Rw7G003460

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
2793137 .. 2794321
1185 bp
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UTR
Exon/CDS
Intron
Rw7G003460.1

Sequence Viewer

Length: 300 bp
ATGGCCCTCAGACTCAAAGGCATACCTTATGAGTACATGGAAGAGGATTTGAGCAACAAGAGCCATTTTATCCAGCAACAGTTGTTTGAGAGCATACTCAAACTGGTGACAAGTCATGGGGAAGCACAAGAAAAAGCAGCCACGGAAGTGATTGAGAGGCAGGGAGTGTTTGAAGAAGGAATGAAGAAGTATTTTGCAGGAGGTGCTTCTTTCACTAATGAGAAGAATTGGGGGCTACTAGACATATTGATGGGTTCACCATTTGGCGCTTACGAAGTTCATGAAGAAACTTCAAACTGA

Protein Analysis

99

Amino Acids

11.22

Weight (kDa)

4.86

Isoelectric Point (pI)

44.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 35
AgsI TTSAA 2 cut(s) 173, 294
AleI CACNNNNGTG 1 cut(s) 146
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 137
AspLEI GCGC 1 cut(s) 269
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 2 cut(s) 118, 249
BbvI GCAGC 1 cut(s) 149
BccI CCATC 1 cut(s) 244
BfaI CTAG 1 cut(s) 239
BfoI RGCGCY 1 cut(s) 270
BisI GCNGC 1 cut(s) 138
BlsI GCNGC 1 cut(s) 139
BmgT120I GGNCC 1 cut(s) 4
BsaJI CCNNGG 1 cut(s) 141
Bse1I ACTGG 1 cut(s) 108
BseDI CCNNGG 1 cut(s) 141
BseMII CTCAG 1 cut(s) 22
BseNI ACTGG 1 cut(s) 108
BseXI GCAGC 1 cut(s) 149
BshFI GGCC 1 cut(s) 5
BsnI GGCC 1 cut(s) 5
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 21
BspHI TCATGA 1 cut(s) 280
BsrI ACTGG 1 cut(s) 108
BssECI CCNNGG 1 cut(s) 141
Bst4CI ACNGT 1 cut(s) 81
Bst6I CTCTTC 1 cut(s) 36
BstAPI GCANNNNNTGC 1 cut(s) 203
BstDEI CTNAG 1 cut(s) 8
BstDSI CCRYGG 1 cut(s) 141
BstH2I RGCGCY 1 cut(s) 270
BstHHI GCGC 1 cut(s) 269
BstMWI GCNNNNNNNGC 2 cut(s) 60, 203
BstV1I GCAGC 1 cut(s) 149
BsuRI GGCC 1 cut(s) 5
BtgI CCRYGG 1 cut(s) 141
CciI TCATGA 1 cut(s) 280
CfoI GCGC 1 cut(s) 269
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 1 cut(s) 34
CviAII CATG 3 cut(s) 37, 116, 281
CviJI RGCY 4 cut(s) 5, 63, 140, 235
CviKI_1 RGCY 4 cut(s) 5, 63, 140, 235
CviQI GTAC 1 cut(s) 34
DdeI CTNAG 1 cut(s) 8
Eam1104I CTCTTC 1 cut(s) 36
EarI CTCTTC 1 cut(s) 36
FaeI CATG 3 cut(s) 40, 119, 284
FaiI YATR 7 cut(s) 23, 30, 38, 95, 117, 245, 282
FatI CATG 3 cut(s) 36, 115, 280
Fnu4HI GCNGC 1 cut(s) 138
Fsp4HI GCNGC 1 cut(s) 138
FspBI CTAG 1 cut(s) 239
GlaI GCGC 1 cut(s) 268
GluI GCNGC 1 cut(s) 138
HaeII RGCGCY 1 cut(s) 270
HaeIII GGCC 1 cut(s) 5
HhaI GCGC 1 cut(s) 269
Hin1II CATG 3 cut(s) 40, 119, 284
Hin6I GCGC 1 cut(s) 267
HinP1I GCGC 1 cut(s) 267
HinfI GANTC 1 cut(s) 12
HphI GGTGA 2 cut(s) 118, 249
Hpy166II GTNNAC 1 cut(s) 257
Hpy188I TCNGA 1 cut(s) 11
Hpy188III TCNNGA 1 cut(s) 281
Hpy8I GTNNAC 1 cut(s) 257
HpyAV CCTTC 1 cut(s) 170
HpyCH4III ACNGT 1 cut(s) 81
HpyCH4V TGCA 1 cut(s) 197
HpyF10VI GCNNNNNNNGC 2 cut(s) 60, 203
HpyF3I CTNAG 1 cut(s) 8
Hsp92II CATG 3 cut(s) 40, 119, 284
HspAI GCGC 1 cut(s) 267
LpnPI CCDG 4 cut(s) 86, 89, 146, 183
Lsp1109I GCAGC 1 cut(s) 149
MaeI CTAG 1 cut(s) 239
MaeIII GTNAC 1 cut(s) 106
MboII GAAGA 5 cut(s) 53, 185, 196, 235, 296
MluCI AATT 1 cut(s) 226
MlyI GAGTC 1 cut(s) 6
MnlI CCTC 4 cut(s) 17, 37, 150, 194
MslI CAYNNNNRTG 2 cut(s) 146, 248
MwoI GCNNNNNNNGC 2 cut(s) 60, 203
NlaIII CATG 3 cut(s) 40, 119, 284
NmuCI GTSAC 1 cut(s) 106
OliI CACNNNNGTG 1 cut(s) 146
PagI TCATGA 1 cut(s) 280
PkrI GCNGC 1 cut(s) 139
PleI GAGTC 1 cut(s) 6
PpsI GAGTC 1 cut(s) 6
PspPI GGNCC 1 cut(s) 4
RsaI GTAC 1 cut(s) 35
RsaNI GTAC 1 cut(s) 34
RseI CAYNNNNRTG 2 cut(s) 146, 248
SatI GCNGC 1 cut(s) 138
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 1 cut(s) 6
SetI ASST 2 cut(s) 28, 205
SmiMI CAYNNNNRTG 2 cut(s) 146, 248
Sse9I AATT 1 cut(s) 226
SspMI CTAG 1 cut(s) 239
TaaI ACNGT 1 cut(s) 81
TasI AATT 1 cut(s) 226
TatI WGTACW 1 cut(s) 33
TseFI GTSAC 1 cut(s) 106
TseI GCWGC 1 cut(s) 137
Tsp45I GTSAC 1 cut(s) 106
TspDTI ATGAA 3 cut(s) 197, 269, 297
TspGWI ACGGA 1 cut(s) 158
XspI CTAG 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.