Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0006072

Physical Location & Seq

Genomic Coordinates Forward (+)

4519407 .. 4523755

Gene Structure 4349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG067000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGGCACAATCTCCGTACTCTCTCCTCAGGCGTTTGATCTGTCGCTATTCCTTAAACCCAAAACCCTCTCCGCCTCTCTTCTCTCTCCTAAAACCCTTCTCTACCTCCTCCTCGAACCCAAACCCTTCCTCTCTCTCCGCTCGCCTCAGCTTCGTCTTCGACCAAATCGACGCCATTGAGAAAGACCGCTCCGACAAGGACCAAACCCTCCAAAAGATCCGAGCTTGGCGCGAATCCAAAAACCCCCAATCCCCAGAATTAGGGTTCGAAAATGCCCGCCTCGATTCGATTGGTCCCTCCTCCGCCGACGTGGGACCGGAGAAGCCCGCGGCGGCGGTGAAGAAGGAGGTGGAGGTGGTGCACCCGTGGCCGGAGTGGATTGAACTGATGGAGAGGCTGGTGCAGCAGAACTACTTTGACCATAGGAGGAAGGACGAGGACAGAATGGTCCAAGAAATGGGCTTTGATGCCTCTGAAATCCATGATGATTCCCAGGGTTTGGATTTCAGGGATTTCAAGGCTGTTCATACTGCCTGTCTTAATTTCGGGAAGGACCGGTTTGATATTTTCAGGTCCTTGTCGAGACAGGATATTCAAATTTTGGTGGGTTTTGGATGCCCGAGTACGGACAAGAAGGTGGTTTTCTCTTCGAAGCTGTTAAGGAAGCACACCCACCTTGATGAAGGAGATGTATGTAGTTCCTGCAGTTTAAGGAATTCCTGTGAAAGAGCATATCTGATTACTAACAAAGAGGATGAGGCGCGGACTATTGATATAATGCGTGTTTTATTGACTTATGGCTTTGATCCTATAAATGGATCAGTACAAAACAGGTCACTTCTAAAACAAAAAACCGTTAAAACTGTAGTCCGTAAGTTGCTTCATCAGGTTGTCAAGCTGAGTTCAGTTCCAATAGATCCTAGTCTACCTCCTCCGGTGATCAAAAAGCCACCCCCAAAAGTGAAGCAGCCTCCTCCCCCTCCAAGAAAACGAGTTGGACGTGATGACATTGAGATGAAAAAAGGGGACTGGCTATGCTCTAAGTGCGACTTCATGAATTTTGCCAAGAACAGCCTGTGCCTGCAGTGTGATGCCAAGCGTCCAAAGAGACAGCTGCTTCCAGGAGAATGGGAGTGCCCAGAGTGCAACTTTTTAAATTACAGGAGAAATATGGCATGTTTTCATTGTGATTGCAAGCGCCCACCTGATGAATATATTGAGAACAACATGCAAGAAAAGCAACGTGGCCCTAGGACTAGGATGGATAAGACTGCGATTCGGCCCGAGGCCTCTAATGCCTGGAATTTTGATTTTGATGACAATGAGTCAGATGGGGCAGATGTTGCTGCTTTTGAGTATGCGGATCCAGTAATGAGTGAAGGGTCTCTTGACACCCAGGCTCAAGGGGAAAATTTTCGACGTCCTGAATACGATTTCAGTAAAAATAGGAGAGTGTCAAGGGTTGACAATGAAGAATATTCTGATGCTGACACTATTAAGCCAGGCAGAGGGTTTGATGATTTTGATGATGAAGATGATGATATTGACAATTACGAGTTGGACACTCGTCCTAAAGATTCAGCACAGAACACTTCTTCAGTTGATTTTTCTGAATTGGAGGGATCTGAATCAGAAAACAGTGAAGGTCCAGACAATAATTTGCATGCTCGCAAAACACTCTCTCCATCTTACAATAAGCCATCTAAGTCTATACATCGACGGGCAGCATTATCTGTCTCAGATGATGATGAAATTGATTTAAATTCTGACGAAGACCTTTCAGTTCTTCCCAACCGAAGATCAAGTCATGTTGCTGATTCTAGATCAAGAGGTAGGGGTAGAAACTCAACTAGTCCATCAAAGAGAGTAAGCTTTGTATCTGATGATGAAGCTGGGCTCTACTCTGATGTGGATGATGATCTAGATCAAAATATTAGATCCAGACAAGGTAAACTGAACAAATTGAGTTCTGGGAGAAAAGACTTTCAGAGGAGAAGAAATTTTGATAGTGAAGATGATTCAATGTCTGGTTCAGATTCAGAGAATGATGATTTTCATTCTCATAAAAATAGGCACAGAGGAAATAAACCAAACAGTTTCAAAGGTGCACAATTTAAATCCAGCGGAATGAAGAGTGGCAGGAAGAACTCTTTCAGCGATGATGACTTTGATAGACCAACCCGAGGGGCTCGTGATAACAGAGGATTTCGAGGGAATGATTTTGATGGCAAGAGAATGAGTAACAGAGGTGTTGATAGGCAGAATTTTAAGGGGCCTAAAAGAGAAGCATTTGGAAATGGTGGTAGGAGAAACTCTTTTGGTGACGATTTTGATAGATCTAAACAAGTATCTCGTGGTAATAACAGAGGATTTCGGGAAAACAACTTTGCTGGGCAGAGAATGAGTAACCGTGGCTTTGATAAACACGATTTTAAGGGACCTAAAAGAGAAGGATTTGGAAAGCAGCAGCGTGAAAGATTTAATAATGATTGGGACAAGGACAGGGACTTTGGTAACTTTAGCAATAGTCGACGCGTTATTGAAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010225 GO:0016035 GO:0018130 GO:0019438 GO:0019985 GO:0032991 GO:0033554 GO:0034641 GO:0034644 GO:0034645 GO:0034654 GO:0042276 GO:0042575 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0061695 GO:0071214 GO:0071478 GO:0071482 GO:0071494 GO:0071704 GO:0071897 GO:0090304 GO:0104004 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko01100 ko01524 ko03460 map01100 map01524 map03460

Pfam Domains

Protein Families

DNA_pol_B DNA_pol_B_exo1 RVT_2 zf-C4pol zf-RanBP

Protein Analysis

849

Amino Acids

97.19

Weight (kDa)

8.03

Isoelectric Point (pI)

53.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	340 - 368	4.1e-08	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006072)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55040
fragaria_vesca	FvH4_6g06160
malus_domestica	MD04G1203800.v1.1 MD12G1217600.v1.1
prunus_persica	Prupe.6G323900_v2.0.a1 Prupe.6G323900_v2.0.a1
pyrus_communis	pycom04g18030 pycom12g20320
rosa_chinensis	RchiOBHm_Chr1g0324471 RchiOBHm_Chr3g0455171
rosa_laevigata	RLG00000025382 RLG00000030198
rosa_multiflora	Rmu_sc0002169.1_g000027 Rmu_sc0002502.1_g000001 Rmu_sc0013000.1_g000010
rosa_roxburghii	Rroxscaffold_4G00325480 Rroxscaffold_6G00424520
rosa_rugosa	Rorug01G0046100 Rorug03G0004100 Rorug03G0004200
rosa_samantha	Rh1AG061900 Rh3AG065000 Rh3BG067100 Rh3CG065500 Rh3DG067000
rosa_wichuraiana	Rw1G005240 Rw3G005100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	446
AatII	GACGTC	1 cut(s)	1423
AccB7I	CCANNNNNTGG	2 cut(s)	457, 499
AccBSI	CCGCTC	2 cut(s)	140, 189
AccI	GTMKAC	2 cut(s)	925, 2530
AccII	CGCG	4 cut(s)	231, 329, 763, 2535
AclWI	GGATC	8 cut(s)	211, 800, 826, 911, 1358, 1371, 1630, 1932
AcoI	YGGCCR	1 cut(s)	368
AcsI	RAATTY	8 cut(s)	597, 715, 1057, 1303, 1411, 1762, 1999, 2263
AcuI	CTGAAG	1 cut(s)	1581
AcyI	GRCGYC	2 cut(s)	171, 1420
AfaI	GTAC	3 cut(s)	17, 625, 825
AfiI	CCNNNNNNNGG	8 cut(s)	260, 370, 457, 499, 625, 815, 1508, 2183
AflIII	ACRYGT	1 cut(s)	2533
AgeI	ACCGGT	1 cut(s)	555
AgsI	TTSAA	6 cut(s)	383, 517, 596, 2022, 2101, 2543
AhdI	GACNNNNNGTC	1 cut(s)	1324
AhlI	ACTAGT	1 cut(s)	1850
AjiI	CACGTC	2 cut(s)	310, 1001
AjnI	CCWGG	5 cut(s)	492, 1120, 1298, 1395, 1501
AluBI	AGCT	7 cut(s)	150, 224, 655, 898, 1114, 1872, 1892
AluI	AGCT	7 cut(s)	150, 224, 655, 898, 1114, 1872, 1892
Alw21I	GWGCWC	2 cut(s)	363, 2110
Alw26I	GTCTC	4 cut(s)	577, 1102, 1389, 1741
Alw44I	GTGCAC	2 cut(s)	359, 2106
AlwI	GGATC	8 cut(s)	211, 800, 826, 911, 1358, 1371, 1630, 1932
Ama87I	CYCGRG	3 cut(s)	619, 1283, 2181
AoxI	GGCC	5 cut(s)	368, 1246, 1280, 1287, 2273
ApaLI	GTGCAC	2 cut(s)	359, 2106
ApeKI	GCWGC	7 cut(s)	403, 967, 1114, 1346, 1724, 2464, 2467
ApoI	RAATTY	8 cut(s)	597, 715, 1057, 1303, 1411, 1762, 1999, 2263
ArsI	GACNNNNNNTTYG	4 cut(s)	1789, 1821, 2492, 2524
AsiGI	ACCGGT	1 cut(s)	555
Asp700I	GAANNNNTTC	2 cut(s)	1413, 2150
AspA2I	CCTAGG	1 cut(s)	1250
AspLEI	GCGC	3 cut(s)	231, 763, 1200
AsuHPI	GGTGA	3 cut(s)	349, 949, 2333
AsuII	TTCGAA	2 cut(s)	267, 650
AvaI	CYCGRG	3 cut(s)	619, 1283, 2181
AvaII	GGWCC	8 cut(s)	199, 293, 314, 448, 553, 573, 1646, 2438
AvrII	CCTAGG	1 cut(s)	1250
AxyI	CCTNAGG	1 cut(s)	26
BaeGI	GKGCMC	3 cut(s)	363, 1139, 2110
BamHI	GGATCC	1 cut(s)	1363
BanII	GRGCYC	2 cut(s)	1899, 2191
BauI	CACGAG	2 cut(s)	2190, 2352
BbsI	GAAGAC	2 cut(s)	148, 1779
Bbv12I	GWGCWC	2 cut(s)	363, 2110
BbvCI	CCTCAGC	1 cut(s)	146
BbvI	GCAGC	7 cut(s)	415, 979, 1101, 1333, 1736, 2476, 2479
BccI	CCATC	7 cut(s)	382, 1255, 1325, 1693, 1708, 1864, 2219
BciT130I	CCWGG	5 cut(s)	494, 1122, 1300, 1397, 1503
BclI	TGATCA	1 cut(s)	939
BcoDI	GTCTC	4 cut(s)	577, 1102, 1389, 1741
BcuI	ACTAGT	1 cut(s)	1850
BfaI	CTAG	6 cut(s)	921, 1251, 1257, 1821, 1851, 1922
BfmI	CTRYAG	3 cut(s)	703, 864, 1082
BfoI	RGCGCY	1 cut(s)	1201
BglII	AGATCT	1 cut(s)	2336
BisI	GCNGC	9 cut(s)	330, 333, 404, 968, 1115, 1347, 1725, 2465, 2468
BlnI	CCTAGG	1 cut(s)	1250
BlsI	GCNGC	9 cut(s)	331, 334, 405, 969, 1116, 1348, 1726, 2466, 2469
Bme1390I	CCNGG	5 cut(s)	494, 1122, 1300, 1397, 1503
Bme18I	GGWCC	8 cut(s)	199, 293, 314, 448, 553, 573, 1646, 2438
BmeRI	GACNNNNNGTC	1 cut(s)	1324
BmeT110I	CYCGRG	3 cut(s)	619, 1283, 2181
BmgBI	CACGTC	2 cut(s)	310, 1001
BmiI	GGNNCC	5 cut(s)	295, 315, 1365, 2274, 2439
BmrFI	CCNGG	5 cut(s)	494, 1122, 1300, 1397, 1503
BmsI	GCATC	4 cut(s)	457, 605, 1081, 1474
BoxI	GACNNNNGTC	1 cut(s)	1566
BpiI	GAAGAC	2 cut(s)	148, 1779
Bpu10I	CCTNAGC	1 cut(s)	146
Bpu14I	TTCGAA	2 cut(s)	267, 650
BpuEI	CTTGAG	1 cut(s)	1386
BsaBI	GATNNNNATC	3 cut(s)	1627, 1917, 1923
BsaHI	GRCGYC	2 cut(s)	171, 1420
BsaI	GGTCTC	1 cut(s)	1389
BsaJI	CCNNGG	9 cut(s)	327, 365, 492, 493, 1250, 1284, 1395, 2182, 2410
BsaWI	WCCGGW	3 cut(s)	316, 555, 934
BsaXI	ACNNNNNCTCC	2 cut(s)	1666, 1696
Bsc4I	CCNNNNNNNGG	8 cut(s)	260, 370, 457, 499, 625, 815, 1508, 2183
Bse118I	RCCGGY	1 cut(s)	555
Bse1I	ACTGG	2 cut(s)	1034, 1367
Bse21I	CCTNAGG	1 cut(s)	26
Bse8I	GATNNNNATC	3 cut(s)	1627, 1917, 1923
BseBI	CCWGG	5 cut(s)	494, 1122, 1300, 1397, 1503
BseDI	CCNNGG	9 cut(s)	327, 365, 492, 493, 1250, 1284, 1395, 2182, 2410
BseGI	GGATG	4 cut(s)	620, 760, 1266, 1918
BseJI	GATNNNNATC	3 cut(s)	1627, 1917, 1923
BseLI	CCNNNNNNNGG	8 cut(s)	260, 370, 457, 499, 625, 815, 1508, 2183
BseMII	CTCAG	4 cut(s)	40, 160, 890, 1752
BseNI	ACTGG	2 cut(s)	1034, 1367
BseRI	GAGGAG	7 cut(s)	14, 97, 100, 289, 921, 963, 2005
BseSI	GKGCMC	3 cut(s)	363, 1139, 2110
BseXI	GCAGC	7 cut(s)	415, 979, 1101, 1333, 1736, 2476, 2479
BseYI	CCCAGC	2 cut(s)	1892, 2390
BsgI	GTGCAG	1 cut(s)	422
Bsh1236I	CGCG	4 cut(s)	231, 329, 763, 2535
BshFI	GGCC	5 cut(s)	370, 1248, 1282, 1289, 2275
BshTI	ACCGGT	1 cut(s)	555
BsiHKAI	GWGCWC	2 cut(s)	363, 2110
BsiHKCI	CYCGRG	3 cut(s)	619, 1283, 2181
BsiSI	CCGG	4 cut(s)	317, 371, 556, 935
BslFI	GGGAC	6 cut(s)	279, 327, 1040, 2451, 2507, 2519
BslI	CCNNNNNNNGG	8 cut(s)	260, 370, 457, 499, 625, 815, 1508, 2183
BsmAI	GTCTC	4 cut(s)	577, 1102, 1389, 1741
BsmFI	GGGAC	6 cut(s)	279, 327, 1040, 2451, 2507, 2519
BsnI	GGCC	5 cut(s)	370, 1248, 1282, 1289, 2275
Bso31I	GGTCTC	1 cut(s)	1389
BsoBI	CYCGRG	3 cut(s)	619, 1283, 2181
Bsp119I	TTCGAA	2 cut(s)	267, 650
Bsp1286I	GDGCHC	5 cut(s)	363, 1139, 1899, 2110, 2191
BspANI	GGCC	5 cut(s)	370, 1248, 1282, 1289, 2275
BspCNI	CTCAG	4 cut(s)	39, 159, 891, 1751
BspFNI	CGCG	4 cut(s)	231, 329, 763, 2535
BspHI	TCATGA	1 cut(s)	1053
BspLI	GGNNCC	5 cut(s)	295, 315, 1365, 2274, 2439
BspMAI	CTGCAG	2 cut(s)	707, 1086
BspPI	GGATC	8 cut(s)	211, 800, 826, 911, 1358, 1371, 1630, 1932
BspT104I	TTCGAA	2 cut(s)	267, 650
BspTNI	GGTCTC	1 cut(s)	1389
BsrBI	CCGCTC	2 cut(s)	140, 189
BsrFI	RCCGGY	1 cut(s)	555
BsrI	ACTGG	2 cut(s)	1034, 1367
BssAI	RCCGGY	1 cut(s)	555
BssECI	CCNNGG	9 cut(s)	327, 365, 492, 493, 1250, 1284, 1395, 2182, 2410
BssNI	GRCGYC	2 cut(s)	171, 1420
BssSI	CACGAG	2 cut(s)	2190, 2352
BssT1I	CCWWGG	1 cut(s)	1250
Bst2BI	CACGAG	2 cut(s)	2190, 2352
Bst2UI	CCWGG	5 cut(s)	494, 1122, 1300, 1397, 1503
Bst4CI	ACNGT	5 cut(s)	856, 865, 1640, 2096, 2411
Bst6I	CTCTTC	3 cut(s)	83, 652, 2126
BstACI	GRCGYC	2 cut(s)	171, 1420
BstAPI	GCANNNNNTGC	1 cut(s)	1343
BstBI	TTCGAA	2 cut(s)	267, 650
BstC8I	GCNNGC	7 cut(s)	142, 277, 327, 1082, 1196, 1665, 1669
BstDEI	CTNAG	6 cut(s)	26, 146, 899, 1041, 1704, 1738
BstDSI	CCRYGG	3 cut(s)	327, 365, 2410
BstF5I	GGATG	4 cut(s)	620, 760, 1266, 1918
BstFNI	CGCG	4 cut(s)	231, 329, 763, 2535
BstH2I	RGCGCY	1 cut(s)	1201
BstHHI	GCGC	3 cut(s)	231, 763, 1200
BstMAI	GTCTC	4 cut(s)	577, 1102, 1389, 1741
BstMWI	GCNNNNNNNGC	7 cut(s)	367, 403, 1044, 1143, 1237, 1295, 1343
BstNI	CCWGG	5 cut(s)	494, 1122, 1300, 1397, 1503
BstNSI	RCATGY	3 cut(s)	1179, 1231, 1667
BstPAI	GACNNNNGTC	1 cut(s)	1566
BstSCI	CCNGG	5 cut(s)	492, 1120, 1298, 1395, 1501
BstSFI	CTRYAG	3 cut(s)	703, 864, 1082
BstSLI	GKGCMC	3 cut(s)	363, 1139, 2110
BstUI	CGCG	4 cut(s)	231, 329, 763, 2535
BstV1I	GCAGC	7 cut(s)	415, 979, 1101, 1333, 1736, 2476, 2479
BstV2I	GAAGAC	2 cut(s)	148, 1779
BstX2I	RGATCY	6 cut(s)	216, 916, 1363, 1622, 1937, 2336
BstXI	CCANNNNNNTGG	1 cut(s)	1128
BstYI	RGATCY	6 cut(s)	216, 916, 1363, 1622, 1937, 2336
Bsu36I	CCTNAGG	1 cut(s)	26
BsuRI	GGCC	5 cut(s)	370, 1248, 1282, 1289, 2275
BtgI	CCRYGG	3 cut(s)	327, 365, 2410
BtgZI	GCGATG	1 cut(s)	2172
BtrI	CACGTC	2 cut(s)	310, 1001
BtsCI	GGATG	4 cut(s)	620, 760, 1266, 1918
BtsI	GCAGTG	1 cut(s)	1091
BtsIMutI	CAGTG	2 cut(s)	1091, 1645
Cac8I	GCNNGC	7 cut(s)	142, 277, 327, 1082, 1196, 1665, 1669
CciI	TCATGA	1 cut(s)	1053
CfoI	GCGC	3 cut(s)	231, 763, 1200
Cfr10I	RCCGGY	1 cut(s)	555
Cfr42I	CCGCGG	1 cut(s)	330
CseI	GACGC	3 cut(s)	179, 1088, 2541
Csp6I	GTAC	3 cut(s)	16, 624, 824
CspAI	ACCGGT	1 cut(s)	555
CviAII	CATG	6 cut(s)	482, 1054, 1176, 1228, 1664, 1808
CviQI	GTAC	3 cut(s)	16, 624, 824
DdeI	CTNAG	6 cut(s)	26, 146, 899, 1041, 1704, 1738
DraI	TTTAAA	3 cut(s)	1155, 1761, 2116
DrdI	GACNNNNNNGTC	1 cut(s)	446
DriI	GACNNNNNGTC	1 cut(s)	1324
DseDI	GACNNNNNNGTC	1 cut(s)	446
EaeI	YGGCCR	1 cut(s)	368
Eam1104I	CTCTTC	3 cut(s)	83, 652, 2126
Eam1105I	GACNNNNNGTC	1 cut(s)	1324
EarI	CTCTTC	3 cut(s)	83, 652, 2126
EciI	GGCGGA	2 cut(s)	60, 292
Eco130I	CCWWGG	1 cut(s)	1250
Eco147I	AGGCCT	1 cut(s)	1289
Eco24I	GRGCYC	2 cut(s)	1899, 2191
Eco31I	GGTCTC	1 cut(s)	1389
Eco47I	GGWCC	8 cut(s)	199, 293, 314, 448, 553, 573, 1646, 2438
Eco57I	CTGAAG	1 cut(s)	1581
Eco81I	CCTNAGG	1 cut(s)	26
Eco88I	CYCGRG	3 cut(s)	619, 1283, 2181
EcoO109I	RGGNCCY	3 cut(s)	573, 2273, 2438
EcoRI	GAATTC	1 cut(s)	715
EcoRII	CCWGG	5 cut(s)	492, 1120, 1298, 1395, 1501
EcoT14I	CCWWGG	1 cut(s)	1250
EcoT38I	GRGCYC	2 cut(s)	1899, 2191
ErhI	CCWWGG	1 cut(s)	1250
FaeI	CATG	6 cut(s)	485, 1057, 1179, 1231, 1667, 1811
FalI	AAGNNNNNCTT	4 cut(s)	1034, 1066, 1371, 1403
FaqI	GGGAC	6 cut(s)	279, 327, 1040, 2451, 2507, 2519
FatI	CATG	6 cut(s)	481, 1053, 1175, 1227, 1663, 1807
FauI	CCCGC	2 cut(s)	284, 334
FbaI	TGATCA	1 cut(s)	939
FblI	GTMKAC	2 cut(s)	925, 2530
Fnu4HI	GCNGC	9 cut(s)	330, 333, 404, 968, 1115, 1347, 1725, 2465, 2468
FokI	GGATG	4 cut(s)	627, 767, 1273, 1925
FriOI	GRGCYC	2 cut(s)	1899, 2191
Fsp4HI	GCNGC	9 cut(s)	330, 333, 404, 968, 1115, 1347, 1725, 2465, 2468
FspBI	CTAG	6 cut(s)	921, 1251, 1257, 1821, 1851, 1922
GlaI	GCGC	3 cut(s)	230, 762, 1199
GluI	GCNGC	9 cut(s)	330, 333, 404, 968, 1115, 1347, 1725, 2465, 2468
GsaI	CCCAGC	2 cut(s)	1896, 2394
HaeII	RGCGCY	1 cut(s)	1201
HaeIII	GGCC	5 cut(s)	370, 1248, 1282, 1289, 2275
HapII	CCGG	4 cut(s)	317, 371, 556, 935
HgaI	GACGC	3 cut(s)	179, 1088, 2541
HhaI	GCGC	3 cut(s)	231, 763, 1200
Hin1I	GRCGYC	2 cut(s)	171, 1420
Hin1II	CATG	6 cut(s)	485, 1057, 1179, 1231, 1667, 1811
Hin6I	GCGC	3 cut(s)	229, 761, 1198
HinP1I	GCGC	3 cut(s)	229, 761, 1198
HincII	GTYRAC	2 cut(s)	1465, 2531
HindII	GTYRAC	2 cut(s)	1465, 2531
HindIII	AAGCTT	1 cut(s)	1870
HpaII	CCGG	4 cut(s)	317, 371, 556, 935
HphI	GGTGA	3 cut(s)	349, 949, 2333
Hpy166II	GTNNAC	6 cut(s)	361, 926, 1465, 1952, 2108, 2531
Hpy8I	GTNNAC	6 cut(s)	361, 926, 1465, 1952, 2108, 2531
Hpy99I	CGWCG	5 cut(s)	173, 311, 1422, 1722, 2535
HpyCH4III	ACNGT	5 cut(s)	856, 865, 1640, 2096, 2411
HpyCH4IV	ACGT	4 cut(s)	309, 1000, 1243, 1420
HpyCH4V	TGCA	9 cut(s)	361, 403, 705, 1084, 1146, 1194, 1231, 1663, 2108
HpyF10VI	GCNNNNNNNGC	7 cut(s)	367, 403, 1044, 1143, 1237, 1295, 1343
HpyF3I	CTNAG	6 cut(s)	26, 146, 899, 1041, 1704, 1738
HpySE526I	ACGT	4 cut(s)	309, 1000, 1243, 1420
Hsp92I	GRCGYC	2 cut(s)	171, 1420
Hsp92II	CATG	6 cut(s)	485, 1057, 1179, 1231, 1667, 1811
HspAI	GCGC	3 cut(s)	229, 761, 1198
Ksp22I	TGATCA	1 cut(s)	939
KspI	CCGCGG	1 cut(s)	330
LmnI	GCTCC	1 cut(s)	194
Lsp1109I	GCAGC	7 cut(s)	415, 979, 1101, 1333, 1736, 2476, 2479
LweI	GCATC	4 cut(s)	457, 605, 1081, 1474
MaeI	CTAG	6 cut(s)	921, 1251, 1257, 1821, 1851, 1922
MaeII	ACGT	4 cut(s)	309, 1000, 1243, 1420
MaeIII	GTNAC	5 cut(s)	834, 2240, 2321, 2405, 2513
MbiI	CCGCTC	2 cut(s)	140, 189
MflI	RGATCY	6 cut(s)	216, 916, 1363, 1622, 1937, 2336
MhlI	GDGCHC	5 cut(s)	363, 1139, 1899, 2110, 2191
MluI	ACGCGT	1 cut(s)	2533
MlyI	GAGTC	1 cut(s)	1334
MmeI	TCCRAC	3 cut(s)	216, 976, 1539
MroXI	GAANNNNTTC	2 cut(s)	1413, 2150
MslI	CAYNNNNRTG	2 cut(s)	678, 1013
MspA1I	CMGCKG	3 cut(s)	329, 1114, 2124
MspI	CCGG	4 cut(s)	317, 371, 556, 935
MspR9I	CCNGG	5 cut(s)	494, 1122, 1300, 1397, 1503
MvaI	CCWGG	5 cut(s)	494, 1122, 1300, 1397, 1503
MvnI	CGCG	4 cut(s)	231, 329, 763, 2535
MwoI	GCNNNNNNNGC	7 cut(s)	367, 403, 1044, 1143, 1237, 1295, 1343
NlaIII	CATG	6 cut(s)	485, 1057, 1179, 1231, 1667, 1811
NlaIV	GGNNCC	5 cut(s)	295, 315, 1365, 2274, 2439
NmuCI	GTSAC	2 cut(s)	834, 2321
NspI	RCATGY	3 cut(s)	1179, 1231, 1667
NspV	TTCGAA	2 cut(s)	267, 650
PaeI	GCATGC	1 cut(s)	1667
PagI	TCATGA	1 cut(s)	1053
PasI	CCCWGGG	1 cut(s)	493
PceI	AGGCCT	1 cut(s)	1289
PcsI	WCGNNNNNNNCGW	2 cut(s)	165, 997
PdmI	GAANNNNTTC	2 cut(s)	1413, 2150
PfeI	GAWTC	9 cut(s)	233, 284, 488, 1276, 1577, 1628, 1817, 2018, 2036
PflMI	CCANNNNNTGG	2 cut(s)	457, 499
PfoI	TCCNGGA	1 cut(s)	1120
PinAI	ACCGGT	1 cut(s)	555
PkrI	GCNGC	9 cut(s)	331, 334, 405, 969, 1116, 1348, 1726, 2466, 2469
PleI	GAGTC	1 cut(s)	1333
PpsI	GAGTC	1 cut(s)	1333
PpuMI	RGGWCCY	2 cut(s)	573, 2438
PshAI	GACNNNNGTC	1 cut(s)	1566
Psp5II	RGGWCCY	2 cut(s)	573, 2438
Psp6I	CCWGG	5 cut(s)	492, 1120, 1298, 1395, 1501
PspFI	CCCAGC	2 cut(s)	1892, 2390
PspGI	CCWGG	5 cut(s)	492, 1120, 1298, 1395, 1501
PspN4I	GGNNCC	5 cut(s)	295, 315, 1365, 2274, 2439
PspPPI	RGGWCCY	2 cut(s)	573, 2438
PstI	CTGCAG	2 cut(s)	707, 1086
PsuI	RGATCY	6 cut(s)	216, 916, 1363, 1622, 1937, 2336
PvuII	CAGCTG	1 cut(s)	1114
RsaI	GTAC	3 cut(s)	17, 625, 825
RsaNI	GTAC	3 cut(s)	16, 624, 824
RseI	CAYNNNNRTG	2 cut(s)	678, 1013
SacII	CCGCGG	1 cut(s)	330
SalI	GTCGAC	1 cut(s)	2529
SatI	GCNGC	9 cut(s)	330, 333, 404, 968, 1115, 1347, 1725, 2465, 2468
SchI	GAGTC	1 cut(s)	1334
ScrFI	CCNGG	5 cut(s)	494, 1122, 1300, 1397, 1503
SduI	GDGCHC	5 cut(s)	363, 1139, 1899, 2110, 2191
SfaNI	GCATC	4 cut(s)	457, 605, 1081, 1474
SfcI	CTRYAG	3 cut(s)	703, 864, 1082
Sfr303I	CCGCGG	1 cut(s)	330
SfuI	TTCGAA	2 cut(s)	267, 650
SgrBI	CCGCGG	1 cut(s)	330
SinI	GGWCC	8 cut(s)	199, 293, 314, 448, 553, 573, 1646, 2438
SmiI	ATTTAAAT	2 cut(s)	1761, 2116
SmiMI	CAYNNNNRTG	2 cut(s)	678, 1013
SmlI	CTYRAG	1 cut(s)	1401
SmoI	CTYRAG	1 cut(s)	1401
SpeI	ACTAGT	1 cut(s)	1850
SphI	GCATGC	1 cut(s)	1667
SseBI	AGGCCT	1 cut(s)	1289
SspI	AATATT	2 cut(s)	1478, 1933
SspMI	CTAG	6 cut(s)	921, 1251, 1257, 1821, 1851, 1922
StuI	AGGCCT	1 cut(s)	1289
StyD4I	CCNGG	5 cut(s)	492, 1120, 1298, 1395, 1501
StyI	CCWWGG	1 cut(s)	1250
SwaI	ATTTAAAT	2 cut(s)	1761, 2116
TaaI	ACNGT	5 cut(s)	856, 865, 1640, 2096, 2411
TaiI	ACGT	4 cut(s)	312, 1003, 1246, 1423
TatI	WGTACW	1 cut(s)	823
TauI	GCSGC	2 cut(s)	332, 335
TfiI	GAWTC	9 cut(s)	233, 284, 488, 1276, 1577, 1628, 1817, 2018, 2036
TscAI	CASTG	2 cut(s)	1091, 1645
TseFI	GTSAC	2 cut(s)	834, 2321
TseI	GCWGC	7 cut(s)	403, 967, 1114, 1346, 1724, 2464, 2467
Tsp45I	GTSAC	2 cut(s)	834, 2321
TspGWI	ACGGA	2 cut(s)	641, 860
TspRI	CASTG	2 cut(s)	1091, 1645
Van91I	CCANNNNNTGG	2 cut(s)	457, 499
VneI	GTGCAC	2 cut(s)	359, 2106
VpaK11BI	GGWCC	8 cut(s)	199, 293, 314, 448, 553, 573, 1646, 2438
XapI	RAATTY	8 cut(s)	597, 715, 1057, 1303, 1411, 1762, 1999, 2263
XbaI	TCTAGA	2 cut(s)	1820, 1921
XceI	RCATGY	3 cut(s)	1179, 1231, 1667
XmaJI	CCTAGG	1 cut(s)	1250
XmiI	GTMKAC	2 cut(s)	925, 2530
XmnI	GAANNNNTTC	2 cut(s)	1413, 2150
XspI	CTAG	6 cut(s)	921, 1251, 1257, 1821, 1851, 1922
ZraI	GACGTC	1 cut(s)	1421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.