Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002657

Physical Location & Seq

Genomic Coordinates Reverse (-)

59463996 .. 59468809

Gene Structure 4814 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00209190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGGCGCAAGCTCAGGTTCAGGGTCAGAATGCGAACGCGGCTGCGGCGGCAGCTAATGGTGGTGGGGCCAACCAGTTCGTGACGACATCGCTTTACGTTGGGGATCTCGACCAGAACATTACGGATTCGCAGCTGTACGACCTGTTCAACCAGCTGGGTCAGGTCGTGTCTGTTAGGGTTTGCAGGGACTTGTCCACCCGGAGGTCGCTTGGTTACGGCTATGTCAATTATAGCAACCCGCAGGACGCTGCTAGGGCATTGGATATGTTGAACTTCACTCCTGTAAATGGAAGGCCCATTAGGATCATGTACTCTCTCACCTTTGATCAGTCCTTGCTGACACTTTCAGTTGTATCAATTTGGCAGAATTTGGACAAAGCTCTTGATCACAAAGCCTTGCATGATACATTTTCTTCATTTGGAAACATCCTTTCTTGCAAGGTGGCAACGGACTCCTCTGGCCAGTCAAAGGGCTATGGCTTTGTGCAATTTGATAATGAAGAAGCTGCCCAAAAAGCTATTGCAAAGTTGAATGGTATGCTTATAAATGATAAGCAAGTTTTTGTAGGACCATTCCTCCGCAAGCAGGAAAGGGAGGGTGTTGCTGACAAGTCAAAATTCCAGAATGTTTATGTGAAGAATCTATCAGAATCGACTACTGAAGATGATTTTACCAAAATTTTTGGTGAATTTGGACCAATCACTAGCGTAGTGATCATGAGAGATCAAGATGGAAAATCAAAGTGCTTTGGATTTGTCAACTTTGATAATCCAGATGATGCTGCCAGAGCTGTTGAGGCTCTGAATGGAAAGAAATTTGATGATAAGGAGTGGTATGTTGGGAAGGCCCAGAAGAAATCTGAAAGGGAAAATGAATTGAAACTTCGATTTGAACAGAGCATGAAAGAGGCAGCAGACAAATATCAAGGAGCAAACTTGTATGTTAAAAATTTAGATGATAGCATAGTTGATGATAAACTTAAGGAGCTCTTCACTCCATTTGGCACAATTACCTCGTGTAAGGTCATGCGAGACCCCAACGGAGTAAGTAGGGGTTCCGGTTTTGTTGCATTCTCAACTCCTGAAGAGGCAAATAGAGCTCTCGCGGAGATGAATGGAAAAATGATTGTAAGCAAACCTCTCTATGTTGCACTTGCGCAACGAAAAGAAGATAGAAGAGCGAGGCTCCAGGTGCGTTCGGCTCAGTTTTCTCAAATGCGGCCAGTTGCAATGGCACCTTCAGTTGCTCCTCGTATGCCAATGTACCCTCCTGGTGGTCCTGGCATTGGGCAGCAAATATTCTATGGTCAAGCCCCACCTGCTATCATTCCCTCCCAGCCTGGATTTGGATATCAACAGCAGCTTGTTCCTGGTATGAGACCTGGTGGTGCTCCCATGCCAAACTTCTTTGTGCCAATGGTTCAGCAGGGGCAGCAAGGGCAGCGCCCTGGTGGCAGACGTGCAGGCCCTGCACAGCCAAACCAGCAACCAGTTCCATTAATGCAACAGCAGATGCTTCCAAGAGGGCGTGTCTATCGTTACCCGTCTGGGCGTGCTCTGCCTGATGGTCCCATGTCTGGTGTTGCTGGAGGCATGTTTTCTGTTCCATATGACTTGTCTGGCATGCCATTGCGTGATCCAGCACTGTCTCAGCCTGTTCCAATTGGGACTTTGGCTAGTGCCCTTGCAAATGCTACACCGGAGCAGCAAAGGACGATGCTGGGGGAGAATCTTTACCCACTGGTGGAACAGCTGGAACCTGACAATGCAGCGAAGGTTACTGGCATGCTTCTTGAGATGGATCAAACTGAGGTTCTGCATTTGCTCGAGTCACCTGAAGCTTTGAAAGCAAAGGTGGCTGAAGCTATGGAGGTTCTGAGGAATGTTGCTCAGCAGCAGCAAGCTGGCGGTGCAGCTGATCAACTAGCCTCATTGTCGCTCAATGATAATCTTGTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006412 GO:0006413 GO:0006417 GO:0006446 GO:0006518 GO:0006807 GO:0006950 GO:0006970 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009628 GO:0009651 GO:0009889 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010608 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031329 GO:0032268 GO:0034248 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:1900151 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1903311 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

653

Amino Acids

71.31

Weight (kDa)

6.88

Isoelectric Point (pI)

40.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	31 - 101	5.2e-20	RNA recognition motif
RRM_1	PF00076	123 - 186	9.9e-19	RNA recognition motif
RRM_1	PF00076	210 - 278	1.4e-24	RNA recognition motif
RRM_1	PF00076	313 - 381	1.8e-19	RNA recognition motif
MLLE	PF00658	561 - 626	4.3e-30	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49760 AT1G49760 AT4G34110
fragaria_vesca	FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g34040 FvH4_2g34040 FvH4_2g34040 FvH4_6g37220
malus_domestica	MD00G1138300.v1.1 MD05G1085100.v1.1 MD08G1096400.v1.1 MD15G1079100.v1.1
prunus_persica	Prupe.1G432200_v2.0.a1 Prupe.1G432200_v2.0.a1 Prupe.8G129400_v2.0.a1 Prupe.8G129400_v2.0.a1
pyrus_communis	pycom05g08430 pycom08g07840 pycom10g07970 pycom15g07370
rosa_chinensis	RchiOBHm_Chr6g0256591 RchiOBHm_Chr6g0308331
rosa_laevigata	RLG00000010649 RLG00000014752
rosa_multiflora	Rmu_sc0003012.1_g000007
rosa_roxburghii	Rroxscaffold_7G00160250 Rroxscaffold_7G00209190
rosa_rugosa	Rorug05G0564800 Rorug06G0366200 Rorug06G0366200
rosa_samantha	Rh6AG082800 Rh6AG475400 Rh6BG077400 Rh6CG072000 Rh6DG477300
rosa_wichuraiana	Rw6G007450 Rw6G041440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	545
AarI	CACCTGC	1 cut(s)	1327
Acc16I	TGCGCA	1 cut(s)	1158
Acc36I	ACCTGC	1 cut(s)	1327
AccB1I	GGYRCC	1 cut(s)	1234
AccII	CGCG	2 cut(s)	38, 1106
AciI	CCGC	8 cut(s)	38, 44, 47, 239, 580, 1106, 1219, 1908
AclWI	GGATC	4 cut(s)	111, 311, 1631, 1809
AcoI	YGGCCR	2 cut(s)	460, 1220
AcsI	RAATTY	6 cut(s)	367, 617, 678, 689, 815, 949
AcuI	CTGAAG	5 cut(s)	681, 1104, 1224, 1857, 1881
AfaI	GTAC	3 cut(s)	137, 311, 1265
AfiI	CCNNNNNNNGG	9 cut(s)	201, 287, 469, 586, 1274, 1286, 1346, 1577, 1744
AflII	CTTAAG	1 cut(s)	980
AgsI	TTSAA	6 cut(s)	148, 271, 532, 880, 893, 1846
AjiI	CACGTC	1 cut(s)	1460
AjnI	CCWGG	7 cut(s)	1188, 1270, 1279, 1339, 1369, 1381, 1447
Alw21I	GWGCWC	4 cut(s)	990, 1102, 1393, 1558
Alw26I	GTCTC	3 cut(s)	1026, 1372, 1653
AlwI	GGATC	4 cut(s)	111, 311, 1631, 1809
AlwNI	CAGNNNCTG	1 cut(s)	1469
Ama87I	CYCGRG	1 cut(s)	1826
AoxI	GGCC	6 cut(s)	66, 293, 460, 846, 1220, 1465
ApoI	RAATTY	6 cut(s)	367, 617, 678, 689, 815, 949
AseI	ATTAAT	1 cut(s)	1499
AspLEI	GCGC	3 cut(s)	7, 1159, 1446
AspS9I	GGNCC	8 cut(s)	66, 294, 569, 695, 847, 1277, 1466, 1568
AsuC2I	CCSGG	1 cut(s)	199
AsuHPI	GGTGA	3 cut(s)	310, 698, 1824
AvaI	CYCGRG	1 cut(s)	1826
AvaII	GGWCC	4 cut(s)	569, 695, 1277, 1568
BaeGI	GKGCMC	1 cut(s)	1684
BalI	TGGCCA	1 cut(s)	462
BanI	GGYRCC	1 cut(s)	1234
BanII	GRGCYC	2 cut(s)	990, 1102
BauI	CACGAG	1 cut(s)	1015
Bbv12I	GWGCWC	4 cut(s)	990, 1102, 1393, 1558
BccI	CCATC	3 cut(s)	725, 1559, 1792
BceAI	ACGGC	1 cut(s)	232
BciT130I	CCWGG	7 cut(s)	1190, 1272, 1281, 1341, 1371, 1383, 1449
BclI	TGATCA	4 cut(s)	325, 385, 714, 1918
BcnI	CCSGG	1 cut(s)	199
BcoDI	GTCTC	3 cut(s)	1026, 1372, 1653
BfaI	CTAG	4 cut(s)	252, 705, 1677, 1925
BfoI	RGCGCY	1 cut(s)	1447
BfrI	CTTAAG	1 cut(s)	980
BfuAI	ACCTGC	1 cut(s)	1327
BglI	GCCNNNNNGGC	1 cut(s)	1452
BlpI	GCTNAGC	1 cut(s)	1890
Bme1390I	CCNGG	8 cut(s)	199, 1190, 1272, 1281, 1341, 1371, 1383, 1449
Bme18I	GGWCC	4 cut(s)	569, 695, 1277, 1568
BmeT110I	CYCGRG	1 cut(s)	1826
BmgBI	CACGTC	1 cut(s)	1460
BmgT120I	GGNCC	8 cut(s)	66, 294, 569, 695, 847, 1277, 1466, 1568
BmiI	GGNNCC	6 cut(s)	67, 1057, 1187, 1236, 1570, 1758
BmrFI	CCNGG	8 cut(s)	199, 1190, 1272, 1281, 1341, 1371, 1383, 1449
BmsI	GCATC	3 cut(s)	769, 1503, 1707
BplI	GAGNNNNNCTC	2 cut(s)	1170, 1202
BpmI	CTGGAG	2 cut(s)	1172, 1608
Bpu10I	CCTNAGC	1 cut(s)	12
Bpu1102I	GCTNAGC	1 cut(s)	1890
BpuEI	CTTGAG	1 cut(s)	1814
BpuMI	CCSGG	1 cut(s)	199
BsaI	GGTCTC	2 cut(s)	1026, 1372
BsaJI	CCNNGG	1 cut(s)	1447
BsaWI	WCCGGW	2 cut(s)	1058, 1699
BsaXI	ACNNNNNCTCC	2 cut(s)	561, 591
Bsc4I	CCNNNNNNNGG	9 cut(s)	201, 287, 469, 586, 1274, 1286, 1346, 1577, 1744
Bse1I	ACTGG	6 cut(s)	73, 463, 1223, 1490, 1746, 1786
Bse3DI	GCAATG	2 cut(s)	1236, 1628
BseBI	CCWGG	7 cut(s)	1190, 1272, 1281, 1341, 1371, 1383, 1449
BseDI	CCNNGG	1 cut(s)	1447
BseGI	GGATG	1 cut(s)	426
BseLI	CCNNNNNNNGG	9 cut(s)	201, 287, 469, 586, 1274, 1286, 1346, 1577, 1744
BseMI	GCAATG	2 cut(s)	1236, 1628
BseMII	CTCAG	6 cut(s)	26, 1217, 1664, 1800, 1868, 1904
BseNI	ACTGG	6 cut(s)	73, 463, 1223, 1490, 1746, 1786
BseRI	GAGGAG	2 cut(s)	445, 1239
BseSI	GKGCMC	1 cut(s)	1684
BseYI	CCCAGC	3 cut(s)	154, 1335, 1720
BsgI	GTGCAG	3 cut(s)	1455, 1482, 1932
Bsh1236I	CGCG	2 cut(s)	38, 1106
BshFI	GGCC	6 cut(s)	68, 295, 462, 848, 1222, 1467
BshNI	GGYRCC	1 cut(s)	1234
BsiHKAI	GWGCWC	4 cut(s)	990, 1102, 1393, 1558
BsiHKCI	CYCGRG	1 cut(s)	1826
BsiSI	CCGG	3 cut(s)	199, 1059, 1700
BslFI	GGGAC	3 cut(s)	200, 1554, 1681
BslI	CCNNNNNNNGG	9 cut(s)	201, 287, 469, 586, 1274, 1286, 1346, 1577, 1744
BsmAI	GTCTC	3 cut(s)	1026, 1372, 1653
BsmFI	GGGAC	3 cut(s)	200, 1554, 1681
BsmI	GAATGC	2 cut(s)	34, 1070
BsnI	GGCC	6 cut(s)	68, 295, 462, 848, 1222, 1467
Bso31I	GGTCTC	2 cut(s)	1026, 1372
BsoBI	CYCGRG	1 cut(s)	1826
Bsp1286I	GDGCHC	5 cut(s)	990, 1102, 1393, 1558, 1684
Bsp143I	GATC	9 cut(s)	103, 303, 325, 385, 714, 724, 1636, 1801, 1918
Bsp1720I	GCTNAGC	1 cut(s)	1890
BspACI	CCGC	8 cut(s)	38, 44, 47, 239, 580, 1106, 1219, 1908
BspANI	GGCC	6 cut(s)	68, 295, 462, 848, 1222, 1467
BspCNI	CTCAG	6 cut(s)	25, 1216, 1663, 1801, 1869, 1903
BspFNI	CGCG	2 cut(s)	38, 1106
BspHI	TCATGA	1 cut(s)	717
BspLI	GGNNCC	6 cut(s)	67, 1057, 1187, 1236, 1570, 1758
BspMI	ACCTGC	1 cut(s)	1327
BspPI	GGATC	4 cut(s)	111, 311, 1631, 1809
BspQI	GCTCTTC	2 cut(s)	995, 1171
BspT107I	GGYRCC	1 cut(s)	1234
BspTI	CTTAAG	1 cut(s)	980
BspTNI	GGTCTC	2 cut(s)	1026, 1372
BsrDI	GCAATG	2 cut(s)	1236, 1628
BsrI	ACTGG	6 cut(s)	73, 463, 1223, 1490, 1746, 1786
BssECI	CCNNGG	1 cut(s)	1447
BssMI	GATC	9 cut(s)	103, 303, 325, 385, 714, 724, 1636, 1801, 1918
BssSI	CACGAG	1 cut(s)	1015
Bst2BI	CACGAG	1 cut(s)	1015
Bst2UI	CCWGG	7 cut(s)	1190, 1272, 1281, 1341, 1371, 1383, 1449
Bst4CI	ACNGT	1 cut(s)	1647
Bst6I	CTCTTC	3 cut(s)	995, 1080, 1171
BstAFI	CTTAAG	1 cut(s)	980
BstAPI	GCANNNNNTGC	1 cut(s)	1469
BstC8I	GCNNGC	8 cut(s)	9, 584, 1465, 1554, 1625, 1787, 1902, 1906
BstDEI	CTNAG	6 cut(s)	12, 1203, 1650, 1809, 1877, 1890
BstF5I	GGATG	1 cut(s)	426
BstFNI	CGCG	2 cut(s)	38, 1106
BstH2I	RGCGCY	1 cut(s)	1447
BstHHI	GCGC	3 cut(s)	7, 1159, 1446
BstKTI	GATC	9 cut(s)	106, 306, 328, 388, 717, 727, 1639, 1804, 1921
BstMAI	GTCTC	3 cut(s)	1026, 1372, 1653
BstMBI	GATC	9 cut(s)	103, 303, 325, 385, 714, 724, 1636, 1801, 1918
BstNI	CCWGG	7 cut(s)	1190, 1272, 1281, 1341, 1371, 1383, 1449
BstNSI	RCATGY	3 cut(s)	1597, 1627, 1789
BstSCI	CCNGG	8 cut(s)	197, 1188, 1270, 1279, 1339, 1369, 1381, 1447
BstSLI	GKGCMC	1 cut(s)	1684
BstUI	CGCG	2 cut(s)	38, 1106
BstX2I	RGATCY	1 cut(s)	103
BstYI	RGATCY	1 cut(s)	103
BsuRI	GGCC	6 cut(s)	68, 295, 462, 848, 1222, 1467
BtgZI	GCGATG	1 cut(s)	72
BtrI	CACGTC	1 cut(s)	1460
BtsCI	GGATG	1 cut(s)	426
BtsIMutI	CAGTG	2 cut(s)	1643, 1739
BveI	ACCTGC	1 cut(s)	1327
Cac8I	GCNNGC	8 cut(s)	9, 584, 1465, 1554, 1625, 1787, 1902, 1906
CaiI	CAGNNNCTG	1 cut(s)	1469
CciI	TCATGA	1 cut(s)	717
CfoI	GCGC	3 cut(s)	7, 1159, 1446
Cfr13I	GGNCC	8 cut(s)	66, 294, 569, 695, 847, 1277, 1466, 1568
CseI	GACGC	1 cut(s)	254
CsiI	ACCWGGT	1 cut(s)	1381
Csp6I	GTAC	3 cut(s)	136, 310, 1264
CviQI	GTAC	3 cut(s)	136, 310, 1264
DdeI	CTNAG	6 cut(s)	12, 1203, 1650, 1809, 1877, 1890
DpnI	GATC	9 cut(s)	105, 305, 327, 387, 716, 726, 1638, 1803, 1920
DpnII	GATC	9 cut(s)	103, 303, 325, 385, 714, 724, 1636, 1801, 1918
EaeI	YGGCCR	2 cut(s)	460, 1220
Eam1104I	CTCTTC	3 cut(s)	995, 1080, 1171
EarI	CTCTTC	3 cut(s)	995, 1080, 1171
Ecl136II	GAGCTC	2 cut(s)	988, 1100
Eco24I	GRGCYC	2 cut(s)	990, 1102
Eco31I	GGTCTC	2 cut(s)	1026, 1372
Eco32I	GATATC	1 cut(s)	1352
Eco47I	GGWCC	4 cut(s)	569, 695, 1277, 1568
Eco53kI	GAGCTC	2 cut(s)	988, 1100
Eco57I	CTGAAG	5 cut(s)	681, 1104, 1224, 1857, 1881
Eco88I	CYCGRG	1 cut(s)	1826
EcoICRI	GAGCTC	2 cut(s)	988, 1100
EcoO109I	RGGNCCY	1 cut(s)	1466
EcoRII	CCWGG	7 cut(s)	1188, 1270, 1279, 1339, 1369, 1381, 1447
EcoRV	GATATC	1 cut(s)	1352
EcoT38I	GRGCYC	2 cut(s)	990, 1102
FalI	AAGNNNNNCTT	2 cut(s)	974, 1006
FaqI	GGGAC	3 cut(s)	200, 1554, 1681
FauI	CCCGC	1 cut(s)	246
FauNDI	CATATG	1 cut(s)	1609
FbaI	TGATCA	4 cut(s)	325, 385, 714, 1918
FokI	GGATG	1 cut(s)	413
FriOI	GRGCYC	2 cut(s)	990, 1102
FspBI	CTAG	4 cut(s)	252, 705, 1677, 1925
FspI	TGCGCA	1 cut(s)	1158
GlaI	GCGC	3 cut(s)	6, 1158, 1445
GsaI	CCCAGC	3 cut(s)	158, 1339, 1724
GsuI	CTGGAG	2 cut(s)	1172, 1608
HaeII	RGCGCY	1 cut(s)	1447
HaeIII	GGCC	6 cut(s)	68, 295, 462, 848, 1222, 1467
HapII	CCGG	3 cut(s)	199, 1059, 1700
HgaI	GACGC	1 cut(s)	254
HhaI	GCGC	3 cut(s)	7, 1159, 1446
Hin6I	GCGC	3 cut(s)	5, 1157, 1444
HinP1I	GCGC	3 cut(s)	5, 1157, 1444
HincII	GTYRAC	1 cut(s)	760
HindII	GTYRAC	1 cut(s)	760
HindIII	AAGCTT	1 cut(s)	1839
HinfI	GANTC	6 cut(s)	125, 452, 640, 650, 1729, 1829
HpaII	CCGG	3 cut(s)	199, 1059, 1700
HphI	GGTGA	3 cut(s)	310, 698, 1824
Hpy166II	GTNNAC	2 cut(s)	195, 760
Hpy188I	TCNGA	5 cut(s)	27, 649, 804, 862, 1878
Hpy8I	GTNNAC	2 cut(s)	195, 760
HpyAV	CCTTC	4 cut(s)	285, 838, 1248, 1768
HpyCH4III	ACNGT	1 cut(s)	1647
HpyCH4IV	ACGT	2 cut(s)	96, 1459
HpyF3I	CTNAG	6 cut(s)	12, 1203, 1650, 1809, 1877, 1890
HpySE526I	ACGT	2 cut(s)	96, 1459
HspAI	GCGC	3 cut(s)	5, 1157, 1444
Ksp22I	TGATCA	4 cut(s)	325, 385, 714, 1918
Kzo9I	GATC	9 cut(s)	103, 303, 325, 385, 714, 724, 1636, 1801, 1918
LguI	GCTCTTC	2 cut(s)	995, 1171
LmnI	GCTCC	6 cut(s)	929, 985, 1191, 1252, 1396, 1702
LweI	GCATC	3 cut(s)	769, 1503, 1707
MabI	ACCWGGT	1 cut(s)	1381
MaeI	CTAG	4 cut(s)	252, 705, 1677, 1925
MaeII	ACGT	2 cut(s)	96, 1459
MaeIII	GTNAC	5 cut(s)	79, 212, 1538, 1777, 1830
MalI	GATC	9 cut(s)	105, 305, 327, 387, 716, 726, 1638, 1803, 1920
MboI	GATC	9 cut(s)	103, 303, 325, 385, 714, 724, 1636, 1801, 1918
MboII	GAAGA	9 cut(s)	405, 512, 649, 674, 865, 982, 1097, 1181, 1188
MfeI	CAATTG	1 cut(s)	1662
MflI	RGATCY	1 cut(s)	103
MhlI	GDGCHC	5 cut(s)	990, 1102, 1393, 1558, 1684
MlsI	TGGCCA	1 cut(s)	462
MluNI	TGGCCA	1 cut(s)	462
MlyI	GAGTC	2 cut(s)	446, 1838
Mox20I	TGGCCA	1 cut(s)	462
MscI	TGGCCA	1 cut(s)	462
MseI	TTAA	3 cut(s)	945, 981, 1499
Msp20I	TGGCCA	1 cut(s)	462
MspA1I	CMGCKG	4 cut(s)	133, 154, 1753, 1916
MspCI	CTTAAG	1 cut(s)	980
MspI	CCGG	3 cut(s)	199, 1059, 1700
MspR9I	CCNGG	8 cut(s)	199, 1190, 1272, 1281, 1341, 1371, 1383, 1449
MunI	CAATTG	1 cut(s)	1662
Mva1269I	GAATGC	2 cut(s)	34, 1070
MvaI	CCWGG	7 cut(s)	1190, 1272, 1281, 1341, 1371, 1383, 1449
MvnI	CGCG	2 cut(s)	38, 1106
NciI	CCSGG	1 cut(s)	199
NdeI	CATATG	1 cut(s)	1609
NdeII	GATC	9 cut(s)	103, 303, 325, 385, 714, 724, 1636, 1801, 1918
NlaIV	GGNNCC	6 cut(s)	67, 1057, 1187, 1236, 1570, 1758
NmuCI	GTSAC	2 cut(s)	79, 1830
NsbI	TGCGCA	1 cut(s)	1158
NspI	RCATGY	3 cut(s)	1597, 1627, 1789
PaeI	GCATGC	2 cut(s)	1627, 1789
PaeR7I	CTCGAG	1 cut(s)	1826
PagI	TCATGA	1 cut(s)	717
PaqCI	CACCTGC	1 cut(s)	1327
PciSI	GCTCTTC	2 cut(s)	995, 1171
PctI	GAATGC	2 cut(s)	34, 1070
PfeI	GAWTC	4 cut(s)	125, 640, 650, 1729
PleI	GAGTC	2 cut(s)	446, 1837
PpsI	GAGTC	2 cut(s)	446, 1837
PshBI	ATTAAT	1 cut(s)	1499
PsiI	TTATAA	1 cut(s)	545
Psp124BI	GAGCTC	2 cut(s)	990, 1102
Psp6I	CCWGG	7 cut(s)	1188, 1270, 1279, 1339, 1369, 1381, 1447
PspFI	CCCAGC	3 cut(s)	154, 1335, 1720
PspGI	CCWGG	7 cut(s)	1188, 1270, 1279, 1339, 1369, 1381, 1447
PspN4I	GGNNCC	6 cut(s)	67, 1057, 1187, 1236, 1570, 1758
PspPI	GGNCC	8 cut(s)	66, 294, 569, 695, 847, 1277, 1466, 1568
PspXI	VCTCGAGB	1 cut(s)	1826
PsrI	GAACNNNNNNTAC	2 cut(s)	128, 160
PstNI	CAGNNNCTG	1 cut(s)	1469
PsuI	RGATCY	1 cut(s)	103
PvuII	CAGCTG	4 cut(s)	133, 154, 1753, 1916
RsaI	GTAC	3 cut(s)	137, 311, 1265
RsaNI	GTAC	3 cut(s)	136, 310, 1264
SacI	GAGCTC	2 cut(s)	990, 1102
SapI	GCTCTTC	2 cut(s)	995, 1171
SaqAI	TTAA	3 cut(s)	945, 981, 1499
Sau3AI	GATC	9 cut(s)	103, 303, 325, 385, 714, 724, 1636, 1801, 1918
Sau96I	GGNCC	8 cut(s)	66, 294, 569, 695, 847, 1277, 1466, 1568
SchI	GAGTC	2 cut(s)	446, 1838
ScrFI	CCNGG	8 cut(s)	199, 1190, 1272, 1281, 1341, 1371, 1383, 1449
SduI	GDGCHC	5 cut(s)	990, 1102, 1393, 1558, 1684
SexAI	ACCWGGT	1 cut(s)	1381
SfaNI	GCATC	3 cut(s)	769, 1503, 1707
Sfr274I	CTCGAG	1 cut(s)	1826
SinI	GGWCC	4 cut(s)	569, 695, 1277, 1568
SlaI	CTCGAG	1 cut(s)	1826
SmlI	CTYRAG	3 cut(s)	980, 1793, 1826
SmoI	CTYRAG	3 cut(s)	980, 1793, 1826
SphI	GCATGC	2 cut(s)	1627, 1789
SsiI	CCGC	8 cut(s)	38, 44, 47, 239, 580, 1106, 1219, 1908
SspI	AATATT	1 cut(s)	1299
SspMI	CTAG	4 cut(s)	252, 705, 1677, 1925
SstI	GAGCTC	2 cut(s)	990, 1102
StyD4I	CCNGG	8 cut(s)	197, 1188, 1270, 1279, 1339, 1369, 1381, 1447
TaaI	ACNGT	1 cut(s)	1647
TaiI	ACGT	2 cut(s)	99, 1462
TaqI	TCGA	4 cut(s)	108, 653, 886, 1827
TatI	WGTACW	1 cut(s)	309
TauI	GCSGC	4 cut(s)	41, 47, 50, 1222
TfiI	GAWTC	4 cut(s)	125, 640, 650, 1729
Tru1I	TTAA	3 cut(s)	945, 981, 1499
Tru9I	TTAA	3 cut(s)	945, 981, 1499
TscAI	CASTG	2 cut(s)	1650, 1746
TseFI	GTSAC	2 cut(s)	79, 1830
Tsp45I	GTSAC	2 cut(s)	79, 1830
TspDTI	ATGAA	5 cut(s)	405, 513, 888, 917, 1127
TspGWI	ACGGA	3 cut(s)	137, 464, 1056
TspRI	CASTG	2 cut(s)	1650, 1746
Vha464I	CTTAAG	1 cut(s)	980
VpaK11BI	GGWCC	4 cut(s)	569, 695, 1277, 1568
VspI	ATTAAT	1 cut(s)	1499
XapI	RAATTY	6 cut(s)	367, 617, 678, 689, 815, 949
XceI	RCATGY	3 cut(s)	1597, 1627, 1789
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1343
XhoI	CTCGAG	1 cut(s)	1826
XspI	CTAG	4 cut(s)	252, 705, 1677, 1925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.