AT1G61670

Lung seven transmembrane receptor family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003014
Physical Location & Seq
Forward (+)
22769364 .. 22772426
3063 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61670.2

Sequence Viewer

Length: 1542 bp
ATGAAGAATCGTTCTTTAGGGTTTTGGGCGATCGGGGTTTTGCTCATCGGAAGCTTGATCGGAGCTACGGAAGGCTCGATTCATGAGTACAACAACGAAAAGTTCACTGCAAAATTCAATGCTCGCTTCTTCCATGGTGGTAGCGAAGGTCTTTACGCTTCCAAATCTCAAGATCTAAACTCTTCTTCTTCTTCTGATAATTCTTTTAAAGGCAAGTCCTTTATAAGGTTTGATGATGTAACATTTGTGAGGACAAAGGAATCTGCTAGTAAACAGAATGCAATGCAGTCAACTTCAGGATTAGTGGAAGCAATTATACTTGAGGTAAAAGACCGTGATAGAATCGGTGGTACTTTTCTCAAATCCGAAGTGATTTGTTGCACGCCGGAGCTAGCTGATACTGGATCTTGTAGTCTTGGGGAAGTTATCATTAAGAGAGAGTCTAATGATGTTGAGTGGCCAAGACAGATCAAGACATTCTTTAAAGGGAATAAGACTGAAGTTAACATGTCCCCTGAAACTGTGGTTATCAATAAGACTGGGATGTATTATCTTTATTTCATGATATGTGACCCGGAATTGGATGGTACTAGGATCAAGGGGAGAACAGTTTGGAAGAACCCTGATGGTTATTTACCTGGAAAGGTTGCTCCTTTAATGAACGTTTTTGGCTTTATGTCGTTAGCGTATATTTTGCTTGGTCTAGTTTGGTTTGTGAGGTTTGTTCAGTTTTGGAAGGATATAATTCAGTTGCATTATCATATCACTTTGGTTATTGCTCTTGGTATGTGTGAAATGGCTGTTCGATACTTTGAGTATGTTAATTTTAACTCCACTGGGATGAGGCCAATGGATGTTACCCTATGGGCGGTGACCTTTTCTTCTATAAAGAAGACGCTTTCTAGGCTTCTTCTTCTGGTAGTCTCTATGGGTTATGGTGTTGTAAAGCCTACCCTTGGTGGTATAACCTCGAGGATACTTCTACTTGGAGTCATATATTTTGTTGCAACAGAGGCTCTTGAGTTGGTTGAGCATTTGGGAAACATCAATGACTTTTCGGGAAAGACGATGATAGTTTTGGTTATTCCCGTGGCATTACTGGATGCTTGCTTTATTCTGTGGATTTTCTCATCATTGGCAAGAACACTTGAGAAACTTCAGATTAAGAGAAACATGGCCAAGCTTGAGCTTTATAGGAACTTCACCAATGCACTCGCTATCTCTGTTCTGCTCTCTATCGCTTGGATTGGTTTTGAGCTATACTTCAACGGAACTGACCCTCTAATCGAACTCTGGCGAATGGCGTGGATCATTCCAGCTTTTTGGAATTTACTCTCTTATGGTCTGTTAGCAGTCATATGCATCCTTTGGGCTCCATCAAATAATCCTACAAGGTACTCATACTTAGCGGAAACAGGGGATGAGTTTGAAGAGGAAGGTATCTCATTGACAGGTAGTGGAATTAAGAGTACAGAAGATGTTGAAAGGAATGAACTTCTATTTGGGCTTCCAGACGACGTTGAAGAGGGCAAACGTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lung_7-TM_R

Protein Analysis

513

Amino Acids

57.69

Weight (kDa)

5.78

Isoelectric Point (pI)

33.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GOST_TM PF06814 218 - 463 9.5e-95 GOST, seven transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 224
AbsI CCTCGAGG 1 cut(s) 970
AciI CCGC 2 cut(s) 869, 1409
AclI AACGTT 1 cut(s) 663
AclWI GGATC 3 cut(s) 412, 602, 1316
AcoI YGGCCR 2 cut(s) 458, 1176
AcsI RAATTY 2 cut(s) 113, 1327
AcuI CTGAAG 3 cut(s) 279, 519, 1142
AfaI GTAC 5 cut(s) 89, 352, 589, 1397, 1471
AfiI CCNNNNNNNGG 4 cut(s) 225, 580, 868, 956
AflIII ACRYGT 1 cut(s) 507
AgsI TTSAA 5 cut(s) 118, 1267, 1430, 1484, 1523
AjnI CCWGG 1 cut(s) 637
AjuI GAANNNNNNNTTGG 2 cut(s) 1485, 1517
AluBI AGCT 8 cut(s) 54, 65, 391, 395, 1183, 1189, 1258, 1319
AluI AGCT 8 cut(s) 54, 65, 391, 395, 1183, 1189, 1258, 1319
Alw26I GTCTC 1 cut(s) 928
AlwI GGATC 3 cut(s) 412, 602, 1316
Ama87I CYCGRG 1 cut(s) 970
AoxI GGCC 3 cut(s) 458, 845, 1176
ApoI RAATTY 2 cut(s) 113, 1327
AsuC2I CCSGG 1 cut(s) 575
AsuHPI GGTGA 2 cut(s) 883, 1195
AsuNHI GCTAGC 1 cut(s) 391
AvaI CYCGRG 1 cut(s) 970
BalI TGGCCA 2 cut(s) 460, 1178
BanII GRGCYC 1 cut(s) 1375
BarI GAAGNNNNNNTAC 2 cut(s) 300, 332
BbsI GAAGAC 1 cut(s) 899
BccI CCATC 3 cut(s) 578, 620, 1384
BciT130I CCWGG 1 cut(s) 639
BciVI GTATCC 1 cut(s) 969
BcnI CCSGG 1 cut(s) 575
BcoDI GTCTC 1 cut(s) 928
BfaI CTAG 5 cut(s) 267, 392, 591, 704, 903
BfuI GTATCC 1 cut(s) 969
BglII AGATCT 1 cut(s) 172
Bme1390I CCNGG 2 cut(s) 575, 639
BmeT110I CYCGRG 1 cut(s) 970
BmiI GGNNCC 1 cut(s) 1374
BmrFI CCNGG 2 cut(s) 575, 639
BmrI ACTGGG 2 cut(s) 549, 846
BmsI GCATC 2 cut(s) 1093, 1371
BmtI GCTAGC 1 cut(s) 395
BmuI ACTGGG 2 cut(s) 549, 846
BpiI GAAGAC 1 cut(s) 899
BpuEI CTTGAG 5 cut(s) 153, 341, 1040, 1169, 1205
BpuMI CCSGG 1 cut(s) 575
BsaJI CCNNGG 3 cut(s) 133, 955, 1089
Bsc4I CCNNNNNNNGG 4 cut(s) 225, 580, 868, 956
Bse1I ACTGG 4 cut(s) 406, 544, 841, 1104
Bse3DI GCAATG 1 cut(s) 288
BseBI CCWGG 1 cut(s) 639
BseDI CCNNGG 3 cut(s) 133, 955, 1089
BseGI GGATG 7 cut(s) 549, 589, 846, 859, 1108, 1362, 1426
BseLI CCNNNNNNNGG 4 cut(s) 225, 580, 868, 956
BseMI GCAATG 1 cut(s) 288
BseNI ACTGG 4 cut(s) 406, 544, 841, 1104
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 3 cut(s) 460, 847, 1178
BsiEI CGRYCG 1 cut(s) 33
BsiHKCI CYCGRG 1 cut(s) 970
BsiSI CCGG 2 cut(s) 386, 575
BslFI GGGAC 1 cut(s) 496
BslI CCNNNNNNNGG 4 cut(s) 225, 580, 868, 956
BsmAI GTCTC 1 cut(s) 928
BsmFI GGGAC 1 cut(s) 496
BsmI GAATGC 1 cut(s) 283
BsnI GGCC 3 cut(s) 460, 847, 1178
BsoBI CYCGRG 1 cut(s) 970
Bsp1286I GDGCHC 1 cut(s) 1375
Bsp143I GATC 7 cut(s) 30, 57, 172, 404, 468, 594, 1308
Bsp19I CCATGG 1 cut(s) 133
BspACI CCGC 2 cut(s) 869, 1409
BspANI GGCC 3 cut(s) 460, 847, 1178
BspHI TCATGA 2 cut(s) 82, 561
BspLI GGNNCC 1 cut(s) 1374
BspOI GCTAGC 1 cut(s) 395
BspPI GGATC 3 cut(s) 412, 602, 1316
BsrDI GCAATG 1 cut(s) 288
BsrI ACTGG 4 cut(s) 406, 544, 841, 1104
BssECI CCNNGG 3 cut(s) 133, 955, 1089
BssMI GATC 7 cut(s) 30, 57, 172, 404, 468, 594, 1308
BssT1I CCWWGG 2 cut(s) 133, 955
Bst2UI CCWGG 1 cut(s) 639
Bst4CI ACNGT 3 cut(s) 335, 523, 610
Bst6I CTCTTC 3 cut(s) 187, 1425, 1518
BstC8I GCNNGC 4 cut(s) 124, 383, 393, 1108
BstDEI CTNAG 1 cut(s) 1405
BstDSI CCRYGG 2 cut(s) 133, 1089
BstEII GGTNACC 1 cut(s) 871
BstENI CCTNNNNNAGG 1 cut(s) 223
BstF5I GGATG 7 cut(s) 549, 589, 846, 859, 1108, 1362, 1426
BstKTI GATC 7 cut(s) 33, 60, 175, 407, 471, 597, 1311
BstMAI GTCTC 1 cut(s) 928
BstMBI GATC 7 cut(s) 30, 57, 172, 404, 468, 594, 1308
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 2 cut(s) 904, 1013
BstNI CCWGG 1 cut(s) 639
BstNSI RCATGY 1 cut(s) 511
BstPI GGTNACC 1 cut(s) 871
BstSCI CCNGG 2 cut(s) 573, 637
BstV2I GAAGAC 1 cut(s) 899
BstX2I RGATCY 2 cut(s) 172, 404
BstXI CCANNNNNNTGG 1 cut(s) 1323
BstYI RGATCY 2 cut(s) 172, 404
BsuI GTATCC 1 cut(s) 969
BsuRI GGCC 3 cut(s) 460, 847, 1178
BtgI CCRYGG 2 cut(s) 133, 1089
BtsCI GGATG 7 cut(s) 549, 589, 846, 859, 1108, 1362, 1426
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 2 cut(s) 105, 834
Cac8I GCNNGC 4 cut(s) 124, 383, 393, 1108
CciI TCATGA 2 cut(s) 82, 561
CseI GACGC 1 cut(s) 904
Csp6I GTAC 5 cut(s) 88, 351, 588, 1396, 1470
CviAII CATG 5 cut(s) 83, 134, 508, 562, 1174
CviQI GTAC 5 cut(s) 88, 351, 588, 1396, 1470
DdeI CTNAG 1 cut(s) 1405
DpnI GATC 7 cut(s) 32, 59, 174, 406, 470, 596, 1310
DpnII GATC 7 cut(s) 30, 57, 172, 404, 468, 594, 1308
DraI TTTAAA 2 cut(s) 208, 484
EaeI YGGCCR 2 cut(s) 458, 1176
Eam1104I CTCTTC 3 cut(s) 187, 1425, 1518
EarI CTCTTC 3 cut(s) 187, 1425, 1518
Eco130I CCWWGG 2 cut(s) 133, 955
Eco24I GRGCYC 1 cut(s) 1375
Eco57I CTGAAG 3 cut(s) 279, 519, 1142
Eco88I CYCGRG 1 cut(s) 970
Eco91I GGTNACC 1 cut(s) 871
EcoNI CCTNNNNNAGG 1 cut(s) 223
EcoO65I GGTNACC 1 cut(s) 871
EcoRII CCWGG 1 cut(s) 637
EcoT14I CCWWGG 2 cut(s) 133, 955
EcoT22I ATGCAT 1 cut(s) 1364
EcoT38I GRGCYC 1 cut(s) 1375
ErhI CCWWGG 2 cut(s) 133, 955
FaeI CATG 5 cut(s) 86, 137, 511, 565, 1177
FalI AAGNNNNNCTT 2 cut(s) 464, 496
FaqI GGGAC 1 cut(s) 496
FatI CATG 5 cut(s) 82, 133, 507, 561, 1173
FauNDI CATATG 1 cut(s) 1358
FokI GGATG 7 cut(s) 556, 596, 853, 866, 1115, 1349, 1433
FriOI GRGCYC 1 cut(s) 1375
FspBI CTAG 5 cut(s) 267, 392, 591, 704, 903
HaeIII GGCC 3 cut(s) 460, 847, 1178
HapII CCGG 2 cut(s) 386, 575
HgaI GACGC 1 cut(s) 904
Hin1II CATG 5 cut(s) 86, 137, 511, 565, 1177
HincII GTYRAC 2 cut(s) 291, 505
HindII GTYRAC 2 cut(s) 291, 505
HindIII AAGCTT 2 cut(s) 52, 1181
HinfI GANTC 6 cut(s) 7, 79, 260, 342, 440, 990
HpaI GTTAAC 1 cut(s) 505
HpaII CCGG 2 cut(s) 386, 575
HphI GGTGA 2 cut(s) 883, 1195
Hpy166II GTNNAC 4 cut(s) 105, 272, 291, 505
Hpy188I TCNGA 5 cut(s) 50, 62, 196, 367, 1161
Hpy188III TCNNGA 8 cut(s) 83, 170, 297, 472, 562, 1019, 1059, 1511
Hpy8I GTNNAC 4 cut(s) 105, 272, 291, 505
Hpy99I CGWCG 1 cut(s) 1520
HpyAV CCTTC 4 cut(s) 65, 140, 730, 1430
HpyCH4III ACNGT 3 cut(s) 335, 523, 610
HpyCH4IV ACGT 3 cut(s) 663, 1518, 1534
HpyCH4V TGCA 8 cut(s) 110, 281, 286, 381, 754, 1007, 1211, 1362
HpyF10VI GCNNNNNNNGC 2 cut(s) 904, 1013
HpyF3I CTNAG 1 cut(s) 1405
HpySE526I ACGT 3 cut(s) 663, 1518, 1534
Hsp92II CATG 5 cut(s) 86, 137, 511, 565, 1177
KspAI GTTAAC 1 cut(s) 505
Kzo9I GATC 7 cut(s) 30, 57, 172, 404, 468, 594, 1308
LmnI GCTCC 4 cut(s) 62, 388, 655, 1378
LweI GCATC 2 cut(s) 1093, 1371
MaeI CTAG 5 cut(s) 267, 392, 591, 704, 903
MaeII ACGT 3 cut(s) 663, 1518, 1534
MaeIII GTNAC 4 cut(s) 238, 569, 856, 871
MalI GATC 7 cut(s) 32, 59, 174, 406, 470, 596, 1310
MboI GATC 7 cut(s) 30, 57, 172, 404, 468, 594, 1308
MflI RGATCY 2 cut(s) 172, 404
MhlI GDGCHC 1 cut(s) 1375
MlsI TGGCCA 2 cut(s) 460, 1178
MluCI AATT 8 cut(s) 113, 199, 312, 578, 744, 823, 1327, 1461
MluNI TGGCCA 2 cut(s) 460, 1178
MlyI GAGTC 2 cut(s) 449, 999
Mox20I TGGCCA 2 cut(s) 460, 1178
Mph1103I ATGCAT 1 cut(s) 1364
MscI TGGCCA 2 cut(s) 460, 1178
MseI TTAA 9 cut(s) 207, 432, 483, 504, 656, 822, 828, 1164, 1464
MslI CAYNNNNRTG 1 cut(s) 839
Msp20I TGGCCA 2 cut(s) 460, 1178
MspI CCGG 2 cut(s) 386, 575
MspR9I CCNGG 2 cut(s) 575, 639
Mva1269I GAATGC 1 cut(s) 283
MvaI CCWGG 1 cut(s) 639
MwoI GCNNNNNNNGC 2 cut(s) 904, 1013
NciI CCSGG 1 cut(s) 575
NcoI CCATGG 1 cut(s) 133
NdeI CATATG 1 cut(s) 1358
NdeII GATC 7 cut(s) 30, 57, 172, 404, 468, 594, 1308
NheI GCTAGC 1 cut(s) 391
NlaIII CATG 5 cut(s) 86, 137, 511, 565, 1177
NlaIV GGNNCC 1 cut(s) 1374
NmuCI GTSAC 2 cut(s) 569, 871
NsiI ATGCAT 1 cut(s) 1364
NspI RCATGY 1 cut(s) 511
PaeR7I CTCGAG 1 cut(s) 970
PagI TCATGA 2 cut(s) 82, 561
PciI ACATGT 1 cut(s) 507
PcsI WCGNNNNNNNCGW 2 cut(s) 74, 1064
PctI GAATGC 1 cut(s) 283
PfeI GAWTC 4 cut(s) 7, 79, 260, 342
Ple19I CGATCG 1 cut(s) 33
PleI GAGTC 2 cut(s) 448, 998
PpsI GAGTC 2 cut(s) 448, 998
PscI ACATGT 1 cut(s) 507
PsiI TTATAA 1 cut(s) 224
Psp1406I AACGTT 1 cut(s) 663
Psp6I CCWGG 1 cut(s) 637
PspEI GGTNACC 1 cut(s) 871
PspGI CCWGG 1 cut(s) 637
PspN4I GGNNCC 1 cut(s) 1374
PspXI VCTCGAGB 1 cut(s) 970
PsuI RGATCY 2 cut(s) 172, 404
PvuI CGATCG 1 cut(s) 33
RsaI GTAC 5 cut(s) 89, 352, 589, 1397, 1471
RsaNI GTAC 5 cut(s) 88, 351, 588, 1396, 1470
RseI CAYNNNNRTG 1 cut(s) 839
SaqAI TTAA 9 cut(s) 207, 432, 483, 504, 656, 822, 828, 1164, 1464
Sau3AI GATC 7 cut(s) 30, 57, 172, 404, 468, 594, 1308
SchI GAGTC 2 cut(s) 449, 999
ScrFI CCNGG 2 cut(s) 575, 639
SduI GDGCHC 1 cut(s) 1375
SfaNI GCATC 2 cut(s) 1093, 1371
Sfr274I CTCGAG 1 cut(s) 970
SlaI CTCGAG 1 cut(s) 970
SmiMI CAYNNNNRTG 1 cut(s) 839
SmlI CTYRAG 6 cut(s) 168, 320, 970, 1019, 1148, 1184
SmoI CTYRAG 6 cut(s) 168, 320, 970, 1019, 1148, 1184
Sse9I AATT 8 cut(s) 113, 199, 312, 578, 744, 823, 1327, 1461
SsiI CCGC 2 cut(s) 869, 1409
SspMI CTAG 5 cut(s) 267, 392, 591, 704, 903
StyD4I CCNGG 2 cut(s) 573, 637
StyI CCWWGG 2 cut(s) 133, 955
TaaI ACNGT 3 cut(s) 335, 523, 610
TaiI ACGT 3 cut(s) 666, 1521, 1537
TaqI TCGA 4 cut(s) 77, 805, 971, 1287
TasI AATT 8 cut(s) 113, 199, 312, 578, 744, 823, 1327, 1461
TatI WGTACW 2 cut(s) 87, 1469
TfiI GAWTC 4 cut(s) 7, 79, 260, 342
Tru1I TTAA 9 cut(s) 207, 432, 483, 504, 656, 822, 828, 1164, 1464
Tru9I TTAA 9 cut(s) 207, 432, 483, 504, 656, 822, 828, 1164, 1464
TscAI CASTG 2 cut(s) 112, 841
TseFI GTSAC 2 cut(s) 569, 871
Tsp45I GTSAC 2 cut(s) 569, 871
TspDTI ATGAA 5 cut(s) 17, 71, 550, 674, 1506
TspGWI ACGGA 2 cut(s) 83, 1284
TspRI CASTG 2 cut(s) 112, 841
XagI CCTNNNNNAGG 1 cut(s) 223
XapI RAATTY 2 cut(s) 113, 1327
XceI RCATGY 1 cut(s) 511
XhoI CTCGAG 1 cut(s) 970
XspI CTAG 5 cut(s) 267, 392, 591, 704, 903
Zsp2I ATGCAT 1 cut(s) 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.