	4 cut(s)	50, 56, 166, 1759
MspI	CCGG	1 cut(s)	72
MspR9I	CCNGG	7 cut(s)	1266, 1275, 1335, 1365, 1377, 1443, 1572
Mva1269I	GAATGC	3 cut(s)	37, 1082, 1797
MvaI	CCWGG	7 cut(s)	1266, 1275, 1335, 1365, 1377, 1443, 1572
MvnI	CGCG	3 cut(s)	41, 944, 1548
NdeI	CATATG	1 cut(s)	1603
NdeII	GATC	8 cut(s)	115, 334, 397, 463, 1045, 1067, 1807, 1925
NlaIII	CATG	7 cut(s)	416, 1032, 1042, 1591, 1612, 1630, 1969
NlaIV	GGNNCC	5 cut(s)	70, 1239, 1386, 1764, 1956
NmuCI	GTSAC	3 cut(s)	91, 130, 1942
NspI	RCATGY	2 cut(s)	1591, 1630
PaeI	GCATGC	1 cut(s)	1630
PaeR7I	CTCGAG	1 cut(s)	1832
PagI	TCATGA	1 cut(s)	1965
PaqCI	CACCTGC	1 cut(s)	1321
PceI	AGGCCT	1 cut(s)	1375
PciSI	GCTCTTC	1 cut(s)	1183
PctI	GAATGC	3 cut(s)	37, 1082, 1797
PfeI	GAWTC	5 cut(s)	137, 630, 652, 1338, 1735
PflFI	GACNNNGTC	1 cut(s)	97
PflMI	CCANNNNNTGG	1 cut(s)	1280
PleI	GAGTC	2 cut(s)	670, 1843
PpsI	GAGTC	2 cut(s)	670, 1843
Psp124BI	GAGCTC	1 cut(s)	1114
Psp1406I	AACGTT	1 cut(s)	1890
Psp6I	CCWGG	7 cut(s)	1264, 1273, 1333, 1363, 1375, 1441, 1570
PspFI	CCCAGC	3 cut(s)	166, 1653, 1726
PspGI	CCWGG	7 cut(s)	1264, 1273, 1333, 1363, 1375, 1441, 1570
PspN4I	GGNNCC	5 cut(s)	70, 1239, 1386, 1764, 1956
PspPI	GGNCC	6 cut(s)	306, 581, 859, 1271, 1307, 1562
PspXI	VCTCGAGB	1 cut(s)	1832
PsuI	RGATCY	1 cut(s)	1045
PsyI	GACNNNGTC	1 cut(s)	97
PvuII	CAGCTG	3 cut(s)	56, 166, 1759
RsaI	GTAC	5 cut(s)	323, 498, 613, 1259, 1599
RsaNI	GTAC	5 cut(s)	322, 497, 612, 1258, 1598
SacI	GAGCTC	1 cut(s)	1114
SapI	GCTCTTC	1 cut(s)	1183
SaqAI	TTAA	3 cut(s)	375, 557, 957
Sau3AI	GATC	8 cut(s)	115, 334, 397, 463, 1045, 1067, 1807, 1925
Sau96I	GGNCC	6 cut(s)	306, 581, 859, 1271, 1307, 1562
ScaI	AGTACT	1 cut(s)	613
SchI	GAGTC	2 cut(s)	671, 1844
ScrFI	CCNGG	7 cut(s)	1266, 1275, 1335, 1365, 1377, 1443, 1572
SduI	GDGCHC	3 cut(s)	1114, 1387, 1463
SfaNI	GCATC	5 cut(s)	247, 781, 1497, 1630, 1713
SfcI	CTRYAG	1 cut(s)	531
Sfr274I	CTCGAG	1 cut(s)	1832
SinI	GGWCC	3 cut(s)	581, 1271, 1562
SlaI	CTCGAG	1 cut(s)	1832
SmlI	CTYRAG	1 cut(s)	1832
SmoI	CTYRAG	1 cut(s)	1832
SpeI	ACTAGT	1 cut(s)	716
SphI	GCATGC	1 cut(s)	1630
Sse9I	AATT	9 cut(s)	238, 379, 500, 701, 772, 827, 961, 1396, 1662
SseBI	AGGCCT	1 cut(s)	1375
SspI	AATATT	1 cut(s)	1293
SspMI	CTAG	4 cut(s)	264, 717, 798, 1050
SstI	GAGCTC	1 cut(s)	1114
StuI	AGGCCT	1 cut(s)	1375
StyD4I	CCNGG	7 cut(s)	1264, 1273, 1333, 1363, 1375, 1441, 1570
StyI	CCWWGG	1 cut(s)	1514
TaaI	ACNGT	5 cut(s)	68, 611, 1301, 1562, 1650
TaiI	ACGT	6 cut(s)	101, 111, 132, 1456, 1525, 1893
TaqI	TCGA	2 cut(s)	1833, 1924
TasI	AATT	9 cut(s)	238, 379, 500, 701, 772, 827, 961, 1396, 1662
TatI	WGTACW	3 cut(s)	321, 496, 611
TauI	GCSGC	5 cut(s)	44, 53, 1225, 1617, 1626
TfiI	GAWTC	5 cut(s)	137, 630, 652, 1338, 1735
Tru1I	TTAA	3 cut(s)	375, 557, 957
Tru9I	TTAA	3 cut(s)	375, 557, 957
TscAI	CASTG	1 cut(s)	1653
TseFI	GTSAC	3 cut(s)	91, 130, 1942
Tsp45I	GTSAC	3 cut(s)	91, 130, 1942
TspDTI	ATGAA	5 cut(s)	929, 1139, 1814, 1954, 1966
TspGWI	ACGGA	1 cut(s)	1625
TspRI	CASTG	1 cut(s)	1653
Tth111I	GACNNNGTC	1 cut(s)	97
Van91I	CCANNNNNTGG	1 cut(s)	1280
VpaK11BI	GGWCC	3 cut(s)	581, 1271, 1562
XapI	RAATTY	5 cut(s)	379, 701, 827, 961, 1396
XceI	RCATGY	2 cut(s)	1591, 1630
XcmI	CCANNNNNNNNNTGG	1 cut(s)	721
XhoI	CTCGAG	1 cut(s)	1832
XmiI	GTMKAC	1 cut(s)	1527
XspI	CTAG	4 cut(s)	264, 717, 798, 1050
ZraI	GACGTC	1 cut(s)	99
ZrmI	AGTACT	1 cut(s)	613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.