FvH4_5g15001

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
8505871 .. 8507124
1254 bp
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UTR
Exon/CDS
Intron
FvH4_5g15001.t1

Sequence Viewer

Length: 480 bp
ATGGAGGGAAAAAACGAAGTAAAACTACATGGAATGTGGGTTAGTACTTACTCCAAGAGAGTGGAACTAGCCCTCAGACTCAAAGGCATACCTTATGAGTACATTGAAGAGGATTTGAGCAACAAGAGCCAGTTGCTCCTCGACTACAATCCAGTTCACAAGAAGGTACCTGTACTCGTCCACAATGGAAAACCCATCTCCGAGTCACACATCATCCTAGAATACATTGACGAAACTTGGAAGACTGCTCCTAAGCTCCTGCCTGAAGATCCTTACCAAAGAGCCAAAGTTCGATTCTGGGCTAGTTTTATCCAGCAACAGTTGTTTGAGAGCGTACTCATAGTAGTGACAAGTTATGGTGAAGCACAAGAAAAGGCGGCCGCAGAAGTGATTGAGAAACAGGGAGTGTTTGAAGAAGGAATGAAGGAGTATTTTGCAGGAGGTGCTTCTTTCACTATGGGGAGAATTGGGGACTACTAG

Protein Analysis

160

Amino Acids

18.23

Weight (kDa)

5.62

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 6 - 78 6.2e-18 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 9 - 79 1.8e-16 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 15 - 79 5.3e-16 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 166
AccB1I GGYRCC 1 cut(s) 166
AciI CCGC 2 cut(s) 377, 381
AclWI GGATC 1 cut(s) 263
AcoI YGGCCR 1 cut(s) 378
AcuI CTGAAG 1 cut(s) 285
AfaI GTAC 5 cut(s) 46, 101, 168, 174, 336
AgsI TTSAA 2 cut(s) 107, 413
AjuI GAANNNNNNNTTGG 2 cut(s) 278, 310
AluBI AGCT 1 cut(s) 256
AluI AGCT 1 cut(s) 256
AlwI GGATC 1 cut(s) 263
AoxI GGCC 1 cut(s) 378
Asp718I GGTACC 1 cut(s) 166
AsuHPI GGTGA 1 cut(s) 371
BanI GGYRCC 1 cut(s) 166
BarI GAAGNNNNNNTAC 2 cut(s) 9, 41
BbsI GAAGAC 1 cut(s) 248
BccI CCATC 1 cut(s) 203
BfaI CTAG 4 cut(s) 68, 218, 303, 478
BisI GCNGC 2 cut(s) 378, 381
BlsI GCNGC 2 cut(s) 379, 382
BmcAI AGTACT 1 cut(s) 46
BmiI GGNNCC 1 cut(s) 168
BpiI GAAGAC 1 cut(s) 248
Bpu10I CCTNAGC 1 cut(s) 252
Bse1I ACTGG 2 cut(s) 130, 152
BseGI GGATG 1 cut(s) 213
BseMII CTCAG 1 cut(s) 88
BseNI ACTGG 2 cut(s) 130, 152
BseRI GAGGAG 1 cut(s) 128
BseX3I CGGCCG 1 cut(s) 378
Bsh1285I CGRYCG 1 cut(s) 381
BshFI GGCC 1 cut(s) 380
BshNI GGYRCC 1 cut(s) 166
BsiEI CGRYCG 1 cut(s) 381
BsnI GGCC 1 cut(s) 380
Bsp143I GATC 1 cut(s) 268
BspACI CCGC 2 cut(s) 377, 381
BspANI GGCC 1 cut(s) 380
BspCNI CTCAG 1 cut(s) 87
BspLI GGNNCC 1 cut(s) 168
BspPI GGATC 1 cut(s) 263
BspT107I GGYRCC 1 cut(s) 166
BsrI ACTGG 2 cut(s) 130, 152
BssMI GATC 1 cut(s) 268
Bst4CI ACNGT 1 cut(s) 321
Bst6I CTCTTC 1 cut(s) 102
BstAPI GCANNNNNTGC 1 cut(s) 443
BstDEI CTNAG 2 cut(s) 74, 252
BstF5I GGATG 1 cut(s) 213
BstKTI GATC 1 cut(s) 271
BstMBI GATC 1 cut(s) 268
BstMCI CGRYCG 1 cut(s) 381
BstMWI GCNNNNNNNGC 2 cut(s) 126, 443
BstV2I GAAGAC 1 cut(s) 248
BstX2I RGATCY 1 cut(s) 268
BstXI CCANNNNNNTGG 1 cut(s) 61
BstYI RGATCY 1 cut(s) 268
BstZI CGGCCG 1 cut(s) 378
BsuRI GGCC 1 cut(s) 380
BtsCI GGATG 1 cut(s) 213
CciNI GCGGCCGC 1 cut(s) 378
Csp6I GTAC 5 cut(s) 45, 100, 167, 173, 335
CviAII CATG 1 cut(s) 29
CviJI RGCY 6 cut(s) 71, 129, 256, 284, 302, 380
CviKI_1 RGCY 6 cut(s) 71, 129, 256, 284, 302, 380
CviQI GTAC 5 cut(s) 45, 100, 167, 173, 335
DdeI CTNAG 2 cut(s) 74, 252
DpnI GATC 1 cut(s) 270
DpnII GATC 1 cut(s) 268
EaeI YGGCCR 1 cut(s) 378
EagI CGGCCG 1 cut(s) 378
Eam1104I CTCTTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 102
EclXI CGGCCG 1 cut(s) 378
Eco52I CGGCCG 1 cut(s) 378
Eco57I CTGAAG 1 cut(s) 285
FaeI CATG 1 cut(s) 32
FaiI YATR 6 cut(s) 30, 89, 96, 341, 357, 458
FatI CATG 1 cut(s) 28
Fnu4HI GCNGC 2 cut(s) 378, 381
FokI GGATG 1 cut(s) 200
Fsp4HI GCNGC 2 cut(s) 378, 381
FspBI CTAG 4 cut(s) 68, 218, 303, 478
GluI GCNGC 2 cut(s) 378, 381
HaeIII GGCC 1 cut(s) 380
Hin1II CATG 1 cut(s) 32
HinfI GANTC 3 cut(s) 78, 203, 294
HphI GGTGA 1 cut(s) 371
Hpy166II GTNNAC 2 cut(s) 157, 181
Hpy188I TCNGA 2 cut(s) 77, 202
Hpy8I GTNNAC 2 cut(s) 157, 181
HpyAV CCTTC 3 cut(s) 157, 410, 418
HpyCH4III ACNGT 1 cut(s) 321
HpyCH4V TGCA 1 cut(s) 437
HpyF10VI GCNNNNNNNGC 2 cut(s) 126, 443
HpyF3I CTNAG 2 cut(s) 74, 252
Hsp92II CATG 1 cut(s) 32
KpnI GGTACC 1 cut(s) 170
Kzo9I GATC 1 cut(s) 268
LmnI GCTCC 3 cut(s) 141, 253, 261
LpnPI CCDG 9 cut(s) 143, 165, 183, 272, 276, 283, 326, 386, 423
MaeI CTAG 4 cut(s) 68, 218, 303, 478
MaeIII GTNAC 2 cut(s) 204, 346
MalI GATC 1 cut(s) 270
MboI GATC 1 cut(s) 268
MboII GAAGA 4 cut(s) 119, 253, 278, 425
MflI RGATCY 1 cut(s) 268
MluCI AATT 1 cut(s) 465
MlyI GAGTC 2 cut(s) 72, 212
MnlI CCTC 4 cut(s) 83, 103, 149, 434
MslI CAYNNNNRTG 1 cut(s) 344
MwoI GCNNNNNNNGC 2 cut(s) 126, 443
NdeII GATC 1 cut(s) 268
NlaIII CATG 1 cut(s) 32
NlaIV GGNNCC 1 cut(s) 168
NmuCI GTSAC 2 cut(s) 204, 346
NotI GCGGCCGC 1 cut(s) 378
PfeI GAWTC 1 cut(s) 294
PkrI GCNGC 2 cut(s) 379, 382
PleI GAGTC 2 cut(s) 72, 211
PpsI GAGTC 2 cut(s) 72, 211
PspN4I GGNNCC 1 cut(s) 168
PsuI RGATCY 1 cut(s) 268
RsaI GTAC 5 cut(s) 46, 101, 168, 174, 336
RsaNI GTAC 5 cut(s) 45, 100, 167, 173, 335
RseI CAYNNNNRTG 1 cut(s) 344
SatI GCNGC 2 cut(s) 378, 381
Sau3AI GATC 1 cut(s) 268
ScaI AGTACT 1 cut(s) 46
SchI GAGTC 2 cut(s) 72, 212
SetI ASST 5 cut(s) 94, 168, 172, 258, 445
SmiMI CAYNNNNRTG 1 cut(s) 344
Sse9I AATT 1 cut(s) 465
SsiI CCGC 2 cut(s) 377, 381
SspMI CTAG 4 cut(s) 68, 218, 303, 478
TaaI ACNGT 1 cut(s) 321
TaqI TCGA 2 cut(s) 141, 292
TasI AATT 1 cut(s) 465
TatI WGTACW 3 cut(s) 44, 99, 172
TauI GCSGC 2 cut(s) 380, 383
TfiI GAWTC 1 cut(s) 294
TseFI GTSAC 2 cut(s) 204, 346
Tsp45I GTSAC 2 cut(s) 204, 346
TspDTI ATGAA 1 cut(s) 437
XspI CTAG 4 cut(s) 68, 218, 303, 478
ZrmI AGTACT 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.