Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003983

Physical Location & Seq

Genomic Coordinates Reverse (-)

28023627 .. 28024860

Gene Structure 1234 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G74590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 699 bp

ATGGAGGAGAAGAAGAGCAAAGTGATATTACATGGGACGTGGATAAGCACATACTCAAAGAGGGTCGAAATCGCTCTTAAACTCAAGGGTGTACTCTACGAGTACCTCGAAGAAGATCTTCAGAACAAAAGTGAATCGCTGATTCAACTCAACCCGGTGCACAAGAAGATTCCTGTTCTTGTCCATGATGGGAAACCAGTGGCTGAATCACTTGTGATTCTTGAATATATCGATGAGACGTGGACAAACTCTCCTCGTTTCTTCCCAGAGGATCCTTATGAAAGGGCCCAGGTCCGGTTCTGGGTCAGCTACATCAACCAACAGGTGTTTGAGGTCATGGGTCAAGTCATGTCCCAGGAGGGTGAAGCTCAAGCAAAGTCTGTAGAAGAGGCAAGAAAAAGATTCAAAGTTCTTGATGAGGGACTCAAGAAGCATTTCCCGAATAAAAACATCAGAAGGAATGATGATGTTGGGCTTTTGGAAATCACCATCATTGCTACTCTCGGAGGCTACAAAGCTCATCGTGAAGCAATCGGTGTAGACATAATTGGTCCAGTGAACACTCCGACTTTATACAACTGGATAGAGCGCCTGCAAGATCTAAGTGTGATAAAAGAAGTCGAAGTGCCTCATGATACGTTGGTGACATTTATCCAGAAGTATAGACAAAAGTGTCTCCAGCAGGCTGCAAATGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_N GST_N_3

Protein Analysis

232

Amino Acids

26.8

Weight (kDa)

6.34

Isoelectric Point (pI)

39.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GST_N	PF02798	8 - 79	4.7e-17	Glutathione S-transferase, N-terminal domain
GST_N_3	PF13417	10 - 80	5.7e-14	Glutathione S-transferase, N-terminal domain
GST_N_2	PF13409	16 - 80	2.5e-14	Glutathione S-transferase, N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003983)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74590
fragaria_vesca	FvH4_5g15000 FvH4_5g15001
prunus_persica	Prupe.1G274400_v2.0.a1 Prupe.5G192700_v2.0.a1
pyrus_communis	pycom06g17080
rosa_chinensis	RchiOBHm_Chr4g0439891 RchiOBHm_Chr7g0181301 RchiOBHm_Chr7g0181321
rosa_laevigata	RLG00000005199 RLG00000005200 RLG00000006229
rosa_multiflora	Rmu_sc0001147.1_g000005 Rmu_sc0009047.1_g000005 Rmu_sc0016669.1_g000002 Rmu_sc0016669.1_g000003
rosa_roxburghii	Rroxscaffold_3G00272140 Rroxscaffold_3G00272150 Rroxscaffold_5G00380820
rosa_rugosa	Rorug04G0322100 Rorug05G0264100.1 Rorug06G0440100 Rorug06G0440200
rosa_samantha	Rh4AG373100 Rh7AG042100 Rh7BG040900 Rh7BG041100 Rh7CG043300 Rh7CG043400 Rh7DG042000
rosa_wichuraiana	Rw4G031900 Rw7G003460 Rw7G003470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	672
AccI	GTMKAC	1 cut(s)	540
AclWI	GGATC	2 cut(s)	266, 279
AcuI	CTGAAG	1 cut(s)	104
AfaI	GTAC	2 cut(s)	93, 104
AfiI	CCNNNNNNNGG	2 cut(s)	294, 301
AgsI	TTSAA	3 cut(s)	146, 224, 406
AjiI	CACGTC	2 cut(s)	39, 240
AjnI	CCWGG	2 cut(s)	288, 354
AluBI	AGCT	3 cut(s)	309, 368, 518
AluI	AGCT	3 cut(s)	309, 368, 518
Alw21I	GWGCWC	1 cut(s)	162
Alw26I	GTCTC	2 cut(s)	230, 680
Alw44I	GTGCAC	1 cut(s)	158
AlwI	GGATC	2 cut(s)	266, 279
AlwNI	CAGNNNCTG	1 cut(s)	203
AoxI	GGCC	1 cut(s)	285
ApaI	GGGCCC	1 cut(s)	289
ApaLI	GTGCAC	1 cut(s)	158
ApeKI	GCWGC	1 cut(s)	686
Asp700I	GAANNNNTTC	2 cut(s)	117, 434
AspLEI	GCGC	1 cut(s)	591
AspS9I	GGNCC	4 cut(s)	285, 286, 292, 551
AsuC2I	CCSGG	1 cut(s)	155
AsuHPI	GGTGA	3 cut(s)	374, 478, 655
AvaII	GGWCC	2 cut(s)	292, 551
BaeGI	GKGCMC	2 cut(s)	162, 289
BaeI	ACNNNNGTAYC	2 cut(s)	627, 660
BamHI	GGATCC	1 cut(s)	271
BanII	GRGCYC	1 cut(s)	289
Bbv12I	GWGCWC	1 cut(s)	162
BbvI	GCAGC	1 cut(s)	673
BccI	CCATC	2 cut(s)	182, 497
BciT130I	CCWGG	2 cut(s)	290, 356
BcnI	CCSGG	1 cut(s)	155
BcoDI	GTCTC	2 cut(s)	230, 680
BfmI	CTRYAG	1 cut(s)	381
BfoI	RGCGCY	1 cut(s)	592
BglII	AGATCT	2 cut(s)	115, 598
BisI	GCNGC	1 cut(s)	687
BlsI	GCNGC	1 cut(s)	688
Bme1390I	CCNGG	3 cut(s)	155, 290, 356
Bme18I	GGWCC	2 cut(s)	292, 551
BmgBI	CACGTC	2 cut(s)	39, 240
BmgT120I	GGNCC	4 cut(s)	285, 286, 292, 551
BmiI	GGNNCC	2 cut(s)	273, 287
BmrFI	CCNGG	3 cut(s)	155, 290, 356
BpmI	CTGGAG	1 cut(s)	662
BpuEI	CTTGAG	3 cut(s)	68, 354, 410
BpuMI	CCSGG	1 cut(s)	155
Bsa29I	ATCGAT	1 cut(s)	231
BsaJI	CCNNGG	2 cut(s)	288, 354
BsaWI	WCCGGW	1 cut(s)	294
BsaXI	ACNNNNNCTCC	2 cut(s)	235, 265
Bsc4I	CCNNNNNNNGG	2 cut(s)	294, 301
Bse1I	ACTGG	3 cut(s)	197, 554, 584
Bse3DI	GCAATG	1 cut(s)	492
BseBI	CCWGG	2 cut(s)	290, 356
BseCI	ATCGAT	1 cut(s)	231
BseDI	CCNNGG	2 cut(s)	288, 354
BseLI	CCNNNNNNNGG	2 cut(s)	294, 301
BseMI	GCAATG	1 cut(s)	492
BseNI	ACTGG	3 cut(s)	197, 554, 584
BseRI	GAGGAG	2 cut(s)	20, 243
BseSI	GKGCMC	2 cut(s)	162, 289
BseXI	GCAGC	1 cut(s)	673
BshFI	GGCC	1 cut(s)	287
BshVI	ATCGAT	1 cut(s)	231
BsiHKAI	GWGCWC	1 cut(s)	162
BsiSI	CCGG	2 cut(s)	155, 295
BslFI	GGGAC	3 cut(s)	49, 337, 435
BslI	CCNNNNNNNGG	2 cut(s)	294, 301
BsmAI	GTCTC	2 cut(s)	230, 680
BsmBI	CGTCTC	1 cut(s)	230
BsmFI	GGGAC	3 cut(s)	49, 337, 435
BsnI	GGCC	1 cut(s)	287
Bsp120I	GGGCCC	1 cut(s)	285
Bsp1286I	GDGCHC	2 cut(s)	162, 289
Bsp143I	GATC	3 cut(s)	115, 271, 598
BspANI	GGCC	1 cut(s)	287
BspDI	ATCGAT	1 cut(s)	231
BspHI	TCATGA	1 cut(s)	631
BspLI	GGNNCC	2 cut(s)	273, 287
BspPI	GGATC	2 cut(s)	266, 279
BspQI	GCTCTTC	1 cut(s)	8
BsrDI	GCAATG	1 cut(s)	492
BsrI	ACTGG	3 cut(s)	197, 554, 584
BssECI	CCNNGG	2 cut(s)	288, 354
BssMI	GATC	3 cut(s)	115, 271, 598
Bst2UI	CCWGG	2 cut(s)	290, 356
Bst6I	CTCTTC	2 cut(s)	8, 381
BstC8I	GCNNGC	2 cut(s)	593, 684
BstDEI	CTNAG	1 cut(s)	602
BstH2I	RGCGCY	1 cut(s)	592
BstHHI	GCGC	1 cut(s)	591
BstKTI	GATC	3 cut(s)	118, 274, 601
BstMAI	GTCTC	2 cut(s)	230, 680
BstMBI	GATC	3 cut(s)	115, 271, 598
BstMWI	GCNNNNNNNGC	1 cut(s)	692
BstNI	CCWGG	2 cut(s)	290, 356
BstSCI	CCNGG	3 cut(s)	153, 288, 354
BstSFI	CTRYAG	1 cut(s)	381
BstSLI	GKGCMC	2 cut(s)	162, 289
BstV1I	GCAGC	1 cut(s)	673
BstX2I	RGATCY	3 cut(s)	115, 271, 598
BstYI	RGATCY	3 cut(s)	115, 271, 598
Bsu15I	ATCGAT	1 cut(s)	231
BsuRI	GGCC	1 cut(s)	287
BsuTUI	ATCGAT	1 cut(s)	231
BtrI	CACGTC	2 cut(s)	39, 240
BtsIMutI	CAGTG	2 cut(s)	204, 561
Cac8I	GCNNGC	2 cut(s)	593, 684
CaiI	CAGNNNCTG	1 cut(s)	203
CciI	TCATGA	1 cut(s)	631
CfoI	GCGC	1 cut(s)	591
Cfr13I	GGNCC	4 cut(s)	285, 286, 292, 551
ClaI	ATCGAT	1 cut(s)	231
Csp6I	GTAC	2 cut(s)	92, 103
CviAII	CATG	5 cut(s)	32, 185, 337, 349, 632
CviJI	RGCY	8 cut(s)	203, 287, 309, 368, 475, 510, 518, 686
CviKI_1	RGCY	8 cut(s)	203, 287, 309, 368, 475, 510, 518, 686
CviQI	GTAC	2 cut(s)	92, 103
DdeI	CTNAG	1 cut(s)	602
DpnI	GATC	3 cut(s)	117, 273, 600
DpnII	GATC	3 cut(s)	115, 271, 598
DrdI	GACNNNNNNGTC	1 cut(s)	672
DseDI	GACNNNNNNGTC	1 cut(s)	672
Eam1104I	CTCTTC	2 cut(s)	8, 381
EarI	CTCTTC	2 cut(s)	8, 381
Eco24I	GRGCYC	1 cut(s)	289
Eco47I	GGWCC	2 cut(s)	292, 551
Eco57I	CTGAAG	1 cut(s)	104
EcoO109I	RGGNCCY	1 cut(s)	285
EcoRII	CCWGG	2 cut(s)	288, 354
EcoT22I	ATGCAT	1 cut(s)	697
EcoT38I	GRGCYC	1 cut(s)	289
Esp3I	CGTCTC	1 cut(s)	230
FaeI	CATG	5 cut(s)	35, 188, 340, 352, 635
FalI	AAGNNNNNCTT	2 cut(s)	102, 134
FaqI	GGGAC	3 cut(s)	49, 337, 435
FatI	CATG	5 cut(s)	31, 184, 336, 348, 631
FblI	GTMKAC	1 cut(s)	540
Fnu4HI	GCNGC	1 cut(s)	687
FriOI	GRGCYC	1 cut(s)	289
Fsp4HI	GCNGC	1 cut(s)	687
GlaI	GCGC	1 cut(s)	590
GluI	GCNGC	1 cut(s)	687
GsuI	CTGGAG	1 cut(s)	662
HaeII	RGCGCY	1 cut(s)	592
HaeIII	GGCC	1 cut(s)	287
HapII	CCGG	2 cut(s)	155, 295
HhaI	GCGC	1 cut(s)	591
Hin1II	CATG	5 cut(s)	35, 188, 340, 352, 635
Hin6I	GCGC	1 cut(s)	589
HinP1I	GCGC	1 cut(s)	589
HinfI	GANTC	7 cut(s)	134, 142, 169, 206, 217, 402, 423
HpaII	CCGG	2 cut(s)	155, 295
HphI	GGTGA	3 cut(s)	374, 478, 655
Hpy166II	GTNNAC	5 cut(s)	92, 160, 243, 541, 559
Hpy188I	TCNGA	4 cut(s)	123, 455, 506, 567
Hpy188III	TCNNGA	7 cut(s)	221, 413, 427, 439, 524, 632, 655
Hpy8I	GTNNAC	5 cut(s)	92, 160, 243, 541, 559
HpyAV	CCTTC	1 cut(s)	450
HpyCH4IV	ACGT	3 cut(s)	38, 239, 638
HpyCH4V	TGCA	4 cut(s)	160, 595, 689, 695
HpyF10VI	GCNNNNNNNGC	1 cut(s)	692
HpyF3I	CTNAG	1 cut(s)	602
HpySE526I	ACGT	3 cut(s)	38, 239, 638
Hsp92II	CATG	5 cut(s)	35, 188, 340, 352, 635
HspAI	GCGC	1 cut(s)	589
Kzo9I	GATC	3 cut(s)	115, 271, 598
LguI	GCTCTTC	1 cut(s)	8
Lsp1109I	GCAGC	1 cut(s)	673
MaeII	ACGT	3 cut(s)	38, 239, 638
MaeIII	GTNAC	1 cut(s)	643
MalI	GATC	3 cut(s)	117, 273, 600
MboI	GATC	3 cut(s)	115, 271, 598
MboII	GAAGA	8 cut(s)	22, 25, 110, 122, 125, 178, 253, 398
MflI	RGATCY	3 cut(s)	115, 271, 598
MhlI	GDGCHC	2 cut(s)	162, 289
MluCI	AATT	1 cut(s)	546
MlyI	GAGTC	1 cut(s)	417
MmeI	TCCRAC	1 cut(s)	590
Mph1103I	ATGCAT	1 cut(s)	697
MroXI	GAANNNNTTC	2 cut(s)	117, 434
MseI	TTAA	1 cut(s)	78
MspI	CCGG	2 cut(s)	155, 295
MspR9I	CCNGG	3 cut(s)	155, 290, 356
MvaI	CCWGG	2 cut(s)	290, 356
MwoI	GCNNNNNNNGC	1 cut(s)	692
NciI	CCSGG	1 cut(s)	155
NdeII	GATC	3 cut(s)	115, 271, 598
NlaIII	CATG	5 cut(s)	35, 188, 340, 352, 635
NlaIV	GGNNCC	2 cut(s)	273, 287
NmuCI	GTSAC	1 cut(s)	643
NsiI	ATGCAT	1 cut(s)	697
PagI	TCATGA	1 cut(s)	631
PciSI	GCTCTTC	1 cut(s)	8
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PdmI	GAANNNNTTC	2 cut(s)	117, 434
PfeI	GAWTC	6 cut(s)	134, 142, 169, 206, 217, 402
PkrI	GCNGC	1 cut(s)	688
PleI	GAGTC	1 cut(s)	417
PpsI	GAGTC	1 cut(s)	417
Psp6I	CCWGG	2 cut(s)	288, 354
PspGI	CCWGG	2 cut(s)	288, 354
PspN4I	GGNNCC	2 cut(s)	273, 287
PspOMI	GGGCCC	1 cut(s)	285
PspPI	GGNCC	4 cut(s)	285, 286, 292, 551
PstNI	CAGNNNCTG	1 cut(s)	203
PsuI	RGATCY	3 cut(s)	115, 271, 598
RsaI	GTAC	2 cut(s)	93, 104
RsaNI	GTAC	2 cut(s)	92, 103
SapI	GCTCTTC	1 cut(s)	8
SaqAI	TTAA	1 cut(s)	78
SatI	GCNGC	1 cut(s)	687
Sau3AI	GATC	3 cut(s)	115, 271, 598
Sau96I	GGNCC	4 cut(s)	285, 286, 292, 551
SchI	GAGTC	1 cut(s)	417
ScrFI	CCNGG	3 cut(s)	155, 290, 356
SduI	GDGCHC	2 cut(s)	162, 289
SfcI	CTRYAG	1 cut(s)	381
SinI	GGWCC	2 cut(s)	292, 551
SmlI	CTYRAG	3 cut(s)	83, 369, 425
SmoI	CTYRAG	3 cut(s)	83, 369, 425
Sse9I	AATT	1 cut(s)	546
StyD4I	CCNGG	3 cut(s)	153, 288, 354
TaiI	ACGT	3 cut(s)	41, 242, 641
TaqI	TCGA	4 cut(s)	66, 108, 231, 621
TasI	AATT	1 cut(s)	546
TatI	WGTACW	1 cut(s)	91
TfiI	GAWTC	6 cut(s)	134, 142, 169, 206, 217, 402
Tru1I	TTAA	1 cut(s)	78
Tru9I	TTAA	1 cut(s)	78
TscAI	CASTG	2 cut(s)	204, 561
TseFI	GTSAC	1 cut(s)	643
TseI	GCWGC	1 cut(s)	686
Tsp45I	GTSAC	1 cut(s)	643
TspDTI	ATGAA	1 cut(s)	294
TspRI	CASTG	2 cut(s)	204, 561
VneI	GTGCAC	1 cut(s)	158
VpaK11BI	GGWCC	2 cut(s)	292, 551
XmiI	GTMKAC	1 cut(s)	540
XmnI	GAANNNNTTC	2 cut(s)	117, 434
Zsp2I	ATGCAT	1 cut(s)	697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.