Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006072

Physical Location & Seq

Genomic Coordinates Reverse (-)

28535189 .. 28539712

Gene Structure 4524 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G323900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2772 bp

ATGGAAATGAAGCCCAAATTAGTCATTTTCTTCTTCCACTGTACGCCCGTTATAGGTTTAAGCACCTTCGTCGTCCAACTCCTCTCTCCCCCTCTCATCCATGGAGGGTTTAACACCATAGTTGAAAACTCTCTCTACCTCTCTGACTCTTTTCCGGAAATGGCACAAACTCCACACTCACTGCTCCTACTCAAACGCCTTTCTCGCTGTTCTCCGAACCTTAAACCCCCTTCAGCTTTCCTCTCTCTCCTAAAACCCTTCTCAACCTCACCAACCCCAATCTCCTCCTTAGAGCCAAAACCTTCCTCTCTCTCAGCACGATTGAGTTTCGTCTTCGACCAAATTGACGCCATTGAGAAAGAACGCTCCGAGAAGGATCAAACCCTTCAAAAAATCCGAGCTTGGCGCGAATCCAAAAAATCCCAAAATAACCCAGAATTAGGGTTGGGAGTTGTCAGTGACAGCGTAAATAATGCTAAGTTGATTAGTTCTGACTCAGTTTCGTCCGAGTCGGAGAGGTTTGAGACGCCAGTGGCAGCTAAGAAAGAGGTAGAGGTAGTGCACCCATGGCCGGAGTGGATTGAACTAATGGAGAGGCTGGTGCAGCAGAACTACTTTGATCATAGGAGAAACGATGAGGATAGAATGATCCAAGATATCGGCTTTAATGCATCTGAAGCTGTTTTGGCGGCAGAGGAAGATGCCCAGGGTGTTGATTTCAAGGATTTCAAGACTGTTCAAACAGCATGTCTTAATTTCGGGAAGGACCGGTTCGATATTATGAGGTCCTTGTCGAGACAGGATATTCAAGTTTTGGTGGGTTTTGGCTGCCCGAGTACGGACAAGAAGGTGGTTTTCTCTTCAAAACTGTTGAGGAAGCATACCCACCTTGATGAAGGAGATGTTTGCAGTTCCTGCAGTTTAAGAAATTCCTGCGAAAGAGCATATCTGATTACTAACAAAGAGGACGAGGCACGTACTATTGATATAATGCGTGTTTTATTGGCTTATGGATTTGATCCTGTAAATGGATCAGTAGTCAATAAGTCACTTCTGAAACAAAAGTCTGTTAAGACTGTAGTCCGTAAGTTACTTCATCAGGTTGTCAAGTTGAGTTCAGTTCCAATAGATCCTAATCTTCCACCTCCAGTAATCAAAAAGCCACCCCCAAAAGTAAAGCAGCCTCCTCCCCCTCCAAGAAGGCGAGTTGGACGAGATGACATTGAGATGAAAAAAGGGGACTGGCTATGCTCTAAGTGTGACTTCATGAATTTTGCCAAGAACACCATCTGCCTGCAATGTGATGCCAAACGTCCAAAGAGACAACTGCTTCCAGGAGAATGGGAATGCCCTGGGTGCAACTTTTTAAATTATAGGAGAAATATGGCATGCTTTCATTGTGATTGCAAGCGCCCACCGGACAAATATCTGGAGAACAAAGTGCAAGAAACGCAACGTGGCCCTAGGACAAGGGTGGAGAAGACTGCTGTTCTTCACAGGGACTCTAATGCCTGGAATTTTGATTTTGATGACAATGAGTCAGATGGGGCAGATGTTGCTGCTTTTGAATATGCAGATTCTTCAGTAATAGGTGAAGGTTCTCTTGGTAACCAGGCTCAAGGACAAAATTTTGGCCGCCCTAAAGATAGCAGAGTACCAAGGGTTCACAATGAAGAATACTCTGATGGTGATACTGTTAGGCCAGGAAGAGGGTTTGATGATTTTAATGATGAAGATGATGGTATTGACAATTACGAGTTAGACACTAACAATAAAAATTCAGCACAGAGCGGTTCAATTGATTTTTCGGAATTTGAAGGGTCCGAATCAGAAGACATTGAAGGCTCTGACAATAGTTCGTGTGGTCGTCGCAGAACAAAATCTTCTTACAATAAGCCACATAGGTCTACACGTCAACAGGCAGCGTTCTCTGTCACAGATGATGGTGAACTTGTTTCTGACAAAGAGCTTTCAGCCCATCCCAACTGGAAGTCTAGTCATGTTGCTGATTCTAGATCAAGAGGTAGGGGTAGAAATACAACTGGTCCATCCAGGGGATTAAGCTTTGGTTCTGATGATGAACTTGGACTGTCTTCTGATGTAGATGATGTAGATCAAACTTTTGGATCCAGGCAAGGTAAATTGAATAAATTAGGTTCTGGGAGAAGAGATTTTCAGAGGAGAGGAAATTTTGATGTTGAAGATGATTCAGTTTCTGGTTCAGAATCAGACAATGATGATTTTCAATCCAATAAAAATAGACTGAGAAGGCCTAAAGAAAACAATTTCAAAGGTCGGGGCAGCCATAACTTTACCAGAGACACACAATTTGAATCCAGTGGAATGAAGGGTGGTAGGAGAAATTCTTTCAACAATGACTTTGACAGATCAGCACGAGGGTCTCATGGTAGTAATAAAGGATTTCGAGGGAATGATTTTGACAGCCAGAGAATGAGTAACAGAGGTGGTGATAAGCAGAGTTTTAAGGGGGGTCCTAGAAGAGAAGGGTTTGGAAAGAGTGGTGGGAGGAATTCTTTCAGTGATGATTTTGATAGATCAGCAGGAGGGTCTCGCGGTAATAACAAAGGATTTCGGGGGAACGATTTTGATGGGCAGAGAAGGAGTAACAGAGGGGCTGATGCACATAATTTTAAGGGGCCTAGAAGAGAAGGATTTGGAAAGCAGCAGCGTGGAGGGGTTAATGAATATGGTAGGGACAAGGACAGGGGCTTTGATGACTGTAGAAACAGTAGACGCGTAATTGAAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RanBP

Protein Analysis

924

Amino Acids

103.67

Weight (kDa)

8.54

Isoelectric Point (pI)

49.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006072)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55040
fragaria_vesca	FvH4_6g06160
malus_domestica	MD04G1203800.v1.1 MD12G1217600.v1.1
prunus_persica	Prupe.6G323900_v2.0.a1 Prupe.6G323900_v2.0.a1
pyrus_communis	pycom04g18030 pycom12g20320
rosa_chinensis	RchiOBHm_Chr1g0324471 RchiOBHm_Chr3g0455171
rosa_laevigata	RLG00000025382 RLG00000030198
rosa_multiflora	Rmu_sc0002169.1_g000027 Rmu_sc0002502.1_g000001 Rmu_sc0013000.1_g000010
rosa_roxburghii	Rroxscaffold_4G00325480 Rroxscaffold_6G00424520
rosa_rugosa	Rorug01G0046100 Rorug03G0004100 Rorug03G0004200
rosa_samantha	Rh1AG061900 Rh3AG065000 Rh3BG067100 Rh3CG065500 Rh3DG067000
rosa_wichuraiana	Rw1G005240 Rw3G005100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1791
AccI	GTMKAC	2 cut(s)	1907, 2752
AccII	CGCG	3 cut(s)	408, 2574, 2757
AccIII	TCCGGA	1 cut(s)	154
AciI	CCGC	4 cut(s)	689, 1636, 1791, 2574
AclWI	GGATC	7 cut(s)	384, 643, 1013, 1039, 1124, 2121, 2134
AcoI	YGGCCR	2 cut(s)	569, 1633
AcsI	RAATTY	9 cut(s)	928, 1270, 1516, 1627, 1777, 1811, 2188, 2362, 2530
AcuI	CTGAAG	3 cut(s)	216, 696, 1566
AcyI	GRCGYC	2 cut(s)	348, 527
AfaI	GTAC	4 cut(s)	43, 838, 979, 1656
AfiI	CCNNNNNNNGG	7 cut(s)	53, 440, 571, 838, 1028, 1709, 2054
AflIII	ACRYGT	2 cut(s)	1910, 2755
AgeI	ACCGGT	1 cut(s)	768
AhdI	GACNNNNNGTC	1 cut(s)	1537
AjiI	CACGTC	1 cut(s)	1913
AjnI	CCWGG	8 cut(s)	705, 1333, 1351, 1511, 1611, 1702, 2051, 2129
AjuI	GAANNNNNNNTTGG	2 cut(s)	1587, 1619
AluBI	AGCT	6 cut(s)	236, 401, 539, 680, 1969, 2064
AluI	AGCT	6 cut(s)	236, 401, 539, 680, 1969, 2064
Alw21I	GWGCWC	1 cut(s)	564
Alw26I	GTCTC	6 cut(s)	518, 790, 1315, 2313, 2406, 2574
Alw44I	GTGCAC	1 cut(s)	560
AlwI	GGATC	7 cut(s)	384, 643, 1013, 1039, 1124, 2121, 2134
AlwNI	CAGNNNCTG	2 cut(s)	915, 2216
Ama87I	CYCGRG	1 cut(s)	832
Aor13HI	TCCGGA	1 cut(s)	154
AoxI	GGCC	6 cut(s)	569, 1459, 1633, 1700, 2270, 2657
ApaLI	GTGCAC	1 cut(s)	560
ApeKI	GCWGC	9 cut(s)	536, 604, 828, 1180, 1559, 1922, 2301, 2683, 2686
ApoI	RAATTY	9 cut(s)	928, 1270, 1516, 1627, 1777, 1811, 2188, 2362, 2530
ArsI	GACNNNNNNTTYG	6 cut(s)	733, 765, 2312, 2344, 2714, 2746
AsiGI	ACCGGT	1 cut(s)	768
Asp700I	GAANNNNTTC	1 cut(s)	2534
AspA2I	CCTAGG	1 cut(s)	1463
AspLEI	GCGC	2 cut(s)	408, 1413
AspS9I	GGNCC	7 cut(s)	766, 786, 1460, 1821, 2045, 2492, 2657
AsuHPI	GGTGA	5 cut(s)	261, 1604, 1700, 1958, 2480
AvaI	CYCGRG	1 cut(s)	832
AvaII	GGWCC	5 cut(s)	766, 786, 1821, 2045, 2492
AvrII	CCTAGG	1 cut(s)	1463
BaeGI	GKGCMC	1 cut(s)	564
BamHI	GGATCC	1 cut(s)	2126
BauI	CACGAG	1 cut(s)	2394
BbsI	GAAGAC	4 cut(s)	325, 1487, 1839, 2085
Bbv12I	GWGCWC	1 cut(s)	564
BbvI	GCAGC	9 cut(s)	548, 616, 815, 1192, 1546, 1934, 2313, 2695, 2698
BccI	CCATC	8 cut(s)	1295, 1538, 1679, 1733, 1937, 1986, 2056, 2603
BcgI	CGANNNNNNTGC	2 cut(s)	52, 86
BciT130I	CCWGG	8 cut(s)	707, 1335, 1353, 1513, 1613, 1704, 2053, 2131
BclI	TGATCA	1 cut(s)	619
BcoDI	GTCTC	6 cut(s)	518, 790, 1315, 2313, 2406, 2574
BfaI	CTAG	5 cut(s)	1464, 1995, 2013, 2496, 2661
BfmI	CTRYAG	3 cut(s)	916, 1077, 2740
BfoI	RGCGCY	1 cut(s)	1414
BlnI	CCTAGG	1 cut(s)	1463
Bme1390I	CCNGG	8 cut(s)	707, 1335, 1353, 1513, 1613, 1704, 2053, 2131
Bme18I	GGWCC	5 cut(s)	766, 786, 1821, 2045, 2492
BmeRI	GACNNNNNGTC	1 cut(s)	1537
BmeT110I	CYCGRG	1 cut(s)	832
BmgBI	CACGTC	1 cut(s)	1913
BmgT120I	GGNCC	7 cut(s)	766, 786, 1460, 1821, 2045, 2492, 2657
BmiI	GGNNCC	4 cut(s)	1822, 2128, 2493, 2658
BmrFI	CCNGG	8 cut(s)	707, 1335, 1353, 1513, 1613, 1704, 2053, 2131
BmsI	GCATC	4 cut(s)	680, 691, 1294, 2629
BoxI	GACNNNNGTC	1 cut(s)	1079
BpiI	GAAGAC	4 cut(s)	325, 1487, 1839, 2085
BpmI	CTGGAG	2 cut(s)	1131, 1451
BpuEI	CTTGAG	1 cut(s)	1602
BsaAI	YACGTR	1 cut(s)	977
BsaBI	GATNNNNATC	2 cut(s)	1134, 2112
BsaHI	GRCGYC	2 cut(s)	348, 527
BsaI	GGTCTC	2 cut(s)	2406, 2574
BsaJI	CCNNGG	9 cut(s)	100, 566, 705, 706, 1351, 1352, 1463, 1658, 2052
BsaWI	WCCGGW	3 cut(s)	154, 768, 1417
Bsc4I	CCNNNNNNNGG	7 cut(s)	53, 440, 571, 838, 1028, 1709, 2054
Bse118I	RCCGGY	1 cut(s)	768
Bse1I	ACTGG	6 cut(s)	530, 1148, 1247, 1991, 2047, 2337
Bse3DI	GCAATG	1 cut(s)	1304
Bse8I	GATNNNNATC	2 cut(s)	1134, 2112
BseAI	TCCGGA	1 cut(s)	154
BseBI	CCWGG	8 cut(s)	707, 1335, 1353, 1513, 1613, 1704, 2053, 2131
BseDI	CCNNGG	9 cut(s)	100, 566, 705, 706, 1351, 1352, 1463, 1658, 2052
BseGI	GGATG	3 cut(s)	96, 1978, 2048
BseJI	GATNNNNATC	2 cut(s)	1134, 2112
BseLI	CCNNNNNNNGG	7 cut(s)	53, 440, 571, 838, 1028, 1709, 2054
BseMI	GCAATG	1 cut(s)	1304
BseMII	CTCAG	3 cut(s)	327, 510, 2255
BseNI	ACTGG	6 cut(s)	530, 1148, 1247, 1991, 2047, 2337
BseRI	GAGGAG	4 cut(s)	71, 274, 1176, 2194
BseSI	GKGCMC	1 cut(s)	564
BseXI	GCAGC	9 cut(s)	548, 616, 815, 1192, 1546, 1934, 2313, 2695, 2698
BsgI	GTGCAG	1 cut(s)	623
Bsh1236I	CGCG	3 cut(s)	408, 2574, 2757
BshFI	GGCC	6 cut(s)	571, 1461, 1635, 1702, 2272, 2659
BshTI	ACCGGT	1 cut(s)	768
BsiHKAI	GWGCWC	1 cut(s)	564
BsiHKCI	CYCGRG	1 cut(s)	832
BsiSI	CCGG	4 cut(s)	155, 572, 769, 1418
BslFI	GGGAC	3 cut(s)	1253, 1514, 2729
BslI	CCNNNNNNNGG	7 cut(s)	53, 440, 571, 838, 1028, 1709, 2054
BsmAI	GTCTC	6 cut(s)	518, 790, 1315, 2313, 2406, 2574
BsmBI	CGTCTC	1 cut(s)	518
BsmFI	GGGAC	3 cut(s)	1253, 1514, 2729
BsmI	GAATGC	1 cut(s)	1352
BsnI	GGCC	6 cut(s)	571, 1461, 1635, 1702, 2272, 2659
Bso31I	GGTCTC	2 cut(s)	2406, 2574
BsoBI	CYCGRG	1 cut(s)	832
Bsp1286I	GDGCHC	1 cut(s)	564
Bsp13I	TCCGGA	1 cut(s)	154
Bsp19I	CCATGG	2 cut(s)	100, 566
BspACI	CCGC	4 cut(s)	689, 1636, 1791, 2574
BspANI	GGCC	6 cut(s)	571, 1461, 1635, 1702, 2272, 2659
BspCNI	CTCAG	3 cut(s)	326, 509, 2256
BspEI	TCCGGA	1 cut(s)	154
BspFNI	CGCG	3 cut(s)	408, 2574, 2757
BspHI	TCATGA	1 cut(s)	1266
BspLI	GGNNCC	4 cut(s)	1822, 2128, 2493, 2658
BspMAI	CTGCAG	1 cut(s)	920
BspPI	GGATC	7 cut(s)	384, 643, 1013, 1039, 1124, 2121, 2134
BspTNI	GGTCTC	2 cut(s)	2406, 2574
BsrBI	CCGCTC	1 cut(s)	1791
BsrDI	GCAATG	1 cut(s)	1304
BsrFI	RCCGGY	1 cut(s)	768
BsrI	ACTGG	6 cut(s)	530, 1148, 1247, 1991, 2047, 2337
BssAI	RCCGGY	1 cut(s)	768
BssECI	CCNNGG	9 cut(s)	100, 566, 705, 706, 1351, 1352, 1463, 1658, 2052
BssNI	GRCGYC	2 cut(s)	348, 527
BssSI	CACGAG	1 cut(s)	2394
BssT1I	CCWWGG	4 cut(s)	100, 566, 1463, 1658
Bst2BI	CACGAG	1 cut(s)	2394
Bst2UI	CCWGG	8 cut(s)	707, 1335, 1353, 1513, 1613, 1704, 2053, 2131
Bst4CI	ACNGT	8 cut(s)	41, 736, 870, 1078, 1696, 2091, 2741, 2750
Bst6I	CTCTTC	5 cut(s)	865, 1702, 2161, 2494, 2659
BstACI	GRCGYC	2 cut(s)	348, 527
BstAPI	GCANNNNNTGC	2 cut(s)	915, 1556
BstBAI	YACGTR	1 cut(s)	977
BstC8I	GCNNGC	3 cut(s)	1295, 1390, 1409
BstDEI	CTNAG	7 cut(s)	289, 313, 477, 496, 540, 1254, 2264
BstDSI	CCRYGG	2 cut(s)	100, 566
BstEII	GGTNACC	1 cut(s)	1607
BstF5I	GGATG	3 cut(s)	96, 1978, 2048
BstFNI	CGCG	3 cut(s)	408, 2574, 2757
BstH2I	RGCGCY	1 cut(s)	1414
BstHHI	GCGC	2 cut(s)	408, 1413
BstMAI	GTCTC	6 cut(s)	518, 790, 1315, 2313, 2406, 2574
BstMWI	GCNNNNNNNGC	9 cut(s)	204, 568, 604, 677, 686, 915, 1356, 1450, 1556
BstNI	CCWGG	8 cut(s)	707, 1335, 1353, 1513, 1613, 1704, 2053, 2131
BstNSI	RCATGY	2 cut(s)	750, 1392
BstPAI	GACNNNNGTC	1 cut(s)	1079
BstPI	GGTNACC	1 cut(s)	1607
BstSCI	CCNGG	8 cut(s)	705, 1333, 1351, 1511, 1611, 1702, 2051, 2129
BstSFI	CTRYAG	3 cut(s)	916, 1077, 2740
BstSLI	GKGCMC	1 cut(s)	564
BstUI	CGCG	3 cut(s)	408, 2574, 2757
BstV1I	GCAGC	9 cut(s)	548, 616, 815, 1192, 1546, 1934, 2313, 2695, 2698
BstV2I	GAAGAC	4 cut(s)	325, 1487, 1839, 2085
BstX2I	RGATCY	2 cut(s)	1129, 2126
BstXI	CCANNNNNNTGG	1 cut(s)	1341
BstYI	RGATCY	2 cut(s)	1129, 2126
BsuRI	GGCC	6 cut(s)	571, 1461, 1635, 1702, 2272, 2659
BtgI	CCRYGG	2 cut(s)	100, 566
BtrI	CACGTC	1 cut(s)	1913
BtsCI	GGATG	3 cut(s)	96, 1978, 2048
BtsI	GCAGTG	1 cut(s)	179
BtsIMutI	CAGTG	6 cut(s)	37, 179, 463, 537, 2344, 2545
Cac8I	GCNNGC	3 cut(s)	1295, 1390, 1409
CaiI	CAGNNNCTG	2 cut(s)	915, 2216
CciI	TCATGA	1 cut(s)	1266
CfoI	GCGC	2 cut(s)	408, 1413
Cfr10I	RCCGGY	1 cut(s)	768
Cfr13I	GGNCC	7 cut(s)	766, 786, 1460, 1821, 2045, 2492, 2657
CseI	GACGC	3 cut(s)	356, 535, 2763
Csp6I	GTAC	4 cut(s)	42, 837, 978, 1655
CspAI	ACCGGT	1 cut(s)	768
CviAII	CATG	7 cut(s)	101, 567, 747, 1267, 1389, 2000, 2405
CviQI	GTAC	4 cut(s)	42, 837, 978, 1655
DdeI	CTNAG	7 cut(s)	289, 313, 477, 496, 540, 1254, 2264
DraI	TTTAAA	1 cut(s)	1368
DriI	GACNNNNNGTC	1 cut(s)	1537
EaeI	YGGCCR	2 cut(s)	569, 1633
Eam1104I	CTCTTC	5 cut(s)	865, 1702, 2161, 2494, 2659
Eam1105I	GACNNNNNGTC	1 cut(s)	1537
EarI	CTCTTC	5 cut(s)	865, 1702, 2161, 2494, 2659
Eco130I	CCWWGG	4 cut(s)	100, 566, 1463, 1658
Eco147I	AGGCCT	1 cut(s)	2272
Eco31I	GGTCTC	2 cut(s)	2406, 2574
Eco32I	GATATC	1 cut(s)	658
Eco47I	GGWCC	5 cut(s)	766, 786, 1821, 2045, 2492
Eco57I	CTGAAG	3 cut(s)	216, 696, 1566
Eco88I	CYCGRG	1 cut(s)	832
Eco91I	GGTNACC	1 cut(s)	1607
EcoO109I	RGGNCCY	3 cut(s)	786, 2492, 2657
EcoO65I	GGTNACC	1 cut(s)	1607
EcoRI	GAATTC	1 cut(s)	2530
EcoRII	CCWGG	8 cut(s)	705, 1333, 1351, 1511, 1611, 1702, 2051, 2129
EcoRV	GATATC	1 cut(s)	658
EcoT14I	CCWWGG	4 cut(s)	100, 566, 1463, 1658
EcoT22I	ATGCAT	1 cut(s)	673
ErhI	CCWWGG	4 cut(s)	100, 566, 1463, 1658
Esp3I	CGTCTC	1 cut(s)	518
FaeI	CATG	7 cut(s)	104, 570, 750, 1270, 1392, 2003, 2408
FalI	AAGNNNNNCTT	4 cut(s)	1247, 1279, 1587, 1619
FaqI	GGGAC	3 cut(s)	1253, 1514, 2729
FatI	CATG	7 cut(s)	100, 566, 746, 1266, 1388, 1999, 2404
FbaI	TGATCA	1 cut(s)	619
FblI	GTMKAC	2 cut(s)	1907, 2752
FokI	GGATG	3 cut(s)	83, 1965, 2035
FspBI	CTAG	5 cut(s)	1464, 1995, 2013, 2496, 2661
GlaI	GCGC	2 cut(s)	407, 1412
GsuI	CTGGAG	2 cut(s)	1131, 1451
HaeII	RGCGCY	1 cut(s)	1414
HaeIII	GGCC	6 cut(s)	571, 1461, 1635, 1702, 2272, 2659
HapII	CCGG	4 cut(s)	155, 572, 769, 1418
HgaI	GACGC	3 cut(s)	356, 535, 2763
HhaI	GCGC	2 cut(s)	408, 1413
Hin1I	GRCGYC	2 cut(s)	348, 527
Hin1II	CATG	7 cut(s)	104, 570, 750, 1270, 1392, 2003, 2408
Hin6I	GCGC	2 cut(s)	406, 1411
HinP1I	GCGC	2 cut(s)	406, 1411
HincII	GTYRAC	1 cut(s)	1916
HindII	GTYRAC	1 cut(s)	1916
HindIII	AAGCTT	1 cut(s)	2062
HpaII	CCGG	4 cut(s)	155, 572, 769, 1418
HphI	GGTGA	5 cut(s)	261, 1604, 1700, 1958, 2480
Hpy166II	GTNNAC	6 cut(s)	562, 1666, 1908, 1916, 1949, 2753
Hpy188III	TCNNGA	8 cut(s)	155, 730, 760, 795, 1267, 1430, 2013, 2019
Hpy8I	GTNNAC	6 cut(s)	562, 1666, 1908, 1916, 1949, 2753
Hpy99I	CGWCG	2 cut(s)	74, 1872
HpyCH4III	ACNGT	8 cut(s)	41, 736, 870, 1078, 1696, 2091, 2741, 2750
HpyCH4IV	ACGT	4 cut(s)	976, 1312, 1456, 1912
HpyF10VI	GCNNNNNNNGC	9 cut(s)	204, 568, 604, 677, 686, 915, 1356, 1450, 1556
HpyF3I	CTNAG	7 cut(s)	289, 313, 477, 496, 540, 1254, 2264
HpySE526I	ACGT	4 cut(s)	976, 1312, 1456, 1912
Hsp92I	GRCGYC	2 cut(s)	348, 527
Hsp92II	CATG	7 cut(s)	104, 570, 750, 1270, 1392, 2003, 2408
HspAI	GCGC	2 cut(s)	406, 1411
Kpn2I	TCCGGA	1 cut(s)	154
Ksp22I	TGATCA	1 cut(s)	619
LmnI	GCTCC	2 cut(s)	189, 371
Lsp1109I	GCAGC	9 cut(s)	548, 616, 815, 1192, 1546, 1934, 2313, 2695, 2698
LweI	GCATC	4 cut(s)	680, 691, 1294, 2629
MaeI	CTAG	5 cut(s)	1464, 1995, 2013, 2496, 2661
MaeII	ACGT	4 cut(s)	976, 1312, 1456, 1912
MaeIII	GTNAC	8 cut(s)	458, 1047, 1089, 1259, 1607, 1933, 2456, 2624
MbiI	CCGCTC	1 cut(s)	1791
MfeI	CAATTG	1 cut(s)	1797
MflI	RGATCY	2 cut(s)	1129, 2126
MhlI	GDGCHC	1 cut(s)	564
MluI	ACGCGT	1 cut(s)	2755
MlyI	GAGTC	5 cut(s)	140, 488, 518, 1496, 1547
MmeI	TCCRAC	3 cut(s)	100, 492, 1189
Mph1103I	ATGCAT	1 cut(s)	673
MroI	TCCGGA	1 cut(s)	154
MroXI	GAANNNNTTC	1 cut(s)	2534
MslI	CAYNNNNRTG	2 cut(s)	891, 1226
MspI	CCGG	4 cut(s)	155, 572, 769, 1418
MspR9I	CCNGG	8 cut(s)	707, 1335, 1353, 1513, 1613, 1704, 2053, 2131
MunI	CAATTG	1 cut(s)	1797
Mva1269I	GAATGC	1 cut(s)	1352
MvaI	CCWGG	8 cut(s)	707, 1335, 1353, 1513, 1613, 1704, 2053, 2131
MvnI	CGCG	3 cut(s)	408, 2574, 2757
MwoI	GCNNNNNNNGC	9 cut(s)	204, 568, 604, 677, 686, 915, 1356, 1450, 1556
NcoI	CCATGG	2 cut(s)	100, 566
NlaIII	CATG	7 cut(s)	104, 570, 750, 1270, 1392, 2003, 2408
NlaIV	GGNNCC	4 cut(s)	1822, 2128, 2493, 2658
NmuCI	GTSAC	4 cut(s)	458, 1047, 1259, 1933
NsiI	ATGCAT	1 cut(s)	673
NspI	RCATGY	2 cut(s)	750, 1392
PaeI	GCATGC	1 cut(s)	1392
PagI	TCATGA	1 cut(s)	1266
PasI	CCCWGGG	2 cut(s)	706, 1352
PceI	AGGCCT	1 cut(s)	2272
PctI	GAATGC	1 cut(s)	1352
PdmI	GAANNNNTTC	1 cut(s)	2534
PfeI	GAWTC	7 cut(s)	410, 1577, 1826, 2009, 2207, 2225, 2333
PfoI	TCCNGGA	1 cut(s)	1333
PinAI	ACCGGT	1 cut(s)	768
PleI	GAGTC	5 cut(s)	140, 488, 517, 1496, 1546
PpsI	GAGTC	5 cut(s)	140, 488, 517, 1496, 1546
Ppu21I	YACGTR	1 cut(s)	977
PpuMI	RGGWCCY	2 cut(s)	786, 2492
PshAI	GACNNNNGTC	1 cut(s)	1079
Psp5II	RGGWCCY	2 cut(s)	786, 2492
Psp6I	CCWGG	8 cut(s)	705, 1333, 1351, 1511, 1611, 1702, 2051, 2129
PspEI	GGTNACC	1 cut(s)	1607
PspGI	CCWGG	8 cut(s)	705, 1333, 1351, 1511, 1611, 1702, 2051, 2129
PspN4I	GGNNCC	4 cut(s)	1822, 2128, 2493, 2658
PspPI	GGNCC	7 cut(s)	766, 786, 1460, 1821, 2045, 2492, 2657
PspPPI	RGGWCCY	2 cut(s)	786, 2492
PsrI	GAACNNNNNNTAC	2 cut(s)	1647, 1679
PstI	CTGCAG	1 cut(s)	920
PstNI	CAGNNNCTG	2 cut(s)	915, 2216
PsuI	RGATCY	2 cut(s)	1129, 2126
RsaI	GTAC	4 cut(s)	43, 838, 979, 1656
RsaNI	GTAC	4 cut(s)	42, 837, 978, 1655
RseI	CAYNNNNRTG	2 cut(s)	891, 1226
Sau96I	GGNCC	7 cut(s)	766, 786, 1460, 1821, 2045, 2492, 2657
SchI	GAGTC	5 cut(s)	140, 488, 518, 1496, 1547
ScrFI	CCNGG	8 cut(s)	707, 1335, 1353, 1513, 1613, 1704, 2053, 2131
SduI	GDGCHC	1 cut(s)	564
SfaNI	GCATC	4 cut(s)	680, 691, 1294, 2629
SfcI	CTRYAG	3 cut(s)	916, 1077, 2740
SinI	GGWCC	5 cut(s)	766, 786, 1821, 2045, 2492
SmiMI	CAYNNNNRTG	2 cut(s)	891, 1226
SmlI	CTYRAG	1 cut(s)	1617
SmoI	CTYRAG	1 cut(s)	1617
SphI	GCATGC	1 cut(s)	1392
SseBI	AGGCCT	1 cut(s)	2272
SsiI	CCGC	4 cut(s)	689, 1636, 1791, 2574
SspMI	CTAG	5 cut(s)	1464, 1995, 2013, 2496, 2661
StuI	AGGCCT	1 cut(s)	2272
StyD4I	CCNGG	8 cut(s)	705, 1333, 1351, 1511, 1611, 1702, 2051, 2129
StyI	CCWWGG	4 cut(s)	100, 566, 1463, 1658
TaaI	ACNGT	8 cut(s)	41, 736, 870, 1078, 1696, 2091, 2741, 2750
TaiI	ACGT	4 cut(s)	979, 1315, 1459, 1915
TaqI	TCGA	4 cut(s)	336, 774, 794, 2425
TauI	GCSGC	2 cut(s)	692, 1638
TfiI	GAWTC	7 cut(s)	410, 1577, 1826, 2009, 2207, 2225, 2333
TscAI	CASTG	6 cut(s)	44, 186, 463, 537, 2344, 2545
TseFI	GTSAC	4 cut(s)	458, 1047, 1259, 1933
TseI	GCWGC	9 cut(s)	536, 604, 828, 1180, 1559, 1922, 2301, 2683, 2686
Tsp45I	GTSAC	4 cut(s)	458, 1047, 1259, 1933
TspGWI	ACGGA	2 cut(s)	854, 1073
TspRI	CASTG	6 cut(s)	44, 186, 463, 537, 2344, 2545
VneI	GTGCAC	1 cut(s)	560
VpaK11BI	GGWCC	5 cut(s)	766, 786, 1821, 2045, 2492
XapI	RAATTY	9 cut(s)	928, 1270, 1516, 1627, 1777, 1811, 2188, 2362, 2530
XbaI	TCTAGA	1 cut(s)	2012
XceI	RCATGY	2 cut(s)	750, 1392
XcmI	CCANNNNNNNNNTGG	1 cut(s)	573
XmaJI	CCTAGG	1 cut(s)	1463
XmiI	GTMKAC	2 cut(s)	1907, 2752
XmnI	GAANNNNTTC	1 cut(s)	2534
XspI	CTAG	5 cut(s)	1464, 1995, 2013, 2496, 2661
Zsp2I	ATGCAT	1 cut(s)	673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.