Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006072

Physical Location & Seq

Genomic Coordinates Forward (+)

20534874 .. 20539189

Gene Structure 4316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G55040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGGCTGCTTCAATCTCTCTTCTTCTCATCAAACGCATCTCTCACTTGCACATAAACCCTAAAAGCCACCGACTTTTTCAACCATTTCTCACTAAATCACTCTCTACTTCTCCACAAAGCAACACTGAATCAACCCATGAACCTAATCACAAACCCTCTTCTCTATCTTCTCGTCTTAGCTTCGTTTTCGATCAAATCGATGCTATTGAGAAACGTCACTCTGAGAAAGACGAAACCCTTGAGCGTATTCGTGCTTGGCGTCAATCTAAACAGACGCATCAGTTAAAAACTCCTCCTTCTGCTCCACAACAAGATCCGGATCTTAGAGAAGTCGAATCCGTTGTGTCTAATGATAAATTGGATTCTTGTGTTGTGCTTGAGCCGATTCAGATTGATTCTGGTGAGTTGAGTAAGGAGAAAGGTGTTATTGAGTTGGTCCATCCATGGCCGGAGTGGATGGAGTTGATGGAGAGATTGGTGAAGCAGAATTACTTTGATCATAGGAGAGAAAGAGATGATGATGATATGGTGAATAGTTTGGGGATTGATGTGTCTAGTGTTGGATTAGGTGAAGATGAGAATGTTGGAGTTGCTTTGTTTCAGGATTTTAGAGCTGTTCAAAATGCTTGTAGCAATTTTGGTAAAGACCGTTTCGATATTCTAAGGTCATTGTCGAGAAATGACATTCAAATCCTAGTCGGTCATGGATGTCCAGCGACTGATAGAAAAGTGGTTTTCTCAGGAAAACTACTGAGGAAGCGTGTTCATCTTGATGAAGGAGATGTCTGCAGTTCCTGCAGCTTGAGGAACTCATGCGAAAAGGCATTTTTGTTGACAAACAAAGAGGATGAGGCTCGAACCATTGACCTTATGCGCATTTTGTTCACCTATGGTTTTGACCCATTGAATGGAACAGTGGCCAACAAAAGTCTCCTGAAGAAAAAGTCTGTTAAGTCTGTGGTGCGTAAACTGCTGCATGAGATTGTCAAGTTAAGCGCTGTACCAATAGATCCTAATCTCACTCCACCAGTTATCAAAAGAGCGCCCCCTAAAGTCAAGCAGCCACCGCCAACTCCTAAACGACGTGTTGGCCGTGATGATGTTGAGATGAAGAAAGGAGATTGGCTATGCCCAAAGTGCGATTTCATGAACTTTGCAAAGAACACGATTTGCTTACAGTGTGATGCAAAGAGGCCAAAGAGACAGCTCCTTCCAGGAGAATGGGAATGCCCTGAATGCAACTTCTTAAACTATAGAAGAAACATGGCATGTTTTCATTGTGATTGCAAGCGTCCAGCTGATGCTATCCTAGAGAACAAACCACAAGAAACTTATCGCTTCACTGAAGCACAAACAGACAGGGTTGTGAAACGGGATGATGTTTCCAATGCATGGAACTTTGATTTTGATGACGATGAATCAGACGGAGCAGAAGTTGCTGCTTTTGAATATGCGGATTCCAGTAAAAAGAATGAAAACCTTCTCCGGGAGGGTTTGAGAGATCCTGAAGAAGAATTTGGTAATCTTCCTCCAGGAGCCCGAGAAAGTTCTGAGTTTGGCAGAAGCAGAAGACCTGGAGTTGGGTTTGATGATTTTGACGATGAAGATGACATTGATAGCTATGAAATAGACGAATCTAAAGAGAGAGATGTCCCAGTGGAAGGAGCTCGATCTTCTTTTGCTTCTGACGAGTTCTCAGAGGATGAAAAGTTTCCAGAATCAAAGTCTGGTTTTAATGCACACAGAGGAGGAAGTTCAAACTTTCACAACAGTGGAAAGAAGCATGGAAACAGTAAGGGAGGTTTCTCTAGGGATGATGAGCTCGGTTTTAGTTCAGATGATGAGGTTTCCGCCAATCCCAGGTGGAAGTCAAGCCATGTGGCTTCGACCCAGAGAGGTCCACCTTCGAGAAAACTTACTTTTGGGTCAGACGAAGAATTTGGGCTCGATTCTGATATGGAGGATGATAGTCCCAGGTCCGGTTTGAGGCGTGGACAAAGAAACAACGGTGCGAGAGGAGGGTTCAAGGGAAAACGAAGCTCCTATTCAGCTTCAGAATCTGATGATGACATGGATGATCAAGAGTACAGAGGGTCAAGTTTCTCTGGTAATAGATCGAGAGGAAGTAGAGGAAGAATGAGAGGTGGAGGACGAGGTGGTTTCAATGATAATTTTGCCTCTGATAGCTACAGGGGATCAAATGGCTCCTCGGCTAATAGATCAAGAGGGAGAGGAGGAAGAATAGGAAGCAGAAGGAGTAGTTTTGATAGTGACGATGAAGATTACAGAGGGTCAAGTTCCTCAGCTAGTAGATCAAGAGGTAACAGAGAAGATAGTGGCGGGGTTGGGGGAAGAATGGGAAGCAGAAGAGGCGGTTTTGATGATGAGTTTGATAGAAAGAGTAGCCGAGGACGCGGTTCAGGTAGTTTCAGGGGATCTAACAGAGGAGGAAGAGGAGGAGGAGGAGGAGGAAACCGGCATGGGCATAGTGATGGTAAAGACACAGACGTTGGTGATTTCAGAAACAGTCGAAGAGTTATCGAGAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RanBP

Protein Analysis

849

Amino Acids

94.86

Weight (kDa)

6.6

Isoelectric Point (pI)

57.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	371 - 399	9.1e-09	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006072)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55040
fragaria_vesca	FvH4_6g06160
malus_domestica	MD04G1203800.v1.1 MD12G1217600.v1.1
prunus_persica	Prupe.6G323900_v2.0.a1 Prupe.6G323900_v2.0.a1
pyrus_communis	pycom04g18030 pycom12g20320
rosa_chinensis	RchiOBHm_Chr1g0324471 RchiOBHm_Chr3g0455171
rosa_laevigata	RLG00000025382 RLG00000030198
rosa_multiflora	Rmu_sc0002169.1_g000027 Rmu_sc0002502.1_g000001 Rmu_sc0013000.1_g000010
rosa_roxburghii	Rroxscaffold_4G00325480 Rroxscaffold_6G00424520
rosa_rugosa	Rorug01G0046100 Rorug03G0004100 Rorug03G0004200
rosa_samantha	Rh1AG061900 Rh3AG065000 Rh3BG067100 Rh3CG065500 Rh3DG067000
rosa_wichuraiana	Rw1G005240 Rw3G005100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	875
AccB7I	CCANNNNNTGG	2 cut(s)	908, 1392
AccII	CGCG	1 cut(s)	2415
AccIII	TCCGGA	1 cut(s)	316
AciI	CCGC	6 cut(s)	1067, 1454, 1851, 2340, 2373, 2415
AclWI	GGATC	6 cut(s)	308, 327, 1004, 1496, 2203, 2443
AcoI	YGGCCR	3 cut(s)	446, 918, 1090
AcsI	RAATTY	2 cut(s)	1514, 1937
AcuI	CTGAAG	4 cut(s)	956, 1365, 1527, 2037
AcyI	GRCGYC	1 cut(s)	259
AfaI	GTAC	2 cut(s)	1002, 2087
AfeI	AGCGCT	1 cut(s)	997
AfiI	CCNNNNNNNGG	8 cut(s)	908, 1392, 1486, 1580, 1661, 1860, 1979, 1986
AflIII	ACRYGT	1 cut(s)	1084
AgsI	TTSAA	9 cut(s)	12, 80, 620, 689, 907, 1448, 1758, 2026, 2164
AjiI	CACGTC	1 cut(s)	1085
AjnI	CCWGG	5 cut(s)	1213, 1531, 1573, 1859, 1973
AjuI	GAANNNNNNNTTGG	2 cut(s)	1500, 1532
AleI	CACNNNNGTG	1 cut(s)	1770
Alw21I	GWGCWC	2 cut(s)	1669, 1824
Alw26I	GTCTC	2 cut(s)	935, 1195
AlwI	GGATC	6 cut(s)	308, 327, 1004, 1496, 2203, 2443
AlwNI	CAGNNNCTG	3 cut(s)	719, 795, 2060
Ama87I	CYCGRG	1 cut(s)	1539
Aor13HI	TCCGGA	1 cut(s)	316
Aor51HI	AGCGCT	1 cut(s)	997
AoxI	GGCC	4 cut(s)	446, 918, 1090, 1193
ApeKI	GCWGC	5 cut(s)	5, 798, 973, 1060, 1439
ApoI	RAATTY	2 cut(s)	1514, 1937
ArsI	GACNNNNNNTTYG	2 cut(s)	1922, 1954
Asp700I	GAANNNNTTC	2 cut(s)	1479, 1710
AspLEI	GCGC	3 cut(s)	876, 998, 1045
AspS9I	GGNCC	3 cut(s)	436, 1898, 1977
AsuC2I	CCSGG	1 cut(s)	1487
AsuHPI	GGTGA	6 cut(s)	413, 490, 541, 581, 877, 2525
AvaI	CYCGRG	1 cut(s)	1539
AvaII	GGWCC	3 cut(s)	436, 1898, 1977
BalI	TGGCCA	1 cut(s)	920
BanII	GRGCYC	4 cut(s)	1540, 1669, 1824, 1947
BarI	GAAGNNNNNNTAC	2 cut(s)	473, 505
BbsI	GAAGAC	1 cut(s)	1576
Bbv12I	GWGCWC	2 cut(s)	1669, 1824
BbvCI	CCTCAGC	1 cut(s)	2302
BbvI	GCAGC	4 cut(s)	810, 960, 1072, 1426
BccI	CCATC	4 cut(s)	447, 451, 460, 2486
BceAI	ACGGC	1 cut(s)	1077
BciT130I	CCWGG	5 cut(s)	1215, 1533, 1575, 1861, 1975
BclI	TGATCA	2 cut(s)	496, 2077
BcnI	CCSGG	1 cut(s)	1487
BcoDI	GTCTC	2 cut(s)	935, 1195
BfaI	CTAG	5 cut(s)	555, 695, 1310, 1809, 2307
BfmI	CTRYAG	4 cut(s)	787, 796, 1252, 2188
BfoI	RGCGCY	2 cut(s)	999, 1046
BisI	GCNGC	5 cut(s)	6, 799, 974, 1061, 1440
BlsI	GCNGC	5 cut(s)	7, 800, 975, 1062, 1441
Bme1390I	CCNGG	6 cut(s)	1215, 1487, 1533, 1575, 1861, 1975
Bme18I	GGWCC	3 cut(s)	436, 1898, 1977
BmeT110I	CYCGRG	1 cut(s)	1539
BmgBI	CACGTC	1 cut(s)	1085
BmgT120I	GGNCC	3 cut(s)	436, 1898, 1977
BmiI	GGNNCC	2 cut(s)	1537, 2206
BmrFI	CCNGG	6 cut(s)	1215, 1487, 1533, 1575, 1861, 1975
BmrI	ACTGGG	1 cut(s)	1649
BmsI	GCATC	5 cut(s)	45, 190, 286, 1174, 1291
BmuI	ACTGGG	1 cut(s)	1649
BpiI	GAAGAC	1 cut(s)	1576
BpmI	CTGGAG	2 cut(s)	1515, 1596
Bpu10I	CCTNAGC	1 cut(s)	2302
BpuEI	CTTGAG	3 cut(s)	260, 398, 823
BpuMI	CCSGG	1 cut(s)	1487
Bsa29I	ATCGAT	1 cut(s)	198
BsaBI	GATNNNNATC	2 cut(s)	318, 1014
BsaHI	GRCGYC	1 cut(s)	259
BsaJI	CCNNGG	5 cut(s)	443, 1859, 1973, 2208, 2407
BsaWI	WCCGGW	2 cut(s)	316, 1979
BsaXI	ACNNNNNCTCC	2 cut(s)	1419, 1449
Bsc4I	CCNNNNNNNGG	8 cut(s)	908, 1392, 1486, 1580, 1661, 1860, 1979, 1986
Bse118I	RCCGGY	1 cut(s)	2475
Bse1I	ACTGG	3 cut(s)	1028, 1461, 1655
Bse8I	GATNNNNATC	2 cut(s)	318, 1014
BseAI	TCCGGA	1 cut(s)	316
BseBI	CCWGG	5 cut(s)	1215, 1533, 1575, 1861, 1975
BseCI	ATCGAT	1 cut(s)	198
BseDI	CCNNGG	5 cut(s)	443, 1859, 1973, 2208, 2407
BseGI	GGATG	9 cut(s)	439, 462, 713, 853, 1381, 1708, 1819, 1969, 2080
BseJI	GATNNNNATC	2 cut(s)	318, 1014
BseLI	CCNNNNNNNGG	8 cut(s)	908, 1392, 1486, 1580, 1661, 1860, 1979, 1986
BseMII	CTCAG	6 cut(s)	213, 743, 753, 1542, 1710, 2316
BseNI	ACTGG	3 cut(s)	1028, 1461, 1655
BseXI	GCAGC	4 cut(s)	810, 960, 1072, 1426
Bsh1236I	CGCG	1 cut(s)	2415
BshFI	GGCC	4 cut(s)	448, 920, 1092, 1195
BshVI	ATCGAT	1 cut(s)	198
BsiHKAI	GWGCWC	2 cut(s)	1669, 1824
BsiHKCI	CYCGRG	1 cut(s)	1539
BsiSI	CCGG	5 cut(s)	317, 449, 1486, 1980, 2476
BslFI	GGGAC	2 cut(s)	1637, 1956
BslI	CCNNNNNNNGG	8 cut(s)	908, 1392, 1486, 1580, 1661, 1860, 1979, 1986
BsmAI	GTCTC	2 cut(s)	935, 1195
BsmFI	GGGAC	2 cut(s)	1637, 1956
BsmI	GAATGC	2 cut(s)	1232, 1241
BsnI	GGCC	4 cut(s)	448, 920, 1092, 1195
BsoBI	CYCGRG	1 cut(s)	1539
Bsp1286I	GDGCHC	4 cut(s)	1540, 1669, 1824, 1947
Bsp13I	TCCGGA	1 cut(s)	316
Bsp19I	CCATGG	1 cut(s)	443
BspACI	CCGC	6 cut(s)	1067, 1454, 1851, 2340, 2373, 2415
BspANI	GGCC	4 cut(s)	448, 920, 1092, 1195
BspCNI	CTCAG	6 cut(s)	214, 744, 752, 1543, 1709, 2315
BspDI	ATCGAT	1 cut(s)	198
BspEI	TCCGGA	1 cut(s)	316
BspFNI	CGCG	1 cut(s)	2415
BspHI	TCATGA	1 cut(s)	1146
BspLI	GGNNCC	2 cut(s)	1537, 2206
BspMAI	CTGCAG	2 cut(s)	791, 800
BspPI	GGATC	6 cut(s)	308, 327, 1004, 1496, 2203, 2443
BsrFI	RCCGGY	1 cut(s)	2475
BsrI	ACTGG	3 cut(s)	1028, 1461, 1655
BssAI	RCCGGY	1 cut(s)	2475
BssECI	CCNNGG	5 cut(s)	443, 1859, 1973, 2208, 2407
BssNI	GRCGYC	1 cut(s)	259
BssT1I	CCWWGG	1 cut(s)	443
Bst2UI	CCWGG	5 cut(s)	1215, 1533, 1575, 1861, 1975
Bst4CI	ACNGT	7 cut(s)	650, 916, 1179, 1772, 1793, 2009, 2528
Bst6I	CTCTTC	5 cut(s)	24, 163, 2362, 2446, 2527
BstACI	GRCGYC	1 cut(s)	259
BstAPI	GCANNNNNTGC	2 cut(s)	795, 1436
BstC8I	GCNNGC	1 cut(s)	1289
BstDEI	CTNAG	9 cut(s)	176, 222, 323, 662, 739, 752, 1551, 1696, 2302
BstDSI	CCRYGG	1 cut(s)	443
BstF5I	GGATG	9 cut(s)	439, 462, 713, 853, 1381, 1708, 1819, 1969, 2080
BstFNI	CGCG	1 cut(s)	2415
BstH2I	RGCGCY	2 cut(s)	999, 1046
BstHHI	GCGC	3 cut(s)	876, 998, 1045
BstMAI	GTCTC	2 cut(s)	935, 1195
BstMWI	GCNNNNNNNGC	8 cut(s)	795, 970, 1066, 1137, 1236, 1436, 2370, 2412
BstNI	CCWGG	5 cut(s)	1215, 1533, 1575, 1861, 1975
BstNSI	RCATGY	1 cut(s)	1272
BstSCI	CCNGG	6 cut(s)	1213, 1485, 1531, 1573, 1859, 1973
BstSFI	CTRYAG	4 cut(s)	787, 796, 1252, 2188
BstUI	CGCG	1 cut(s)	2415
BstV1I	GCAGC	4 cut(s)	810, 960, 1072, 1426
BstV2I	GAAGAC	1 cut(s)	1576
BstX2I	RGATCY	5 cut(s)	313, 319, 1009, 1501, 2435
BstXI	CCANNNNNNTGG	1 cut(s)	1221
BstYI	RGATCY	5 cut(s)	313, 319, 1009, 1501, 2435
Bsu15I	ATCGAT	1 cut(s)	198
BsuRI	GGCC	4 cut(s)	448, 920, 1092, 1195
BsuTUI	ATCGAT	1 cut(s)	198
BtgI	CCRYGG	1 cut(s)	443
BtrI	CACGTC	1 cut(s)	1085
BtsCI	GGATG	9 cut(s)	439, 462, 713, 853, 1381, 1708, 1819, 1969, 2080
BtsIMutI	CAGTG	6 cut(s)	123, 921, 1184, 1341, 1662, 1777
Cac8I	GCNNGC	1 cut(s)	1289
CaiI	CAGNNNCTG	3 cut(s)	719, 795, 2060
CciI	TCATGA	1 cut(s)	1146
CfoI	GCGC	3 cut(s)	876, 998, 1045
Cfr10I	RCCGGY	1 cut(s)	2475
Cfr13I	GGNCC	3 cut(s)	436, 1898, 1977
ClaI	ATCGAT	1 cut(s)	198
CseI	GACGC	4 cut(s)	248, 283, 1280, 2421
Csp6I	GTAC	2 cut(s)	1001, 2086
CspCI	CAANNNNNGTGG	2 cut(s)	1860, 1895
CviQI	GTAC	2 cut(s)	1001, 2086
DdeI	CTNAG	9 cut(s)	176, 222, 323, 662, 739, 752, 1551, 1696, 2302
EaeI	YGGCCR	3 cut(s)	446, 918, 1090
Eam1104I	CTCTTC	5 cut(s)	24, 163, 2362, 2446, 2527
EarI	CTCTTC	5 cut(s)	24, 163, 2362, 2446, 2527
EciI	GGCGGA	1 cut(s)	1840
Ecl136II	GAGCTC	2 cut(s)	1667, 1822
Eco130I	CCWWGG	1 cut(s)	443
Eco24I	GRGCYC	4 cut(s)	1540, 1669, 1824, 1947
Eco47I	GGWCC	3 cut(s)	436, 1898, 1977
Eco47III	AGCGCT	1 cut(s)	997
Eco53kI	GAGCTC	2 cut(s)	1667, 1822
Eco57I	CTGAAG	4 cut(s)	956, 1365, 1527, 2037
Eco88I	CYCGRG	1 cut(s)	1539
EcoICRI	GAGCTC	2 cut(s)	1667, 1822
EcoRII	CCWGG	5 cut(s)	1213, 1531, 1573, 1859, 1973
EcoT14I	CCWWGG	1 cut(s)	443
EcoT22I	ATGCAT	1 cut(s)	1393
EcoT38I	GRGCYC	4 cut(s)	1540, 1669, 1824, 1947
ErhI	CCWWGG	1 cut(s)	443
FaqI	GGGAC	2 cut(s)	1637, 1956
FauI	CCCGC	1 cut(s)	2333
FbaI	TGATCA	2 cut(s)	496, 2077
Fnu4HI	GCNGC	5 cut(s)	6, 799, 974, 1061, 1440
FokI	GGATG	9 cut(s)	426, 469, 720, 860, 1388, 1715, 1826, 1976, 2087
FriOI	GRGCYC	4 cut(s)	1540, 1669, 1824, 1947
Fsp4HI	GCNGC	5 cut(s)	6, 799, 974, 1061, 1440
FspAI	RTGCGCAY	1 cut(s)	875
FspBI	CTAG	5 cut(s)	555, 695, 1310, 1809, 2307
FspI	TGCGCA	1 cut(s)	875
GlaI	GCGC	3 cut(s)	875, 997, 1044
GluI	GCNGC	5 cut(s)	6, 799, 974, 1061, 1440
GsuI	CTGGAG	2 cut(s)	1515, 1596
HaeII	RGCGCY	2 cut(s)	999, 1046
HaeIII	GGCC	4 cut(s)	448, 920, 1092, 1195
HapII	CCGG	5 cut(s)	317, 449, 1486, 1980, 2476
HgaI	GACGC	4 cut(s)	248, 283, 1280, 2421
HhaI	GCGC	3 cut(s)	876, 998, 1045
Hin1I	GRCGYC	1 cut(s)	259
Hin6I	GCGC	3 cut(s)	874, 996, 1043
HinP1I	GCGC	3 cut(s)	874, 996, 1043
HincII	GTYRAC	1 cut(s)	834
HindII	GTYRAC	1 cut(s)	834
HpaII	CCGG	5 cut(s)	317, 449, 1486, 1980, 2476
HphI	GGTGA	6 cut(s)	413, 490, 541, 581, 877, 2525
Hpy166II	GTNNAC	5 cut(s)	834, 885, 968, 1901, 1994
Hpy8I	GTNNAC	5 cut(s)	834, 885, 968, 1901, 1994
Hpy99I	CGWCG	1 cut(s)	1086
HpyAV	CCTTC	7 cut(s)	306, 770, 1220, 1490, 1655, 1914, 2247
HpyCH4III	ACNGT	7 cut(s)	650, 916, 1179, 1772, 1793, 2009, 2528
HpyCH4IV	ACGT	3 cut(s)	214, 1084, 2508
HpyF10VI	GCNNNNNNNGC	8 cut(s)	795, 970, 1066, 1137, 1236, 1436, 2370, 2412
HpyF3I	CTNAG	9 cut(s)	176, 222, 323, 662, 739, 752, 1551, 1696, 2302
HpySE526I	ACGT	3 cut(s)	214, 1084, 2508
Hsp92I	GRCGYC	1 cut(s)	259
HspAI	GCGC	3 cut(s)	874, 996, 1043
Kpn2I	TCCGGA	1 cut(s)	316
Ksp22I	TGATCA	2 cut(s)	496, 2077
LmnI	GCTCC	7 cut(s)	307, 1212, 1427, 1535, 1664, 2045, 2210
Lsp1109I	GCAGC	4 cut(s)	810, 960, 1072, 1426
LweI	GCATC	5 cut(s)	45, 190, 286, 1174, 1291
MaeI	CTAG	5 cut(s)	555, 695, 1310, 1809, 2307
MaeII	ACGT	3 cut(s)	214, 1084, 2508
MaeIII	GTNAC	3 cut(s)	215, 2270, 2321
MflI	RGATCY	5 cut(s)	313, 319, 1009, 1501, 2435
MhlI	GDGCHC	4 cut(s)	1540, 1669, 1824, 1947
MlsI	TGGCCA	1 cut(s)	920
MluCI	AATT	6 cut(s)	356, 487, 634, 1514, 1937, 2170
MluNI	TGGCCA	1 cut(s)	920
MmeI	TCCRAC	2 cut(s)	541, 565
Mox20I	TGGCCA	1 cut(s)	920
Mph1103I	ATGCAT	1 cut(s)	1393
MroI	TCCGGA	1 cut(s)	316
MroXI	GAANNNNTTC	2 cut(s)	1479, 1710
MscI	TGGCCA	1 cut(s)	920
MseI	TTAA	5 cut(s)	284, 951, 992, 1247, 1734
MslI	CAYNNNNRTG	3 cut(s)	771, 1770, 2490
Msp20I	TGGCCA	1 cut(s)	920
MspA1I	CMGCKG	1 cut(s)	1298
MspI	CCGG	5 cut(s)	317, 449, 1486, 1980, 2476
MspR9I	CCNGG	6 cut(s)	1215, 1487, 1533, 1575, 1861, 1975
Mva1269I	GAATGC	2 cut(s)	1232, 1241
MvaI	CCWGG	5 cut(s)	1215, 1533, 1575, 1861, 1975
MvnI	CGCG	1 cut(s)	2415
MwoI	GCNNNNNNNGC	8 cut(s)	795, 970, 1066, 1137, 1236, 1436, 2370, 2412
NciI	CCSGG	1 cut(s)	1487
NcoI	CCATGG	1 cut(s)	443
NlaIV	GGNNCC	2 cut(s)	1537, 2206
NmeAIII	GCCGAG	2 cut(s)	2189, 2432
NmuCI	GTSAC	2 cut(s)	215, 2270
NsbI	TGCGCA	1 cut(s)	875
NsiI	ATGCAT	1 cut(s)	1393
NspI	RCATGY	1 cut(s)	1272
OliI	CACNNNNGTG	1 cut(s)	1770
PagI	TCATGA	1 cut(s)	1146
PcsI	WCGNNNNNNNCGW	3 cut(s)	195, 256, 1090
PctI	GAATGC	2 cut(s)	1232, 1241
PdmI	GAANNNNTTC	2 cut(s)	1479, 1710
PflMI	CCANNNNNTGG	2 cut(s)	908, 1392
PfoI	TCCNGGA	3 cut(s)	1213, 1485, 1531
PkrI	GCNGC	5 cut(s)	7, 800, 975, 1062, 1441
Psp124BI	GAGCTC	2 cut(s)	1669, 1824
Psp6I	CCWGG	5 cut(s)	1213, 1531, 1573, 1859, 1973
PspGI	CCWGG	5 cut(s)	1213, 1531, 1573, 1859, 1973
PspN4I	GGNNCC	2 cut(s)	1537, 2206
PspPI	GGNCC	3 cut(s)	436, 1898, 1977
PstI	CTGCAG	2 cut(s)	791, 800
PstNI	CAGNNNCTG	3 cut(s)	719, 795, 2060
PsuI	RGATCY	5 cut(s)	313, 319, 1009, 1501, 2435
PvuII	CAGCTG	1 cut(s)	1298
RsaI	GTAC	2 cut(s)	1002, 2087
RsaNI	GTAC	2 cut(s)	1001, 2086
RseI	CAYNNNNRTG	3 cut(s)	771, 1770, 2490
SacI	GAGCTC	2 cut(s)	1669, 1824
SaqAI	TTAA	5 cut(s)	284, 951, 992, 1247, 1734
SatI	GCNGC	5 cut(s)	6, 799, 974, 1061, 1440
Sau96I	GGNCC	3 cut(s)	436, 1898, 1977
ScrFI	CCNGG	6 cut(s)	1215, 1487, 1533, 1575, 1861, 1975
SduI	GDGCHC	4 cut(s)	1540, 1669, 1824, 1947
SfaNI	GCATC	5 cut(s)	45, 190, 286, 1174, 1291
SfcI	CTRYAG	4 cut(s)	787, 796, 1252, 2188
SinI	GGWCC	3 cut(s)	436, 1898, 1977
SmiMI	CAYNNNNRTG	3 cut(s)	771, 1770, 2490
SmlI	CTYRAG	3 cut(s)	239, 377, 802
SmoI	CTYRAG	3 cut(s)	239, 377, 802
Sse9I	AATT	6 cut(s)	356, 487, 634, 1514, 1937, 2170
SsiI	CCGC	6 cut(s)	1067, 1454, 1851, 2340, 2373, 2415
SspMI	CTAG	5 cut(s)	555, 695, 1310, 1809, 2307
SstI	GAGCTC	2 cut(s)	1669, 1824
StyD4I	CCNGG	6 cut(s)	1213, 1485, 1531, 1573, 1859, 1973
StyI	CCWWGG	1 cut(s)	443
TaaI	ACNGT	7 cut(s)	650, 916, 1179, 1772, 1793, 2009, 2528
TaiI	ACGT	3 cut(s)	217, 1087, 2511
TaqII	GACCGA	1 cut(s)	689
TasI	AATT	6 cut(s)	356, 487, 634, 1514, 1937, 2170
TatI	WGTACW	1 cut(s)	2085
Tru1I	TTAA	5 cut(s)	284, 951, 992, 1247, 1734
Tru9I	TTAA	5 cut(s)	284, 951, 992, 1247, 1734
TscAI	CASTG	6 cut(s)	130, 921, 1184, 1348, 1662, 1777
TseFI	GTSAC	2 cut(s)	215, 2270
TseI	GCWGC	5 cut(s)	5, 798, 973, 1060, 1439
Tsp45I	GTSAC	2 cut(s)	215, 2270
TspGWI	ACGGA	2 cut(s)	328, 1440
TspRI	CASTG	6 cut(s)	130, 921, 1184, 1348, 1662, 1777
Van91I	CCANNNNNTGG	2 cut(s)	908, 1392
VpaK11BI	GGWCC	3 cut(s)	436, 1898, 1977
XapI	RAATTY	2 cut(s)	1514, 1937
XceI	RCATGY	1 cut(s)	1272
XcmI	CCANNNNNNNNNTGG	1 cut(s)	450
XmnI	GAANNNNTTC	2 cut(s)	1479, 1710
XspI	CTAG	5 cut(s)	555, 695, 1310, 1809, 2307
Zsp2I	ATGCAT	1 cut(s)	1393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.