Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0002657

Physical Location & Seq

Genomic Coordinates Forward (+)

4675216 .. 4680415

Gene Structure 5200 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g05720.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGCGCAAGCTCAGGCTCAGAACGCGAACGCCGCGGCGGCGGCTGCGGCTGCTAACGGCGGCGGTGGGGCGAACCAGTTTGTGACGACGTCGCTTTACGTTGGGGATCTGGACCAGAACATTACGGATTCGCAGCTGTATGACTTGTTCAATCAGCTGGGTCAGGTGGTGTCGGTTAGGGTTTGCAGGGACTTGTCCACCCGGAGGTCGCTTGGTTATGGCTATGTCAATTATGCCAACCCTCAGGACGCTGCTAGGGCATTGGATGTGTTGAACTTCACTCCTATAAATGGAAGGCCCATTAGGATCATGTACTCTCACCGTGATCCTAGTATTCGTAAAAGTGGGGCTGGAAATATATTTATTAAGAATTTGGACAAAGCTCTTGATCATAAAGCCTTGCATGATACATTTTCTTCGTTCGGCAACATTCTTTCTTGCAAGGTGGCGGTGGACTCCTCTGGCCAGTCAAAGGGCTATGGCTTTGTGCAATTTGATAATGAAGAAGCTGCCCAAAAAGCTATTGCTAAGTTGAATGGTATGCTTATAAATGACAAGCAAGTTTTTGTAGGACCATTCCTTCGCAAGCAGGAAAGGGATGGGGTTGCTGACAAGTCCAAATTCCAGAATGTTTATGTTAAGAATATATCAGAATCGACTACTGAGGATGATTTTACCAAAATTTTTGGTGAATTTGGACCAATCACTAGTGTAGTGATCATGAGAGATCAAGAAGGAAAATCCAAGTGCTTTGGATTTGTCAACTTTGATAATCCAGATGATGCTGCCAGAGCTGTTGAGGCTCTGAATGGAAAGAAATTTGAGGATAAGGAGTGGTATGTTGGGAAGGCCCAGAAGAAGTCTGAAAGGGAAAATGAACTGAAACTTCGATTTGAACAGAGCATGAAAGAGGCAGCAGACAAATATCAAGGAGCAAACTTGTATGTTAAAAACTTAGATGATAGCATAGTTGATGACAAACTTAGGGAGCTCTTCACTCCATTTGGCACAATTACCTCGTGTAAGGTCATGCGAGACCCCAGCGGAGTAAGTAGGGGTTCTGGTTTTGTTGCATTCTCAACTCCTGAAGAAGCAAACAGAGCTCTTGCGGAGATGAATGGAAAAATGATTGTAAGCAAACCTCTCTATGTTGCACTTGCGCAACGAAAAGAAGATAGAAGAGCGAGACTCCAGGCTCAGTTTTCTCAAATGCGGCCAGTTGCAATGACACCTTCAGTCGCTCCTCGTATGCCAATGTACCCTCCTGGTGGTCCGGGTATTGGACAGCAAATATTCTATGGTCAGGCCCCACCCGCTATCATTCCCTCCCAGCCTGGATTTGGATATCAACAGCAGCTGGTTCCGGGTATGAGACCTGGTGGTGCTCCCATGCCAAACTTCTTTGTGCCAATGGTTCAGCAGGGGCAACAAGGGCAGCGTCCTGGTGGAAGACGTACAGGCCCTGCGCAGCAAAACCAGCAACCAGTTCCATTAATGCAATCGCCGATGCTTCCAAGAGGGCGTGTCTACCGTTACCCGTCAGCGCGCCCTATGCCTGATGGTCCAATGCCTGGTGTTGGTGGAGGCATGTATTCTGTTCCATATGATCTGTCTGGCATGCCATTGCGTGATCCAGCACTGTCTCAGCCTCTTCCAATTGGGACTTTGGCTAGTGCCCTTGCAAATGCTACACCAGAGCAGCAAAGGACGATGCTCGGGGAGAGTCTTTACCCGCTGGTGGACCAGCTGGAACCTGACAATGCAGCTAAGGTTACTGGCATGCTTCTTGAGATGGATCAGACTGAGGTTCTGCATTTGCTCGAGTCACCTGAAGCTTTGAAAGCAAAGGTAGCTGAAGCTATGGAGGTTCTGAGGAATGTTGCTCAGCAGCAGCAAGCTGGCGGTGCAGCTGATCAACTAGCCTCAATGTCGCTCAATGATAATCTTGTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006412 GO:0006413 GO:0006417 GO:0006446 GO:0006518 GO:0006807 GO:0006950 GO:0006970 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009628 GO:0009651 GO:0009889 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010608 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031329 GO:0032268 GO:0034248 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:1900151 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1903311 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

652

Amino Acids

70.96

Weight (kDa)

8.38

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	17 - 84	4.6e-21	RNA recognition motif
RRM_1	PF00076	108 - 176	9.2e-24	RNA recognition motif
RRM_1	PF00076	211 - 279	4.3e-19	RNA recognition motif
MLLE	PF00658	456 - 521	7.3e-30	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49760 AT1G49760 AT4G34110
fragaria_vesca	FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g34040 FvH4_2g34040 FvH4_2g34040 FvH4_6g37220
malus_domestica	MD00G1138300.v1.1 MD05G1085100.v1.1 MD08G1096400.v1.1 MD15G1079100.v1.1
prunus_persica	Prupe.1G432200_v2.0.a1 Prupe.1G432200_v2.0.a1 Prupe.8G129400_v2.0.a1 Prupe.8G129400_v2.0.a1
pyrus_communis	pycom05g08430 pycom08g07840 pycom10g07970 pycom15g07370
rosa_chinensis	RchiOBHm_Chr6g0256591 RchiOBHm_Chr6g0308331
rosa_laevigata	RLG00000010649 RLG00000014752
rosa_multiflora	Rmu_sc0003012.1_g000007
rosa_roxburghii	Rroxscaffold_7G00160250 Rroxscaffold_7G00209190
rosa_rugosa	Rorug05G0564800 Rorug06G0366200 Rorug06G0366200
rosa_samantha	Rh6AG082800 Rh6AG475400 Rh6BG077400 Rh6CG072000 Rh6DG477300
rosa_wichuraiana	Rw6G007450 Rw6G041440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	548
AatII	GACGTC	1 cut(s)	92
Acc16I	TGCGCA	2 cut(s)	1161, 1467
AccB7I	CCANNNNNTGG	1 cut(s)	1571
AccI	GTMKAC	1 cut(s)	1527
AccII	CGCG	3 cut(s)	26, 35, 1546
AclWI	GGATC	5 cut(s)	114, 314, 320, 1625, 1803
AcoI	YGGCCR	2 cut(s)	463, 1214
AcsI	RAATTY	5 cut(s)	370, 620, 681, 692, 818
AcuI	CTGAAG	4 cut(s)	1107, 1218, 1851, 1875
AcyI	GRCGYC	1 cut(s)	89
AfaI	GTAC	3 cut(s)	314, 1259, 1456
AfiI	CCNNNNNNNGG	9 cut(s)	204, 290, 472, 1268, 1280, 1340, 1571, 1577, 1738
AgsI	TTSAA	5 cut(s)	151, 274, 535, 896, 1840
AhlI	ACTAGT	1 cut(s)	707
AjnI	CCWGG	6 cut(s)	1191, 1264, 1333, 1375, 1441, 1570
Alw21I	GWGCWC	3 cut(s)	993, 1105, 1387
Alw26I	GTCTC	4 cut(s)	1029, 1180, 1366, 1647
AlwI	GGATC	5 cut(s)	114, 314, 320, 1625, 1803
AlwNI	CAGNNNCTG	2 cut(s)	1357, 1463
Ama87I	CYCGRG	2 cut(s)	1715, 1820
AoxI	GGCC	6 cut(s)	296, 463, 849, 1214, 1305, 1459
ApoI	RAATTY	5 cut(s)	370, 620, 681, 692, 818
ArsI	GACNNNNNNTTYG	2 cut(s)	564, 596
AseI	ATTAAT	1 cut(s)	1493
AspLEI	GCGC	5 cut(s)	7, 1162, 1468, 1546, 1548
AsuC2I	CCSGG	3 cut(s)	202, 1275, 1365
AsuHPI	GGTGA	3 cut(s)	311, 701, 1818
AvaI	CYCGRG	2 cut(s)	1715, 1820
AvaII	GGWCC	6 cut(s)	112, 572, 698, 1271, 1562, 1741
AxyI	CCTNAGG	1 cut(s)	243
BaeGI	GKGCMC	1 cut(s)	1678
BalI	TGGCCA	1 cut(s)	465
BanII	GRGCYC	2 cut(s)	993, 1105
BauI	CACGAG	1 cut(s)	1018
BbsI	GAAGAC	1 cut(s)	1456
Bbv12I	GWGCWC	3 cut(s)	993, 1105, 1387
BccI	CCATC	3 cut(s)	593, 1553, 1786
BceAI	ACGGC	1 cut(s)	73
BciT130I	CCWGG	6 cut(s)	1193, 1266, 1335, 1377, 1443, 1572
BclI	TGATCA	3 cut(s)	388, 717, 1912
BcnI	CCSGG	3 cut(s)	202, 1275, 1365
BcoDI	GTCTC	4 cut(s)	1029, 1180, 1366, 1647
BcuI	ACTAGT	1 cut(s)	707
BfaI	CTAG	5 cut(s)	255, 330, 708, 1671, 1919
BglI	GCCNNNNNGGC	1 cut(s)	38
BlpI	GCTNAGC	1 cut(s)	1884
Bme1390I	CCNGG	9 cut(s)	202, 1193, 1266, 1275, 1335, 1365, 1377, 1443, 1572
Bme18I	GGWCC	6 cut(s)	112, 572, 698, 1271, 1562, 1741
BmeT110I	CYCGRG	2 cut(s)	1715, 1820
BmiI	GGNNCC	3 cut(s)	1308, 1362, 1752
BmrFI	CCNGG	9 cut(s)	202, 1193, 1266, 1275, 1335, 1365, 1377, 1443, 1572
BmsI	GCATC	3 cut(s)	772, 1497, 1701
BpiI	GAAGAC	1 cut(s)	1456
BplI	GAGNNNNNCTC	2 cut(s)	1173, 1205
BpmI	CTGGAG	1 cut(s)	1175
Bpu10I	CCTNAGC	2 cut(s)	12, 1767
Bpu1102I	GCTNAGC	1 cut(s)	1884
BpuEI	CTTGAG	1 cut(s)	1808
BpuMI	CCSGG	3 cut(s)	202, 1275, 1365
BsaHI	GRCGYC	1 cut(s)	89
BsaI	GGTCTC	2 cut(s)	1029, 1366
BsaJI	CCNNGG	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	9 cut(s)	204, 290, 472, 1268, 1280, 1340, 1571, 1577, 1738
Bse1I	ACTGG	5 cut(s)	76, 466, 1217, 1484, 1780
Bse21I	CCTNAGG	1 cut(s)	243
Bse3DI	GCAATG	2 cut(s)	1230, 1622
BseBI	CCWGG	6 cut(s)	1193, 1266, 1335, 1377, 1443, 1572
BseDI	CCNNGG	1 cut(s)	33
BseGI	GGATG	3 cut(s)	271, 604, 673
BseLI	CCNNNNNNNGG	9 cut(s)	204, 290, 472, 1268, 1280, 1340, 1571, 1577, 1738
BseMI	GCAATG	2 cut(s)	1230, 1622
BseMII	CTCAG	9 cut(s)	26, 32, 257, 654, 1211, 1658, 1794, 1862, 1898
BseNI	ACTGG	5 cut(s)	76, 466, 1217, 1484, 1780
BsePI	GCGCGC	1 cut(s)	1544
BseRI	GAGGAG	2 cut(s)	448, 1233
BseSI	GKGCMC	1 cut(s)	1678
BseYI	CCCAGC	3 cut(s)	157, 1040, 1329
BsgI	GTGCAG	1 cut(s)	1926
Bsh1236I	CGCG	3 cut(s)	26, 35, 1546
BshFI	GGCC	6 cut(s)	298, 465, 851, 1216, 1307, 1461
BsiHKAI	GWGCWC	3 cut(s)	993, 1105, 1387
BsiHKCI	CYCGRG	2 cut(s)	1715, 1820
BsiSI	CCGG	3 cut(s)	202, 1274, 1364
BslFI	GGGAC	2 cut(s)	203, 1675
BslI	CCNNNNNNNGG	9 cut(s)	204, 290, 472, 1268, 1280, 1340, 1571, 1577, 1738
BsmAI	GTCTC	4 cut(s)	1029, 1180, 1366, 1647
BsmFI	GGGAC	2 cut(s)	203, 1675
BsmI	GAATGC	1 cut(s)	1073
BsnI	GGCC	6 cut(s)	298, 465, 851, 1216, 1307, 1461
Bso31I	GGTCTC	2 cut(s)	1029, 1366
BsoBI	CYCGRG	2 cut(s)	1715, 1820
Bsp1286I	GDGCHC	4 cut(s)	993, 1105, 1387, 1678
Bsp1720I	GCTNAGC	1 cut(s)	1884
BspANI	GGCC	6 cut(s)	298, 465, 851, 1216, 1307, 1461
BspCNI	CTCAG	9 cut(s)	25, 31, 256, 655, 1210, 1657, 1795, 1863, 1897
BspFNI	CGCG	3 cut(s)	26, 35, 1546
BspHI	TCATGA	1 cut(s)	720
BspLI	GGNNCC	3 cut(s)	1308, 1362, 1752
BspPI	GGATC	5 cut(s)	114, 314, 320, 1625, 1803
BspQI	GCTCTTC	2 cut(s)	998, 1174
BspTNI	GGTCTC	2 cut(s)	1029, 1366
BsrDI	GCAATG	2 cut(s)	1230, 1622
BsrI	ACTGG	5 cut(s)	76, 466, 1217, 1484, 1780
BssECI	CCNNGG	1 cut(s)	33
BssHII	GCGCGC	1 cut(s)	1544
BssNI	GRCGYC	1 cut(s)	89
BssSI	CACGAG	1 cut(s)	1018
Bst2BI	CACGAG	1 cut(s)	1018
Bst2UI	CCWGG	6 cut(s)	1193, 1266, 1335, 1377, 1443, 1572
Bst4CI	ACNGT	3 cut(s)	323, 1532, 1641
Bst6I	CTCTTC	3 cut(s)	998, 1174, 1656
BstACI	GRCGYC	1 cut(s)	89
BstC8I	GCNNGC	7 cut(s)	9, 587, 1546, 1619, 1781, 1896, 1900
BstDSI	CCRYGG	1 cut(s)	33
BstF5I	GGATG	3 cut(s)	271, 604, 673
BstFNI	CGCG	3 cut(s)	26, 35, 1546
BstHHI	GCGC	5 cut(s)	7, 1162, 1468, 1546, 1548
BstMAI	GTCTC	4 cut(s)	1029, 1180, 1366, 1647
BstNI	CCWGG	6 cut(s)	1193, 1266, 1335, 1377, 1443, 1572
BstNSI	RCATGY	3 cut(s)	1591, 1621, 1783
BstSCI	CCNGG	9 cut(s)	200, 1191, 1264, 1273, 1333, 1363, 1375, 1441, 1570
BstSLI	GKGCMC	1 cut(s)	1678
BstUI	CGCG	3 cut(s)	26, 35, 1546
BstV2I	GAAGAC	1 cut(s)	1456
BstX2I	RGATCY	1 cut(s)	106
BstYI	RGATCY	1 cut(s)	106
Bsu36I	CCTNAGG	1 cut(s)	243
BsuRI	GGCC	6 cut(s)	298, 465, 851, 1216, 1307, 1461
BtgI	CCRYGG	1 cut(s)	33
BtsCI	GGATG	3 cut(s)	271, 604, 673
BtsIMutI	CAGTG	1 cut(s)	1637
Cac8I	GCNNGC	7 cut(s)	9, 587, 1546, 1619, 1781, 1896, 1900
CaiI	CAGNNNCTG	2 cut(s)	1357, 1463
CciI	TCATGA	1 cut(s)	720
CfoI	GCGC	5 cut(s)	7, 1162, 1468, 1546, 1548
Cfr42I	CCGCGG	1 cut(s)	36
CseI	GACGC	2 cut(s)	257, 1427
CsiI	ACCWGGT	1 cut(s)	1375
Csp6I	GTAC	3 cut(s)	313, 1258, 1455
CviAII	CATG	9 cut(s)	310, 404, 721, 904, 1030, 1390, 1588, 1618, 1780
CviQI	GTAC	3 cut(s)	313, 1258, 1455
EaeI	YGGCCR	2 cut(s)	463, 1214
Eam1104I	CTCTTC	3 cut(s)	998, 1174, 1656
EarI	CTCTTC	3 cut(s)	998, 1174, 1656
Ecl136II	GAGCTC	2 cut(s)	991, 1103
Eco24I	GRGCYC	2 cut(s)	993, 1105
Eco31I	GGTCTC	2 cut(s)	1029, 1366
Eco32I	GATATC	1 cut(s)	1346
Eco47I	GGWCC	6 cut(s)	112, 572, 698, 1271, 1562, 1741
Eco53kI	GAGCTC	2 cut(s)	991, 1103
Eco57I	CTGAAG	4 cut(s)	1107, 1218, 1851, 1875
Eco81I	CCTNAGG	1 cut(s)	243
Eco88I	CYCGRG	2 cut(s)	1715, 1820
EcoICRI	GAGCTC	2 cut(s)	991, 1103
EcoO109I	RGGNCCY	2 cut(s)	1306, 1460
EcoRII	CCWGG	6 cut(s)	1191, 1264, 1333, 1375, 1441, 1570
EcoRV	GATATC	1 cut(s)	1346
EcoT38I	GRGCYC	2 cut(s)	993, 1105
FaeI	CATG	9 cut(s)	313, 407, 724, 907, 1033, 1393, 1591, 1621, 1783
FaqI	GGGAC	2 cut(s)	203, 1675
FatI	CATG	9 cut(s)	309, 403, 720, 903, 1029, 1389, 1587, 1617, 1779
FauI	CCCGC	2 cut(s)	1321, 1740
FauNDI	CATATG	1 cut(s)	1603
FbaI	TGATCA	3 cut(s)	388, 717, 1912
FblI	GTMKAC	1 cut(s)	1527
FokI	GGATG	3 cut(s)	278, 611, 680
FriOI	GRGCYC	2 cut(s)	993, 1105
FspBI	CTAG	5 cut(s)	255, 330, 708, 1671, 1919
FspI	TGCGCA	2 cut(s)	1161, 1467
GlaI	GCGC	5 cut(s)	6, 1161, 1467, 1545, 1547
GsaI	CCCAGC	3 cut(s)	161, 1044, 1333
GsuI	CTGGAG	1 cut(s)	1175
HaeIII	GGCC	6 cut(s)	298, 465, 851, 1216, 1307, 1461
HapII	CCGG	3 cut(s)	202, 1274, 1364
HgaI	GACGC	2 cut(s)	257, 1427
HhaI	GCGC	5 cut(s)	7, 1162, 1468, 1546, 1548
Hin1I	GRCGYC	1 cut(s)	89
Hin1II	CATG	9 cut(s)	313, 407, 724, 907, 1033, 1393, 1591, 1621, 1783
Hin6I	GCGC	5 cut(s)	5, 1160, 1466, 1544, 1546
HinP1I	GCGC	5 cut(s)	5, 1160, 1466, 1544, 1546
HincII	GTYRAC	1 cut(s)	763
HindII	GTYRAC	1 cut(s)	763
HindIII	AAGCTT	1 cut(s)	1833
HinfI	GANTC	6 cut(s)	128, 455, 653, 1188, 1723, 1823
HpaII	CCGG	3 cut(s)	202, 1274, 1364
HphI	GGTGA	3 cut(s)	311, 701, 1818
Hpy166II	GTNNAC	5 cut(s)	198, 454, 763, 1528, 1741
Hpy188I	TCNGA	6 cut(s)	21, 652, 807, 865, 1800, 1872
Hpy8I	GTNNAC	5 cut(s)	198, 454, 763, 1528, 1741
Hpy99I	CGWCG	2 cut(s)	91, 94
HpyAV	CCTTC	5 cut(s)	288, 590, 728, 841, 1242
HpyCH4III	ACNGT	3 cut(s)	323, 1532, 1641
HpyCH4IV	ACGT	3 cut(s)	89, 99, 1453
HpySE526I	ACGT	3 cut(s)	89, 99, 1453
Hsp92I	GRCGYC	1 cut(s)	89
Hsp92II	CATG	9 cut(s)	313, 407, 724, 907, 1033, 1393, 1591, 1621, 1783
HspAI	GCGC	5 cut(s)	5, 1160, 1466, 1544, 1546
Ksp22I	TGATCA	3 cut(s)	388, 717, 1912
KspI	CCGCGG	1 cut(s)	36
LguI	GCTCTTC	2 cut(s)	998, 1174
LmnI	GCTCC	4 cut(s)	932, 988, 1246, 1390
LweI	GCATC	3 cut(s)	772, 1497, 1701
MabI	ACCWGGT	1 cut(s)	1375
MaeI	CTAG	5 cut(s)	255, 330, 708, 1671, 1919
MaeII	ACGT	3 cut(s)	89, 99, 1453
MaeIII	GTNAC	4 cut(s)	82, 1532, 1771, 1824
MboII	GAAGA	9 cut(s)	408, 515, 868, 985, 1100, 1184, 1191, 1461, 1643
MfeI	CAATTG	1 cut(s)	1656
MflI	RGATCY	1 cut(s)	106
MhlI	GDGCHC	4 cut(s)	993, 1105, 1387, 1678
MlsI	TGGCCA	1 cut(s)	465
MluCI	AATT	9 cut(s)	229, 370, 491, 620, 681, 692, 818, 1011, 1656
MluNI	TGGCCA	1 cut(s)	465
MlyI	GAGTC	4 cut(s)	449, 1182, 1732, 1832
Mox20I	TGGCCA	1 cut(s)	465
MscI	TGGCCA	1 cut(s)	465
MseI	TTAA	4 cut(s)	366, 639, 948, 1493
Msp20I	TGGCCA	1 cut(s)	465
MspA1I	CMGCKG	8 cut(s)	35, 136, 157, 1044, 1357, 1735, 1747, 1910
MspI	CCGG	3 cut(s)	202, 1274, 1364
MspR9I	CCNGG	9 cut(s)	202, 1193, 1266, 1275, 1335, 1365, 1377, 1443, 1572
MunI	CAATTG	1 cut(s)	1656
Mva1269I	GAATGC	1 cut(s)	1073
MvaI	CCWGG	6 cut(s)	1193, 1266, 1335, 1377, 1443, 1572
MvnI	CGCG	3 cut(s)	26, 35, 1546
NciI	CCSGG	3 cut(s)	202, 1275, 1365
NdeI	CATATG	1 cut(s)	1603
NlaIII	CATG	9 cut(s)	313, 407, 724, 907, 1033, 1393, 1591, 1621, 1783
NlaIV	GGNNCC	3 cut(s)	1308, 1362, 1752
NmuCI	GTSAC	2 cut(s)	82, 1824
NsbI	TGCGCA	2 cut(s)	1161, 1467
NspI	RCATGY	3 cut(s)	1591, 1621, 1783
PaeI	GCATGC	2 cut(s)	1621, 1783
PaeR7I	CTCGAG	1 cut(s)	1820
PagI	TCATGA	1 cut(s)	720
PauI	GCGCGC	1 cut(s)	1544
PciSI	GCTCTTC	2 cut(s)	998, 1174
PctI	GAATGC	1 cut(s)	1073
PfeI	GAWTC	2 cut(s)	128, 653
PflFI	GACNNNGTC	1 cut(s)	88
PflMI	CCANNNNNTGG	1 cut(s)	1571
PleI	GAGTC	4 cut(s)	449, 1182, 1731, 1831
PpsI	GAGTC	4 cut(s)	449, 1182, 1731, 1831
PshBI	ATTAAT	1 cut(s)	1493
PsiI	TTATAA	1 cut(s)	548
Psp124BI	GAGCTC	2 cut(s)	993, 1105
Psp6I	CCWGG	6 cut(s)	1191, 1264, 1333, 1375, 1441, 1570
PspFI	CCCAGC	3 cut(s)	157, 1040, 1329
PspGI	CCWGG	6 cut(s)	1191, 1264, 1333, 1375, 1441, 1570
PspN4I	GGNNCC	3 cut(s)	1308, 1362, 1752
PspXI	VCTCGAGB	1 cut(s)	1820
PsrI	GAACNNNNNNTAC	2 cut(s)	131, 163
PstNI	CAGNNNCTG	2 cut(s)	1357, 1463
PsuI	RGATCY	1 cut(s)	106
PsyI	GACNNNGTC	1 cut(s)	88
PteI	GCGCGC	1 cut(s)	1544
PvuII	CAGCTG	5 cut(s)	136, 157, 1357, 1747, 1910
RsaI	GTAC	3 cut(s)	314, 1259, 1456
RsaNI	GTAC	3 cut(s)	313, 1258, 1455
SacI	GAGCTC	2 cut(s)	993, 1105
SacII	CCGCGG	1 cut(s)	36
SapI	GCTCTTC	2 cut(s)	998, 1174
SaqAI	TTAA	4 cut(s)	366, 639, 948, 1493
SchI	GAGTC	4 cut(s)	449, 1182, 1732, 1832
ScrFI	CCNGG	9 cut(s)	202, 1193, 1266, 1275, 1335, 1365, 1377, 1443, 1572
SduI	GDGCHC	4 cut(s)	993, 1105, 1387, 1678
SexAI	ACCWGGT	1 cut(s)	1375
SfaNI	GCATC	3 cut(s)	772, 1497, 1701
Sfr274I	CTCGAG	1 cut(s)	1820
Sfr303I	CCGCGG	1 cut(s)	36
SgrBI	CCGCGG	1 cut(s)	36
SinI	GGWCC	6 cut(s)	112, 572, 698, 1271, 1562, 1741
SlaI	CTCGAG	1 cut(s)	1820
SmlI	CTYRAG	2 cut(s)	1787, 1820
SmoI	CTYRAG	2 cut(s)	1787, 1820
SpeI	ACTAGT	1 cut(s)	707
SphI	GCATGC	2 cut(s)	1621, 1783
Sse9I	AATT	9 cut(s)	229, 370, 491, 620, 681, 692, 818, 1011, 1656
SspI	AATATT	1 cut(s)	1293
SspMI	CTAG	5 cut(s)	255, 330, 708, 1671, 1919
SstI	GAGCTC	2 cut(s)	993, 1105
StyD4I	CCNGG	9 cut(s)	200, 1191, 1264, 1273, 1333, 1363, 1375, 1441, 1570
TaaI	ACNGT	3 cut(s)	323, 1532, 1641
TaiI	ACGT	3 cut(s)	92, 102, 1456
TaqI	TCGA	3 cut(s)	656, 889, 1821
TasI	AATT	9 cut(s)	229, 370, 491, 620, 681, 692, 818, 1011, 1656
TatI	WGTACW	1 cut(s)	312
TauI	GCSGC	7 cut(s)	35, 38, 41, 44, 50, 63, 1216
TfiI	GAWTC	2 cut(s)	128, 653
Tru1I	TTAA	4 cut(s)	366, 639, 948, 1493
Tru9I	TTAA	4 cut(s)	366, 639, 948, 1493
TscAI	CASTG	1 cut(s)	1644
TseFI	GTSAC	2 cut(s)	82, 1824
Tsp45I	GTSAC	2 cut(s)	82, 1824
TspDTI	ATGAA	4 cut(s)	516, 891, 920, 1130
TspGWI	ACGGA	1 cut(s)	140
TspRI	CASTG	1 cut(s)	1644
Tth111I	GACNNNGTC	1 cut(s)	88
Van91I	CCANNNNNTGG	1 cut(s)	1571
VpaK11BI	GGWCC	6 cut(s)	112, 572, 698, 1271, 1562, 1741
VspI	ATTAAT	1 cut(s)	1493
XapI	RAATTY	5 cut(s)	370, 620, 681, 692, 818
XceI	RCATGY	3 cut(s)	1591, 1621, 1783
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1337
XhoI	CTCGAG	1 cut(s)	1820
XmiI	GTMKAC	1 cut(s)	1527
XspI	CTAG	5 cut(s)	255, 330, 708, 1671, 1919
ZraI	GACGTC	1 cut(s)	90

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.