Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003983

Physical Location & Seq

Genomic Coordinates Forward (+)

15743335 .. 15744711

Gene Structure 1377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G192700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 693 bp

ATGGAACAGGAGAACAAAGTAAAACTACATGGCATGTGGGCTAGTACTTACTCTCTGAGAGTGGAAATAGCTCTCAGGCTTAAAGGCATACCCTACGAGTACATTGAAGAAGACTTGAGCAACAAGAGCCAGTTGCTCCTCAAGTACAATCCGGTTCACAAGAAGGTCCCGGTGCTGGTCCACAACGGAAAATCCATTGCTGAGTCATACATCATCCTAGAATACATTGATGAAACTTGGAACAGTGATCCTCGGATTCTGCCTGAAGATCCTTATGGAAGAGCTAAAGTTCGATTCTGGGCCTCTTATATCCAGCAACAGTTGTTCGAGGGCCTGAGTCGAGTGGTGACAAGCCGTGGTGAGGCACAAGAGAAAGCGCTCGAGGAAGTGTTTGAGAGACTGAAAGTGTTTGAAGGAGGAATGAAGGAATATCTTCAAGGAGGAGCTTCTTTCACCAATGGAGAGAGTTTGGGACTTCTAGACATATTGATGGTTGTAACATTTGGCCCTTACAAAGCTCATGAAGAAGTCCTTGGTTTCAAAATGTTAGACCCAGAAAGGAATCCATTGTTGTTCTCATGGGTTGCAGCAATGAAGGAGCATCCGGTGGTAAAAGAAGTTGACCCTCCTCATGGCAAGCTTGTTGAACTGCTTCAGTTTATTAGAAGTACCAGTCATGCTAGATCACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_N GST_N_3

Protein Analysis

231

Amino Acids

26.42

Weight (kDa)

6.09

Isoelectric Point (pI)

36.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003983)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74590
fragaria_vesca	FvH4_5g15000 FvH4_5g15001
prunus_persica	Prupe.1G274400_v2.0.a1 Prupe.5G192700_v2.0.a1
pyrus_communis	pycom06g17080
rosa_chinensis	RchiOBHm_Chr4g0439891 RchiOBHm_Chr7g0181301 RchiOBHm_Chr7g0181321
rosa_laevigata	RLG00000005199 RLG00000005200 RLG00000006229
rosa_multiflora	Rmu_sc0001147.1_g000005 Rmu_sc0009047.1_g000005 Rmu_sc0016669.1_g000002 Rmu_sc0016669.1_g000003
rosa_roxburghii	Rroxscaffold_3G00272140 Rroxscaffold_3G00272150 Rroxscaffold_5G00380820
rosa_rugosa	Rorug04G0322100 Rorug05G0264100.1 Rorug06G0440100 Rorug06G0440200
rosa_samantha	Rh4AG373100 Rh7AG042100 Rh7BG040900 Rh7BG041100 Rh7CG043300 Rh7CG043400 Rh7DG042000
rosa_wichuraiana	Rw4G031900 Rw7G003460 Rw7G003470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	2 cut(s)	242, 263
AcuI	CTGAAG	2 cut(s)	285, 638
AfaI	GTAC	4 cut(s)	46, 101, 146, 670
AfeI	AGCGCT	1 cut(s)	378
AfiI	CCNNNNNNNGG	3 cut(s)	175, 361, 632
AgsI	TTSAA	5 cut(s)	107, 413, 437, 541, 647
AjuI	GAANNNNNNNTTGG	2 cut(s)	516, 548
AluBI	AGCT	5 cut(s)	71, 284, 446, 518, 640
AluI	AGCT	5 cut(s)	71, 284, 446, 518, 640
Alw26I	GTCTC	1 cut(s)	391
AlwI	GGATC	2 cut(s)	242, 263
Ama87I	CYCGRG	1 cut(s)	380
Aor51HI	AGCGCT	1 cut(s)	378
AoxI	GGCC	3 cut(s)	300, 331, 505
ApeKI	GCWGC	1 cut(s)	587
Asp700I	GAANNNNTTC	2 cut(s)	432, 651
AspLEI	GCGC	1 cut(s)	379
AspS9I	GGNCC	5 cut(s)	166, 178, 300, 331, 506
AsuC2I	CCSGG	1 cut(s)	170
AsuHPI	GGTGA	3 cut(s)	358, 371, 445
AvaI	CYCGRG	1 cut(s)	380
AvaII	GGWCC	2 cut(s)	166, 178
BbsI	GAAGAC	1 cut(s)	117
BbvI	GCAGC	1 cut(s)	599
BccI	CCATC	1 cut(s)	484
BceAI	ACGGC	1 cut(s)	339
BcnI	CCSGG	1 cut(s)	170
BcoDI	GTCTC	1 cut(s)	391
BfaI	CTAG	4 cut(s)	42, 218, 479, 681
BfoI	RGCGCY	1 cut(s)	380
BisI	GCNGC	1 cut(s)	588
BlsI	GCNGC	1 cut(s)	589
BmcAI	AGTACT	1 cut(s)	46
Bme1390I	CCNGG	1 cut(s)	170
Bme18I	GGWCC	2 cut(s)	166, 178
BmeT110I	CYCGRG	1 cut(s)	380
BmgT120I	GGNCC	5 cut(s)	166, 178, 300, 331, 506
BmiI	GGNNCC	1 cut(s)	168
BmrFI	CCNGG	1 cut(s)	170
BmsI	GCATC	1 cut(s)	610
BpiI	GAAGAC	1 cut(s)	117
BpuEI	CTTGAG	2 cut(s)	125, 136
BpuMI	CCSGG	1 cut(s)	170
BsaJI	CCNNGG	3 cut(s)	251, 355, 532
BsaWI	WCCGGW	2 cut(s)	151, 604
Bsc4I	CCNNNNNNNGG	3 cut(s)	175, 361, 632
Bse1I	ACTGG	2 cut(s)	130, 672
Bse3DI	GCAATG	2 cut(s)	195, 597
BseDI	CCNNGG	3 cut(s)	251, 355, 532
BseGI	GGATG	2 cut(s)	213, 601
BseLI	CCNNNNNNNGG	3 cut(s)	175, 361, 632
BseMI	GCAATG	2 cut(s)	195, 597
BseMII	CTCAG	4 cut(s)	47, 88, 192, 326
BseNI	ACTGG	2 cut(s)	130, 672
BseRI	GAGGAG	3 cut(s)	128, 456, 618
BseXI	GCAGC	1 cut(s)	599
BshFI	GGCC	3 cut(s)	302, 333, 507
BsiHKCI	CYCGRG	1 cut(s)	380
BsiSI	CCGG	3 cut(s)	152, 170, 605
BslFI	GGGAC	2 cut(s)	152, 486
BslI	CCNNNNNNNGG	3 cut(s)	175, 361, 632
BsmAI	GTCTC	1 cut(s)	391
BsmFI	GGGAC	2 cut(s)	152, 486
BsnI	GGCC	3 cut(s)	302, 333, 507
BsoBI	CYCGRG	1 cut(s)	380
Bsp143I	GATC	3 cut(s)	247, 268, 683
BspANI	GGCC	3 cut(s)	302, 333, 507
BspCNI	CTCAG	4 cut(s)	48, 87, 193, 327
BspHI	TCATGA	1 cut(s)	520
BspLI	GGNNCC	1 cut(s)	168
BspPI	GGATC	2 cut(s)	242, 263
BspQI	GCTCTTC	1 cut(s)	274
BsrDI	GCAATG	2 cut(s)	195, 597
BsrI	ACTGG	2 cut(s)	130, 672
BssECI	CCNNGG	3 cut(s)	251, 355, 532
BssMI	GATC	3 cut(s)	247, 268, 683
BssT1I	CCWWGG	1 cut(s)	532
Bst4CI	ACNGT	2 cut(s)	245, 321
Bst6I	CTCTTC	1 cut(s)	274
BstC8I	GCNNGC	1 cut(s)	638
BstDEI	CTNAG	4 cut(s)	56, 74, 201, 335
BstDSI	CCRYGG	1 cut(s)	355
BstF5I	GGATG	2 cut(s)	213, 601
BstH2I	RGCGCY	1 cut(s)	380
BstHHI	GCGC	1 cut(s)	379
BstKTI	GATC	3 cut(s)	250, 271, 686
BstMAI	GTCTC	1 cut(s)	391
BstMBI	GATC	3 cut(s)	247, 268, 683
BstMWI	GCNNNNNNNGC	1 cut(s)	126
BstNSI	RCATGY	1 cut(s)	37
BstSCI	CCNGG	1 cut(s)	168
BstV1I	GCAGC	1 cut(s)	599
BstV2I	GAAGAC	1 cut(s)	117
BstX2I	RGATCY	1 cut(s)	268
BstYI	RGATCY	1 cut(s)	268
BsuRI	GGCC	3 cut(s)	302, 333, 507
BtgI	CCRYGG	1 cut(s)	355
BtsCI	GGATG	2 cut(s)	213, 601
BtsIMutI	CAGTG	1 cut(s)	250
Cac8I	GCNNGC	1 cut(s)	638
CciI	TCATGA	1 cut(s)	520
CfoI	GCGC	1 cut(s)	379
Cfr13I	GGNCC	5 cut(s)	166, 178, 300, 331, 506
Csp6I	GTAC	4 cut(s)	45, 100, 145, 669
CviAII	CATG	6 cut(s)	29, 34, 521, 579, 632, 677
CviQI	GTAC	4 cut(s)	45, 100, 145, 669
DdeI	CTNAG	4 cut(s)	56, 74, 201, 335
DpnI	GATC	3 cut(s)	249, 270, 685
DpnII	GATC	3 cut(s)	247, 268, 683
Eam1104I	CTCTTC	1 cut(s)	274
EarI	CTCTTC	1 cut(s)	274
Eco130I	CCWWGG	1 cut(s)	532
Eco47I	GGWCC	2 cut(s)	166, 178
Eco47III	AGCGCT	1 cut(s)	378
Eco57I	CTGAAG	2 cut(s)	285, 638
Eco88I	CYCGRG	1 cut(s)	380
EcoO109I	RGGNCCY	2 cut(s)	166, 331
EcoT14I	CCWWGG	1 cut(s)	532
ErhI	CCWWGG	1 cut(s)	532
FaeI	CATG	6 cut(s)	32, 37, 524, 582, 635, 680
FalI	AAGNNNNNCTT	2 cut(s)	516, 548
FaqI	GGGAC	2 cut(s)	152, 486
FatI	CATG	6 cut(s)	28, 33, 520, 578, 631, 676
Fnu4HI	GCNGC	1 cut(s)	588
FokI	GGATG	2 cut(s)	200, 588
Fsp4HI	GCNGC	1 cut(s)	588
FspBI	CTAG	4 cut(s)	42, 218, 479, 681
GlaI	GCGC	1 cut(s)	378
GluI	GCNGC	1 cut(s)	588
HaeII	RGCGCY	1 cut(s)	380
HaeIII	GGCC	3 cut(s)	302, 333, 507
HapII	CCGG	3 cut(s)	152, 170, 605
HhaI	GCGC	1 cut(s)	379
Hin1II	CATG	6 cut(s)	32, 37, 524, 582, 635, 680
Hin6I	GCGC	1 cut(s)	377
HinP1I	GCGC	1 cut(s)	377
HincII	GTYRAC	1 cut(s)	622
HindII	GTYRAC	1 cut(s)	622
HindIII	AAGCTT	1 cut(s)	638
HinfI	GANTC	5 cut(s)	203, 256, 294, 337, 562
HpaII	CCGG	3 cut(s)	152, 170, 605
HphI	GGTGA	3 cut(s)	358, 371, 445
Hpy166II	GTNNAC	3 cut(s)	157, 181, 622
Hpy188I	TCNGA	2 cut(s)	57, 255
Hpy188III	TCNNGA	2 cut(s)	479, 521
Hpy8I	GTNNAC	3 cut(s)	157, 181, 622
HpyAV	CCTTC	4 cut(s)	157, 407, 418, 589
HpyCH4III	ACNGT	2 cut(s)	245, 321
HpyCH4V	TGCA	1 cut(s)	587
HpyF10VI	GCNNNNNNNGC	1 cut(s)	126
HpyF3I	CTNAG	4 cut(s)	56, 74, 201, 335
Hsp92II	CATG	6 cut(s)	32, 37, 524, 582, 635, 680
HspAI	GCGC	1 cut(s)	377
Kzo9I	GATC	3 cut(s)	247, 268, 683
LguI	GCTCTTC	1 cut(s)	274
LmnI	GCTCC	3 cut(s)	141, 443, 598
Lsp1109I	GCAGC	1 cut(s)	599
LweI	GCATC	1 cut(s)	610
MaeI	CTAG	4 cut(s)	42, 218, 479, 681
MaeIII	GTNAC	2 cut(s)	346, 496
MalI	GATC	3 cut(s)	249, 270, 685
MboI	GATC	3 cut(s)	247, 268, 683
MboII	GAAGA	6 cut(s)	119, 122, 278, 291, 425, 536
MflI	RGATCY	1 cut(s)	268
MlyI	GAGTC	2 cut(s)	212, 346
MroXI	GAANNNNTTC	2 cut(s)	432, 651
MseI	TTAA	1 cut(s)	81
MslI	CAYNNNNRTG	1 cut(s)	488
MspI	CCGG	3 cut(s)	152, 170, 605
MspR9I	CCNGG	1 cut(s)	170
MwoI	GCNNNNNNNGC	1 cut(s)	126
NciI	CCSGG	1 cut(s)	170
NdeII	GATC	3 cut(s)	247, 268, 683
NlaIII	CATG	6 cut(s)	32, 37, 524, 582, 635, 680
NlaIV	GGNNCC	1 cut(s)	168
NmuCI	GTSAC	1 cut(s)	346
NspI	RCATGY	1 cut(s)	37
PaeR7I	CTCGAG	1 cut(s)	380
PagI	TCATGA	1 cut(s)	520
PciSI	GCTCTTC	1 cut(s)	274
PdmI	GAANNNNTTC	2 cut(s)	432, 651
PfeI	GAWTC	3 cut(s)	256, 294, 562
PkrI	GCNGC	1 cut(s)	589
PleI	GAGTC	2 cut(s)	211, 345
PpsI	GAGTC	2 cut(s)	211, 345
PpuMI	RGGWCCY	1 cut(s)	166
Psp5II	RGGWCCY	1 cut(s)	166
PspN4I	GGNNCC	1 cut(s)	168
PspPI	GGNCC	5 cut(s)	166, 178, 300, 331, 506
PspPPI	RGGWCCY	1 cut(s)	166
PspXI	VCTCGAGB	1 cut(s)	380
PsuI	RGATCY	1 cut(s)	268
RsaI	GTAC	4 cut(s)	46, 101, 146, 670
RsaNI	GTAC	4 cut(s)	45, 100, 145, 669
RseI	CAYNNNNRTG	1 cut(s)	488
SapI	GCTCTTC	1 cut(s)	274
SaqAI	TTAA	1 cut(s)	81
SatI	GCNGC	1 cut(s)	588
Sau3AI	GATC	3 cut(s)	247, 268, 683
Sau96I	GGNCC	5 cut(s)	166, 178, 300, 331, 506
ScaI	AGTACT	1 cut(s)	46
SchI	GAGTC	2 cut(s)	212, 346
ScrFI	CCNGG	1 cut(s)	170
SetI	ASST	6 cut(s)	73, 168, 286, 448, 520, 642
SfaNI	GCATC	1 cut(s)	610
Sfr274I	CTCGAG	1 cut(s)	380
SinI	GGWCC	2 cut(s)	166, 178
SlaI	CTCGAG	1 cut(s)	380
SmiMI	CAYNNNNRTG	1 cut(s)	488
SmlI	CTYRAG	3 cut(s)	115, 140, 380
SmoI	CTYRAG	3 cut(s)	115, 140, 380
SspMI	CTAG	4 cut(s)	42, 218, 479, 681
StyD4I	CCNGG	1 cut(s)	168
StyI	CCWWGG	1 cut(s)	532
TaaI	ACNGT	2 cut(s)	245, 321
TaqI	TCGA	4 cut(s)	292, 327, 340, 381
TatI	WGTACW	3 cut(s)	44, 99, 144
TfiI	GAWTC	3 cut(s)	256, 294, 562
Tru1I	TTAA	1 cut(s)	81
Tru9I	TTAA	1 cut(s)	81
TscAI	CASTG	1 cut(s)	250
TseFI	GTSAC	1 cut(s)	346
TseI	GCWGC	1 cut(s)	587
Tsp45I	GTSAC	1 cut(s)	346
TspDTI	ATGAA	4 cut(s)	246, 437, 537, 608
TspGWI	ACGGA	1 cut(s)	201
TspRI	CASTG	1 cut(s)	250
VpaK11BI	GGWCC	2 cut(s)	166, 178
XbaI	TCTAGA	1 cut(s)	478
XceI	RCATGY	1 cut(s)	37
XhoI	CTCGAG	1 cut(s)	380
XmnI	GAANNNNTTC	2 cut(s)	432, 651
XspI	CTAG	4 cut(s)	42, 218, 479, 681
ZrmI	AGTACT	1 cut(s)	46

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.