Prupe.6G294600_v2.0.a1

Transmembrane protein 87B-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27014262 .. 27017408
3147 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G294600.1

Sequence Viewer

Length: 1575 bp
ATGGAACAGAGATTGTTGTGGTGTGAAAAGGGCTCGCTTTTAGGGTTCATATTTGGGGTTATTTTTATTATATGCAACGAATGCATCGTACAGTGTAATGCTTCAATCCACGAGTACAGAAATGAAGCTTTCAGTCCTCAGTCAAACGCCTTCTTCTTCCATGGCGGCAGCGAGGGCCTCTACGCTTCTAAGGTCCATGGTTCTGCTGATTCTTCGTCCACAGACAATCATCACCTCAAGGGCAAGTCCTTCATCAGGTTTGAGAGTGTCACTTTTGTGAGGACTAAAGAGTCTGCCAATAAGCAAAGTGAAATGCAGCAGAATACTGGTTTGGTGGAAGCTATCATTCTTGAAGTGAAGGACAGGGTTCGGATTGGAGCTTCTTTCGTCCAATCCGAAAAGATATGCTGCACCAGAAATCTTTCGAATTCTGGATACTGCACGGTGGGAGAGGTTGTTATCCACAAAAATCCAGACAACCCTGACTGGCCTGTGCGCATCAAAACCTTTTTTAATGGAAAGGCTGAAGAGGCCACAATGGATACTAAGTCAATTAATATCAATTGTTCCGGAATGTACTACCTTTATTTTATGTTCTGTGATCCGCAACTCAAGGGCACATTGATTAAAGGAAGGACCGATTGGAGAAACCCAGATGGTTATTTGCCTGGGAAGATGGCTCCTTTGATGACATTATATGGCTTTATGTCTTTAGCTTACCTTGTGCTTGGCCTAGCCTGGTTTCTGAGGTTTGTTCAGTTTTGGAAGGATATTATACAATTGCACTACCATATTACAGCAGTGATTGCTCTTGGAATGTGTGAAATGGCTGTGTGGTACTTTGAGTATGCCAATTTTAATTCAACTGGAATCAGACCTATGGGCATTACATTATGGGCTGTAACCTTTAGCGCTGTCAAGAAGACTCTTTCTCGCCTTCTTCTTTTGGTAGTTTCCATGGGCTTTGGCGTCGTGAAGCCTACACTGGGTGGTATAACACCAAAAGTATTTCTTCTTGGTCTGGTATATTTCGTGGCATCAGAAGCACTTGAGCTTGTTGAACATTTGGGGAACATTAATGATTTTTCTGGAAAAACAAAGTTGTTTTTGGTTCTACCTGTTGCCTTCTTAGATTCATGGTTTATTCTATGGATTTTCTCATCGTTATCAAAAACTTTAGAGAAACTTCAGATCAGGAGAAACATGGCTAAATTGGAACTATACCGAAAATTTACCAACTATCTCGCAATTTTTGTGCTTCTCTCGGTTGCTTGGATTGGCTTTGAGCTATATTTCAATGCAACGGATCCTCTGAGTGAGTATTGGCAAATTGCTTGGATTATTCCTGCATTCTGGACTCTGCTTGCATATGCTCTCTTGGCGGTGATATGTATCCTTTGGGCTCCTTCACGTAACCCAACTAGATATGCATACTTGGAGGAAGCAGGAGACGATTTTGATGAGGAGGGCATCTCGTTAACAAGTGGTGCTTTGAAGGTGAGTGGAGATGTGACGGCCATGCGAGAATATGACAATGTGCTTGCTGAAGATCTGGAGGAGGATAAGCGAGAATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

525

Amino Acids

59.46

Weight (kDa)

6.06

Isoelectric Point (pI)

34.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 289
Acc16I TGCGCA 1 cut(s) 497
AccIII TCCGGA 1 cut(s) 569
AciI CCGC 3 cut(s) 165, 605, 1382
AclWI GGATC 3 cut(s) 596, 1301, 1314
AcoI YGGCCR 1 cut(s) 1515
AcsI RAATTY 2 cut(s) 427, 1229
AcuI CTGAAG 3 cut(s) 546, 1172, 1566
AcyI GRCGYC 1 cut(s) 969
AdeI CACNNNGTG 1 cut(s) 989
AfaI GTAC 4 cut(s) 90, 116, 578, 839
AfeI AGCGCT 1 cut(s) 913
AfiI CCNNNNNNNGG 2 cut(s) 255, 986
AgsI TTSAA 6 cut(s) 105, 353, 864, 1061, 1297, 1495
AjnI CCWGG 2 cut(s) 667, 737
AjuI GAANNNNNNNTTGG 4 cut(s) 314, 346, 625, 657
AleI CACNNNNGTG 1 cut(s) 275
AluBI AGCT 6 cut(s) 128, 341, 380, 716, 1054, 1288
AluI AGCT 6 cut(s) 128, 341, 380, 716, 1054, 1288
Alw26I GTCTC 1 cut(s) 1443
AlwI GGATC 3 cut(s) 596, 1301, 1314
Aor13HI TCCGGA 1 cut(s) 569
Aor51HI AGCGCT 1 cut(s) 913
AoxI GGCC 5 cut(s) 175, 488, 531, 730, 1515
ApeKI GCWGC 3 cut(s) 168, 316, 408
ApoI RAATTY 2 cut(s) 427, 1229
AseI ATTAAT 2 cut(s) 555, 1077
Asp700I GAANNNNTTC 1 cut(s) 421
AspLEI GCGC 2 cut(s) 498, 914
AspS9I GGNCC 3 cut(s) 175, 193, 636
AsuHPI GGTGA 3 cut(s) 224, 1396, 1510
AsuII TTCGAA 1 cut(s) 425
AvaII GGWCC 2 cut(s) 193, 636
BaeGI GKGCMC 1 cut(s) 620
BamHI GGATCC 1 cut(s) 1306
BanII GRGCYC 2 cut(s) 35, 1405
BauI CACGAG 1 cut(s) 110
BbsI GAAGAC 1 cut(s) 929
BbvI GCAGC 3 cut(s) 180, 328, 395
BccI CCATC 2 cut(s) 650, 670
BceAI ACGGC 1 cut(s) 1530
BciT130I CCWGG 2 cut(s) 669, 739
BciVI GTATCC 3 cut(s) 428, 535, 1403
BcoDI GTCTC 1 cut(s) 1443
BfaI CTAG 2 cut(s) 734, 1422
BfoI RGCGCY 1 cut(s) 915
BfuI GTATCC 3 cut(s) 428, 535, 1403
BglII AGATCT 1 cut(s) 1549
BisI GCNGC 4 cut(s) 166, 169, 317, 409
BlsI GCNGC 4 cut(s) 167, 170, 318, 410
Bme1390I CCNGG 2 cut(s) 669, 739
Bme18I GGWCC 2 cut(s) 193, 636
BmgT120I GGNCC 3 cut(s) 175, 193, 636
BmiI GGNNCC 3 cut(s) 681, 1308, 1404
BmrFI CCNGG 2 cut(s) 669, 739
BmrI ACTGGG 1 cut(s) 995
BmsI GCATC 4 cut(s) 93, 507, 1046, 1479
BmuI ACTGGG 1 cut(s) 995
BpiI GAAGAC 1 cut(s) 929
BplI GAGNNNNNCTC 2 cut(s) 1457, 1489
BpmI CTGGAG 1 cut(s) 1574
Bpu14I TTCGAA 1 cut(s) 425
BpuEI CTTGAG 3 cut(s) 221, 596, 1070
BsaAI YACGTR 1 cut(s) 1412
BsaBI GATNNNNATC 1 cut(s) 1391
BsaHI GRCGYC 1 cut(s) 969
BsaJI CCNNGG 4 cut(s) 160, 196, 668, 957
BsaWI WCCGGW 1 cut(s) 569
BsaXI ACNNNNNCTCC 2 cut(s) 441, 471
Bsc4I CCNNNNNNNGG 2 cut(s) 255, 986
Bse1I ACTGG 4 cut(s) 331, 491, 871, 990
Bse8I GATNNNNATC 1 cut(s) 1391
BseAI TCCGGA 1 cut(s) 569
BseBI CCWGG 2 cut(s) 669, 739
BseDI CCNNGG 4 cut(s) 160, 196, 668, 957
BseJI GATNNNNATC 1 cut(s) 1391
BseLI CCNNNNNNNGG 2 cut(s) 255, 986
BseMII CTCAG 3 cut(s) 152, 737, 1304
BseNI ACTGG 4 cut(s) 331, 491, 871, 990
BseRI GAGGAG 2 cut(s) 1478, 1571
BseSI GKGCMC 1 cut(s) 620
BseXI GCAGC 3 cut(s) 180, 328, 395
BsgI GTGCAG 2 cut(s) 394, 424
BshFI GGCC 5 cut(s) 177, 490, 533, 732, 1517
BsiSI CCGG 1 cut(s) 570
BslI CCNNNNNNNGG 2 cut(s) 255, 986
BsmAI GTCTC 1 cut(s) 1443
BsmBI CGTCTC 1 cut(s) 1443
BsmI GAATGC 2 cut(s) 86, 1349
BsnI GGCC 5 cut(s) 177, 490, 533, 732, 1517
Bsp119I TTCGAA 1 cut(s) 425
Bsp1286I GDGCHC 3 cut(s) 35, 620, 1405
Bsp13I TCCGGA 1 cut(s) 569
Bsp143I GATC 4 cut(s) 601, 1191, 1306, 1549
Bsp19I CCATGG 3 cut(s) 160, 196, 957
BspACI CCGC 3 cut(s) 165, 605, 1382
BspANI GGCC 5 cut(s) 177, 490, 533, 732, 1517
BspCNI CTCAG 3 cut(s) 151, 738, 1305
BspEI TCCGGA 1 cut(s) 569
BspLI GGNNCC 3 cut(s) 681, 1308, 1404
BspPI GGATC 3 cut(s) 596, 1301, 1314
BspT104I TTCGAA 1 cut(s) 425
BsrI ACTGG 4 cut(s) 331, 491, 871, 990
BssECI CCNNGG 4 cut(s) 160, 196, 668, 957
BssMI GATC 4 cut(s) 601, 1191, 1306, 1549
BssNI GRCGYC 1 cut(s) 969
BssSI CACGAG 1 cut(s) 110
BssT1I CCWWGG 3 cut(s) 160, 196, 957
Bst2BI CACGAG 1 cut(s) 110
Bst2UI CCWGG 2 cut(s) 669, 739
Bst4CI ACNGT 2 cut(s) 93, 445
Bst6I CTCTTC 1 cut(s) 522
BstACI GRCGYC 1 cut(s) 969
BstAPI GCANNNNNTGC 2 cut(s) 81, 806
BstBAI YACGTR 1 cut(s) 1412
BstBI TTCGAA 1 cut(s) 425
BstC8I GCNNGC 3 cut(s) 35, 1365, 1542
BstDEI CTNAG 6 cut(s) 138, 189, 546, 746, 1129, 1313
BstDSI CCRYGG 3 cut(s) 160, 196, 957
BstENI CCTNNNNNAGG 1 cut(s) 253
BstH2I RGCGCY 1 cut(s) 915
BstHHI GCGC 2 cut(s) 498, 914
BstKTI GATC 4 cut(s) 604, 1194, 1309, 1552
BstMAI GTCTC 1 cut(s) 1443
BstMBI GATC 4 cut(s) 601, 1191, 1306, 1549
BstMWI GCNNNNNNNGC 6 cut(s) 81, 174, 530, 806, 1043, 1379
BstNI CCWGG 2 cut(s) 669, 739
BstSCI CCNGG 2 cut(s) 667, 737
BstSLI GKGCMC 1 cut(s) 620
BstV1I GCAGC 3 cut(s) 180, 328, 395
BstV2I GAAGAC 1 cut(s) 929
BstX2I RGATCY 2 cut(s) 1306, 1549
BstYI RGATCY 2 cut(s) 1306, 1549
BsuI GTATCC 3 cut(s) 428, 535, 1403
BsuRI GGCC 5 cut(s) 177, 490, 533, 732, 1517
BtgI CCRYGG 3 cut(s) 160, 196, 957
BtsI GCAGTG 1 cut(s) 807
BtsIMutI CAGTG 3 cut(s) 98, 807, 983
Cac8I GCNNGC 3 cut(s) 35, 1365, 1542
CfoI GCGC 2 cut(s) 498, 914
Cfr13I GGNCC 3 cut(s) 175, 193, 636
CseI GACGC 1 cut(s) 958
Csp6I GTAC 4 cut(s) 89, 115, 577, 838
CviAII CATG 6 cut(s) 161, 197, 958, 1137, 1204, 1519
CviQI GTAC 4 cut(s) 89, 115, 577, 838
DdeI CTNAG 6 cut(s) 138, 189, 546, 746, 1129, 1313
DpnI GATC 4 cut(s) 603, 1193, 1308, 1551
DpnII GATC 4 cut(s) 601, 1191, 1306, 1549
DraIII CACNNNGTG 1 cut(s) 989
DrdI GACNNNNNNGTC 1 cut(s) 289
DseDI GACNNNNNNGTC 1 cut(s) 289
EaeI YGGCCR 1 cut(s) 1515
Eam1104I CTCTTC 1 cut(s) 522
EarI CTCTTC 1 cut(s) 522
Eco130I CCWWGG 3 cut(s) 160, 196, 957
Eco24I GRGCYC 2 cut(s) 35, 1405
Eco47I GGWCC 2 cut(s) 193, 636
Eco47III AGCGCT 1 cut(s) 913
Eco57I CTGAAG 3 cut(s) 546, 1172, 1566
EcoNI CCTNNNNNAGG 1 cut(s) 253
EcoO109I RGGNCCY 1 cut(s) 175
EcoRI GAATTC 1 cut(s) 427
EcoRII CCWGG 2 cut(s) 667, 737
EcoT14I CCWWGG 3 cut(s) 160, 196, 957
EcoT22I ATGCAT 2 cut(s) 86, 1432
EcoT38I GRGCYC 2 cut(s) 35, 1405
ErhI CCWWGG 3 cut(s) 160, 196, 957
Esp3I CGTCTC 1 cut(s) 1443
FaeI CATG 6 cut(s) 164, 200, 961, 1140, 1207, 1522
FalI AAGNNNNNCTT 4 cut(s) 996, 1028, 1474, 1506
FatI CATG 6 cut(s) 160, 196, 957, 1136, 1203, 1518
FauNDI CATATG 1 cut(s) 1369
Fnu4HI GCNGC 4 cut(s) 166, 169, 317, 409
FriOI GRGCYC 2 cut(s) 35, 1405
Fsp4HI GCNGC 4 cut(s) 166, 169, 317, 409
FspAI RTGCGCAY 1 cut(s) 497
FspBI CTAG 2 cut(s) 734, 1422
FspI TGCGCA 1 cut(s) 497
GlaI GCGC 2 cut(s) 497, 913
GluI GCNGC 4 cut(s) 166, 169, 317, 409
GsuI CTGGAG 1 cut(s) 1574
HaeII RGCGCY 1 cut(s) 915
HaeIII GGCC 5 cut(s) 177, 490, 533, 732, 1517
HapII CCGG 1 cut(s) 570
HgaI GACGC 1 cut(s) 958
HhaI GCGC 2 cut(s) 498, 914
Hin1I GRCGYC 1 cut(s) 969
Hin1II CATG 6 cut(s) 164, 200, 961, 1140, 1207, 1522
Hin6I GCGC 2 cut(s) 496, 912
HinP1I GCGC 2 cut(s) 496, 912
HincII GTYRAC 1 cut(s) 1479
HindII GTYRAC 1 cut(s) 1479
HindIII AAGCTT 1 cut(s) 126
HinfI GANTC 6 cut(s) 209, 290, 870, 925, 1133, 1357
HpaI GTTAAC 1 cut(s) 1479
HpaII CCGG 1 cut(s) 570
HphI GGTGA 3 cut(s) 224, 1396, 1510
Hpy166II GTNNAC 2 cut(s) 219, 1479
Hpy188I TCNGA 7 cut(s) 372, 397, 747, 875, 1042, 1191, 1314
Hpy8I GTNNAC 2 cut(s) 219, 1479
Hpy99I CGWCG 1 cut(s) 974
HpyAV CCTTC 9 cut(s) 160, 259, 352, 627, 760, 947, 1135, 1416, 1489
HpyCH4III ACNGT 2 cut(s) 93, 445
HpyCH4IV ACGT 1 cut(s) 1411
HpyF10VI GCNNNNNNNGC 6 cut(s) 81, 174, 530, 806, 1043, 1379
HpyF3I CTNAG 6 cut(s) 138, 189, 546, 746, 1129, 1313
HpySE526I ACGT 1 cut(s) 1411
Hsp92I GRCGYC 1 cut(s) 969
Hsp92II CATG 6 cut(s) 164, 200, 961, 1140, 1207, 1522
HspAI GCGC 2 cut(s) 496, 912
Kpn2I TCCGGA 1 cut(s) 569
KspAI GTTAAC 1 cut(s) 1479
Kzo9I GATC 4 cut(s) 601, 1191, 1306, 1549
LmnI GCTCC 3 cut(s) 377, 685, 1408
Lsp1109I GCAGC 3 cut(s) 180, 328, 395
LweI GCATC 4 cut(s) 93, 507, 1046, 1479
MaeI CTAG 2 cut(s) 734, 1422
MaeII ACGT 1 cut(s) 1411
MaeIII GTNAC 4 cut(s) 268, 901, 1412, 1510
MalI GATC 4 cut(s) 603, 1193, 1308, 1551
MboI GATC 4 cut(s) 601, 1191, 1306, 1549
MboII GAAGA 9 cut(s) 145, 148, 204, 539, 685, 932, 934, 1004, 1559
MfeI CAATTG 2 cut(s) 562, 779
MflI RGATCY 2 cut(s) 1306, 1549
MhlI GDGCHC 3 cut(s) 35, 620, 1405
MlyI GAGTC 3 cut(s) 299, 919, 1351
Mph1103I ATGCAT 2 cut(s) 86, 1432
MroI TCCGGA 1 cut(s) 569
MroXI GAANNNNTTC 1 cut(s) 421
MseI TTAA 6 cut(s) 513, 555, 627, 858, 1077, 1478
MslI CAYNNNNRTG 1 cut(s) 275
MspI CCGG 1 cut(s) 570
MspR9I CCNGG 2 cut(s) 669, 739
MunI CAATTG 2 cut(s) 562, 779
Mva1269I GAATGC 2 cut(s) 86, 1349
MvaI CCWGG 2 cut(s) 669, 739
MwoI GCNNNNNNNGC 6 cut(s) 81, 174, 530, 806, 1043, 1379
NcoI CCATGG 3 cut(s) 160, 196, 957
NdeI CATATG 1 cut(s) 1369
NdeII GATC 4 cut(s) 601, 1191, 1306, 1549
NlaIII CATG 6 cut(s) 164, 200, 961, 1140, 1207, 1522
NlaIV GGNNCC 3 cut(s) 681, 1308, 1404
NmuCI GTSAC 2 cut(s) 268, 1510
NsbI TGCGCA 1 cut(s) 497
NsiI ATGCAT 2 cut(s) 86, 1432
NspV TTCGAA 1 cut(s) 425
OliI CACNNNNGTG 1 cut(s) 275
PcsI WCGNNNNNNNCGW 2 cut(s) 84, 393
PctI GAATGC 2 cut(s) 86, 1349
PdmI GAANNNNTTC 1 cut(s) 421
PfeI GAWTC 3 cut(s) 209, 870, 1133
PkrI GCNGC 4 cut(s) 167, 170, 318, 410
PleI GAGTC 3 cut(s) 298, 919, 1351
PpsI GAGTC 3 cut(s) 298, 919, 1351
Ppu21I YACGTR 1 cut(s) 1412
PshBI ATTAAT 2 cut(s) 555, 1077
Psp6I CCWGG 2 cut(s) 667, 737
PspGI CCWGG 2 cut(s) 667, 737
PspN4I GGNNCC 3 cut(s) 681, 1308, 1404
PspPI GGNCC 3 cut(s) 175, 193, 636
PsuI RGATCY 2 cut(s) 1306, 1549
RsaI GTAC 4 cut(s) 90, 116, 578, 839
RsaNI GTAC 4 cut(s) 89, 115, 577, 838
RseI CAYNNNNRTG 1 cut(s) 275
SaqAI TTAA 6 cut(s) 513, 555, 627, 858, 1077, 1478
SatI GCNGC 4 cut(s) 166, 169, 317, 409
Sau3AI GATC 4 cut(s) 601, 1191, 1306, 1549
Sau96I GGNCC 3 cut(s) 175, 193, 636
SchI GAGTC 3 cut(s) 299, 919, 1351
ScrFI CCNGG 2 cut(s) 669, 739
SduI GDGCHC 3 cut(s) 35, 620, 1405
SfaNI GCATC 4 cut(s) 93, 507, 1046, 1479
SfuI TTCGAA 1 cut(s) 425
SinI GGWCC 2 cut(s) 193, 636
SmiMI CAYNNNNRTG 1 cut(s) 275
SmlI CTYRAG 3 cut(s) 236, 611, 1049
SmoI CTYRAG 3 cut(s) 236, 611, 1049
SsiI CCGC 3 cut(s) 165, 605, 1382
SspMI CTAG 2 cut(s) 734, 1422
StyD4I CCNGG 2 cut(s) 667, 737
StyI CCWWGG 3 cut(s) 160, 196, 957
TaaI ACNGT 2 cut(s) 93, 445
TaiI ACGT 1 cut(s) 1414
TaqI TCGA 1 cut(s) 425
TaqII GACCGA 1 cut(s) 653
TatI WGTACW 2 cut(s) 114, 576
TauI GCSGC 1 cut(s) 168
TfiI GAWTC 3 cut(s) 209, 870, 1133
Tru1I TTAA 6 cut(s) 513, 555, 627, 858, 1077, 1478
Tru9I TTAA 6 cut(s) 513, 555, 627, 858, 1077, 1478
TscAI CASTG 3 cut(s) 98, 807, 990
TseFI GTSAC 2 cut(s) 268, 1510
TseI GCWGC 3 cut(s) 168, 316, 408
Tsp45I GTSAC 2 cut(s) 268, 1510
TspDTI ATGAA 4 cut(s) 37, 138, 241, 1125
TspGWI ACGGA 1 cut(s) 1319
TspRI CASTG 3 cut(s) 98, 807, 990
VpaK11BI GGWCC 2 cut(s) 193, 636
VspI ATTAAT 2 cut(s) 555, 1077
XagI CCTNNNNNAGG 1 cut(s) 253
XapI RAATTY 2 cut(s) 427, 1229
XmnI GAANNNNTTC 1 cut(s) 421
XspI CTAG 2 cut(s) 734, 1422
Zsp2I ATGCAT 2 cut(s) 86, 1432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.