Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006072

Physical Location & Seq

Genomic Coordinates Forward (+)

3511188 .. 3515812

Gene Structure 4625 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g06160.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

ATGGCACAATCTCCCTACTCCCTACTCCTCAAACGCCTCTCTCGCTATTCCCCAAACCCAAAACCCTTCTCCTTCCTTAAACCCTACTCCACCTCCTCCCCAAACCCCTCCTCCCTCTCCGCCCGCCTCAGCTTCGTCTTCGACCAAATCGACGTCATCGAGAAAGAACGCTCCGAGAAAGACCAAACCCTCCAAAAGATTCGAGCTTGGCGCGAATCCAAAAACCCCCAAACCCCAGAACTAGGATTTCACAATCCCCATGTCGATGAAGCAGTTTCATCTTCCGATGTGGGACCGGAGAAGCCCAGTTCGGTGGCGGTTAAGAAGGAGGTGGAGGTGGTGCACCCGTGGCCGGAGTGGATTGAGTTGATGGAGAGGCTGGTGGGGCAGAACTACTTTGACCATAGGAGGAAGGACGAGGACAGAATGGTCCAAGTCATGGGGGTTGATGCTTCGGATGTTGCTCCGGCCGGCGATGACTGCCAGGGTTTGGATTTTGGGGATTTCAAGGCTGTTCATACTGCTTGTCTTAATTTCGGCAAGGACCGGTTTGATATCTTCAGGTCCTTGTCGAGACAGGATATTCAAATTTTGGTGGGTTTTGGATGCCCGAGTACGGACAAGAAGGTGGTTTTTTCTTCAAAGCTGTTAAGGAAGCACACCCACCTTGATGAAGGAGATGTTTGTAGTTCCTGCAGTTTAAGGAATTCCTGTGAAAGAGCATATCTGATTACTAACAAAGAGGATGAGGCCCGGACCATTGATATAATGCGTGTTTTATTGACTTACGGCTTTGATCCTATAAACGGATCAGTACAAAACAAGTCACTTCTGAAACAGAAATCTGTTAAAACTGTAGTCCGCAAGTTGCTTCATCAGGTTGTCAAGCTGAGTTCAGTTCCAATAGATCCTAGTCTACCTCCTCCGGTGATCAAAAAGCCACCCCCAAAAGTGAAGCAGCCTCCTCCCCCTCCAAGAAAACGAGTTGGACGTGATGACATTGAGATGAAAAAAGGGGACTGGCTATGCTCTAAGTGCGACTTCATGAATTTTGCCAAAAACAGCCTGTGCCTGCAGTGTGATGCCAAGCGTCCAAAGAGACAGCTGCTTCCAGGAGAATGGGAATGCCCAGAGTGCAATTTTTTAAACTACAGGAGAAATATGGCATGTTTTCATTGTGATTGCAAGCGCCCACCTGATGAATATATTGAGAACAACATGCAAGAAAAGCAACGTGGCCATAGGACTAGGATGGATAACCCTGCGATTCGGCCCGATGCCTCTAATGCCTGGAATTTTGATTTTGATGACAATGAGTCAGATGGAGCGGATGTTGCTGCTTTTGAGTATGCAGATCCAGTAATGAGAGAAGGGTCTCTTGACAGCCAGGGTCGAGGGGAAAATTTTCGACATCCTGAATACGATTTGAGTAAAAATAGGAGAGTGTCAAGGGTTGACCATGGAGAATATTCTGATGCTGACAATATTAAGCCAGGCAGAGGGTTTGATGATTTTGATGATGAAGATGAGGATATTGACAATTACGAGTTGGACACTCGTACCAAAGATTCAGCACAGAAAACTTCAATTGATTTTTCTGAATTGGAGGGGTCTGAATCAGAAGACAGTGAAGGTCAAGACAATAATTTGCATGCTCACCGAGCAAACTCTTCATCTTACAATAAGCCATCTAAGCCTATGCCTCGACGAGCAGCATACTCTGTCTCAGATGATGATGAACTTGATATAAATTCTGACGAACACATTCCTGTTCTTCCCAACCGGAGATCAAGTCATGTTGCTGATTCTCGATCAAGAGGTAGGGGTAGAGACTCAAATGGTCCATCAAAGAGAGTAAGCTTTGTTTCTGATGATGATGTTGGGCTCTACTCTGATGTGGATGATGATCTAGATCAAAATATTAGATCCAGACAAGGTAAACCAAACAAACTGGGTTCTGGGAGAAAAGACTTTCAGAGGAGAAGAAATTTTGATAGTGAAGATGATTCAATGTCTGGTTCAGAATCAGAGAATGATGATTTTCATTCTCATAAAAATAGGCCCAGAGGAAATAAACCAAACAGTTTCAAAGGTGCACAATTTCAATCCAACGGAATGAAGAGTGGCAGGAAGAGTTCTTTCAGTGATGATGACTTTGGTGGATCAACCCGAGGGTCTCGTGATAACAGAGGATTTCGAGGGAATGGTTTTGATGGGCAGAGAATGAGTAACAGAGGTGTTGATAGGCAGAATTTCAAGGGGCCTAAAAGAGAAGGATTTGGAAATGGTGGTAGGAGAAACTCTTTTGGTGACAATTTTGATAGATCTAAACAAGTATCTCGTGGTAATAACAAAGGATTTCGGGAAAAAAACTTTGATGGGCACAGAACGAGTAACCGTGGCTTTGATAAACACAATTTTAAGGGACCTAAAAGAGAAGGATTTGGAAAGCCGCAGCGTGAAAGATTCAATAATGATAGAGACAAGGACGGGGACTTTGGTAACTTTAGCAATAGCCGACGTGTTATTGAAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RanBP

Protein Analysis

846

Amino Acids

96.18

Weight (kDa)

8.03

Isoelectric Point (pI)

49.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	337 - 365	4.1e-08	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006072)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55040
fragaria_vesca	FvH4_6g06160
malus_domestica	MD04G1203800.v1.1 MD12G1217600.v1.1
prunus_persica	Prupe.6G323900_v2.0.a1 Prupe.6G323900_v2.0.a1
pyrus_communis	pycom04g18030 pycom12g20320
rosa_chinensis	RchiOBHm_Chr1g0324471 RchiOBHm_Chr3g0455171
rosa_laevigata	RLG00000025382 RLG00000030198
rosa_multiflora	Rmu_sc0002169.1_g000027 Rmu_sc0002502.1_g000001 Rmu_sc0013000.1_g000010
rosa_roxburghii	Rroxscaffold_4G00325480 Rroxscaffold_6G00424520
rosa_rugosa	Rorug01G0046100 Rorug03G0004100 Rorug03G0004200
rosa_samantha	Rh1AG061900 Rh3AG065000 Rh3BG067100 Rh3CG065500 Rh3DG067000
rosa_wichuraiana	Rw1G005240 Rw3G005100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	428
AatII	GACGTC	1 cut(s)	156
AccB7I	CCANNNNNTGG	2 cut(s)	439, 490
AccBSI	CCGCTC	1 cut(s)	1328
AccI	GTMKAC	1 cut(s)	916
AccII	CGCG	1 cut(s)	213
AciI	CCGC	6 cut(s)	120, 124, 317, 862, 1328, 2453
AclWI	GGATC	6 cut(s)	791, 817, 902, 1349, 1920, 2170
AcoI	YGGCCR	3 cut(s)	350, 468, 1237
AcsI	RAATTY	8 cut(s)	588, 706, 1048, 1294, 1402, 1750, 1987, 2251
AcuI	CTGAAG	1 cut(s)	544
AcyI	GRCGYC	1 cut(s)	153
AfaI	GTAC	3 cut(s)	616, 816, 1561
AfiI	CCNNNNNNNGG	7 cut(s)	242, 352, 439, 490, 616, 806, 1499
AflIII	ACRYGT	1 cut(s)	2521
AgeI	ACCGGT	1 cut(s)	546
AhdI	GACNNNNNGTC	1 cut(s)	1315
AjiI	CACGTC	2 cut(s)	992, 2522
AjnI	CCWGG	5 cut(s)	483, 1111, 1289, 1386, 1492
AluBI	AGCT	6 cut(s)	132, 206, 646, 889, 1105, 1860
AluI	AGCT	6 cut(s)	132, 206, 646, 889, 1105, 1860
Alw21I	GWGCWC	2 cut(s)	345, 2098
Alw26I	GTCTC	7 cut(s)	568, 1093, 1380, 1729, 1824, 2181, 2475
Alw44I	GTGCAC	2 cut(s)	341, 2094
AlwI	GGATC	6 cut(s)	791, 817, 902, 1349, 1920, 2170
Ama87I	CYCGRG	2 cut(s)	610, 2169
AoxI	GGCC	7 cut(s)	350, 468, 750, 1237, 1271, 2060, 2261
ApaLI	GTGCAC	2 cut(s)	341, 2094
ApeKI	GCWGC	5 cut(s)	958, 1105, 1337, 1712, 2455
ApoI	RAATTY	8 cut(s)	588, 706, 1048, 1294, 1402, 1750, 1987, 2251
ArsI	GACNNNNNNTTYG	2 cut(s)	2480, 2512
AsiGI	ACCGGT	1 cut(s)	546
Asp700I	GAANNNNTTC	2 cut(s)	1404, 1764
AspLEI	GCGC	2 cut(s)	213, 1191
AsuC2I	CCSGG	1 cut(s)	754
AsuHPI	GGTGA	3 cut(s)	940, 1649, 2321
AvaI	CYCGRG	2 cut(s)	610, 2169
AvaII	GGWCC	7 cut(s)	293, 430, 544, 564, 756, 1841, 2426
BaeGI	GKGCMC	3 cut(s)	345, 2098, 2385
BaeI	ACNNNNGTAYC	2 cut(s)	1543, 1576
BalI	TGGCCA	1 cut(s)	1239
BanII	GRGCYC	1 cut(s)	1887
BauI	CACGAG	2 cut(s)	2178, 2340
BbsI	GAAGAC	2 cut(s)	130, 1629
Bbv12I	GWGCWC	2 cut(s)	345, 2098
BbvCI	CCTCAGC	1 cut(s)	128
BbvI	GCAGC	5 cut(s)	970, 1092, 1324, 1724, 2467
BccI	CCATC	7 cut(s)	364, 1246, 1316, 1696, 1852, 2207, 2372
BceAI	ACGGC	1 cut(s)	805
BciT130I	CCWGG	5 cut(s)	485, 1113, 1291, 1388, 1494
BclI	TGATCA	1 cut(s)	930
BcnI	CCSGG	1 cut(s)	754
BcoDI	GTCTC	7 cut(s)	568, 1093, 1380, 1729, 1824, 2181, 2475
BfaI	CTAG	4 cut(s)	242, 912, 1248, 1910
BfmI	CTRYAG	4 cut(s)	694, 855, 1073, 1150
BfoI	RGCGCY	1 cut(s)	1192
BglII	AGATCT	1 cut(s)	2324
BisI	GCNGC	6 cut(s)	959, 1106, 1338, 1713, 2453, 2456
BlsI	GCNGC	6 cut(s)	960, 1107, 1339, 1714, 2454, 2457
Bme1390I	CCNGG	6 cut(s)	485, 754, 1113, 1291, 1388, 1494
Bme18I	GGWCC	7 cut(s)	293, 430, 544, 564, 756, 1841, 2426
BmeRI	GACNNNNNGTC	1 cut(s)	1315
BmeT110I	CYCGRG	2 cut(s)	610, 2169
BmgBI	CACGTC	2 cut(s)	992, 2522
BmiI	GGNNCC	3 cut(s)	294, 2262, 2427
BmrFI	CCNGG	6 cut(s)	485, 754, 1113, 1291, 1388, 1494
BmrI	ACTGGG	2 cut(s)	300, 1961
BmsI	GCATC	5 cut(s)	439, 596, 1072, 1267, 1465
BmuI	ACTGGG	2 cut(s)	300, 1961
BpiI	GAAGAC	2 cut(s)	130, 1629
Bpu10I	CCTNAGC	1 cut(s)	128
BpuMI	CCSGG	1 cut(s)	754
BsaBI	GATNNNNATC	2 cut(s)	1905, 1911
BsaHI	GRCGYC	1 cut(s)	153
BsaI	GGTCTC	2 cut(s)	1380, 2181
BsaJI	CCNNGG	6 cut(s)	347, 484, 1387, 1459, 2170, 2398
BsaWI	WCCGGW	4 cut(s)	295, 546, 925, 1782
BsaXI	ACNNNNNCTCC	8 cut(s)	77, 95, 107, 125, 1317, 1347, 1777, 1807
Bsc4I	CCNNNNNNNGG	7 cut(s)	242, 352, 439, 490, 616, 806, 1499
Bse118I	RCCGGY	2 cut(s)	470, 546
Bse1I	ACTGG	4 cut(s)	306, 1025, 1358, 1956
Bse8I	GATNNNNATC	2 cut(s)	1905, 1911
BseBI	CCWGG	5 cut(s)	485, 1113, 1291, 1388, 1494
BseDI	CCNNGG	6 cut(s)	347, 484, 1387, 1459, 2170, 2398
BseGI	GGATG	7 cut(s)	463, 611, 751, 1257, 1336, 1411, 1906
BseJI	GATNNNNATC	2 cut(s)	1905, 1911
BseLI	CCNNNNNNNGG	7 cut(s)	242, 352, 439, 490, 616, 806, 1499
BseMII	CTCAG	3 cut(s)	142, 881, 1740
BseNI	ACTGG	4 cut(s)	306, 1025, 1358, 1956
BseRI	GAGGAG	6 cut(s)	17, 85, 100, 912, 954, 1993
BseSI	GKGCMC	3 cut(s)	345, 2098, 2385
BseX3I	CGGCCG	1 cut(s)	468
BseXI	GCAGC	5 cut(s)	970, 1092, 1324, 1724, 2467
Bsh1236I	CGCG	1 cut(s)	213
Bsh1285I	CGRYCG	1 cut(s)	471
BshFI	GGCC	7 cut(s)	352, 470, 752, 1239, 1273, 2062, 2263
BshTI	ACCGGT	1 cut(s)	546
BsiEI	CGRYCG	1 cut(s)	471
BsiHKAI	GWGCWC	2 cut(s)	345, 2098
BsiHKCI	CYCGRG	2 cut(s)	610, 2169
BsiSI	CCGG	8 cut(s)	296, 353, 467, 471, 547, 754, 926, 1783
BslFI	GGGAC	4 cut(s)	306, 1031, 2439, 2507
BslI	CCNNNNNNNGG	7 cut(s)	242, 352, 439, 490, 616, 806, 1499
BsmAI	GTCTC	7 cut(s)	568, 1093, 1380, 1729, 1824, 2181, 2475
BsmFI	GGGAC	4 cut(s)	306, 1031, 2439, 2507
BsmI	GAATGC	1 cut(s)	1130
BsnI	GGCC	7 cut(s)	352, 470, 752, 1239, 1273, 2062, 2263
Bso31I	GGTCTC	2 cut(s)	1380, 2181
BsoBI	CYCGRG	2 cut(s)	610, 2169
Bsp1286I	GDGCHC	4 cut(s)	345, 1887, 2098, 2385
Bsp19I	CCATGG	1 cut(s)	1459
BspACI	CCGC	6 cut(s)	120, 124, 317, 862, 1328, 2453
BspANI	GGCC	7 cut(s)	352, 470, 752, 1239, 1273, 2062, 2263
BspCNI	CTCAG	3 cut(s)	141, 882, 1739
BspFNI	CGCG	1 cut(s)	213
BspHI	TCATGA	1 cut(s)	1044
BspLI	GGNNCC	3 cut(s)	294, 2262, 2427
BspMAI	CTGCAG	2 cut(s)	698, 1077
BspPI	GGATC	6 cut(s)	791, 817, 902, 1349, 1920, 2170
BspTNI	GGTCTC	2 cut(s)	1380, 2181
BsrBI	CCGCTC	1 cut(s)	1328
BsrFI	RCCGGY	2 cut(s)	470, 546
BsrI	ACTGG	4 cut(s)	306, 1025, 1358, 1956
BssAI	RCCGGY	2 cut(s)	470, 546
BssECI	CCNNGG	6 cut(s)	347, 484, 1387, 1459, 2170, 2398
BssNI	GRCGYC	1 cut(s)	153
BssSI	CACGAG	2 cut(s)	2178, 2340
BssT1I	CCWWGG	1 cut(s)	1459
Bst2BI	CACGAG	2 cut(s)	2178, 2340
Bst2UI	CCWGG	5 cut(s)	485, 1113, 1291, 1388, 1494
Bst4CI	ACNGT	4 cut(s)	856, 1628, 2084, 2399
Bst6I	CTCTTC	3 cut(s)	1675, 2114, 2126
BstACI	GRCGYC	1 cut(s)	153
BstC8I	GCNNGC	5 cut(s)	124, 472, 1073, 1187, 1653
BstDEI	CTNAG	5 cut(s)	128, 890, 1032, 1692, 1726
BstDSI	CCRYGG	3 cut(s)	347, 1459, 2398
BstF5I	GGATG	7 cut(s)	463, 611, 751, 1257, 1336, 1411, 1906
BstFNI	CGCG	1 cut(s)	213
BstH2I	RGCGCY	1 cut(s)	1192
BstHHI	GCGC	2 cut(s)	213, 1191
BstMAI	GTCTC	7 cut(s)	568, 1093, 1380, 1729, 1824, 2181, 2475
BstMCI	CGRYCG	1 cut(s)	471
BstNI	CCWGG	5 cut(s)	485, 1113, 1291, 1388, 1494
BstNSI	RCATGY	3 cut(s)	1170, 1222, 1655
BstSCI	CCNGG	6 cut(s)	483, 752, 1111, 1289, 1386, 1492
BstSFI	CTRYAG	4 cut(s)	694, 855, 1073, 1150
BstSLI	GKGCMC	3 cut(s)	345, 2098, 2385
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	5 cut(s)	970, 1092, 1324, 1724, 2467
BstV2I	GAAGAC	2 cut(s)	130, 1629
BstX2I	RGATCY	4 cut(s)	907, 1354, 1925, 2324
BstXI	CCANNNNNNTGG	2 cut(s)	313, 1119
BstYI	RGATCY	4 cut(s)	907, 1354, 1925, 2324
BstZI	CGGCCG	1 cut(s)	468
BsuRI	GGCC	7 cut(s)	352, 470, 752, 1239, 1273, 2062, 2263
BtgI	CCRYGG	3 cut(s)	347, 1459, 2398
BtgZI	GCGATG	1 cut(s)	489
BtrI	CACGTC	2 cut(s)	992, 2522
BtsCI	GGATG	7 cut(s)	463, 611, 751, 1257, 1336, 1411, 1906
BtsI	GCAGTG	1 cut(s)	1082
BtsIMutI	CAGTG	3 cut(s)	1082, 1633, 2149
Cac8I	GCNNGC	5 cut(s)	124, 472, 1073, 1187, 1653
CciI	TCATGA	1 cut(s)	1044
CfoI	GCGC	2 cut(s)	213, 1191
Cfr10I	RCCGGY	2 cut(s)	470, 546
CseI	GACGC	1 cut(s)	1079
Csp6I	GTAC	3 cut(s)	615, 815, 1560
CspAI	ACCGGT	1 cut(s)	546
CviAII	CATG	8 cut(s)	260, 439, 1045, 1167, 1219, 1460, 1652, 1796
CviQI	GTAC	3 cut(s)	615, 815, 1560
DdeI	CTNAG	5 cut(s)	128, 890, 1032, 1692, 1726
DraI	TTTAAA	1 cut(s)	1146
DrdI	GACNNNNNNGTC	1 cut(s)	428
DriI	GACNNNNNGTC	1 cut(s)	1315
DseDI	GACNNNNNNGTC	1 cut(s)	428
EaeI	YGGCCR	3 cut(s)	350, 468, 1237
EagI	CGGCCG	1 cut(s)	468
Eam1104I	CTCTTC	3 cut(s)	1675, 2114, 2126
Eam1105I	GACNNNNNGTC	1 cut(s)	1315
EarI	CTCTTC	3 cut(s)	1675, 2114, 2126
EciI	GGCGGA	1 cut(s)	109
EclXI	CGGCCG	1 cut(s)	468
Eco130I	CCWWGG	1 cut(s)	1459
Eco24I	GRGCYC	1 cut(s)	1887
Eco31I	GGTCTC	2 cut(s)	1380, 2181
Eco32I	GATATC	1 cut(s)	556
Eco47I	GGWCC	7 cut(s)	293, 430, 544, 564, 756, 1841, 2426
Eco52I	CGGCCG	1 cut(s)	468
Eco57I	CTGAAG	1 cut(s)	544
Eco88I	CYCGRG	2 cut(s)	610, 2169
EcoO109I	RGGNCCY	3 cut(s)	564, 2261, 2426
EcoRI	GAATTC	1 cut(s)	706
EcoRII	CCWGG	5 cut(s)	483, 1111, 1289, 1386, 1492
EcoRV	GATATC	1 cut(s)	556
EcoT14I	CCWWGG	1 cut(s)	1459
EcoT38I	GRGCYC	1 cut(s)	1887
ErhI	CCWWGG	1 cut(s)	1459
FaeI	CATG	8 cut(s)	263, 442, 1048, 1170, 1222, 1463, 1655, 1799
FalI	AAGNNNNNCTT	4 cut(s)	1025, 1057, 1362, 1394
FaqI	GGGAC	4 cut(s)	306, 1031, 2439, 2507
FatI	CATG	8 cut(s)	259, 438, 1044, 1166, 1218, 1459, 1651, 1795
FauI	CCCGC	1 cut(s)	131
FbaI	TGATCA	1 cut(s)	930
FblI	GTMKAC	1 cut(s)	916
Fnu4HI	GCNGC	6 cut(s)	959, 1106, 1338, 1713, 2453, 2456
FokI	GGATG	7 cut(s)	470, 618, 758, 1264, 1343, 1398, 1913
FriOI	GRGCYC	1 cut(s)	1887
Fsp4HI	GCNGC	6 cut(s)	959, 1106, 1338, 1713, 2453, 2456
FspBI	CTAG	4 cut(s)	242, 912, 1248, 1910
GlaI	GCGC	2 cut(s)	212, 1190
GluI	GCNGC	6 cut(s)	959, 1106, 1338, 1713, 2453, 2456
HaeII	RGCGCY	1 cut(s)	1192
HaeIII	GGCC	7 cut(s)	352, 470, 752, 1239, 1273, 2062, 2263
HapII	CCGG	8 cut(s)	296, 353, 467, 471, 547, 754, 926, 1783
HgaI	GACGC	1 cut(s)	1079
HhaI	GCGC	2 cut(s)	213, 1191
Hin1I	GRCGYC	1 cut(s)	153
Hin1II	CATG	8 cut(s)	263, 442, 1048, 1170, 1222, 1463, 1655, 1799
Hin6I	GCGC	2 cut(s)	211, 1189
HinP1I	GCGC	2 cut(s)	211, 1189
HincII	GTYRAC	1 cut(s)	1456
HindII	GTYRAC	1 cut(s)	1456
HindIII	AAGCTT	1 cut(s)	1858
HpaII	CCGG	8 cut(s)	296, 353, 467, 471, 547, 754, 926, 1783
HphI	GGTGA	3 cut(s)	940, 1649, 2321
Hpy166II	GTNNAC	5 cut(s)	343, 917, 1456, 1940, 2096
Hpy8I	GTNNAC	5 cut(s)	343, 917, 1456, 1940, 2096
Hpy99I	CGWCG	3 cut(s)	155, 1710, 2523
HpyCH4III	ACNGT	4 cut(s)	856, 1628, 2084, 2399
HpyCH4IV	ACGT	4 cut(s)	153, 991, 1234, 2521
HpyCH4V	TGCA	9 cut(s)	343, 696, 1075, 1137, 1185, 1222, 1352, 1651, 2096
HpyF3I	CTNAG	5 cut(s)	128, 890, 1032, 1692, 1726
HpySE526I	ACGT	4 cut(s)	153, 991, 1234, 2521
Hsp92I	GRCGYC	1 cut(s)	153
Hsp92II	CATG	8 cut(s)	263, 442, 1048, 1170, 1222, 1463, 1655, 1799
HspAI	GCGC	2 cut(s)	211, 1189
KroI	GCCGGC	1 cut(s)	470
KroNI	GCCGGC	1 cut(s)	472
Ksp22I	TGATCA	1 cut(s)	930
LmnI	GCTCC	3 cut(s)	176, 469, 1325
Lsp1109I	GCAGC	5 cut(s)	970, 1092, 1324, 1724, 2467
LweI	GCATC	5 cut(s)	439, 596, 1072, 1267, 1465
MaeI	CTAG	4 cut(s)	242, 912, 1248, 1910
MaeII	ACGT	4 cut(s)	153, 991, 1234, 2521
MaeIII	GTNAC	5 cut(s)	825, 2228, 2309, 2393, 2501
MbiI	CCGCTC	1 cut(s)	1328
MfeI	CAATTG	1 cut(s)	1587
MflI	RGATCY	4 cut(s)	907, 1354, 1925, 2324
MhlI	GDGCHC	4 cut(s)	345, 1887, 2098, 2385
MlsI	TGGCCA	1 cut(s)	1239
MluNI	TGGCCA	1 cut(s)	1239
MlyI	GAGTC	2 cut(s)	1325, 1826
MmeI	TCCRAC	3 cut(s)	967, 1530, 2133
Mox20I	TGGCCA	1 cut(s)	1239
MroNI	GCCGGC	1 cut(s)	470
MroXI	GAANNNNTTC	2 cut(s)	1404, 1764
MscI	TGGCCA	1 cut(s)	1239
MseI	TTAA	9 cut(s)	78, 321, 531, 650, 701, 849, 1145, 1488, 2421
MslI	CAYNNNNRTG	3 cut(s)	264, 669, 1004
Msp20I	TGGCCA	1 cut(s)	1239
MspA1I	CMGCKG	1 cut(s)	1105
MspI	CCGG	8 cut(s)	296, 353, 467, 471, 547, 754, 926, 1783
MspR9I	CCNGG	6 cut(s)	485, 754, 1113, 1291, 1388, 1494
MunI	CAATTG	1 cut(s)	1587
Mva1269I	GAATGC	1 cut(s)	1130
MvaI	CCWGG	5 cut(s)	485, 1113, 1291, 1388, 1494
MvnI	CGCG	1 cut(s)	213
NaeI	GCCGGC	1 cut(s)	472
NciI	CCSGG	1 cut(s)	754
NcoI	CCATGG	1 cut(s)	1459
NgoMIV	GCCGGC	1 cut(s)	470
NlaIII	CATG	8 cut(s)	263, 442, 1048, 1170, 1222, 1463, 1655, 1799
NlaIV	GGNNCC	3 cut(s)	294, 2262, 2427
NmuCI	GTSAC	2 cut(s)	825, 2309
NspI	RCATGY	3 cut(s)	1170, 1222, 1655
PaeI	GCATGC	1 cut(s)	1655
PagI	TCATGA	1 cut(s)	1044
PcsI	WCGNNNNNNNCGW	3 cut(s)	147, 156, 988
PctI	GAATGC	1 cut(s)	1130
PdiI	GCCGGC	1 cut(s)	472
PdmI	GAANNNNTTC	2 cut(s)	1404, 1764
PfeI	GAWTC	9 cut(s)	199, 215, 1267, 1568, 1616, 1805, 2006, 2024, 2466
PflMI	CCANNNNNTGG	2 cut(s)	439, 490
PfoI	TCCNGGA	1 cut(s)	1111
PinAI	ACCGGT	1 cut(s)	546
PkrI	GCNGC	6 cut(s)	960, 1107, 1339, 1714, 2454, 2457
PleI	GAGTC	2 cut(s)	1324, 1826
PpsI	GAGTC	2 cut(s)	1324, 1826
PpuMI	RGGWCCY	2 cut(s)	564, 2426
Psp5II	RGGWCCY	2 cut(s)	564, 2426
Psp6I	CCWGG	5 cut(s)	483, 1111, 1289, 1386, 1492
PspGI	CCWGG	5 cut(s)	483, 1111, 1289, 1386, 1492
PspN4I	GGNNCC	3 cut(s)	294, 2262, 2427
PspPPI	RGGWCCY	2 cut(s)	564, 2426
PstI	CTGCAG	2 cut(s)	698, 1077
PsuI	RGATCY	4 cut(s)	907, 1354, 1925, 2324
PvuII	CAGCTG	1 cut(s)	1105
RsaI	GTAC	3 cut(s)	616, 816, 1561
RsaNI	GTAC	3 cut(s)	615, 815, 1560
RseI	CAYNNNNRTG	3 cut(s)	264, 669, 1004
SaqAI	TTAA	9 cut(s)	78, 321, 531, 650, 701, 849, 1145, 1488, 2421
SatI	GCNGC	6 cut(s)	959, 1106, 1338, 1713, 2453, 2456
SchI	GAGTC	2 cut(s)	1325, 1826
ScrFI	CCNGG	6 cut(s)	485, 754, 1113, 1291, 1388, 1494
SduI	GDGCHC	4 cut(s)	345, 1887, 2098, 2385
SfaNI	GCATC	5 cut(s)	439, 596, 1072, 1267, 1465
SfcI	CTRYAG	4 cut(s)	694, 855, 1073, 1150
SinI	GGWCC	7 cut(s)	293, 430, 544, 564, 756, 1841, 2426
SmiMI	CAYNNNNRTG	3 cut(s)	264, 669, 1004
SphI	GCATGC	1 cut(s)	1655
SsiI	CCGC	6 cut(s)	120, 124, 317, 862, 1328, 2453
SspI	AATATT	3 cut(s)	1469, 1486, 1921
SspMI	CTAG	4 cut(s)	242, 912, 1248, 1910
StyD4I	CCNGG	6 cut(s)	483, 752, 1111, 1289, 1386, 1492
StyI	CCWWGG	1 cut(s)	1459
TaaI	ACNGT	4 cut(s)	856, 1628, 2084, 2399
TaiI	ACGT	4 cut(s)	156, 994, 1237, 2524
TatI	WGTACW	1 cut(s)	814
TauI	GCSGC	1 cut(s)	2455
TfiI	GAWTC	9 cut(s)	199, 215, 1267, 1568, 1616, 1805, 2006, 2024, 2466
Tru1I	TTAA	9 cut(s)	78, 321, 531, 650, 701, 849, 1145, 1488, 2421
Tru9I	TTAA	9 cut(s)	78, 321, 531, 650, 701, 849, 1145, 1488, 2421
TscAI	CASTG	3 cut(s)	1082, 1633, 2149
TseFI	GTSAC	2 cut(s)	825, 2309
TseI	GCWGC	5 cut(s)	958, 1105, 1337, 1712, 2455
Tsp45I	GTSAC	2 cut(s)	825, 2309
TspGWI	ACGGA	3 cut(s)	632, 822, 2127
TspRI	CASTG	3 cut(s)	1082, 1633, 2149
Van91I	CCANNNNNTGG	2 cut(s)	439, 490
VneI	GTGCAC	2 cut(s)	341, 2094
VpaK11BI	GGWCC	7 cut(s)	293, 430, 544, 564, 756, 1841, 2426
XapI	RAATTY	8 cut(s)	588, 706, 1048, 1294, 1402, 1750, 1987, 2251
XbaI	TCTAGA	1 cut(s)	1909
XceI	RCATGY	3 cut(s)	1170, 1222, 1655
XmiI	GTMKAC	1 cut(s)	916
XmnI	GAANNNNTTC	2 cut(s)	1404, 1764
XspI	CTAG	4 cut(s)	242, 912, 1248, 1910
ZraI	GACGTC	1 cut(s)	154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.