Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0006072

Physical Location & Seq

Genomic Coordinates Reverse (-)

28989940 .. 28994262

Gene Structure 4323 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1203800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGGCACAGACTCCATACTCCTTGCTCCTCCTCAAACGCCTATCTCGCTGTTCCCAAAACCCAAAACCCCCTCCGGTTCTCCTCTCTCTCCTTAAACCCTTCTCCACCTCCCCAACCCCAATCTCCTCCGCGGACCCAAAACCCTCCTCCCTCTCCGCTCGCCTGAGCTTCGTCTTCGACCAAATCGACGCCATCGACAAAGAACGCTCCGAGAAGGATCAGACCCTCCAGAAAATAAGAGCTTGGCGTGAATCGAAAAAGTCCCAAATTGACCCGGAATTAGGGATGGGAGTTGGCAGTCAGAGTGGAAATGATGCTCATTTGGTCGATTCTGTATCGGTTTCGACCGGGTCGGAGAGGGTGGAGAAGCCGGTGGTGGCTAAGCAGGAGGTGGAGGTGGTGCACCCGTGGCCGGAGTGGATTGAACTGATGGAGAGGCTGGTGCAGCAGAACTACTTTGATCATAGGAGGGTGGACGAGGACAGAATGGTGCAAGATATCGGCTTTGATCCCTCTGAAGCTGTTTTTCGAGCGGAGGAAGATGCCCGAGGTATTGATTTCAAGGATTTCGAGGCTGTCCACACAGCGTGTCTTAATTTCGGGAAGGACCGATTCGATATCATAAGGTCCTTGTCGAGACAGGATATTCAGGTTTTGGTGGGTTTTGGATGCCCGAGTACGGACAAGAAGGTGGTTTTCTCATCAAAACTATTAAGGAAGCATACCCATCTTGATGAAGGCGATGTTGTCAAGCTGAGTGCAGTTCCAATAGATCCTAATCTTCCACCTCCAGTAATCAAAAAGCCACCACCAAAAGTAAAGCAGCCTCCTCCCCCTCCAAGAAGACGAGTTGGATGGGATGACATTGAGATGAAAAAAGGGGACTGGCTGTGCTCGAAGTTATTTGTTGAGATTGTCTCCAATTTCTCACGTGTTCTTGAATTGTTGGAGCGCCCACCGGATGAATACCTGGAGAACAAAGTGCAAGAAGTGCAGCGTGGCCCTAGGACAAGAATGGGGAAGACGGCAGTTCTTCATGGGGACGCTAATGCCTGGAATTTTAATTTTGATGACAATGAGTCAGATGGAGCAGATGTTGCTGCTTTTGAGTATGCAGATTCTTCAGTGAGGGATGAAAATTCTCTTGGTAACCAGGCTCAAGGACAAGATTTTGGACACCGTGAAAACAATTTGAGTAAAGATAGCAGAGTACCAAGGGGCAACAATGAAGAATACTTCGATGCTGATACTATTAGGCCAGGGAGAGGGTTTGATGATTTCGATGATGAAGATGATGATATTGACAATTACGAGTTAGACACTCACAATAAAACTTCAGCACAGGATGCTTCAATTGATTTTTCTGAGTTTGAAGGGTCCGAATCTGAAGACATTGAAAACTCTGACAATAGCTTACAAGGTCGTCGAAGAACAAAGTCGTCTTCATACAATAAGCCATTTAAGCCTACACGTCAAAGGGCAGCATTCTCTGTCTCGGATGATGATGAACTTGATGTAGATTTTGACAAAGAGCTTTCAGTCCATCCCAACTGGAAATCTAGTCATGTTGCTGATTCTAGATCAAGAGGTAGGGGTAGAACTACACCTGGTCCATCCAAGAGATTTAGCTTCGGTTCTGATGATGAACTTGGGCTGTCGGATGATGATCTAGATCAAAACTTTGGAGCCAGGCGAGGTAGATCAAATAATTTGGATTCTAAGAGAAAAGGTTTTCAGAGGAGAGGAAACTTCGATATGGAAGATGATTCAGTTTCTGGTTCAGAATCAGACAATGGTTTTCAATCTCATAAAAATAGGCCTAGAAGGAATAAAGAAAACAATTTCAAAGGCCGTGGCGGCCCTAACTTTACCAGAGAGACACAATTTGAATCCAATGGAATGAAGGGTGGAAGGAGGAACTCTTCCAACGATGATTTTGATGGATCAACACGAGGGTCTCGTGGTAATAATAGAGGGCTTCGAGGGAATGATTTTGATGGGCCGAGAATGAGTAACAGAGGTAGTGATACTCGGAGTTTCAACAGTCCTAGAAGAGAAGGATTTGGAAATGGTCGTGGGAGGAACTCGTTCAATGGTGATTTTGATAGATCAGCACGAGGATCTCGCAGTAATAACAAAGGATATCGAGGGAACGATTTTGATGGGCAAAGAATGAGTAACAGAGGGGACGATGCACATAAATTCAAGGGACCTAGGAGAGAAGGATTTGGAAAGCAGCAGAGTGGAAGGGTTAATGAATATGGGAGGGACAAGGACAGGGGACCTGAAGAATTTAGAAACAGCAGACGCGTTATTGAAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RanBP

Protein Analysis

775

Amino Acids

87.53

Weight (kDa)

6.05

Isoelectric Point (pI)

46.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006072)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55040
fragaria_vesca	FvH4_6g06160
malus_domestica	MD04G1203800.v1.1 MD12G1217600.v1.1
prunus_persica	Prupe.6G323900_v2.0.a1 Prupe.6G323900_v2.0.a1
pyrus_communis	pycom04g18030 pycom12g20320
rosa_chinensis	RchiOBHm_Chr1g0324471 RchiOBHm_Chr3g0455171
rosa_laevigata	RLG00000025382 RLG00000030198
rosa_multiflora	Rmu_sc0002169.1_g000027 Rmu_sc0002502.1_g000001 Rmu_sc0013000.1_g000010
rosa_roxburghii	Rroxscaffold_4G00325480 Rroxscaffold_6G00424520
rosa_rugosa	Rorug01G0046100 Rorug03G0004100 Rorug03G0004200
rosa_samantha	Rh1AG061900 Rh3AG065000 Rh3BG067100 Rh3CG065500 Rh3DG067000
rosa_wichuraiana	Rw1G005240 Rw3G005100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	158, 533
AccII	CGCG	2 cut(s)	131, 2310
AciI	CCGC	5 cut(s)	129, 131, 156, 533, 1857
AclWI	GGATC	5 cut(s)	225, 503, 767, 1951, 2128
AcoI	YGGCCR	1 cut(s)	410
AcsI	RAATTY	4 cut(s)	1057, 1138, 2201, 2291
AcuI	CTGAAG	5 cut(s)	537, 1107, 1320, 1407, 2307
AcvI	CACGTG	1 cut(s)	932
AcyI	GRCGYC	1 cut(s)	189
AdeI	CACNNNGTG	1 cut(s)	588
AfaI	GTAC	2 cut(s)	679, 1212
AfiI	CCNNNNNNNGG	4 cut(s)	281, 412, 679, 1265
AflIII	ACRYGT	3 cut(s)	931, 1469, 2308
AhdI	GACNNNNNGTC	1 cut(s)	1078
AjiI	CACGTC	1 cut(s)	1472
AjnI	CCWGG	6 cut(s)	969, 1052, 1152, 1258, 1606, 1688
AjuI	GAANNNNNNNTTGG	2 cut(s)	1128, 1160
AluBI	AGCT	7 cut(s)	168, 242, 521, 754, 1413, 1534, 1629
AluI	AGCT	7 cut(s)	168, 242, 521, 754, 1413, 1534, 1629
Alw21I	GWGCWC	2 cut(s)	405, 896
Alw26I	GTCTC	5 cut(s)	631, 922, 1498, 1871, 1962
Alw44I	GTGCAC	1 cut(s)	401
AlwI	GGATC	5 cut(s)	225, 503, 767, 1951, 2128
AlwNI	CAGNNNCTG	1 cut(s)	1775
Ama87I	CYCGRG	2 cut(s)	546, 673
AoxI	GGCC	7 cut(s)	410, 1000, 1256, 1817, 1849, 1858, 2000
ApaLI	GTGCAC	1 cut(s)	401
ApeKI	GCWGC	6 cut(s)	445, 823, 994, 1100, 1481, 2236
ApoI	RAATTY	4 cut(s)	1057, 1138, 2201, 2291
Asp700I	GAANNNNTTC	1 cut(s)	2087
AspA2I	CCTAGG	2 cut(s)	1004, 2213
AspLEI	GCGC	1 cut(s)	954
AsuC2I	CCSGG	2 cut(s)	275, 349
AsuHPI	GGTGA	1 cut(s)	2108
AvaI	CYCGRG	2 cut(s)	546, 673
AvaII	GGWCC	7 cut(s)	133, 607, 627, 1377, 1610, 2210, 2282
AvrII	CCTAGG	2 cut(s)	1004, 2213
BaeGI	GKGCMC	1 cut(s)	405
BauI	CACGAG	3 cut(s)	1950, 1959, 2115
BbrPI	CACGTG	1 cut(s)	932
BbsI	GAAGAC	5 cut(s)	166, 850, 1028, 1395, 1434
Bbv12I	GWGCWC	2 cut(s)	405, 896
BbvI	GCAGC	6 cut(s)	457, 835, 1006, 1087, 1493, 2248
BceAI	ACGGC	2 cut(s)	1041, 1836
BciT130I	CCWGG	6 cut(s)	971, 1054, 1154, 1260, 1608, 1690
BclI	TGATCA	1 cut(s)	460
BcnI	CCSGG	2 cut(s)	275, 349
BcoDI	GTCTC	5 cut(s)	631, 922, 1498, 1871, 1962
BfaI	CTAG	7 cut(s)	1005, 1560, 1578, 1670, 1821, 2049, 2214
BfoI	RGCGCY	1 cut(s)	955
BglI	GCCNNNNNGGC	1 cut(s)	1857
BisI	GCNGC	7 cut(s)	446, 824, 995, 1101, 1482, 1858, 2237
BlnI	CCTAGG	2 cut(s)	1004, 2213
BlpI	GCTNAGC	1 cut(s)	381
BlsI	GCNGC	7 cut(s)	447, 825, 996, 1102, 1483, 1859, 2238
Bme1390I	CCNGG	8 cut(s)	275, 349, 971, 1054, 1154, 1260, 1608, 1690
Bme18I	GGWCC	7 cut(s)	133, 607, 627, 1377, 1610, 2210, 2282
BmeRI	GACNNNNNGTC	1 cut(s)	1078
BmeT110I	CYCGRG	2 cut(s)	546, 673
BmgBI	CACGTC	1 cut(s)	1472
BmiI	GGNNCC	5 cut(s)	135, 1378, 1687, 2211, 2283
BmrFI	CCNGG	8 cut(s)	275, 349, 971, 1054, 1154, 1260, 1608, 1690
BmsI	GCATC	6 cut(s)	304, 532, 659, 1231, 1336, 2182
BpiI	GAAGAC	5 cut(s)	166, 850, 1028, 1395, 1434
BplI	GAGNNNNNCTC	2 cut(s)	902, 934
BpmI	CTGGAG	3 cut(s)	212, 774, 992
Bpu10I	CCTNAGC	1 cut(s)	164
Bpu1102I	GCTNAGC	1 cut(s)	381
BpuEI	CTTGAG	1 cut(s)	1143
BpuMI	CCSGG	2 cut(s)	275, 349
BsaAI	YACGTR	1 cut(s)	932
BsaBI	GATNNNNATC	3 cut(s)	777, 1665, 1671
BsaHI	GRCGYC	1 cut(s)	189
BsaI	GGTCTC	1 cut(s)	1962
BsaJI	CCNNGG	8 cut(s)	129, 407, 547, 1004, 1214, 1259, 1852, 2213
BsaWI	WCCGGW	2 cut(s)	73, 958
BsaXI	ACNNNNNCTCC	2 cut(s)	1080, 1110
Bsc4I	CCNNNNNNNGG	4 cut(s)	281, 412, 679, 1265
Bse118I	RCCGGY	1 cut(s)	370
Bse1I	ACTGG	3 cut(s)	791, 890, 1556
Bse8I	GATNNNNATC	3 cut(s)	777, 1665, 1671
BseBI	CCWGG	6 cut(s)	971, 1054, 1154, 1260, 1608, 1690
BseDI	CCNNGG	8 cut(s)	129, 407, 547, 1004, 1214, 1259, 1852, 2213
BseJI	GATNNNNATC	3 cut(s)	777, 1665, 1671
BseLI	CCNNNNNNNGG	4 cut(s)	281, 412, 679, 1265
BseMII	CTCAG	3 cut(s)	155, 746, 1356
BseNI	ACTGG	3 cut(s)	791, 890, 1556
BseRI	GAGGAG	7 cut(s)	17, 20, 71, 115, 136, 819, 1753
BseSI	GKGCMC	1 cut(s)	405
BseXI	GCAGC	6 cut(s)	457, 835, 1006, 1087, 1493, 2248
BsgI	GTGCAG	3 cut(s)	464, 780, 1013
Bsh1236I	CGCG	2 cut(s)	131, 2310
Bsh1285I	CGRYCG	1 cut(s)	348
BshFI	GGCC	7 cut(s)	412, 1002, 1258, 1819, 1851, 1860, 2002
BsiEI	CGRYCG	1 cut(s)	348
BsiHKAI	GWGCWC	2 cut(s)	405, 896
BsiHKCI	CYCGRG	2 cut(s)	546, 673
BsiSI	CCGG	6 cut(s)	74, 275, 348, 371, 413, 959
BslFI	GGGAC	7 cut(s)	247, 896, 1055, 2201, 2223, 2282, 2295
BslI	CCNNNNNNNGG	4 cut(s)	281, 412, 679, 1265
BsmAI	GTCTC	5 cut(s)	631, 922, 1498, 1871, 1962
BsmFI	GGGAC	7 cut(s)	247, 896, 1055, 2201, 2223, 2282, 2295
BsmI	GAATGC	1 cut(s)	1484
BsnI	GGCC	7 cut(s)	412, 1002, 1258, 1819, 1851, 1860, 2002
Bso31I	GGTCTC	1 cut(s)	1962
BsoBI	CYCGRG	2 cut(s)	546, 673
Bsp1286I	GDGCHC	2 cut(s)	405, 896
Bsp1720I	GCTNAGC	1 cut(s)	381
BspACI	CCGC	5 cut(s)	129, 131, 156, 533, 1857
BspANI	GGCC	7 cut(s)	412, 1002, 1258, 1819, 1851, 1860, 2002
BspCNI	CTCAG	3 cut(s)	156, 747, 1357
BspFNI	CGCG	2 cut(s)	131, 2310
BspLI	GGNNCC	5 cut(s)	135, 1378, 1687, 2211, 2283
BspPI	GGATC	5 cut(s)	225, 503, 767, 1951, 2128
BspTNI	GGTCTC	1 cut(s)	1962
BsrBI	CCGCTC	2 cut(s)	158, 533
BsrFI	RCCGGY	1 cut(s)	370
BsrI	ACTGG	3 cut(s)	791, 890, 1556
BssAI	RCCGGY	1 cut(s)	370
BssECI	CCNNGG	8 cut(s)	129, 407, 547, 1004, 1214, 1259, 1852, 2213
BssNI	GRCGYC	1 cut(s)	189
BssSI	CACGAG	3 cut(s)	1950, 1959, 2115
BssT1I	CCWWGG	3 cut(s)	1004, 1214, 2213
Bst2BI	CACGAG	3 cut(s)	1950, 1959, 2115
Bst2UI	CCWGG	6 cut(s)	971, 1054, 1154, 1260, 1608, 1690
Bst4CI	ACNGT	2 cut(s)	1181, 2045
Bst6I	CTCTTC	2 cut(s)	1927, 2047
BstACI	GRCGYC	1 cut(s)	189
BstAPI	GCANNNNNTGC	3 cut(s)	991, 1097, 1346
BstBAI	YACGTR	1 cut(s)	932
BstC8I	GCNNGC	1 cut(s)	160
BstDEI	CTNAG	5 cut(s)	164, 381, 755, 1365, 1719
BstDSI	CCRYGG	3 cut(s)	129, 407, 1852
BstEII	GGTNACC	1 cut(s)	1148
BstFNI	CGCG	2 cut(s)	131, 2310
BstH2I	RGCGCY	1 cut(s)	955
BstHHI	GCGC	1 cut(s)	954
BstMAI	GTCTC	5 cut(s)	631, 922, 1498, 1871, 1962
BstMCI	CGRYCG	1 cut(s)	348
BstMWI	GCNNNNNNNGC	8 cut(s)	45, 409, 445, 991, 1097, 1346, 1462, 1857
BstNI	CCWGG	6 cut(s)	971, 1054, 1154, 1260, 1608, 1690
BstPI	GGTNACC	1 cut(s)	1148
BstSCI	CCNGG	8 cut(s)	273, 347, 969, 1052, 1152, 1258, 1606, 1688
BstSLI	GKGCMC	1 cut(s)	405
BstUI	CGCG	2 cut(s)	131, 2310
BstV1I	GCAGC	6 cut(s)	457, 835, 1006, 1087, 1493, 2248
BstV2I	GAAGAC	5 cut(s)	166, 850, 1028, 1395, 1434
BstX2I	RGATCY	2 cut(s)	772, 2120
BstYI	RGATCY	2 cut(s)	772, 2120
BsuRI	GGCC	7 cut(s)	412, 1002, 1258, 1819, 1851, 1860, 2002
BtgI	CCRYGG	3 cut(s)	129, 407, 1852
BtgZI	GCGATG	1 cut(s)	756
BtrI	CACGTC	1 cut(s)	1472
BtsIMutI	CAGTG	1 cut(s)	1131
Cac8I	GCNNGC	1 cut(s)	160
CaiI	CAGNNNCTG	1 cut(s)	1775
CfoI	GCGC	1 cut(s)	954
Cfr10I	RCCGGY	1 cut(s)	370
Cfr42I	CCGCGG	1 cut(s)	132
CseI	GACGC	3 cut(s)	197, 1052, 2316
CsiI	ACCWGGT	1 cut(s)	1606
Csp6I	GTAC	2 cut(s)	678, 1211
CspCI	CAANNNNNGTGG	2 cut(s)	1834, 1869
CviAII	CATG	2 cut(s)	1037, 1565
CviQI	GTAC	2 cut(s)	678, 1211
DdeI	CTNAG	5 cut(s)	164, 381, 755, 1365, 1719
DraIII	CACNNNGTG	1 cut(s)	588
DriI	GACNNNNNGTC	1 cut(s)	1078
EaeI	YGGCCR	1 cut(s)	410
Eam1104I	CTCTTC	2 cut(s)	1927, 2047
Eam1105I	GACNNNNNGTC	1 cut(s)	1078
EarI	CTCTTC	2 cut(s)	1927, 2047
Eco130I	CCWWGG	3 cut(s)	1004, 1214, 2213
Eco147I	AGGCCT	1 cut(s)	1819
Eco31I	GGTCTC	1 cut(s)	1962
Eco32I	GATATC	3 cut(s)	499, 619, 2144
Eco47I	GGWCC	7 cut(s)	133, 607, 627, 1377, 1610, 2210, 2282
Eco57I	CTGAAG	5 cut(s)	537, 1107, 1320, 1407, 2307
Eco72I	CACGTG	1 cut(s)	932
Eco88I	CYCGRG	2 cut(s)	546, 673
Eco91I	GGTNACC	1 cut(s)	1148
EcoO109I	RGGNCCY	3 cut(s)	627, 2210, 2282
EcoO65I	GGTNACC	1 cut(s)	1148
EcoRII	CCWGG	6 cut(s)	969, 1052, 1152, 1258, 1606, 1688
EcoRV	GATATC	3 cut(s)	499, 619, 2144
EcoT14I	CCWWGG	3 cut(s)	1004, 1214, 2213
ErhI	CCWWGG	3 cut(s)	1004, 1214, 2213
FaeI	CATG	2 cut(s)	1040, 1568
FaqI	GGGAC	7 cut(s)	247, 896, 1055, 2201, 2223, 2282, 2295
FatI	CATG	2 cut(s)	1036, 1564
FbaI	TGATCA	1 cut(s)	460
Fnu4HI	GCNGC	7 cut(s)	446, 824, 995, 1101, 1482, 1858, 2237
Fsp4HI	GCNGC	7 cut(s)	446, 824, 995, 1101, 1482, 1858, 2237
FspBI	CTAG	7 cut(s)	1005, 1560, 1578, 1670, 1821, 2049, 2214
GlaI	GCGC	1 cut(s)	953
GluI	GCNGC	7 cut(s)	446, 824, 995, 1101, 1482, 1858, 2237
GsuI	CTGGAG	3 cut(s)	212, 774, 992
HaeII	RGCGCY	1 cut(s)	955
HaeIII	GGCC	7 cut(s)	412, 1002, 1258, 1819, 1851, 1860, 2002
HapII	CCGG	6 cut(s)	74, 275, 348, 371, 413, 959
HgaI	GACGC	3 cut(s)	197, 1052, 2316
HhaI	GCGC	1 cut(s)	954
Hin1I	GRCGYC	1 cut(s)	189
Hin1II	CATG	2 cut(s)	1040, 1568
Hin6I	GCGC	1 cut(s)	952
HinP1I	GCGC	1 cut(s)	952
HpaII	CCGG	6 cut(s)	74, 275, 348, 371, 413, 959
HphI	GGTGA	1 cut(s)	2108
Hpy166II	GTNNAC	3 cut(s)	403, 475, 580
Hpy188III	TCNNGA	8 cut(s)	229, 601, 636, 731, 938, 1578, 1584, 1670
Hpy8I	GTNNAC	3 cut(s)	403, 475, 580
Hpy99I	CGWCG	2 cut(s)	191, 1428
HpyCH4III	ACNGT	2 cut(s)	1181, 2045
HpyCH4IV	ACGT	2 cut(s)	931, 1471
HpyCH4V	TGCA	8 cut(s)	403, 445, 493, 761, 985, 994, 1115, 2195
HpyF10VI	GCNNNNNNNGC	8 cut(s)	45, 409, 445, 991, 1097, 1346, 1462, 1857
HpyF3I	CTNAG	5 cut(s)	164, 381, 755, 1365, 1719
HpySE526I	ACGT	2 cut(s)	931, 1471
Hsp92I	GRCGYC	1 cut(s)	189
Hsp92II	CATG	2 cut(s)	1040, 1568
HspAI	GCGC	1 cut(s)	952
Ksp22I	TGATCA	1 cut(s)	460
KspI	CCGCGG	1 cut(s)	132
LmnI	GCTCC	5 cut(s)	30, 212, 949, 1088, 1685
Lsp1109I	GCAGC	6 cut(s)	457, 835, 1006, 1087, 1493, 2248
LweI	GCATC	6 cut(s)	304, 532, 659, 1231, 1336, 2182
MabI	ACCWGGT	1 cut(s)	1606
MaeI	CTAG	7 cut(s)	1005, 1560, 1578, 1670, 1821, 2049, 2214
MaeII	ACGT	2 cut(s)	931, 1471
MaeIII	GTNAC	3 cut(s)	1148, 2012, 2177
MbiI	CCGCTC	2 cut(s)	158, 533
MfeI	CAATTG	1 cut(s)	1353
MflI	RGATCY	2 cut(s)	772, 2120
MhlI	GDGCHC	2 cut(s)	405, 896
MluI	ACGCGT	1 cut(s)	2308
MlyI	GAGTC	2 cut(s)	4, 1088
MmeI	TCCRAC	5 cut(s)	333, 832, 927, 1638, 1950
MroXI	GAANNNNTTC	1 cut(s)	2087
MseI	TTAA	6 cut(s)	93, 594, 713, 1062, 1461, 2253
MslI	CAYNNNNRTG	2 cut(s)	732, 869
MspA1I	CMGCKG	1 cut(s)	131
MspI	CCGG	6 cut(s)	74, 275, 348, 371, 413, 959
MspR9I	CCNGG	8 cut(s)	275, 349, 971, 1054, 1154, 1260, 1608, 1690
MunI	CAATTG	1 cut(s)	1353
Mva1269I	GAATGC	1 cut(s)	1484
MvaI	CCWGG	6 cut(s)	971, 1054, 1154, 1260, 1608, 1690
MvnI	CGCG	2 cut(s)	131, 2310
MwoI	GCNNNNNNNGC	8 cut(s)	45, 409, 445, 991, 1097, 1346, 1462, 1857
NciI	CCSGG	2 cut(s)	275, 349
NlaIII	CATG	2 cut(s)	1040, 1568
NlaIV	GGNNCC	5 cut(s)	135, 1378, 1687, 2211, 2283
NmeAIII	GCCGAG	1 cut(s)	2028
PceI	AGGCCT	1 cut(s)	1819
PcsI	WCGNNNNNNNCGW	3 cut(s)	183, 192, 1957
PctI	GAATGC	1 cut(s)	1484
PdmI	GAANNNNTTC	1 cut(s)	2087
PflFI	GACNNNGTC	1 cut(s)	349
PkrI	GCNGC	7 cut(s)	447, 825, 996, 1102, 1483, 1859, 2238
PleI	GAGTC	2 cut(s)	4, 1087
PmaCI	CACGTG	1 cut(s)	932
PmlI	CACGTG	1 cut(s)	932
PpsI	GAGTC	2 cut(s)	4, 1087
Ppu21I	YACGTR	1 cut(s)	932
PpuMI	RGGWCCY	3 cut(s)	627, 2210, 2282
Psp5II	RGGWCCY	3 cut(s)	627, 2210, 2282
Psp6I	CCWGG	6 cut(s)	969, 1052, 1152, 1258, 1606, 1688
PspCI	CACGTG	1 cut(s)	932
PspEI	GGTNACC	1 cut(s)	1148
PspGI	CCWGG	6 cut(s)	969, 1052, 1152, 1258, 1606, 1688
PspN4I	GGNNCC	5 cut(s)	135, 1378, 1687, 2211, 2283
PspPPI	RGGWCCY	3 cut(s)	627, 2210, 2282
PstNI	CAGNNNCTG	1 cut(s)	1775
PsuI	RGATCY	2 cut(s)	772, 2120
PsyI	GACNNNGTC	1 cut(s)	349
RsaI	GTAC	2 cut(s)	679, 1212
RsaNI	GTAC	2 cut(s)	678, 1211
RseI	CAYNNNNRTG	2 cut(s)	732, 869
SacII	CCGCGG	1 cut(s)	132
SaqAI	TTAA	6 cut(s)	93, 594, 713, 1062, 1461, 2253
SatI	GCNGC	7 cut(s)	446, 824, 995, 1101, 1482, 1858, 2237
SchI	GAGTC	2 cut(s)	4, 1088
ScrFI	CCNGG	8 cut(s)	275, 349, 971, 1054, 1154, 1260, 1608, 1690
SduI	GDGCHC	2 cut(s)	405, 896
SexAI	ACCWGGT	1 cut(s)	1606
SfaNI	GCATC	6 cut(s)	304, 532, 659, 1231, 1336, 2182
SfiI	GGCCNNNNNGGCC	1 cut(s)	1857
Sfr303I	CCGCGG	1 cut(s)	132
SgrBI	CCGCGG	1 cut(s)	132
SinI	GGWCC	7 cut(s)	133, 607, 627, 1377, 1610, 2210, 2282
SmiMI	CAYNNNNRTG	2 cut(s)	732, 869
SmlI	CTYRAG	1 cut(s)	1158
SmoI	CTYRAG	1 cut(s)	1158
SseBI	AGGCCT	1 cut(s)	1819
SsiI	CCGC	5 cut(s)	129, 131, 156, 533, 1857
SspMI	CTAG	7 cut(s)	1005, 1560, 1578, 1670, 1821, 2049, 2214
StuI	AGGCCT	1 cut(s)	1819
StyD4I	CCNGG	8 cut(s)	273, 347, 969, 1052, 1152, 1258, 1606, 1688
StyI	CCWWGG	3 cut(s)	1004, 1214, 2213
TaaI	ACNGT	2 cut(s)	1181, 2045
TaiI	ACGT	2 cut(s)	934, 1474
TaqII	GACCGA	1 cut(s)	624
TauI	GCSGC	1 cut(s)	1860
Tru1I	TTAA	6 cut(s)	93, 594, 713, 1062, 1461, 2253
Tru9I	TTAA	6 cut(s)	93, 594, 713, 1062, 1461, 2253
TscAI	CASTG	1 cut(s)	1131
TseI	GCWGC	6 cut(s)	445, 823, 994, 1100, 1481, 2236
TspGWI	ACGGA	1 cut(s)	695
TspRI	CASTG	1 cut(s)	1131
Tth111I	GACNNNGTC	1 cut(s)	349
VneI	GTGCAC	1 cut(s)	401
VpaK11BI	GGWCC	7 cut(s)	133, 607, 627, 1377, 1610, 2210, 2282
XapI	RAATTY	4 cut(s)	1057, 1138, 2201, 2291
XbaI	TCTAGA	2 cut(s)	1577, 1669
XmaJI	CCTAGG	2 cut(s)	1004, 2213
XmnI	GAANNNNTTC	1 cut(s)	2087
XspI	CTAG	7 cut(s)	1005, 1560, 1578, 1670, 1821, 2049, 2214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.