Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0002657

Physical Location & Seq

Genomic Coordinates Forward (+)

25386135 .. 25389850

Gene Structure 3716 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g34040.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGGCTCAGATTCAAGTTCAGCATCAGGCTCCGGTGACCGGTCCTAACGGCGGCGGCGGTGGTGCGCAGCAACAGATGGTGTCGACGTCGCTGTACGTCGGGGATCTGGACCTGAATGTGACCGACTCGCAGCTCTACGATCTGTTCAATCAGATCGGCCAGGTTGTGTCTGTTAGGGTTTGCAGGGACTTGTCCACTCGCAGATCTCTCGGTTATGGCTATGTTAATTATAGCAACCCTCAGGATGCTGCGAGGGCACTAGAAGTATTGAACTTCACTCCACTGAATAACAAATCGATCAGAATTTGCTATTCTCTTCGGGACCCTACTATTAGAAAGAGTGGTACCGGGAATATTTTTATCAAGAATCTGGACAAGGAAATTGACCACAAGGCATTGCATGATACATTCTCTTCTTTCGGCAACATACTTTCTTGCAAGATAGCTACGGATGCATCTGGGCAGTCCAAGGGCTATGGTTTTGTTCAATTTGACAAGGAAGAAGCTGCTGAGAGTGCCATTGAGAAGTTAAATGGAATGCTCTTGAATGATAAACAAGTCTATGTAGGTCCCTTTCTCCGCAAGCAGGAGAGGGATGGTGCTTTGCATAAGACAAAATTTAGCAATGTGTATGTGAAAAATATATCCGAGGGTACTACAGATGATGACCTGAAGAAAATATTTGGTGAACATGGGCCCATTACTAGTGCTGTAGTGATGAGGGATGGTGAAGGTAAATCAAGGGGTTTTGGTTTTGTCAACTTTGATAACCCTGATGATGCTGCTAAGGCTGTTGAGCTTCTGAATGGAAAGCAATTTGATGATAAGGAGTGGTATGTTGGCAAAGCCCAGAAGAAGACTGAAAGAGAAGTTGAGCTGAAGGAGAAATTTGAGCACAGTATGAAGGAAGCTAGTGATAAGTTTCAAGGTGTGAATTTGTATATCAAGAACTTGGATGATAGCATTGATGATGAGAAACTTAAGGAATTATTCTCCGAGTATGGTACAGTCACATCTTGCAAGGTTATGCGTGACCCTGAAGGAGTCAGTCGTGGTTCTGGTTTTGTTGCCTTTTCGACTTCTGAAGAAGCTTCTCGAGCTCTTACGGAGATGAATGGCAAAATGGTTGTTAGCAAGCCTCTTTATGTTGCACTTGCACAACGAAAGGAAGAGAGACGGGCAAGGTTGCAGGCTCAGTTTTCACAAATGAGGCCTGTTGCTATGGCTCCTGCAGTGGCTCCTCTTCGACCAATGTACCCTCCTGGTGCTCCAGGTCTAGGGCAACAATTTTTGTATGGGCAAGGACCTCCAACTATAATTCCACAACAAGCTGGATTCGGTTACCAACAGCAACTTGTGCCAGGATTAAGGCCTGGAGGTGCTCCAATGCCAAACTTCTTTGTTCCAATGGTCCAACAGGGTCAGCAAGGCCAACGCCCAGGAGGTCGACGTGGGGCAGGTCTTGTGCAACAAAACCCGCAACAAGTGCCAATGATGCCGCAGCATATGATTCCAAGAGGGCGCATGTATCGTTATCCACCTGGTCGCATTGTTCAGGAAGCTCCATATTCTGGTGGTATGCTCTCAGCAGGACGTGGTATGCCAGTTCCAGCTTTGGCTTCATCCCTTGCCAATGCTTCACCTGAAGAACAAAGGACGATGCTTGGTGAAGCTTTATATCCTCAAGTTAATGCTTTGGAGCCCGAATCAGCAGCCAAGGTTACTGGTATGCTTCTAGAGATGGACCAGACTGAGGTTTTGCATTTGCTCGAGTCACCGGAGGCTCTAAAGGCCAAAGTTGCAGAGGCCATAGAGGTCCTGAGGAATGTAACCCAACATCAGGTTAACAACAGTGGTGATCAGTTGGCATCAATATCTCTGTCTGACGAGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006412 GO:0006413 GO:0006417 GO:0006446 GO:0006518 GO:0006807 GO:0006950 GO:0006970 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009628 GO:0009651 GO:0009889 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010608 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031329 GO:0032268 GO:0034248 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:1900151 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1903311 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

632

Amino Acids

69.25

Weight (kDa)

6.56

Isoelectric Point (pI)

39.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	31 - 101	3.4e-19	RNA recognition motif
RRM_1	PF00076	119 - 187	1.1e-21	RNA recognition motif
RRM_1	PF00076	210 - 278	1.5e-23	RNA recognition motif
RRM_1	PF00076	313 - 381	7.8e-20	RNA recognition motif
MLLE	PF00658	543 - 607	2.7e-29	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49760 AT1G49760 AT4G34110
fragaria_vesca	FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g05720 FvH4_2g34040 FvH4_2g34040 FvH4_2g34040 FvH4_6g37220
malus_domestica	MD00G1138300.v1.1 MD05G1085100.v1.1 MD08G1096400.v1.1 MD15G1079100.v1.1
prunus_persica	Prupe.1G432200_v2.0.a1 Prupe.1G432200_v2.0.a1 Prupe.8G129400_v2.0.a1 Prupe.8G129400_v2.0.a1
pyrus_communis	pycom05g08430 pycom08g07840 pycom10g07970 pycom15g07370
rosa_chinensis	RchiOBHm_Chr6g0256591 RchiOBHm_Chr6g0308331
rosa_laevigata	RLG00000010649 RLG00000014752
rosa_multiflora	Rmu_sc0003012.1_g000007
rosa_roxburghii	Rroxscaffold_7G00160250 Rroxscaffold_7G00209190
rosa_rugosa	Rorug05G0564800 Rorug06G0366200 Rorug06G0366200
rosa_samantha	Rh6AG082800 Rh6AG475400 Rh6BG077400 Rh6CG072000 Rh6DG477300
rosa_wichuraiana	Rw6G007450 Rw6G041440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	89
Acc16I	TGCGCA	1 cut(s)	66
Acc36I	ACCTGC	1 cut(s)	1448
Acc65I	GGTACC	1 cut(s)	344
AccB1I	GGYRCC	1 cut(s)	344
AccB7I	CCANNNNNTGG	1 cut(s)	1571
AccI	GTMKAC	2 cut(s)	83, 1447
AciI	CCGC	6 cut(s)	51, 54, 57, 580, 1478, 1499
AclWI	GGATC	1 cut(s)	111
AcoI	YGGCCR	1 cut(s)	157
AcsI	RAATTY	4 cut(s)	303, 617, 887, 934
AcuI	CTGAAG	5 cut(s)	692, 899, 1059, 1104, 1665
AcyI	GRCGYC	1 cut(s)	86
AfaI	GTAC	5 cut(s)	95, 346, 655, 1006, 1256
AfiI	CCNNNNNNNGG	7 cut(s)	38, 50, 586, 1277, 1571, 1753, 1840
AflII	CTTAAG	1 cut(s)	980
AgeI	ACCGGT	1 cut(s)	38
AgsI	TTSAA	6 cut(s)	14, 148, 271, 488, 547, 926
AhlI	ACTAGT	1 cut(s)	704
AjiI	CACGTC	2 cut(s)	1451, 1595
AjnI	CCWGG	7 cut(s)	159, 1261, 1270, 1360, 1372, 1438, 1540
Alw21I	GWGCWC	4 cut(s)	897, 1102, 1270, 1384
Alw26I	GTCTC	1 cut(s)	1168
AlwI	GGATC	1 cut(s)	111
Ama87I	CYCGRG	2 cut(s)	1095, 1769
AoxI	GGCC	7 cut(s)	157, 695, 1211, 1370, 1429, 1791, 1806
ApaI	GGGCCC	1 cut(s)	699
ApeKI	GCWGC	7 cut(s)	67, 130, 248, 506, 782, 1501, 1712
ApoI	RAATTY	4 cut(s)	303, 617, 887, 934
ArsI	GACNNNNNNTTYG	2 cut(s)	1741, 1773
AsiGI	ACCGGT	1 cut(s)	38
Asp718I	GGTACC	1 cut(s)	344
AspLEI	GCGC	2 cut(s)	67, 1524
AsuC2I	CCSGG	1 cut(s)	349
AsuHPI	GGTGA	7 cut(s)	46, 698, 740, 1632, 1679, 1767, 1868
AvaI	CYCGRG	2 cut(s)	1095, 1769
AvaII	GGWCC	8 cut(s)	41, 109, 322, 569, 1304, 1411, 1744, 1816
AxyI	CCTNAGG	2 cut(s)	240, 1820
BaeGI	GKGCMC	2 cut(s)	259, 699
BaeI	ACNNNNGTAYC	2 cut(s)	1238, 1271
BanI	GGYRCC	1 cut(s)	344
BanII	GRGCYC	3 cut(s)	699, 1102, 1704
BbsI	GAAGAC	1 cut(s)	863
Bbv12I	GWGCWC	4 cut(s)	897, 1102, 1270, 1384
BbvI	GCAGC	7 cut(s)	79, 142, 235, 493, 769, 1513, 1724
BccI	CCATC	4 cut(s)	70, 590, 719, 1735
BceAI	ACGGC	1 cut(s)	64
BcgI	CGANNNNNNTGC	2 cut(s)	190, 224
BciT130I	CCWGG	7 cut(s)	161, 1263, 1272, 1362, 1374, 1440, 1542
BclI	TGATCA	1 cut(s)	1858
BcnI	CCSGG	1 cut(s)	349
BcoDI	GTCTC	1 cut(s)	1168
BcuI	ACTAGT	1 cut(s)	704
BfaI	CTAG	5 cut(s)	260, 705, 912, 1277, 1736
BfmI	CTRYAG	3 cut(s)	657, 711, 1230
BfrI	CTTAAG	1 cut(s)	980
BfuAI	ACCTGC	1 cut(s)	1448
BglII	AGATCT	1 cut(s)	203
Bme1390I	CCNGG	8 cut(s)	161, 349, 1263, 1272, 1362, 1374, 1440, 1542
Bme18I	GGWCC	8 cut(s)	41, 109, 322, 569, 1304, 1411, 1744, 1816
BmeT110I	CYCGRG	2 cut(s)	1095, 1769
BmgBI	CACGTC	2 cut(s)	1451, 1595
BmiI	GGNNCC	9 cut(s)	30, 323, 324, 346, 571, 697, 1227, 1239, 1701
BmrFI	CCNGG	8 cut(s)	161, 349, 1263, 1272, 1362, 1374, 1440, 1542
BmsI	GCATC	8 cut(s)	31, 235, 442, 464, 769, 1485, 1650, 1877
BpiI	GAAGAC	1 cut(s)	863
BpmI	CTGGAG	2 cut(s)	1254, 1395
Bpu10I	CCTNAGC	1 cut(s)	786
BpuEI	CTTGAG	1 cut(s)	1668
BpuMI	CCSGG	1 cut(s)	349
Bsa29I	ATCGAT	1 cut(s)	296
BsaHI	GRCGYC	1 cut(s)	86
BsaJI	CCNNGG	4 cut(s)	468, 648, 1438, 1716
BsaWI	WCCGGW	3 cut(s)	31, 38, 1777
Bsc4I	CCNNNNNNNGG	7 cut(s)	38, 50, 586, 1277, 1571, 1753, 1840
Bse118I	RCCGGY	1 cut(s)	38
Bse1I	ACTGG	2 cut(s)	1604, 1729
Bse21I	CCTNAGG	2 cut(s)	240, 1820
Bse3DI	GCAATG	2 cut(s)	395, 631
BseBI	CCWGG	7 cut(s)	161, 1263, 1272, 1362, 1374, 1440, 1542
BseCI	ATCGAT	1 cut(s)	296
BseDI	CCNNGG	4 cut(s)	468, 648, 1438, 1716
BseGI	GGATG	6 cut(s)	250, 457, 601, 730, 961, 1622
BseLI	CCNNNNNNNGG	7 cut(s)	38, 50, 586, 1277, 1571, 1753, 1840
BseMI	GCAATG	2 cut(s)	395, 631
BseMII	CTCAG	7 cut(s)	20, 254, 501, 1208, 1599, 1743, 1811
BseNI	ACTGG	2 cut(s)	1604, 1729
BseRI	GAGGAG	1 cut(s)	1230
BseSI	GKGCMC	2 cut(s)	259, 699
BseXI	GCAGC	7 cut(s)	79, 142, 235, 493, 769, 1513, 1724
BshFI	GGCC	7 cut(s)	159, 697, 1213, 1372, 1431, 1793, 1808
BshNI	GGYRCC	1 cut(s)	344
BshTI	ACCGGT	1 cut(s)	38
BshVI	ATCGAT	1 cut(s)	296
BsiHKAI	GWGCWC	4 cut(s)	897, 1102, 1270, 1384
BsiHKCI	CYCGRG	2 cut(s)	1095, 1769
BsiSI	CCGG	4 cut(s)	32, 39, 348, 1778
BslFI	GGGAC	3 cut(s)	200, 335, 555
BslI	CCNNNNNNNGG	7 cut(s)	38, 50, 586, 1277, 1571, 1753, 1840
BsmAI	GTCTC	1 cut(s)	1168
BsmBI	CGTCTC	1 cut(s)	1168
BsmFI	GGGAC	3 cut(s)	200, 335, 555
BsmI	GAATGC	1 cut(s)	543
BsnI	GGCC	7 cut(s)	159, 697, 1213, 1372, 1431, 1793, 1808
BsoBI	CYCGRG	2 cut(s)	1095, 1769
Bsp120I	GGGCCC	1 cut(s)	695
Bsp1286I	GDGCHC	7 cut(s)	259, 699, 897, 1102, 1270, 1384, 1704
Bsp143I	GATC	6 cut(s)	103, 139, 153, 203, 297, 1858
BspACI	CCGC	6 cut(s)	51, 54, 57, 580, 1478, 1499
BspANI	GGCC	7 cut(s)	159, 697, 1213, 1372, 1431, 1793, 1808
BspCNI	CTCAG	7 cut(s)	19, 253, 502, 1207, 1598, 1744, 1812
BspDI	ATCGAT	1 cut(s)	296
BspLI	GGNNCC	9 cut(s)	30, 323, 324, 346, 571, 697, 1227, 1239, 1701
BspMAI	CTGCAG	1 cut(s)	1234
BspMI	ACCTGC	1 cut(s)	1448
BspPI	GGATC	1 cut(s)	111
BspT107I	GGYRCC	1 cut(s)	344
BspTI	CTTAAG	1 cut(s)	980
BsrDI	GCAATG	2 cut(s)	395, 631
BsrFI	RCCGGY	1 cut(s)	38
BsrI	ACTGG	2 cut(s)	1604, 1729
BssAI	RCCGGY	1 cut(s)	38
BssECI	CCNNGG	4 cut(s)	468, 648, 1438, 1716
BssMI	GATC	6 cut(s)	103, 139, 153, 203, 297, 1858
BssNI	GRCGYC	1 cut(s)	86
BssT1I	CCWWGG	2 cut(s)	468, 1716
Bst2UI	CCWGG	7 cut(s)	161, 1263, 1272, 1362, 1374, 1440, 1542
Bst4CI	ACNGT	3 cut(s)	899, 1009, 1853
Bst6I	CTCTTC	4 cut(s)	321, 418, 1164, 1248
BstACI	GRCGYC	1 cut(s)	86
BstAFI	CTTAAG	1 cut(s)	980
BstAPI	GCANNNNNTGC	2 cut(s)	1357, 1486
BstC8I	GCNNGC	3 cut(s)	584, 1136, 1191
BstDEI	CTNAG	8 cut(s)	6, 240, 510, 786, 1194, 1585, 1752, 1820
BstEII	GGTNACC	2 cut(s)	34, 1340
BstF5I	GGATG	6 cut(s)	250, 457, 601, 730, 961, 1622
BstHHI	GCGC	2 cut(s)	67, 1524
BstKTI	GATC	6 cut(s)	106, 142, 156, 206, 300, 1861
BstMAI	GTCTC	1 cut(s)	1168
BstMBI	GATC	6 cut(s)	103, 139, 153, 203, 297, 1858
BstNI	CCWGG	7 cut(s)	161, 1263, 1272, 1362, 1374, 1440, 1542
BstNSI	RCATGY	1 cut(s)	1528
BstPI	GGTNACC	2 cut(s)	34, 1340
BstSCI	CCNGG	8 cut(s)	159, 347, 1261, 1270, 1360, 1372, 1438, 1540
BstSFI	CTRYAG	3 cut(s)	657, 711, 1230
BstSLI	GKGCMC	2 cut(s)	259, 699
BstV1I	GCAGC	7 cut(s)	79, 142, 235, 493, 769, 1513, 1724
BstV2I	GAAGAC	1 cut(s)	863
BstX2I	RGATCY	2 cut(s)	103, 203
BstYI	RGATCY	2 cut(s)	103, 203
Bsu15I	ATCGAT	1 cut(s)	296
Bsu36I	CCTNAGG	2 cut(s)	240, 1820
BsuRI	GGCC	7 cut(s)	159, 697, 1213, 1372, 1431, 1793, 1808
BsuTUI	ATCGAT	1 cut(s)	296
BtrI	CACGTC	2 cut(s)	1451, 1595
BtsCI	GGATG	6 cut(s)	250, 457, 601, 730, 961, 1622
BtsI	GCAGTG	1 cut(s)	1239
BtsIMutI	CAGTG	3 cut(s)	281, 1239, 1858
BveI	ACCTGC	1 cut(s)	1448
Cac8I	GCNNGC	3 cut(s)	584, 1136, 1191
CfoI	GCGC	2 cut(s)	67, 1524
Cfr10I	RCCGGY	1 cut(s)	38
ClaI	ATCGAT	1 cut(s)	296
CsiI	ACCWGGT	1 cut(s)	1540
Csp6I	GTAC	5 cut(s)	94, 345, 654, 1005, 1255
CspAI	ACCGGT	1 cut(s)	38
CviAII	CATG	3 cut(s)	401, 692, 1525
CviQI	GTAC	5 cut(s)	94, 345, 654, 1005, 1255
DdeI	CTNAG	8 cut(s)	6, 240, 510, 786, 1194, 1585, 1752, 1820
DpnI	GATC	6 cut(s)	105, 141, 155, 205, 299, 1860
DpnII	GATC	6 cut(s)	103, 139, 153, 203, 297, 1858
EaeI	YGGCCR	1 cut(s)	157
Eam1104I	CTCTTC	4 cut(s)	321, 418, 1164, 1248
EarI	CTCTTC	4 cut(s)	321, 418, 1164, 1248
Ecl136II	GAGCTC	1 cut(s)	1100
Eco130I	CCWWGG	2 cut(s)	468, 1716
Eco147I	AGGCCT	2 cut(s)	1213, 1372
Eco24I	GRGCYC	3 cut(s)	699, 1102, 1704
Eco47I	GGWCC	8 cut(s)	41, 109, 322, 569, 1304, 1411, 1744, 1816
Eco53kI	GAGCTC	1 cut(s)	1100
Eco57I	CTGAAG	5 cut(s)	692, 899, 1059, 1104, 1665
Eco81I	CCTNAGG	2 cut(s)	240, 1820
Eco88I	CYCGRG	2 cut(s)	1095, 1769
Eco91I	GGTNACC	2 cut(s)	34, 1340
EcoICRI	GAGCTC	1 cut(s)	1100
EcoO109I	RGGNCCY	4 cut(s)	322, 569, 1304, 1816
EcoO65I	GGTNACC	2 cut(s)	34, 1340
EcoRII	CCWGG	7 cut(s)	159, 1261, 1270, 1360, 1372, 1438, 1540
EcoT14I	CCWWGG	2 cut(s)	468, 1716
EcoT22I	ATGCAT	1 cut(s)	457
EcoT38I	GRGCYC	3 cut(s)	699, 1102, 1704
ErhI	CCWWGG	2 cut(s)	468, 1716
Esp3I	CGTCTC	1 cut(s)	1168
FaeI	CATG	3 cut(s)	404, 695, 1528
FaqI	GGGAC	3 cut(s)	200, 335, 555
FatI	CATG	3 cut(s)	400, 691, 1524
FauI	CCCGC	1 cut(s)	1485
FauNDI	CATATG	1 cut(s)	1506
FbaI	TGATCA	1 cut(s)	1858
FblI	GTMKAC	2 cut(s)	83, 1447
FokI	GGATG	6 cut(s)	257, 464, 608, 737, 968, 1609
FriOI	GRGCYC	3 cut(s)	699, 1102, 1704
FspBI	CTAG	5 cut(s)	260, 705, 912, 1277, 1736
FspI	TGCGCA	1 cut(s)	66
GlaI	GCGC	2 cut(s)	66, 1523
GsuI	CTGGAG	2 cut(s)	1254, 1395
HaeIII	GGCC	7 cut(s)	159, 697, 1213, 1372, 1431, 1793, 1808
HapII	CCGG	4 cut(s)	32, 39, 348, 1778
HhaI	GCGC	2 cut(s)	67, 1524
Hin1I	GRCGYC	1 cut(s)	86
Hin1II	CATG	3 cut(s)	404, 695, 1528
Hin6I	GCGC	2 cut(s)	65, 1522
HinP1I	GCGC	2 cut(s)	65, 1522
HincII	GTYRAC	4 cut(s)	84, 760, 1448, 1846
HindII	GTYRAC	4 cut(s)	84, 760, 1448, 1846
HindIII	AAGCTT	2 cut(s)	1089, 1671
HinfI	GANTC	8 cut(s)	10, 125, 367, 1044, 1335, 1510, 1706, 1772
HpaI	GTTAAC	1 cut(s)	1846
HpaII	CCGG	4 cut(s)	32, 39, 348, 1778
HphI	GGTGA	7 cut(s)	46, 698, 740, 1632, 1679, 1767, 1868
Hpy166II	GTNNAC	6 cut(s)	84, 195, 689, 760, 1448, 1846
Hpy188I	TCNGA	8 cut(s)	9, 153, 302, 649, 804, 997, 1084, 1885
Hpy8I	GTNNAC	6 cut(s)	84, 195, 689, 760, 1448, 1846
Hpy99I	CGWCG	4 cut(s)	88, 91, 101, 1452
HpyAV	CCTTC	4 cut(s)	725, 874, 898, 1034
HpyCH4III	ACNGT	3 cut(s)	899, 1009, 1853
HpyCH4IV	ACGT	4 cut(s)	86, 96, 1450, 1594
HpyF3I	CTNAG	8 cut(s)	6, 240, 510, 786, 1194, 1585, 1752, 1820
HpySE526I	ACGT	4 cut(s)	86, 96, 1450, 1594
Hsp92I	GRCGYC	1 cut(s)	86
Hsp92II	CATG	3 cut(s)	404, 695, 1528
HspAI	GCGC	2 cut(s)	65, 1522
KflI	GGGWCCC	1 cut(s)	322
KpnI	GGTACC	1 cut(s)	348
Ksp22I	TGATCA	1 cut(s)	1858
KspAI	GTTAAC	1 cut(s)	1846
Kzo9I	GATC	6 cut(s)	103, 139, 153, 203, 297, 1858
LmnI	GCTCC	7 cut(s)	34, 1231, 1243, 1273, 1387, 1567, 1699
Lsp1109I	GCAGC	7 cut(s)	79, 142, 235, 493, 769, 1513, 1724
LweI	GCATC	8 cut(s)	31, 235, 442, 464, 769, 1485, 1650, 1877
MabI	ACCWGGT	1 cut(s)	1540
MaeI	CTAG	5 cut(s)	260, 705, 912, 1277, 1736
MaeII	ACGT	4 cut(s)	86, 96, 1450, 1594
MaeIII	GTNAC	8 cut(s)	34, 118, 1009, 1031, 1340, 1720, 1773, 1828
MalI	GATC	6 cut(s)	105, 141, 155, 205, 299, 1860
MboI	GATC	6 cut(s)	103, 139, 153, 203, 297, 1858
MflI	RGATCY	2 cut(s)	103, 203
MhlI	GDGCHC	7 cut(s)	259, 699, 897, 1102, 1270, 1384, 1704
MlyI	GAGTC	3 cut(s)	119, 1053, 1781
MmeI	TCCRAC	2 cut(s)	1334, 1438
Mph1103I	ATGCAT	1 cut(s)	457
MseI	TTAA	7 cut(s)	225, 530, 981, 1367, 1689, 1845, 1894
MspCI	CTTAAG	1 cut(s)	980
MspI	CCGG	4 cut(s)	32, 39, 348, 1778
MspR9I	CCNGG	8 cut(s)	161, 349, 1263, 1272, 1362, 1374, 1440, 1542
Mva1269I	GAATGC	1 cut(s)	543
MvaI	CCWGG	7 cut(s)	161, 1263, 1272, 1362, 1374, 1440, 1542
NciI	CCSGG	1 cut(s)	349
NdeI	CATATG	1 cut(s)	1506
NdeII	GATC	6 cut(s)	103, 139, 153, 203, 297, 1858
NlaIII	CATG	3 cut(s)	404, 695, 1528
NlaIV	GGNNCC	9 cut(s)	30, 323, 324, 346, 571, 697, 1227, 1239, 1701
NmuCI	GTSAC	5 cut(s)	34, 118, 1009, 1031, 1773
NsbI	TGCGCA	1 cut(s)	66
NsiI	ATGCAT	1 cut(s)	457
NspI	RCATGY	1 cut(s)	1528
PaeR7I	CTCGAG	2 cut(s)	1095, 1769
PceI	AGGCCT	2 cut(s)	1213, 1372
PctI	GAATGC	1 cut(s)	543
PfeI	GAWTC	5 cut(s)	10, 367, 1335, 1510, 1706
PflMI	CCANNNNNTGG	1 cut(s)	1571
PinAI	ACCGGT	1 cut(s)	38
PleI	GAGTC	3 cut(s)	119, 1052, 1780
PpsI	GAGTC	3 cut(s)	119, 1052, 1780
PpuMI	RGGWCCY	4 cut(s)	322, 569, 1304, 1816
Psp124BI	GAGCTC	1 cut(s)	1102
Psp5II	RGGWCCY	4 cut(s)	322, 569, 1304, 1816
Psp6I	CCWGG	7 cut(s)	159, 1261, 1270, 1360, 1372, 1438, 1540
PspEI	GGTNACC	2 cut(s)	34, 1340
PspGI	CCWGG	7 cut(s)	159, 1261, 1270, 1360, 1372, 1438, 1540
PspN4I	GGNNCC	9 cut(s)	30, 323, 324, 346, 571, 697, 1227, 1239, 1701
PspOMI	GGGCCC	1 cut(s)	695
PspPPI	RGGWCCY	4 cut(s)	322, 569, 1304, 1816
PspXI	VCTCGAGB	1 cut(s)	1769
PstI	CTGCAG	1 cut(s)	1234
PsuI	RGATCY	2 cut(s)	103, 203
RsaI	GTAC	5 cut(s)	95, 346, 655, 1006, 1256
RsaNI	GTAC	5 cut(s)	94, 345, 654, 1005, 1255
SacI	GAGCTC	1 cut(s)	1102
SalI	GTCGAC	2 cut(s)	82, 1446
SaqAI	TTAA	7 cut(s)	225, 530, 981, 1367, 1689, 1845, 1894
Sau3AI	GATC	6 cut(s)	103, 139, 153, 203, 297, 1858
SchI	GAGTC	3 cut(s)	119, 1053, 1781
ScrFI	CCNGG	8 cut(s)	161, 349, 1263, 1272, 1362, 1374, 1440, 1542
SduI	GDGCHC	7 cut(s)	259, 699, 897, 1102, 1270, 1384, 1704
SexAI	ACCWGGT	1 cut(s)	1540
SfaNI	GCATC	8 cut(s)	31, 235, 442, 464, 769, 1485, 1650, 1877
SfcI	CTRYAG	3 cut(s)	657, 711, 1230
Sfr274I	CTCGAG	2 cut(s)	1095, 1769
SinI	GGWCC	8 cut(s)	41, 109, 322, 569, 1304, 1411, 1744, 1816
SlaI	CTCGAG	2 cut(s)	1095, 1769
SmlI	CTYRAG	4 cut(s)	980, 1095, 1683, 1769
SmoI	CTYRAG	4 cut(s)	980, 1095, 1683, 1769
SpeI	ACTAGT	1 cut(s)	704
SseBI	AGGCCT	2 cut(s)	1213, 1372
SsiI	CCGC	6 cut(s)	51, 54, 57, 580, 1478, 1499
SspI	AATATT	2 cut(s)	355, 681
SspMI	CTAG	5 cut(s)	260, 705, 912, 1277, 1736
SstI	GAGCTC	1 cut(s)	1102
StuI	AGGCCT	2 cut(s)	1213, 1372
StyD4I	CCNGG	8 cut(s)	159, 347, 1261, 1270, 1360, 1372, 1438, 1540
StyI	CCWWGG	2 cut(s)	468, 1716
TaaI	ACNGT	3 cut(s)	899, 1009, 1853
TaiI	ACGT	4 cut(s)	89, 99, 1453, 1597
TaqI	TCGA	7 cut(s)	83, 296, 1076, 1096, 1246, 1447, 1770
TaqII	GACCGA	1 cut(s)	137
TauI	GCSGC	3 cut(s)	54, 57, 1501
TfiI	GAWTC	5 cut(s)	10, 367, 1335, 1510, 1706
Tru1I	TTAA	7 cut(s)	225, 530, 981, 1367, 1689, 1845, 1894
Tru9I	TTAA	7 cut(s)	225, 530, 981, 1367, 1689, 1845, 1894
TscAI	CASTG	3 cut(s)	288, 1239, 1858
TseFI	GTSAC	5 cut(s)	34, 118, 1009, 1031, 1773
TseI	GCWGC	7 cut(s)	67, 130, 248, 506, 782, 1501, 1712
Tsp45I	GTSAC	5 cut(s)	34, 118, 1009, 1031, 1773
TspDTI	ATGAA	3 cut(s)	917, 1127, 1611
TspGWI	ACGGA	2 cut(s)	464, 1121
TspRI	CASTG	3 cut(s)	288, 1239, 1858
Van91I	CCANNNNNTGG	1 cut(s)	1571
Vha464I	CTTAAG	1 cut(s)	980
VpaK11BI	GGWCC	8 cut(s)	41, 109, 322, 569, 1304, 1411, 1744, 1816
XapI	RAATTY	4 cut(s)	303, 617, 887, 934
XbaI	TCTAGA	1 cut(s)	1735
XceI	RCATGY	1 cut(s)	1528
XhoI	CTCGAG	2 cut(s)	1095, 1769
XmiI	GTMKAC	2 cut(s)	83, 1447
XspI	CTAG	5 cut(s)	260, 705, 912, 1277, 1736
ZraI	GACGTC	1 cut(s)	87
Zsp2I	ATGCAT	1 cut(s)	457

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.