No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10220 AT1G10220 AT1G59590 |
| fragaria_vesca | FvH4_2g33050 FvH4_7g23760 |
| malus_domestica | MD01G1144800.v1.1 MD07G1211400.v1.1 MD08G1082000.v1.1 MD15G1068500.v1.1 |
| prunus_persica | Prupe.1G422400_v2.0.a1 Prupe.2G244200_v2.0.a1 |
| pyrus_communis | pycom01g16440 pycom07g19490 pycom15g06490 |
| rosa_chinensis | RchiOBHm_Chr1g0369071 RchiOBHm_Chr6g0309661 |
| rosa_laevigata | RLG00000010546 RLG00000027159 |
| rosa_multiflora | Rmu_co8421877.1_g000001 Rmu_sc0004250.1_g000024 Rmu_sc0007632.1_g000008 Rmu_sc0008155.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00288030 |
| rosa_rugosa | Rorug01G0347800 Rorug06G0373700 |
| rosa_samantha | Rh1AG354600 Rh1BG318000 Rh1CG332400 Rh1DG348800 Rh6AG487200 Rh6BG496900 Rh6CG501500 Rh6DG487700 |
| rosa_wichuraiana | Rw1G031310 Rw6G042440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 359 |
| AccII | CGCG | 1 cut(s) | 542 |
| AciI | CCGC | 1 cut(s) | 164 |
| AclWI | GGATC | 2 cut(s) | 399, 532 |
| AcsI | RAATTY | 1 cut(s) | 89 |
| AcuI | CTGAAG | 1 cut(s) | 392 |
| AfaI | GTAC | 1 cut(s) | 485 |
| AgsI | TTSAA | 3 cut(s) | 72, 503, 581 |
| AluBI | AGCT | 6 cut(s) | 100, 112, 148, 192, 269, 351 |
| AluI | AGCT | 6 cut(s) | 100, 112, 148, 192, 269, 351 |
| AlwI | GGATC | 2 cut(s) | 399, 532 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 329 |
| AoxI | GGCC | 1 cut(s) | 160 |
| ApoI | RAATTY | 1 cut(s) | 89 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 273, 305 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 557 |
| AspS9I | GGNCC | 1 cut(s) | 161 |
| AsuHPI | GGTGA | 4 cut(s) | 16, 24, 209, 522 |
| BanII | GRGCYC | 1 cut(s) | 11 |
| BbsI | GAAGAC | 1 cut(s) | 257 |
| BclI | TGATCA | 2 cut(s) | 216, 616 |
| BfaI | CTAG | 3 cut(s) | 113, 384, 564 |
| BfmI | CTRYAG | 1 cut(s) | 453 |
| BglII | AGATCT | 2 cut(s) | 17, 449 |
| BmgT120I | GGNCC | 1 cut(s) | 161 |
| BmiI | GGNNCC | 1 cut(s) | 492 |
| BmsI | GCATC | 1 cut(s) | 141 |
| BpiI | GAAGAC | 1 cut(s) | 257 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 89, 121 |
| BsaWI | WCCGGW | 3 cut(s) | 155, 194, 388 |
| BseMII | CTCAG | 1 cut(s) | 87 |
| BseRI | GAGGAG | 1 cut(s) | 615 |
| Bsh1236I | CGCG | 1 cut(s) | 542 |
| BshFI | GGCC | 1 cut(s) | 162 |
| BsiSI | CCGG | 3 cut(s) | 156, 195, 389 |
| BslFI | GGGAC | 1 cut(s) | 191 |
| BsmFI | GGGAC | 1 cut(s) | 191 |
| BsnI | GGCC | 1 cut(s) | 162 |
| Bsp1286I | GDGCHC | 1 cut(s) | 11 |
| Bsp143I | GATC | 9 cut(s) | 17, 216, 221, 378, 391, 414, 449, 524, 616 |
| BspACI | CCGC | 1 cut(s) | 164 |
| BspANI | GGCC | 1 cut(s) | 162 |
| BspCNI | CTCAG | 1 cut(s) | 88 |
| BspFNI | CGCG | 1 cut(s) | 542 |
| BspLI | GGNNCC | 1 cut(s) | 492 |
| BspPI | GGATC | 2 cut(s) | 399, 532 |
| BssMI | GATC | 9 cut(s) | 17, 216, 221, 378, 391, 414, 449, 524, 616 |
| Bst4CI | ACNGT | 3 cut(s) | 412, 534, 610 |
| Bst6I | CTCTTC | 1 cut(s) | 116 |
| BstC8I | GCNNGC | 2 cut(s) | 55, 164 |
| BstDEI | CTNAG | 1 cut(s) | 96 |
| BstFNI | CGCG | 1 cut(s) | 542 |
| BstKTI | GATC | 9 cut(s) | 20, 219, 224, 381, 394, 417, 452, 527, 619 |
| BstMBI | GATC | 9 cut(s) | 17, 216, 221, 378, 391, 414, 449, 524, 616 |
| BstSFI | CTRYAG | 1 cut(s) | 453 |
| BstUI | CGCG | 1 cut(s) | 542 |
| BstV2I | GAAGAC | 1 cut(s) | 257 |
| BstX2I | RGATCY | 2 cut(s) | 17, 449 |
| BstYI | RGATCY | 2 cut(s) | 17, 449 |
| BsuRI | GGCC | 1 cut(s) | 162 |
| BtgZI | GCGATG | 1 cut(s) | 557 |
| Cac8I | GCNNGC | 2 cut(s) | 55, 164 |
| CaiI | CAGNNNCTG | 1 cut(s) | 329 |
| Cfr13I | GGNCC | 1 cut(s) | 161 |
| Csp6I | GTAC | 1 cut(s) | 484 |
| CviAII | CATG | 1 cut(s) | 24 |
| CviQI | GTAC | 1 cut(s) | 484 |
| DdeI | CTNAG | 1 cut(s) | 96 |
| DpnI | GATC | 9 cut(s) | 19, 218, 223, 380, 393, 416, 451, 526, 618 |
| DpnII | GATC | 9 cut(s) | 17, 216, 221, 378, 391, 414, 449, 524, 616 |
| Eam1104I | CTCTTC | 1 cut(s) | 116 |
| EarI | CTCTTC | 1 cut(s) | 116 |
| Eco24I | GRGCYC | 1 cut(s) | 11 |
| Eco57I | CTGAAG | 1 cut(s) | 392 |
| EcoT38I | GRGCYC | 1 cut(s) | 11 |
| FaeI | CATG | 1 cut(s) | 27 |
| FaiI | YATR | 3 cut(s) | 25, 359, 464 |
| FaqI | GGGAC | 1 cut(s) | 191 |
| FatI | CATG | 1 cut(s) | 23 |
| FauI | CCCGC | 1 cut(s) | 171 |
| FbaI | TGATCA | 2 cut(s) | 216, 616 |
| FriOI | GRGCYC | 1 cut(s) | 11 |
| FspBI | CTAG | 3 cut(s) | 113, 384, 564 |
| HaeIII | GGCC | 1 cut(s) | 162 |
| HapII | CCGG | 3 cut(s) | 156, 195, 389 |
| Hin1II | CATG | 1 cut(s) | 27 |
| HinfI | GANTC | 3 cut(s) | 152, 367, 499 |
| HpaII | CCGG | 3 cut(s) | 156, 195, 389 |
| HphI | GGTGA | 4 cut(s) | 16, 24, 209, 522 |
| Hpy166II | GTNNAC | 3 cut(s) | 80, 186, 468 |
| Hpy188I | TCNGA | 4 cut(s) | 97, 109, 221, 372 |
| Hpy188III | TCNNGA | 4 cut(s) | 45, 316, 503, 614 |
| Hpy8I | GTNNAC | 3 cut(s) | 80, 186, 468 |
| HpyCH4III | ACNGT | 3 cut(s) | 412, 534, 610 |
| HpyF3I | CTNAG | 1 cut(s) | 96 |
| Hsp92II | CATG | 1 cut(s) | 27 |
| Ksp22I | TGATCA | 2 cut(s) | 216, 616 |
| Kzo9I | GATC | 9 cut(s) | 17, 216, 221, 378, 391, 414, 449, 524, 616 |
| LmnI | GCTCC | 1 cut(s) | 197 |
| LpnPI | CCDG | 5 cut(s) | 169, 208, 342, 402, 417 |
| LweI | GCATC | 1 cut(s) | 141 |
| MaeI | CTAG | 3 cut(s) | 113, 384, 564 |
| MaeIII | GTNAC | 1 cut(s) | 406 |
| MalI | GATC | 9 cut(s) | 19, 218, 223, 380, 393, 416, 451, 526, 618 |
| MboI | GATC | 9 cut(s) | 17, 216, 221, 378, 391, 414, 449, 524, 616 |
| MflI | RGATCY | 2 cut(s) | 17, 449 |
| MhlI | GDGCHC | 1 cut(s) | 11 |
| MluCI | AATT | 2 cut(s) | 89, 569 |
| MmeI | TCCRAC | 1 cut(s) | 518 |
| MnlI | CCTC | 5 cut(s) | 117, 177, 301, 515, 636 |
| MroXI | GAANNNNTTC | 1 cut(s) | 557 |
| MseI | TTAA | 1 cut(s) | 597 |
| MspI | CCGG | 3 cut(s) | 156, 195, 389 |
| MvnI | CGCG | 1 cut(s) | 542 |
| NdeII | GATC | 9 cut(s) | 17, 216, 221, 378, 391, 414, 449, 524, 616 |
| NlaIII | CATG | 1 cut(s) | 27 |
| NlaIV | GGNNCC | 1 cut(s) | 492 |
| NmuCI | GTSAC | 1 cut(s) | 406 |
| PdmI | GAANNNNTTC | 1 cut(s) | 557 |
| PfeI | GAWTC | 3 cut(s) | 152, 367, 499 |
| PsiI | TTATAA | 1 cut(s) | 359 |
| PspN4I | GGNNCC | 1 cut(s) | 492 |
| PspPI | GGNCC | 1 cut(s) | 161 |
| PstNI | CAGNNNCTG | 1 cut(s) | 329 |
| PsuI | RGATCY | 2 cut(s) | 17, 449 |
| RsaI | GTAC | 1 cut(s) | 485 |
| RsaNI | GTAC | 1 cut(s) | 484 |
| SaqAI | TTAA | 1 cut(s) | 597 |
| Sau3AI | GATC | 9 cut(s) | 17, 216, 221, 378, 391, 414, 449, 524, 616 |
| Sau96I | GGNCC | 1 cut(s) | 161 |
| SduI | GDGCHC | 1 cut(s) | 11 |
| SetI | ASST | 6 cut(s) | 102, 114, 150, 194, 271, 353 |
| SfaNI | GCATC | 1 cut(s) | 141 |
| SfcI | CTRYAG | 1 cut(s) | 453 |
| Sse9I | AATT | 2 cut(s) | 89, 569 |
| SsiI | CCGC | 1 cut(s) | 164 |
| SspMI | CTAG | 3 cut(s) | 113, 384, 564 |
| TaaI | ACNGT | 3 cut(s) | 412, 534, 610 |
| TaqI | TCGA | 3 cut(s) | 140, 150, 175 |
| TasI | AATT | 2 cut(s) | 89, 569 |
| TfiI | GAWTC | 3 cut(s) | 152, 367, 499 |
| Tru1I | TTAA | 1 cut(s) | 597 |
| Tru9I | TTAA | 1 cut(s) | 597 |
| TseFI | GTSAC | 1 cut(s) | 406 |
| Tsp45I | GTSAC | 1 cut(s) | 406 |
| TspDTI | ATGAA | 1 cut(s) | 560 |
| XapI | RAATTY | 1 cut(s) | 89 |
| XmnI | GAANNNNTTC | 1 cut(s) | 557 |
| XspI | CTAG | 3 cut(s) | 113, 384, 564 |