Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0006072

Physical Location & Seq

Genomic Coordinates Reverse (-)

29498232 .. 29502534

Gene Structure 4303 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1217600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2619 bp

ATGGCACAGACTCCATACTCCCTGCTCCTCCTCAAACGCCTCTCTCGCTGCTCCCCAAACCCTAAACGCCCTCCATCTCTCCTCTCTCTCCTAAAACCATTCTCCACCTCCCCAACCCCAACCTCCTCCTCCCCGGACCCAAAACCCTCCTCCCTCTCCGCCCGCCTGAGCTTCGTCTTCGACCAAATCGACGCCATCGAGAAAGAACGCTCCGAGAAGGATCAGACCCTCCAGAAAATCAGAGCTTGGCGCGAATCGAAAAAATCCCAAATTGACCCGGAATTAGGGTTGGGAGTTGCCAATCACAGTGGAATTGATGCTAATTTGGTTGATTCTGTATCTGTTTCGGCCGGGTCGGAGAGGCTGGAGAAGCCGGTGGCGGCTAAGAAGGAGGTGGAGGTCGTGCACCCGTGGCCGGAGTGGATTGAACTGATGGAGAGGCTGGTGCAGCAGAATTACTTTGATCATAGGAGGGTGGACGAGGACAGAATGGTCCAAGATATCGGCTTTGATCCAACTGAATATGCTTTGGCGGCTGAGGAGGATGCCCCAGGTATTGATTTCAAGGATTTCAAGGCTGTTCACACAGCGTGTCTTAATTTCGGAAAGGACCGATTCGATATCATAAGGTCCTTGTCGAGACAGGATATTCAAGTTTTGGTGGGTTTTGGATGCCCGAGTATGGACAAGAAGGTGGTTTTCTCTTCAAAACTATTAAGGAAGCATACCCACCTTGATGAAGGAGATGTTTGCAGTTCCTGTAGTTTAAGGAGTTCTTGTGAAAGAGCATATCTGATTACTAACAAAGAGGACGAGGCACGGACTATTGATGTAATGCGTGTTTTATTGACTTATGGATTTGATCCTGTTAATGGATCCGTGGCCAATAAGTCACTTCTGAAACAAAAATCTGTTAAGACCGTGGTCCGTAAGTTGCTTCATCAGGTTGTCAAGCTGAGTGCAGTTCCAATCGATCCTAATCTTCCACCTCCAGTAATCAAAAAGCCACCACCAAAAGTAAAGCAGCCTCCTCCGCCTCCAAGAAGACGAGTTGGACGGGATGACATTGAGATGAAAAAAGGGGACTGGCTATGCTCGAAGTGTGACTTCATGAATTTTGCCAAGAACAACATCTGCCTTCAATGTGATGCCAAACGTCCAAAGAGACAACTGCTTCCAGGAGAATGGGAATGCCCTGGGTGCAACTTCTTAAATTACAGGAGAAACATGGCATGTTTTCATTGTGATTGCAAGCGTCCACCAGATGAATACCTGGAGAACAAATTGCAAGAAGTGCAACGTGGCCCTAGGACAAGAATGGAGAAGACGGCTGTTCTTCATGGGGATGCTAATGCCTGGAATTTTAATTTTGATGACAATGAATCAGATGGAGCAGATGTTGCTGCTTTTGAGTATGCAGATCCTTCTGTAAGGGATGAAAATTTGAGTAACCAGGCTCAAGGACAAGATTTTGGACACCGTGAATACAATTTGAGTAAAGATAGCAGAGCACCAAGGGTAAACAATGAAGAATACTCCGATGCTGATACTATTAGGCCCGGGAGAGGGTTTGATGATTTTGATGATTTTGATGATGATGTTGACAATTACGAGTTAGACACTCGCAATAAAACTTCAGCACAGGATGCTTCAATTGATTTTTCTGAGTTTGAAGGGTCCGAATCGGAAGACATAGAAAATTCTGACAATAGCTTGCAAGGTCGTCAAAGAACAAAATCGCCATACAATAAGCCATCTAAGCCTACACGTCAAAGGGCAGCATTCTCTGTTTCGGATGATGATGAACTGGATGTAGATTTTGACAAAGAGCTTTCAGTCCATCCCAACTGGAAATCTAGTCATGTTGCTGATTCTAGATCAAGAGGCAGGGGTAGAACTACACGAGGTCCATCCAAGAGATTAAGCTTCGGTTCTGATGATGAACTTGGGCTGTCGGATGATGGTCTAGATCAAAACTTTGGAGCCAGGCGAGGTAAATCAAATAATTTGGATTCTAAGAGAAAAGGTTTTCAGAGGAGAGGAAATTTAGATTTTGAAGATGATTCAGTTTCTGGTTCAGAATCAGACAATGATTTTCAATCTCATAAAAATAGACCAAGAAGGAATAAAGAAAACAATTTCAAAGGTCGTGGCGGCCCTAACTTTACCAGAGAGACGCGATTTGAATCCAATGGAATGAAGGGTAGGAGAAACTCTTTCAACGATGATTTTGATGGATCAACACGAGGGTCTCGTAGTAATAGTAGAGGGTTTCGAGGGAATGATTTTGATGGGCCGAGAATGAGTAACAGAGGTAGTAATACACGGAGTTTCAACGGTCCTAAAAGAGAAGGATTTGGAAAGGGTGGTGGGAGGAACTCGTTCAATGATGATTTTGATAGATCAGCACGAGGATCTCGCGGCAGTAACAAAGTATTTCGGGAGAACAATTTTGATGGGCAAAGAATAAGTAACAGAGGGGCCGATACACATAAATTTAAGGGACCTAGAAGAGAAGGATTTGGAAAGCAGGAGCGTGGAAGGGTTAATGACTATGGGAGGGACAAGGACAGGGGGCCTGAAGAATTTAGAAACAGCAGACGCGTTATTGAAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RanBP

Protein Analysis

873

Amino Acids

98.88

Weight (kDa)

8.59

Isoelectric Point (pI)

47.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	359 - 387	3.2e-08	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006072)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55040
fragaria_vesca	FvH4_6g06160
malus_domestica	MD04G1203800.v1.1 MD12G1217600.v1.1
prunus_persica	Prupe.6G323900_v2.0.a1 Prupe.6G323900_v2.0.a1
pyrus_communis	pycom04g18030 pycom12g20320
rosa_chinensis	RchiOBHm_Chr1g0324471 RchiOBHm_Chr3g0455171
rosa_laevigata	RLG00000025382 RLG00000030198
rosa_multiflora	Rmu_sc0002169.1_g000027 Rmu_sc0002502.1_g000001 Rmu_sc0013000.1_g000010
rosa_roxburghii	Rroxscaffold_4G00325480 Rroxscaffold_6G00424520
rosa_rugosa	Rorug01G0046100 Rorug03G0004100 Rorug03G0004200
rosa_samantha	Rh1AG061900 Rh3AG065000 Rh3BG067100 Rh3CG065500 Rh3DG067000
rosa_wichuraiana	Rw1G005240 Rw3G005100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	491
AccII	CGCG	4 cut(s)	252, 2179, 2421, 2604
AciI	CCGC	7 cut(s)	159, 163, 380, 533, 1034, 2154, 2421
AclWI	GGATC	9 cut(s)	228, 506, 857, 870, 883, 968, 1415, 2245, 2422
AcoI	YGGCCR	3 cut(s)	348, 413, 882
AcsI	RAATTY	7 cut(s)	1114, 1360, 1441, 1699, 2044, 2495, 2585
AcuI	CTGAAG	2 cut(s)	1620, 2601
AcyI	GRCGYC	1 cut(s)	192
AdeI	CACNNNGTG	1 cut(s)	591
AfiI	CCNNNNNNNGG	6 cut(s)	284, 415, 682, 872, 1565, 1566
AflIII	ACRYGT	2 cut(s)	1766, 2602
AjiI	CACGTC	1 cut(s)	1769
AjnI	CCWGG	7 cut(s)	550, 1177, 1195, 1272, 1355, 1452, 1985
AluBI	AGCT	6 cut(s)	171, 245, 955, 1713, 1831, 1926
AluI	AGCT	6 cut(s)	171, 245, 955, 1713, 1831, 1926
Alw21I	GWGCWC	2 cut(s)	408, 1513
Alw26I	GTCTC	4 cut(s)	634, 1159, 2168, 2256
Alw44I	GTGCAC	1 cut(s)	404
AlwI	GGATC	9 cut(s)	228, 506, 857, 870, 883, 968, 1415, 2245, 2422
AlwNI	CAGNNNCTG	2 cut(s)	759, 2072
Ama87I	CYCGRG	2 cut(s)	676, 1559
AoxI	GGCC	9 cut(s)	348, 413, 882, 1303, 1556, 2155, 2294, 2481, 2576
ApaLI	GTGCAC	1 cut(s)	404
ApeKI	GCWGC	5 cut(s)	48, 448, 1024, 1403, 1778
ApoI	RAATTY	7 cut(s)	1114, 1360, 1441, 1699, 2044, 2495, 2585
Asp700I	GAANNNNTTC	1 cut(s)	2381
AspA2I	CCTAGG	1 cut(s)	1307
AspLEI	GCGC	1 cut(s)	252
AsuC2I	CCSGG	5 cut(s)	134, 278, 352, 1560, 1561
AvaI	CYCGRG	2 cut(s)	676, 1559
AvaII	GGWCC	9 cut(s)	136, 493, 610, 630, 925, 1677, 1907, 2339, 2504
AvrII	CCTAGG	1 cut(s)	1307
BaeGI	GKGCMC	1 cut(s)	408
BalI	TGGCCA	1 cut(s)	884
BamHI	GGATCC	1 cut(s)	875
BauI	CACGAG	3 cut(s)	1902, 2244, 2409
BbsI	GAAGAC	4 cut(s)	169, 1051, 1331, 1695
Bbv12I	GWGCWC	2 cut(s)	408, 1513
BbvCI	CCTCAGC	1 cut(s)	537
BbvI	GCAGC	5 cut(s)	35, 460, 1036, 1390, 1790
BceAI	ACGGC	1 cut(s)	1344
BciT130I	CCWGG	7 cut(s)	552, 1179, 1197, 1274, 1357, 1454, 1987
BclI	TGATCA	1 cut(s)	463
BcnI	CCSGG	5 cut(s)	134, 278, 352, 1560, 1561
BcoDI	GTCTC	4 cut(s)	634, 1159, 2168, 2256
BfaI	CTAG	5 cut(s)	1308, 1857, 1875, 1967, 2508
BfmI	CTRYAG	1 cut(s)	760
BisI	GCNGC	9 cut(s)	49, 381, 449, 534, 1025, 1404, 1779, 2155, 2422
BlnI	CCTAGG	1 cut(s)	1307
BlsI	GCNGC	9 cut(s)	50, 382, 450, 535, 1026, 1405, 1780, 2156, 2423
Bme18I	GGWCC	9 cut(s)	136, 493, 610, 630, 925, 1677, 1907, 2339, 2504
BmeT110I	CYCGRG	2 cut(s)	676, 1559
BmgBI	CACGTC	1 cut(s)	1769
BmiI	GGNNCC	7 cut(s)	138, 877, 1678, 1984, 2482, 2505, 2577
BmsI	GCATC	7 cut(s)	307, 535, 662, 1138, 1336, 1531, 1636
BoxI	GACNNNNGTC	1 cut(s)	923
BpiI	GAAGAC	4 cut(s)	169, 1051, 1331, 1695
BpmI	CTGGAG	4 cut(s)	215, 386, 975, 1295
Bpu10I	CCTNAGC	2 cut(s)	167, 537
BpuEI	CTTGAG	1 cut(s)	1443
BpuMI	CCSGG	5 cut(s)	134, 278, 352, 1560, 1561
Bsa29I	ATCGAT	1 cut(s)	972
BsaBI	GATNNNNATC	2 cut(s)	978, 2185
BsaHI	GRCGYC	1 cut(s)	192
BsaI	GGTCTC	1 cut(s)	2256
BsaXI	ACNNNNNCTCC	4 cut(s)	763, 793, 1383, 1413
Bsc4I	CCNNNNNNNGG	6 cut(s)	284, 415, 682, 872, 1565, 1566
Bse118I	RCCGGY	1 cut(s)	373
Bse1I	ACTGG	4 cut(s)	992, 1091, 1812, 1853
Bse8I	GATNNNNATC	2 cut(s)	978, 2185
BseBI	CCWGG	7 cut(s)	552, 1179, 1197, 1274, 1357, 1454, 1987
BseCI	ATCGAT	1 cut(s)	972
BseJI	GATNNNNATC	2 cut(s)	978, 2185
BseLI	CCNNNNNNNGG	6 cut(s)	284, 415, 682, 872, 1565, 1566
BseMII	CTCAG	4 cut(s)	158, 528, 947, 1656
BseNI	ACTGG	4 cut(s)	992, 1091, 1812, 1853
BseRI	GAGGAG	9 cut(s)	17, 20, 71, 115, 118, 139, 554, 1020, 2050
BseSI	GKGCMC	1 cut(s)	408
BseX3I	CGGCCG	1 cut(s)	348
BseXI	GCAGC	5 cut(s)	35, 460, 1036, 1390, 1790
BsgI	GTGCAG	2 cut(s)	467, 981
Bsh1236I	CGCG	4 cut(s)	252, 2179, 2421, 2604
Bsh1285I	CGRYCG	1 cut(s)	351
BshFI	GGCC	9 cut(s)	350, 415, 884, 1305, 1558, 2157, 2296, 2483, 2578
BshVI	ATCGAT	1 cut(s)	972
BsiEI	CGRYCG	1 cut(s)	351
BsiHKAI	GWGCWC	2 cut(s)	408, 1513
BsiHKCI	CYCGRG	2 cut(s)	676, 1559
BsiSI	CCGG	6 cut(s)	134, 278, 351, 374, 416, 1560
BslFI	GGGAC	3 cut(s)	1097, 2517, 2576
BslI	CCNNNNNNNGG	6 cut(s)	284, 415, 682, 872, 1565, 1566
BsmAI	GTCTC	4 cut(s)	634, 1159, 2168, 2256
BsmBI	CGTCTC	1 cut(s)	2168
BsmFI	GGGAC	3 cut(s)	1097, 2517, 2576
BsmI	GAATGC	2 cut(s)	1196, 1781
BsnI	GGCC	9 cut(s)	350, 415, 884, 1305, 1558, 2157, 2296, 2483, 2578
Bso31I	GGTCTC	1 cut(s)	2256
BsoBI	CYCGRG	2 cut(s)	676, 1559
Bsp1286I	GDGCHC	2 cut(s)	408, 1513
BspACI	CCGC	7 cut(s)	159, 163, 380, 533, 1034, 2154, 2421
BspANI	GGCC	9 cut(s)	350, 415, 884, 1305, 1558, 2157, 2296, 2483, 2578
BspCNI	CTCAG	4 cut(s)	159, 529, 948, 1657
BspDI	ATCGAT	1 cut(s)	972
BspFNI	CGCG	4 cut(s)	252, 2179, 2421, 2604
BspHI	TCATGA	1 cut(s)	1110
BspLI	GGNNCC	7 cut(s)	138, 877, 1678, 1984, 2482, 2505, 2577
BspPI	GGATC	9 cut(s)	228, 506, 857, 870, 883, 968, 1415, 2245, 2422
BspTNI	GGTCTC	1 cut(s)	2256
BsrFI	RCCGGY	1 cut(s)	373
BsrI	ACTGG	4 cut(s)	992, 1091, 1812, 1853
BssAI	RCCGGY	1 cut(s)	373
BssNI	GRCGYC	1 cut(s)	192
BssSI	CACGAG	3 cut(s)	1902, 2244, 2409
BssT1I	CCWWGG	2 cut(s)	1307, 1514
Bst2BI	CACGAG	3 cut(s)	1902, 2244, 2409
Bst2UI	CCWGG	7 cut(s)	552, 1179, 1197, 1274, 1357, 1454, 1987
Bst4CI	ACNGT	4 cut(s)	308, 922, 1481, 2339
Bst6I	CTCTTC	2 cut(s)	709, 2506
BstACI	GRCGYC	1 cut(s)	192
BstAPI	GCANNNNNTGC	3 cut(s)	1294, 1400, 1646
BstC8I	GCNNGC	3 cut(s)	163, 1253, 1715
BstDEI	CTNAG	7 cut(s)	167, 384, 537, 956, 1665, 1758, 2016
BstDSI	CCRYGG	3 cut(s)	410, 879, 921
BstFNI	CGCG	4 cut(s)	252, 2179, 2421, 2604
BstHHI	GCGC	1 cut(s)	252
BstMAI	GTCTC	4 cut(s)	634, 1159, 2168, 2256
BstMCI	CGRYCG	1 cut(s)	351
BstNI	CCWGG	7 cut(s)	552, 1179, 1197, 1274, 1357, 1454, 1987
BstNSI	RCATGY	1 cut(s)	1236
BstPAI	GACNNNNGTC	1 cut(s)	923
BstSFI	CTRYAG	1 cut(s)	760
BstSLI	GKGCMC	1 cut(s)	408
BstUI	CGCG	4 cut(s)	252, 2179, 2421, 2604
BstV1I	GCAGC	5 cut(s)	35, 460, 1036, 1390, 1790
BstV2I	GAAGAC	4 cut(s)	169, 1051, 1331, 1695
BstX2I	RGATCY	3 cut(s)	875, 1420, 2414
BstXI	CCANNNNNNTGG	1 cut(s)	1185
BstYI	RGATCY	3 cut(s)	875, 1420, 2414
BstZI	CGGCCG	1 cut(s)	348
Bsu15I	ATCGAT	1 cut(s)	972
BsuRI	GGCC	9 cut(s)	350, 415, 884, 1305, 1558, 2157, 2296, 2483, 2578
BsuTUI	ATCGAT	1 cut(s)	972
BtgI	CCRYGG	3 cut(s)	410, 879, 921
BtrI	CACGTC	1 cut(s)	1769
BtsIMutI	CAGTG	1 cut(s)	313
Cac8I	GCNNGC	3 cut(s)	163, 1253, 1715
CaiI	CAGNNNCTG	2 cut(s)	759, 2072
CciI	TCATGA	1 cut(s)	1110
CfoI	GCGC	1 cut(s)	252
Cfr10I	RCCGGY	1 cut(s)	373
Cfr9I	CCCGGG	1 cut(s)	1559
ClaI	ATCGAT	1 cut(s)	972
CseI	GACGC	4 cut(s)	200, 1244, 2185, 2610
CspCI	CAANNNNNGTGG	4 cut(s)	289, 324, 2131, 2166
CviAII	CATG	5 cut(s)	1111, 1228, 1233, 1340, 1862
DdeI	CTNAG	7 cut(s)	167, 384, 537, 956, 1665, 1758, 2016
DraIII	CACNNNGTG	1 cut(s)	591
DrdI	GACNNNNNNGTC	1 cut(s)	491
DseDI	GACNNNNNNGTC	1 cut(s)	491
EaeI	YGGCCR	3 cut(s)	348, 413, 882
EagI	CGGCCG	1 cut(s)	348
Eam1104I	CTCTTC	2 cut(s)	709, 2506
EarI	CTCTTC	2 cut(s)	709, 2506
EciI	GGCGGA	2 cut(s)	148, 1023
EclXI	CGGCCG	1 cut(s)	348
Eco130I	CCWWGG	2 cut(s)	1307, 1514
Eco31I	GGTCTC	1 cut(s)	2256
Eco32I	GATATC	2 cut(s)	502, 622
Eco47I	GGWCC	9 cut(s)	136, 493, 610, 630, 925, 1677, 1907, 2339, 2504
Eco52I	CGGCCG	1 cut(s)	348
Eco57I	CTGAAG	2 cut(s)	1620, 2601
Eco88I	CYCGRG	2 cut(s)	676, 1559
EcoO109I	RGGNCCY	3 cut(s)	630, 2504, 2576
EcoRII	CCWGG	7 cut(s)	550, 1177, 1195, 1272, 1355, 1452, 1985
EcoRV	GATATC	2 cut(s)	502, 622
EcoT14I	CCWWGG	2 cut(s)	1307, 1514
ErhI	CCWWGG	2 cut(s)	1307, 1514
Esp3I	CGTCTC	1 cut(s)	2168
FaeI	CATG	5 cut(s)	1114, 1231, 1236, 1343, 1865
FalI	AAGNNNNNCTT	4 cut(s)	760, 792, 1091, 1123
FaqI	GGGAC	3 cut(s)	1097, 2517, 2576
FatI	CATG	5 cut(s)	1110, 1227, 1232, 1339, 1861
FauI	CCCGC	1 cut(s)	170
FbaI	TGATCA	1 cut(s)	463
Fnu4HI	GCNGC	9 cut(s)	49, 381, 449, 534, 1025, 1404, 1779, 2155, 2422
Fsp4HI	GCNGC	9 cut(s)	49, 381, 449, 534, 1025, 1404, 1779, 2155, 2422
FspBI	CTAG	5 cut(s)	1308, 1857, 1875, 1967, 2508
GlaI	GCGC	1 cut(s)	251
GluI	GCNGC	9 cut(s)	49, 381, 449, 534, 1025, 1404, 1779, 2155, 2422
GsuI	CTGGAG	4 cut(s)	215, 386, 975, 1295
HaeIII	GGCC	9 cut(s)	350, 415, 884, 1305, 1558, 2157, 2296, 2483, 2578
HapII	CCGG	6 cut(s)	134, 278, 351, 374, 416, 1560
HgaI	GACGC	4 cut(s)	200, 1244, 2185, 2610
HhaI	GCGC	1 cut(s)	252
Hin1I	GRCGYC	1 cut(s)	192
Hin1II	CATG	5 cut(s)	1114, 1231, 1236, 1343, 1865
Hin6I	GCGC	1 cut(s)	250
HinP1I	GCGC	1 cut(s)	250
HincII	GTYRAC	1 cut(s)	1603
HindII	GTYRAC	1 cut(s)	1603
HindIII	AAGCTT	1 cut(s)	1924
HpaII	CCGG	6 cut(s)	134, 278, 351, 374, 416, 1560
Hpy166II	GTNNAC	6 cut(s)	406, 478, 583, 1259, 1522, 1603
Hpy188III	TCNNGA	8 cut(s)	199, 232, 639, 1111, 1875, 1881, 1967, 2441
Hpy8I	GTNNAC	6 cut(s)	406, 478, 583, 1259, 1522, 1603
Hpy99I	CGWCG	1 cut(s)	194
HpyCH4III	ACNGT	4 cut(s)	308, 922, 1481, 2339
HpyCH4IV	ACGT	3 cut(s)	1156, 1300, 1768
HpyF3I	CTNAG	7 cut(s)	167, 384, 537, 956, 1665, 1758, 2016
HpySE526I	ACGT	3 cut(s)	1156, 1300, 1768
Hsp92I	GRCGYC	1 cut(s)	192
Hsp92II	CATG	5 cut(s)	1114, 1231, 1236, 1343, 1865
HspAI	GCGC	1 cut(s)	250
Ksp22I	TGATCA	1 cut(s)	463
LmnI	GCTCC	6 cut(s)	30, 56, 215, 1391, 1982, 2533
Lsp1109I	GCAGC	5 cut(s)	35, 460, 1036, 1390, 1790
LweI	GCATC	7 cut(s)	307, 535, 662, 1138, 1336, 1531, 1636
MaeI	CTAG	5 cut(s)	1308, 1857, 1875, 1967, 2508
MaeII	ACGT	3 cut(s)	1156, 1300, 1768
MaeIII	GTNAC	6 cut(s)	891, 1103, 1448, 2306, 2426, 2471
MfeI	CAATTG	1 cut(s)	1653
MflI	RGATCY	3 cut(s)	875, 1420, 2414
MhlI	GDGCHC	2 cut(s)	408, 1513
MlsI	TGGCCA	1 cut(s)	884
MluI	ACGCGT	1 cut(s)	2602
MluNI	TGGCCA	1 cut(s)	884
MlyI	GAGTC	1 cut(s)	4
MmeI	TCCRAC	4 cut(s)	336, 539, 1033, 1935
Mox20I	TGGCCA	1 cut(s)	884
MroXI	GAANNNNTTC	1 cut(s)	2381
MscI	TGGCCA	1 cut(s)	884
MslI	CAYNNNNRTG	3 cut(s)	735, 1070, 1344
Msp20I	TGGCCA	1 cut(s)	884
MspI	CCGG	6 cut(s)	134, 278, 351, 374, 416, 1560
MunI	CAATTG	1 cut(s)	1653
Mva1269I	GAATGC	2 cut(s)	1196, 1781
MvaI	CCWGG	7 cut(s)	552, 1179, 1197, 1274, 1357, 1454, 1987
MvnI	CGCG	4 cut(s)	252, 2179, 2421, 2604
NciI	CCSGG	5 cut(s)	134, 278, 352, 1560, 1561
NlaIII	CATG	5 cut(s)	1114, 1231, 1236, 1343, 1865
NlaIV	GGNNCC	7 cut(s)	138, 877, 1678, 1984, 2482, 2505, 2577
NmeAIII	GCCGAG	1 cut(s)	2322
NmuCI	GTSAC	2 cut(s)	891, 1103
NspI	RCATGY	1 cut(s)	1236
PagI	TCATGA	1 cut(s)	1110
PasI	CCCWGGG	1 cut(s)	1196
PcsI	WCGNNNNNNNCGW	3 cut(s)	186, 195, 2251
PctI	GAATGC	2 cut(s)	1196, 1781
PdmI	GAANNNNTTC	1 cut(s)	2381
PfoI	TCCNGGA	1 cut(s)	1177
PkrI	GCNGC	9 cut(s)	50, 382, 450, 535, 1026, 1405, 1780, 2156, 2423
PleI	GAGTC	1 cut(s)	4
PpsI	GAGTC	1 cut(s)	4
PpuMI	RGGWCCY	2 cut(s)	630, 2504
PshAI	GACNNNNGTC	1 cut(s)	923
Psp5II	RGGWCCY	2 cut(s)	630, 2504
Psp6I	CCWGG	7 cut(s)	550, 1177, 1195, 1272, 1355, 1452, 1985
PspGI	CCWGG	7 cut(s)	550, 1177, 1195, 1272, 1355, 1452, 1985
PspN4I	GGNNCC	7 cut(s)	138, 877, 1678, 1984, 2482, 2505, 2577
PspPPI	RGGWCCY	2 cut(s)	630, 2504
PstNI	CAGNNNCTG	2 cut(s)	759, 2072
PsuI	RGATCY	3 cut(s)	875, 1420, 2414
RseI	CAYNNNNRTG	3 cut(s)	735, 1070, 1344
SatI	GCNGC	9 cut(s)	49, 381, 449, 534, 1025, 1404, 1779, 2155, 2422
SchI	GAGTC	1 cut(s)	4
SduI	GDGCHC	2 cut(s)	408, 1513
SfaNI	GCATC	7 cut(s)	307, 535, 662, 1138, 1336, 1531, 1636
SfcI	CTRYAG	1 cut(s)	760
SinI	GGWCC	9 cut(s)	136, 493, 610, 630, 925, 1677, 1907, 2339, 2504
SmaI	CCCGGG	1 cut(s)	1561
SmiMI	CAYNNNNRTG	3 cut(s)	735, 1070, 1344
SmlI	CTYRAG	1 cut(s)	1458
SmoI	CTYRAG	1 cut(s)	1458
SsiI	CCGC	7 cut(s)	159, 163, 380, 533, 1034, 2154, 2421
SspMI	CTAG	5 cut(s)	1308, 1857, 1875, 1967, 2508
StyI	CCWWGG	2 cut(s)	1307, 1514
TaaI	ACNGT	4 cut(s)	308, 922, 1481, 2339
TaiI	ACGT	3 cut(s)	1159, 1303, 1771
TaqI	TCGA	9 cut(s)	180, 189, 198, 257, 618, 638, 972, 1097, 2275
TaqII	GACCGA	1 cut(s)	627
TauI	GCSGC	4 cut(s)	383, 536, 2157, 2424
TscAI	CASTG	1 cut(s)	313
TseFI	GTSAC	2 cut(s)	891, 1103
TseI	GCWGC	5 cut(s)	48, 448, 1024, 1403, 1778
Tsp45I	GTSAC	2 cut(s)	891, 1103
TspGWI	ACGGA	4 cut(s)	835, 868, 917, 2341
TspMI	CCCGGG	1 cut(s)	1559
TspRI	CASTG	1 cut(s)	313
VneI	GTGCAC	1 cut(s)	404
VpaK11BI	GGWCC	9 cut(s)	136, 493, 610, 630, 925, 1677, 1907, 2339, 2504
XapI	RAATTY	7 cut(s)	1114, 1360, 1441, 1699, 2044, 2495, 2585
XbaI	TCTAGA	2 cut(s)	1874, 1966
XceI	RCATGY	1 cut(s)	1236
XmaI	CCCGGG	1 cut(s)	1559
XmaJI	CCTAGG	1 cut(s)	1307
XmnI	GAANNNNTTC	1 cut(s)	2381
XspI	CTAG	5 cut(s)	1308, 1857, 1875, 1967, 2508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.