Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0002657

Physical Location & Seq

Genomic Coordinates Forward (+)

7342323 .. 7348313

Gene Structure 5991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG072000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGCGCAAGCTCAGGTTCAGGGTCAGAATGCGAACGCCGCGGCGGCGGCTGCTGCGGCGGCGGCTAATGGTGGTGGGGCCAACCAGTTCGTGACGACGTCGCTTTACGTTGGGGATCTCGACCAGAACATTACGGATTCGCAGCTGTACGACCTGTTCAACCAGCTGGGTCAGGTCGTGTCTGTTAGGGTTTGCAGGGACTTGTCCACACGGAGGTCGCTTGGTTACGGCTATGTCAATTATAGCAACCCGCAGGATGCTGCTAGGGCATTGGATGTGTTGAACTTCACTCCTGTAAATGGAAGGCCCATTAGGATCATGTACTCTCACCGTGATCCTAGTATTCGTAAAAGTGGGTCTGGAAATATATTTATTAAGAATTTGGACAAAGCTCTTGATCACAAAGCCTTGCATGATACATTTTCTTCATTCGGAAACATCCTTTCTTGCAAGGTGGCAACAGACTCCTCTGGCCAGTCAAAGGGCTATGGCTTTGTGCAATTTGATAATGAAGAAGCTGCCCAAAAAGCTATTGCGAAGTTGAATGGTATGCTTATAAATGATAAGCAAGTTTTTGTAGGACCATTCCTCCGCAAACAGGAAAGGGAGGGTGTTGCTGACAAGTCAAAGTTCCAGAATGTTTATGTGAAGAATCTATCAGAATTGACTACTGAAGATGATTTTACCAAAATTTTTGGTGAATTTGGACCAATCACTAGCGTAGTGATCATGAGAGATCAAGATGGAAAATCAAAGTGCTTTGGATTTGTCAACTTTGATAATCCAGATGATGCTGCCAGAGCTGTTGAGGCTCTGAATGGAAAGAAATTTGATGATAAGGAGTGGTATGTTGGGAAGGCCCAGAAGAAATCTGAAAGGGAAAATGAATTGAAACTTCGATTTGAACAGAGCATGAAAGAGGCAGCAGACAAATATCAAGGAGCAAACTTGTATGTTAAAAATTTAGATGATAGCATAGTTGATGATAAACTTAAGGAGCTCTTCACTCCATTTGGCACAATTACCTCGTGTAAGGTCATGCGAGACCCCAACGGAGTAAGTAGGGGTTCCGGTTTTGTTGCATTCTCAACTCCTGAAGAGGCAAATAGAGCTCTGGCGGAGATGAATGGAAAAATGATTGTAAGCAAACCTCTCTATGTTGCACTTGCGCAACGAAAAGAAGATAGAAGAGCGAGGCTCCAGGCTCAGTTTTCTCAAATGCGGCCAGTTGCAATGGCACCTTCAGTTGCTCCTCGTATGCCAATGTACCCTCCTGGTGGTCCAGGTATTGGGCAGCAAATATTCTATGGTCAAGCCCCACCTGCTATCATTCCTTCCCAGGTAACAAGTTATTTTATCTCACTAAAGTTCACTCTCATCATCGTTTACGGTCTCACTGATTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006412 GO:0006413 GO:0006417 GO:0006446 GO:0006518 GO:0006807 GO:0006950 GO:0006970 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009628 GO:0009651 GO:0009889 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010608 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031329 GO:0032268 GO:0034248 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:1900151 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1903311 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

468

Amino Acids

51.52

Weight (kDa)

8.86

Isoelectric Point (pI)

30.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	35 - 105	8.2e-20	RNA recognition motif
RRM_1	PF00076	123 - 190	2.1e-21	RNA recognition motif
RRM_1	PF00076	214 - 282	5.2e-24	RNA recognition motif
RRM_1	PF00076	317 - 385	1.1e-19	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49760 AT1G49760 AT4G34110
fragaria_vesca	FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g34040 FvH4_2g34040 FvH4_2g34040 FvH4_6g37220
malus_domestica	MD00G1138300.v1.1 MD05G1085100.v1.1 MD08G1096400.v1.1 MD15G1079100.v1.1
prunus_persica	Prupe.1G432200_v2.0.a1 Prupe.1G432200_v2.0.a1 Prupe.8G129400_v2.0.a1 Prupe.8G129400_v2.0.a1
pyrus_communis	pycom05g08430 pycom08g07840 pycom10g07970 pycom15g07370
rosa_chinensis	RchiOBHm_Chr6g0256591 RchiOBHm_Chr6g0308331
rosa_laevigata	RLG00000010649 RLG00000014752
rosa_multiflora	Rmu_sc0003012.1_g000007
rosa_roxburghii	Rroxscaffold_7G00160250 Rroxscaffold_7G00209190
rosa_rugosa	Rorug05G0564800 Rorug06G0366200 Rorug06G0366200
rosa_samantha	Rh6AG082800 Rh6AG475400 Rh6BG077400 Rh6CG072000 Rh6DG477300
rosa_wichuraiana	Rw6G007450 Rw6G041440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	557, 1405
AarI	CACCTGC	1 cut(s)	1330
AatII	GACGTC	1 cut(s)	101
Acc16I	TGCGCA	1 cut(s)	1170
Acc36I	ACCTGC	1 cut(s)	1330
AccB1I	GGYRCC	1 cut(s)	1237
AccB7I	CCANNNNNTGG	1 cut(s)	1289
AccII	CGCG	1 cut(s)	41
AclWI	GGATC	3 cut(s)	123, 323, 329
AcoI	YGGCCR	2 cut(s)	472, 1223
AcsI	RAATTY	5 cut(s)	379, 690, 701, 827, 961
AcuI	CTGAAG	3 cut(s)	693, 1116, 1227
AcyI	GRCGYC	1 cut(s)	98
AfaI	GTAC	3 cut(s)	149, 323, 1268
AfiI	CCNNNNNNNGG	6 cut(s)	213, 299, 481, 598, 1277, 1289
AflII	CTTAAG	1 cut(s)	992
AgsI	TTSAA	5 cut(s)	160, 283, 544, 892, 905
AjnI	CCWGG	4 cut(s)	1200, 1273, 1282, 1338
AluBI	AGCT	9 cut(s)	11, 145, 166, 392, 518, 530, 803, 1000, 1112
AluI	AGCT	9 cut(s)	11, 145, 166, 392, 518, 530, 803, 1000, 1112
Alw21I	GWGCWC	2 cut(s)	1002, 1114
Alw26I	GTCTC	2 cut(s)	1038, 1397
AlwI	GGATC	3 cut(s)	123, 323, 329
AoxI	GGCC	5 cut(s)	78, 305, 472, 858, 1223
ApeKI	GCWGC	8 cut(s)	50, 53, 142, 260, 518, 794, 923, 1294
ApoI	RAATTY	5 cut(s)	379, 690, 701, 827, 961
AspLEI	GCGC	2 cut(s)	7, 1171
AspS9I	GGNCC	6 cut(s)	78, 306, 581, 707, 859, 1280
AsuHPI	GGTGA	2 cut(s)	320, 710
AvaII	GGWCC	3 cut(s)	581, 707, 1280
BalI	TGGCCA	1 cut(s)	474
BanI	GGYRCC	1 cut(s)	1237
BanII	GRGCYC	2 cut(s)	1002, 1114
BauI	CACGAG	1 cut(s)	1027
Bbv12I	GWGCWC	2 cut(s)	1002, 1114
BbvI	GCAGC	8 cut(s)	37, 40, 154, 247, 505, 781, 935, 1306
BccI	CCATC	1 cut(s)	737
BceAI	ACGGC	1 cut(s)	244
BciT130I	CCWGG	4 cut(s)	1202, 1275, 1284, 1340
BclI	TGATCA	2 cut(s)	397, 726
BcoDI	GTCTC	2 cut(s)	1038, 1397
BfaI	CTAG	3 cut(s)	264, 339, 717
BfrI	CTTAAG	1 cut(s)	992
BfuAI	ACCTGC	1 cut(s)	1330
BglI	GCCNNNNNGGC	1 cut(s)	44
Bme1390I	CCNGG	4 cut(s)	1202, 1275, 1284, 1340
Bme18I	GGWCC	3 cut(s)	581, 707, 1280
BmgT120I	GGNCC	6 cut(s)	78, 306, 581, 707, 859, 1280
BmiI	GGNNCC	4 cut(s)	79, 1069, 1199, 1239
BmrFI	CCNGG	4 cut(s)	1202, 1275, 1284, 1340
BmsI	GCATC	2 cut(s)	247, 781
BplI	GAGNNNNNCTC	2 cut(s)	1182, 1214
BpmI	CTGGAG	1 cut(s)	1184
Bpu10I	CCTNAGC	1 cut(s)	12
BsaHI	GRCGYC	1 cut(s)	98
BsaI	GGTCTC	2 cut(s)	1038, 1397
BsaJI	CCNNGG	2 cut(s)	39, 1338
BsaWI	WCCGGW	1 cut(s)	1070
BsaXI	ACNNNNNCTCC	2 cut(s)	573, 603
Bsc4I	CCNNNNNNNGG	6 cut(s)	213, 299, 481, 598, 1277, 1289
Bse1I	ACTGG	3 cut(s)	85, 475, 1226
Bse3DI	GCAATG	1 cut(s)	1239
BseBI	CCWGG	4 cut(s)	1202, 1275, 1284, 1340
BseDI	CCNNGG	2 cut(s)	39, 1338
BseGI	GGATG	3 cut(s)	262, 280, 438
BseLI	CCNNNNNNNGG	6 cut(s)	213, 299, 481, 598, 1277, 1289
BseMI	GCAATG	1 cut(s)	1239
BseMII	CTCAG	2 cut(s)	26, 1220
BseNI	ACTGG	3 cut(s)	85, 475, 1226
BseRI	GAGGAG	2 cut(s)	457, 1242
BseXI	GCAGC	8 cut(s)	37, 40, 154, 247, 505, 781, 935, 1306
BseYI	CCCAGC	1 cut(s)	166
Bsh1236I	CGCG	1 cut(s)	41
BshFI	GGCC	5 cut(s)	80, 307, 474, 860, 1225
BshNI	GGYRCC	1 cut(s)	1237
BsiHKAI	GWGCWC	2 cut(s)	1002, 1114
BsiSI	CCGG	1 cut(s)	1071
BslFI	GGGAC	1 cut(s)	212
BslI	CCNNNNNNNGG	6 cut(s)	213, 299, 481, 598, 1277, 1289
BsmAI	GTCTC	2 cut(s)	1038, 1397
BsmFI	GGGAC	1 cut(s)	212
BsmI	GAATGC	2 cut(s)	34, 1082
BsnI	GGCC	5 cut(s)	80, 307, 474, 860, 1225
Bso31I	GGTCTC	2 cut(s)	1038, 1397
Bsp1286I	GDGCHC	2 cut(s)	1002, 1114
Bsp143I	GATC	6 cut(s)	115, 315, 334, 397, 726, 736
BspANI	GGCC	5 cut(s)	80, 307, 474, 860, 1225
BspCNI	CTCAG	2 cut(s)	25, 1219
BspFNI	CGCG	1 cut(s)	41
BspHI	TCATGA	1 cut(s)	729
BspLI	GGNNCC	4 cut(s)	79, 1069, 1199, 1239
BspMI	ACCTGC	1 cut(s)	1330
BspPI	GGATC	3 cut(s)	123, 323, 329
BspQI	GCTCTTC	2 cut(s)	1007, 1183
BspT107I	GGYRCC	1 cut(s)	1237
BspTI	CTTAAG	1 cut(s)	992
BspTNI	GGTCTC	2 cut(s)	1038, 1397
BsrDI	GCAATG	1 cut(s)	1239
BsrI	ACTGG	3 cut(s)	85, 475, 1226
BssECI	CCNNGG	2 cut(s)	39, 1338
BssMI	GATC	6 cut(s)	115, 315, 334, 397, 726, 736
BssNI	GRCGYC	1 cut(s)	98
BssSI	CACGAG	1 cut(s)	1027
Bst2BI	CACGAG	1 cut(s)	1027
Bst2UI	CCWGG	4 cut(s)	1202, 1275, 1284, 1340
Bst4CI	ACNGT	2 cut(s)	332, 1391
Bst6I	CTCTTC	3 cut(s)	1007, 1092, 1183
BstACI	GRCGYC	1 cut(s)	98
BstAFI	CTTAAG	1 cut(s)	992
BstC8I	GCNNGC	1 cut(s)	9
BstDEI	CTNAG	2 cut(s)	12, 1206
BstDSI	CCRYGG	1 cut(s)	39
BstF5I	GGATG	3 cut(s)	262, 280, 438
BstFNI	CGCG	1 cut(s)	41
BstHHI	GCGC	2 cut(s)	7, 1171
BstKTI	GATC	6 cut(s)	118, 318, 337, 400, 729, 739
BstMAI	GTCTC	2 cut(s)	1038, 1397
BstMBI	GATC	6 cut(s)	115, 315, 334, 397, 726, 736
BstNI	CCWGG	4 cut(s)	1202, 1275, 1284, 1340
BstSCI	CCNGG	4 cut(s)	1200, 1273, 1282, 1338
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	8 cut(s)	37, 40, 154, 247, 505, 781, 935, 1306
BstX2I	RGATCY	1 cut(s)	115
BstYI	RGATCY	1 cut(s)	115
BsuRI	GGCC	5 cut(s)	80, 307, 474, 860, 1225
BtgI	CCRYGG	1 cut(s)	39
BtsCI	GGATG	3 cut(s)	262, 280, 438
BtsIMutI	CAGTG	1 cut(s)	1395
BveI	ACCTGC	1 cut(s)	1330
Cac8I	GCNNGC	1 cut(s)	9
CciI	TCATGA	1 cut(s)	729
CfoI	GCGC	2 cut(s)	7, 1171
Cfr13I	GGNCC	6 cut(s)	78, 306, 581, 707, 859, 1280
Cfr42I	CCGCGG	1 cut(s)	42
Csp6I	GTAC	3 cut(s)	148, 322, 1267
CviAII	CATG	5 cut(s)	319, 413, 730, 913, 1039
CviQI	GTAC	3 cut(s)	148, 322, 1267
DdeI	CTNAG	2 cut(s)	12, 1206
DpnI	GATC	6 cut(s)	117, 317, 336, 399, 728, 738
DpnII	GATC	6 cut(s)	115, 315, 334, 397, 726, 736
EaeI	YGGCCR	2 cut(s)	472, 1223
Eam1104I	CTCTTC	3 cut(s)	1007, 1092, 1183
EarI	CTCTTC	3 cut(s)	1007, 1092, 1183
EciI	GGCGGA	1 cut(s)	1133
Ecl136II	GAGCTC	2 cut(s)	1000, 1112
Eco24I	GRGCYC	2 cut(s)	1002, 1114
Eco31I	GGTCTC	2 cut(s)	1038, 1397
Eco47I	GGWCC	3 cut(s)	581, 707, 1280
Eco53kI	GAGCTC	2 cut(s)	1000, 1112
Eco57I	CTGAAG	3 cut(s)	693, 1116, 1227
EcoICRI	GAGCTC	2 cut(s)	1000, 1112
EcoRII	CCWGG	4 cut(s)	1200, 1273, 1282, 1338
EcoT38I	GRGCYC	2 cut(s)	1002, 1114
FaeI	CATG	5 cut(s)	322, 416, 733, 916, 1042
FalI	AAGNNNNNCTT	2 cut(s)	986, 1018
FaqI	GGGAC	1 cut(s)	212
FatI	CATG	5 cut(s)	318, 412, 729, 912, 1038
FauI	CCCGC	1 cut(s)	258
FbaI	TGATCA	2 cut(s)	397, 726
FokI	GGATG	3 cut(s)	269, 287, 425
FriOI	GRGCYC	2 cut(s)	1002, 1114
FspBI	CTAG	3 cut(s)	264, 339, 717
FspI	TGCGCA	1 cut(s)	1170
GlaI	GCGC	2 cut(s)	6, 1170
GsaI	CCCAGC	1 cut(s)	170
GsuI	CTGGAG	1 cut(s)	1184
HaeIII	GGCC	5 cut(s)	80, 307, 474, 860, 1225
HapII	CCGG	1 cut(s)	1071
HhaI	GCGC	2 cut(s)	7, 1171
Hin1I	GRCGYC	1 cut(s)	98
Hin1II	CATG	5 cut(s)	322, 416, 733, 916, 1042
Hin6I	GCGC	2 cut(s)	5, 1169
HinP1I	GCGC	2 cut(s)	5, 1169
HincII	GTYRAC	1 cut(s)	772
HindII	GTYRAC	1 cut(s)	772
HinfI	GANTC	3 cut(s)	137, 464, 652
HpaII	CCGG	1 cut(s)	1071
HphI	GGTGA	2 cut(s)	320, 710
Hpy166II	GTNNAC	4 cut(s)	207, 772, 1371, 1387
Hpy188I	TCNGA	5 cut(s)	27, 434, 661, 816, 874
Hpy188III	TCNNGA	9 cut(s)	91, 119, 360, 395, 634, 730, 740, 785, 1094
Hpy8I	GTNNAC	4 cut(s)	207, 772, 1371, 1387
Hpy99I	CGWCG	2 cut(s)	100, 103
HpyAV	CCTTC	4 cut(s)	297, 850, 1251, 1344
HpyCH4III	ACNGT	2 cut(s)	332, 1391
HpyCH4IV	ACGT	2 cut(s)	98, 108
HpyCH4V	TGCA	7 cut(s)	195, 412, 450, 499, 1082, 1163, 1232
HpyF3I	CTNAG	2 cut(s)	12, 1206
HpySE526I	ACGT	2 cut(s)	98, 108
Hsp92I	GRCGYC	1 cut(s)	98
Hsp92II	CATG	5 cut(s)	322, 416, 733, 916, 1042
HspAI	GCGC	2 cut(s)	5, 1169
Ksp22I	TGATCA	2 cut(s)	397, 726
KspI	CCGCGG	1 cut(s)	42
Kzo9I	GATC	6 cut(s)	115, 315, 334, 397, 726, 736
LguI	GCTCTTC	2 cut(s)	1007, 1183
LmnI	GCTCC	4 cut(s)	941, 997, 1203, 1255
Lsp1109I	GCAGC	8 cut(s)	37, 40, 154, 247, 505, 781, 935, 1306
LweI	GCATC	2 cut(s)	247, 781
MaeI	CTAG	3 cut(s)	264, 339, 717
MaeII	ACGT	2 cut(s)	98, 108
MaeIII	GTNAC	3 cut(s)	91, 224, 1342
MalI	GATC	6 cut(s)	117, 317, 336, 399, 728, 738
MboI	GATC	6 cut(s)	115, 315, 334, 397, 726, 736
MboII	GAAGA	9 cut(s)	417, 524, 661, 686, 877, 994, 1109, 1193, 1200
MflI	RGATCY	1 cut(s)	115
MhlI	GDGCHC	2 cut(s)	1002, 1114
MlsI	TGGCCA	1 cut(s)	474
MluNI	TGGCCA	1 cut(s)	474
MlyI	GAGTC	1 cut(s)	458
Mox20I	TGGCCA	1 cut(s)	474
MscI	TGGCCA	1 cut(s)	474
MseI	TTAA	3 cut(s)	375, 957, 993
Msp20I	TGGCCA	1 cut(s)	474
MspA1I	CMGCKG	3 cut(s)	41, 145, 166
MspCI	CTTAAG	1 cut(s)	992
MspI	CCGG	1 cut(s)	1071
MspR9I	CCNGG	4 cut(s)	1202, 1275, 1284, 1340
Mva1269I	GAATGC	2 cut(s)	34, 1082
MvaI	CCWGG	4 cut(s)	1202, 1275, 1284, 1340
MvnI	CGCG	1 cut(s)	41
NdeII	GATC	6 cut(s)	115, 315, 334, 397, 726, 736
NlaIII	CATG	5 cut(s)	322, 416, 733, 916, 1042
NlaIV	GGNNCC	4 cut(s)	79, 1069, 1199, 1239
NmuCI	GTSAC	1 cut(s)	91
NsbI	TGCGCA	1 cut(s)	1170
PagI	TCATGA	1 cut(s)	729
PaqCI	CACCTGC	1 cut(s)	1330
PciSI	GCTCTTC	2 cut(s)	1007, 1183
PctI	GAATGC	2 cut(s)	34, 1082
PfeI	GAWTC	2 cut(s)	137, 652
PflFI	GACNNNGTC	1 cut(s)	97
PflMI	CCANNNNNTGG	1 cut(s)	1289
PleI	GAGTC	1 cut(s)	458
PpsI	GAGTC	1 cut(s)	458
PsiI	TTATAA	2 cut(s)	557, 1405
Psp124BI	GAGCTC	2 cut(s)	1002, 1114
Psp6I	CCWGG	4 cut(s)	1200, 1273, 1282, 1338
PspFI	CCCAGC	1 cut(s)	166
PspGI	CCWGG	4 cut(s)	1200, 1273, 1282, 1338
PspN4I	GGNNCC	4 cut(s)	79, 1069, 1199, 1239
PspPI	GGNCC	6 cut(s)	78, 306, 581, 707, 859, 1280
PsrI	GAACNNNNNNTAC	2 cut(s)	140, 172
PsuI	RGATCY	1 cut(s)	115
PsyI	GACNNNGTC	1 cut(s)	97
PvuII	CAGCTG	2 cut(s)	145, 166
RsaI	GTAC	3 cut(s)	149, 323, 1268
RsaNI	GTAC	3 cut(s)	148, 322, 1267
SacI	GAGCTC	2 cut(s)	1002, 1114
SacII	CCGCGG	1 cut(s)	42
SapI	GCTCTTC	2 cut(s)	1007, 1183
SaqAI	TTAA	3 cut(s)	375, 957, 993
Sau3AI	GATC	6 cut(s)	115, 315, 334, 397, 726, 736
Sau96I	GGNCC	6 cut(s)	78, 306, 581, 707, 859, 1280
SchI	GAGTC	1 cut(s)	458
ScrFI	CCNGG	4 cut(s)	1202, 1275, 1284, 1340
SduI	GDGCHC	2 cut(s)	1002, 1114
SfaNI	GCATC	2 cut(s)	247, 781
Sfr303I	CCGCGG	1 cut(s)	42
SgrBI	CCGCGG	1 cut(s)	42
SinI	GGWCC	3 cut(s)	581, 707, 1280
SmlI	CTYRAG	1 cut(s)	992
SmoI	CTYRAG	1 cut(s)	992
SspI	AATATT	1 cut(s)	1302
SspMI	CTAG	3 cut(s)	264, 339, 717
SstI	GAGCTC	2 cut(s)	1002, 1114
StyD4I	CCNGG	4 cut(s)	1200, 1273, 1282, 1338
TaaI	ACNGT	2 cut(s)	332, 1391
TaiI	ACGT	2 cut(s)	101, 111
TaqI	TCGA	2 cut(s)	120, 898
TatI	WGTACW	1 cut(s)	321
TauI	GCSGC	8 cut(s)	41, 44, 47, 50, 59, 62, 65, 1225
TfiI	GAWTC	2 cut(s)	137, 652
Tru1I	TTAA	3 cut(s)	375, 957, 993
Tru9I	TTAA	3 cut(s)	375, 957, 993
TscAI	CASTG	1 cut(s)	1402
TseFI	GTSAC	1 cut(s)	91
TseI	GCWGC	8 cut(s)	50, 53, 142, 260, 518, 794, 923, 1294
Tsp45I	GTSAC	1 cut(s)	91
TspDTI	ATGAA	5 cut(s)	417, 525, 900, 929, 1139
TspGWI	ACGGA	3 cut(s)	149, 226, 1068
TspRI	CASTG	1 cut(s)	1402
Tth111I	GACNNNGTC	1 cut(s)	97
Van91I	CCANNNNNTGG	1 cut(s)	1289
Vha464I	CTTAAG	1 cut(s)	992
VpaK11BI	GGWCC	3 cut(s)	581, 707, 1280
XapI	RAATTY	5 cut(s)	379, 690, 701, 827, 961
XspI	CTAG	3 cut(s)	264, 339, 717
ZraI	GACGTC	1 cut(s)	99

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.