Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001419

Physical Location & Seq

Genomic Coordinates Forward (+)

7382805 .. 7387976

Gene Structure 5172 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G16990.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGGAGGATGGAATTGGAGGGCTGAGACACATGTTGGCGACGGTTTTTCTTTCTGCCTTCGCCGGATTCATGGTAGTACCAGTGATTACTGATGTCACCGTCGCTGCTGTATGCTCTGGCCCTGACGACTCATGTTCTCTTGCCGTTTACCTCACTGGTTTTCAACAAGTGGCAATAGGGATGGGGACTATGATAATGATGCCAGTAATTGGGAATCTATCAGACAGATATGGGATTAAAACAATCCTCACCCTTCCCATGTGTCTCTCCATTGTTCCTCCTGTAATTTTAGGATACAGAAGGGATATAAAATTCTTTTATGTGTTTTATATAAGCAAGATTCTGACCTCTATGGTATGTGAAGGCACCGTTGACTGCCTAGCTTATGCATATGTGGCAGTAAATATTCATGGCAGTACAAGAATTTCAGCTTTTGGTATTTTAGCTGGTATCAAAACAATTGCTGGACTTTTTGGAACATTAGTTGCTCGTTTTCTTCCCATAGCTTTGACTTTTCAGGTTTCTGCTATATCATTTTTCGTTGGCCTAGTGTACATGAGAGTTTTCCTAAAAGAAAAGCTAAACGATGATGAAGATGATGATCTTCATCATGGTACGTATCATCAAGAGGATCATGATAGTATTAATACCACAATGTTAGCAGAGCCGATTCTGAACGATAGACCCATCAAAACACAAGTCTTTCACAAGAAGTATTCTTCATTGAAAGATATGATCAGCTTGATGAAGACTAGCACCATATTCTTTCAAGCATTGGTTGTTACATTCTTCAGCAGTTTTTCAGATAGTGGAATGGAGTCTGCTTTCTTGTACTTTTTGAAAGCACGTTTTGGATTTGACAAGAAGCAGTTTGCTGATCTCTTGCTGTTGATTACCATCGTTGGGTCTATCTCTCAATTGTTTGTACTGCCAAGATTTGCATCGGCCATTGGAGAATGCAAGCTTTTATCAACAGGGCTTTTTATGGAATTCATAAACATGGCCATTGTCAGCATTTCTTGGGCACCATGGGTTCCTTATCTCACCACTGTGTTTGTACCTGGAGCCTTATTTGTGATGCCATCGGTTTGTGGTATTGCCTCGAGACAAGTTGGACCTGGTGAACAGGGAAAAGTTCAAGGATGCATATCTGGAGTGAGGTCCTTTGGCAAAGTGGTGGCACCATTTGTGTTCAGTCCATTGACAGCGTTGTTTCTTTCAAAAAATGCACCGTTCTATTTCCCTGGATTCAGCCTCCTTTGCATCTCCTTGTCCTCGTTGATCGGTTTCTTTCAGAGTCTACTGATTAAAGATGTCCCTACTCCACCATTGAACAAAGCAATCAACAAAACCTCAGGCGAGGAAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1

Protein Analysis

456

Amino Acids

49.84

Weight (kDa)

7.54

Isoelectric Point (pI)

34.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	12 - 395	1.7e-18	Major Facilitator Superfamily
MFS_1	PF07690	259 - 424	2.3e-06	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16980 AT2G16980 AT2G16980 AT2G16980 AT2G16980 AT2G16980 AT2G16990 AT2G16990 AT2G16990 AT2G16990 AT2G16990 AT2G16990 AT2G16990 AT2G16990
fragaria_vesca	FvH4_2g15722 FvH4_2g15730 FvH4_2g15730 FvH4_2g15730 FvH4_2g15730 FvH4_2g15730
malus_domestica	MD05G1126300.v1.1 MD10G1129100.v1.1
prunus_persica	Prupe.8G169700_v2.0.a1 Prupe.8G169700_v2.0.a1 Prupe.8G169700_v2.0.a1
pyrus_communis	pycom05g12210 pycom10g11070
rosa_chinensis	RchiOBHm_Chr6g0279031 RchiOBHm_Chr6g0279041
rosa_laevigata	RLG00000013171
rosa_multiflora	Rmu_sc0002080.1_g000008 Rmu_sc0002080.1_g000013
rosa_roxburghii	Rroxscaffold_7G00189190
rosa_rugosa	Rorug06G0121300 Rorug06G0121400.1 Rorug06G0121500 Rorug06G0121600
rosa_samantha	Rh6AG230600 Rh6BG235400 Rh6CG237400 Rh6DG229200
rosa_wichuraiana	Rw0G017030 Rw0G021110 Rw6G020180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	365, 1024, 1180
AccB7I	CCANNNNNTGG	1 cut(s)	209
AccI	GTMKAC	1 cut(s)	1300
AclWI	GGATC	1 cut(s)	639
AcoI	YGGCCR	2 cut(s)	945, 1002
AcsI	RAATTY	3 cut(s)	311, 423, 989
AcuI	CTGAAG	1 cut(s)	775
AfaI	GTAC	7 cut(s)	78, 418, 554, 616, 833, 927, 1059
AfiI	CCNNNNNNNGG	2 cut(s)	209, 903
AflIII	ACRYGT	1 cut(s)	30
AgsI	TTSAA	7 cut(s)	164, 727, 770, 841, 1139, 1221, 1333
AjnI	CCWGG	3 cut(s)	1060, 1117, 1243
AleI	CACNNNNGTG	1 cut(s)	1049
AluBI	AGCT	7 cut(s)	383, 431, 446, 506, 580, 741, 964
AluI	AGCT	7 cut(s)	383, 431, 446, 506, 580, 741, 964
Alw26I	GTCTC	3 cut(s)	19, 269, 1099
AlwI	GGATC	1 cut(s)	639
Ama87I	CYCGRG	1 cut(s)	1102
AoxI	GGCC	4 cut(s)	118, 544, 945, 1002
ApeKI	GCWGC	1 cut(s)	104
ApoI	RAATTY	3 cut(s)	311, 423, 989
ArsI	GACNNNNNNTTYG	2 cut(s)	684, 716
AseI	ATTAAT	1 cut(s)	645
AspS9I	GGNCC	3 cut(s)	119, 1115, 1161
AsuHPI	GGTGA	4 cut(s)	88, 241, 1036, 1133
AvaI	CYCGRG	1 cut(s)	1102
AvaII	GGWCC	2 cut(s)	1115, 1161
AxyI	CCTNAGG	1 cut(s)	1354
BaeGI	GKGCMC	1 cut(s)	1027
BalI	TGGCCA	1 cut(s)	1004
BanI	GGYRCC	3 cut(s)	365, 1024, 1180
BbsI	GAAGAC	1 cut(s)	755
BbvI	GCAGC	1 cut(s)	91
BccI	CCATC	5 cut(s)	2, 175, 695, 905, 1090
BceAI	ACGGC	1 cut(s)	128
BciT130I	CCWGG	3 cut(s)	1062, 1119, 1245
BciVI	GTATCC	1 cut(s)	287
BclI	TGATCA	1 cut(s)	735
BcoDI	GTCTC	3 cut(s)	19, 269, 1099
BfaI	CTAG	3 cut(s)	380, 548, 753
BfuI	GTATCC	1 cut(s)	287
BisI	GCNGC	1 cut(s)	105
BlsI	GCNGC	1 cut(s)	106
Bme1390I	CCNGG	3 cut(s)	1062, 1119, 1245
Bme18I	GGWCC	2 cut(s)	1115, 1161
BmeT110I	CYCGRG	1 cut(s)	1102
BmgT120I	GGNCC	3 cut(s)	119, 1115, 1161
BmiI	GGNNCC	5 cut(s)	367, 1026, 1035, 1066, 1182
BmrFI	CCNGG	3 cut(s)	1062, 1119, 1245
BmsI	GCATC	5 cut(s)	189, 950, 1068, 1133, 1272
BpiI	GAAGAC	1 cut(s)	755
BpmI	CTGGAG	2 cut(s)	1083, 1173
BsaAI	YACGTR	1 cut(s)	618
BsaBI	GATNNNNATC	5 cut(s)	600, 606, 896, 940, 1147
BsaJI	CCNNGG	2 cut(s)	1028, 1243
Bsc4I	CCNNNNNNNGG	2 cut(s)	209, 903
Bse1I	ACTGG	3 cut(s)	80, 160, 203
Bse21I	CCTNAGG	1 cut(s)	1354
Bse8I	GATNNNNATC	5 cut(s)	600, 606, 896, 940, 1147
BseBI	CCWGG	3 cut(s)	1062, 1119, 1245
BseDI	CCNNGG	2 cut(s)	1028, 1243
BseGI	GGATG	3 cut(s)	13, 186, 1148
BseJI	GATNNNNATC	5 cut(s)	600, 606, 896, 940, 1147
BseLI	CCNNNNNNNGG	2 cut(s)	209, 903
BseMII	CTCAG	2 cut(s)	14, 1368
BseNI	ACTGG	3 cut(s)	80, 160, 203
BseSI	GKGCMC	1 cut(s)	1027
BseXI	GCAGC	1 cut(s)	91
BshFI	GGCC	4 cut(s)	120, 546, 947, 1004
BshNI	GGYRCC	3 cut(s)	365, 1024, 1180
BsiHKCI	CYCGRG	1 cut(s)	1102
BsiSI	CCGG	1 cut(s)	63
BslFI	GGGAC	2 cut(s)	199, 1301
BslI	CCNNNNNNNGG	2 cut(s)	209, 903
BsmAI	GTCTC	3 cut(s)	19, 269, 1099
BsmFI	GGGAC	2 cut(s)	199, 1301
BsmI	GAATGC	1 cut(s)	962
BsnI	GGCC	4 cut(s)	120, 546, 947, 1004
BsoBI	CYCGRG	1 cut(s)	1102
Bsp1286I	GDGCHC	1 cut(s)	1027
Bsp1407I	TGTACA	1 cut(s)	552
Bsp143I	GATC	5 cut(s)	601, 631, 735, 877, 1281
Bsp19I	CCATGG	1 cut(s)	1028
BspANI	GGCC	4 cut(s)	120, 546, 947, 1004
BspCNI	CTCAG	2 cut(s)	15, 1367
BspHI	TCATGA	1 cut(s)	634
BspLI	GGNNCC	5 cut(s)	367, 1026, 1035, 1066, 1182
BspPI	GGATC	1 cut(s)	639
BspT107I	GGYRCC	3 cut(s)	365, 1024, 1180
BsrGI	TGTACA	1 cut(s)	552
BsrI	ACTGG	3 cut(s)	80, 160, 203
BssECI	CCNNGG	2 cut(s)	1028, 1243
BssMI	GATC	5 cut(s)	601, 631, 735, 877, 1281
BssT1I	CCWWGG	1 cut(s)	1028
Bst2UI	CCWGG	3 cut(s)	1062, 1119, 1245
Bst4CI	ACNGT	5 cut(s)	43, 100, 370, 1051, 1233
BstAUI	TGTACA	1 cut(s)	552
BstBAI	YACGTR	1 cut(s)	618
BstC8I	GCNNGC	1 cut(s)	962
BstDEI	CTNAG	2 cut(s)	23, 1354
BstDSI	CCRYGG	1 cut(s)	1028
BstF5I	GGATG	3 cut(s)	13, 186, 1148
BstKTI	GATC	5 cut(s)	604, 634, 738, 880, 1284
BstMAI	GTCTC	3 cut(s)	19, 269, 1099
BstMBI	GATC	5 cut(s)	601, 631, 735, 877, 1281
BstMWI	GCNNNNNNNGC	2 cut(s)	395, 1260
BstNI	CCWGG	3 cut(s)	1062, 1119, 1245
BstNSI	RCATGY	1 cut(s)	34
BstSCI	CCNGG	3 cut(s)	1060, 1117, 1243
BstSLI	GKGCMC	1 cut(s)	1027
BstSNI	TACGTA	1 cut(s)	618
BstV1I	GCAGC	1 cut(s)	91
BstV2I	GAAGAC	1 cut(s)	755
Bsu36I	CCTNAGG	1 cut(s)	1354
BsuI	GTATCC	1 cut(s)	287
BsuRI	GGCC	4 cut(s)	120, 546, 947, 1004
BtgI	CCRYGG	1 cut(s)	1028
BtsCI	GGATG	3 cut(s)	13, 186, 1148
BtsIMutI	CAGTG	3 cut(s)	87, 153, 1047
Cac8I	GCNNGC	1 cut(s)	962
CciI	TCATGA	1 cut(s)	634
Cfr13I	GGNCC	3 cut(s)	119, 1115, 1161
CsiI	ACCWGGT	1 cut(s)	1117
Csp6I	GTAC	7 cut(s)	77, 417, 553, 615, 832, 926, 1058
CspCI	CAANNNNNGTGG	2 cut(s)	1036, 1071
CviQI	GTAC	7 cut(s)	77, 417, 553, 615, 832, 926, 1058
DdeI	CTNAG	2 cut(s)	23, 1354
DpnI	GATC	5 cut(s)	603, 633, 737, 879, 1283
DpnII	GATC	5 cut(s)	601, 631, 735, 877, 1281
EaeI	YGGCCR	2 cut(s)	945, 1002
Eco105I	TACGTA	1 cut(s)	618
Eco130I	CCWWGG	1 cut(s)	1028
Eco47I	GGWCC	2 cut(s)	1115, 1161
Eco57I	CTGAAG	1 cut(s)	775
Eco81I	CCTNAGG	1 cut(s)	1354
Eco88I	CYCGRG	1 cut(s)	1102
EcoO109I	RGGNCCY	1 cut(s)	1161
EcoRI	GAATTC	1 cut(s)	989
EcoRII	CCWGG	3 cut(s)	1060, 1117, 1243
EcoT14I	CCWWGG	1 cut(s)	1028
EcoT22I	ATGCAT	2 cut(s)	391, 1148
ErhI	CCWWGG	1 cut(s)	1028
FaqI	GGGAC	2 cut(s)	199, 1301
FauNDI	CATATG	1 cut(s)	391
FbaI	TGATCA	1 cut(s)	735
FblI	GTMKAC	1 cut(s)	1300
Fnu4HI	GCNGC	1 cut(s)	105
FokI	GGATG	3 cut(s)	20, 193, 1155
Fsp4HI	GCNGC	1 cut(s)	105
FspBI	CTAG	3 cut(s)	380, 548, 753
GluI	GCNGC	1 cut(s)	105
GsuI	CTGGAG	2 cut(s)	1083, 1173
HaeIII	GGCC	4 cut(s)	120, 546, 947, 1004
HapII	CCGG	1 cut(s)	63
HincII	GTYRAC	1 cut(s)	373
HindII	GTYRAC	1 cut(s)	373
HindIII	AAGCTT	1 cut(s)	962
HinfI	GANTC	8 cut(s)	66, 128, 214, 340, 670, 818, 1248, 1297
HpaII	CCGG	1 cut(s)	63
HphI	GGTGA	4 cut(s)	88, 241, 1036, 1133
Hpy166II	GTNNAC	5 cut(s)	148, 373, 553, 1124, 1301
Hpy188I	TCNGA	5 cut(s)	223, 345, 675, 805, 1296
Hpy188III	TCNNGA	4 cut(s)	626, 635, 1104, 1152
Hpy8I	GTNNAC	5 cut(s)	148, 373, 553, 1124, 1301
Hpy99I	CGWCG	2 cut(s)	43, 104
HpyAV	CCTTC	4 cut(s)	67, 263, 294, 356
HpyCH4III	ACNGT	5 cut(s)	43, 100, 370, 1051, 1233
HpyCH4IV	ACGT	2 cut(s)	617, 847
HpyCH4V	TGCA	6 cut(s)	389, 941, 960, 1146, 1229, 1263
HpyF10VI	GCNNNNNNNGC	2 cut(s)	395, 1260
HpyF3I	CTNAG	2 cut(s)	23, 1354
HpySE526I	ACGT	2 cut(s)	617, 847
Ksp22I	TGATCA	1 cut(s)	735
Kzo9I	GATC	5 cut(s)	601, 631, 735, 877, 1281
LmnI	GCTCC	1 cut(s)	1064
Lsp1109I	GCAGC	1 cut(s)	91
LweI	GCATC	5 cut(s)	189, 950, 1068, 1133, 1272
MabI	ACCWGGT	1 cut(s)	1117
MaeI	CTAG	3 cut(s)	380, 548, 753
MaeII	ACGT	2 cut(s)	617, 847
MaeIII	GTNAC	2 cut(s)	94, 781
MalI	GATC	5 cut(s)	603, 633, 737, 879, 1283
MboI	GATC	5 cut(s)	601, 631, 735, 877, 1281
MboII	GAAGA	6 cut(s)	488, 596, 605, 711, 760, 781
MfeI	CAATTG	2 cut(s)	459, 917
MhlI	GDGCHC	1 cut(s)	1027
MlsI	TGGCCA	1 cut(s)	1004
MluCI	AATT	8 cut(s)	12, 207, 285, 311, 423, 459, 917, 989
MluNI	TGGCCA	1 cut(s)	1004
MlyI	GAGTC	3 cut(s)	122, 827, 1306
MmeI	TCCRAC	1 cut(s)	1093
Mox20I	TGGCCA	1 cut(s)	1004
Mph1103I	ATGCAT	2 cut(s)	391, 1148
MscI	TGGCCA	1 cut(s)	1004
MseI	TTAA	3 cut(s)	237, 645, 1308
MslI	CAYNNNNRTG	2 cut(s)	998, 1049
Msp20I	TGGCCA	1 cut(s)	1004
MspI	CCGG	1 cut(s)	63
MspR9I	CCNGG	3 cut(s)	1062, 1119, 1245
MunI	CAATTG	2 cut(s)	459, 917
Mva1269I	GAATGC	1 cut(s)	962
MvaI	CCWGG	3 cut(s)	1062, 1119, 1245
MwoI	GCNNNNNNNGC	2 cut(s)	395, 1260
NcoI	CCATGG	1 cut(s)	1028
NdeI	CATATG	1 cut(s)	391
NdeII	GATC	5 cut(s)	601, 631, 735, 877, 1281
NlaIV	GGNNCC	5 cut(s)	367, 1026, 1035, 1066, 1182
NmuCI	GTSAC	1 cut(s)	94
NsiI	ATGCAT	2 cut(s)	391, 1148
NspI	RCATGY	1 cut(s)	34
OliI	CACNNNNGTG	1 cut(s)	1049
PaeR7I	CTCGAG	1 cut(s)	1102
PagI	TCATGA	1 cut(s)	634
PciI	ACATGT	1 cut(s)	30
PctI	GAATGC	1 cut(s)	962
PfeI	GAWTC	5 cut(s)	66, 214, 340, 670, 1248
PflMI	CCANNNNNTGG	1 cut(s)	209
PkrI	GCNGC	1 cut(s)	106
PleI	GAGTC	3 cut(s)	122, 826, 1305
PpsI	GAGTC	3 cut(s)	122, 826, 1305
Ppu21I	YACGTR	1 cut(s)	618
PpuMI	RGGWCCY	1 cut(s)	1161
PscI	ACATGT	1 cut(s)	30
PshBI	ATTAAT	1 cut(s)	645
Psp5II	RGGWCCY	1 cut(s)	1161
Psp6I	CCWGG	3 cut(s)	1060, 1117, 1243
PspGI	CCWGG	3 cut(s)	1060, 1117, 1243
PspN4I	GGNNCC	5 cut(s)	367, 1026, 1035, 1066, 1182
PspPI	GGNCC	3 cut(s)	119, 1115, 1161
PspPPI	RGGWCCY	1 cut(s)	1161
RsaI	GTAC	7 cut(s)	78, 418, 554, 616, 833, 927, 1059
RsaNI	GTAC	7 cut(s)	77, 417, 553, 615, 832, 926, 1058
RseI	CAYNNNNRTG	2 cut(s)	998, 1049
SaqAI	TTAA	3 cut(s)	237, 645, 1308
SatI	GCNGC	1 cut(s)	105
Sau3AI	GATC	5 cut(s)	601, 631, 735, 877, 1281
Sau96I	GGNCC	3 cut(s)	119, 1115, 1161
SchI	GAGTC	3 cut(s)	122, 827, 1306
ScrFI	CCNGG	3 cut(s)	1062, 1119, 1245
SduI	GDGCHC	1 cut(s)	1027
SexAI	ACCWGGT	1 cut(s)	1117
SfaNI	GCATC	5 cut(s)	189, 950, 1068, 1133, 1272
Sfr274I	CTCGAG	1 cut(s)	1102
SinI	GGWCC	2 cut(s)	1115, 1161
SlaI	CTCGAG	1 cut(s)	1102
SmiMI	CAYNNNNRTG	2 cut(s)	998, 1049
SmlI	CTYRAG	1 cut(s)	1102
SmoI	CTYRAG	1 cut(s)	1102
SnaBI	TACGTA	1 cut(s)	618
Sse9I	AATT	8 cut(s)	12, 207, 285, 311, 423, 459, 917, 989
SspI	AATATT	1 cut(s)	406
SspMI	CTAG	3 cut(s)	380, 548, 753
StyD4I	CCNGG	3 cut(s)	1060, 1117, 1243
StyI	CCWWGG	1 cut(s)	1028
TaaI	ACNGT	5 cut(s)	43, 100, 370, 1051, 1233
TaiI	ACGT	2 cut(s)	620, 850
TaqI	TCGA	1 cut(s)	1103
TasI	AATT	8 cut(s)	12, 207, 285, 311, 423, 459, 917, 989
TatI	WGTACW	4 cut(s)	416, 552, 831, 925
TfiI	GAWTC	5 cut(s)	66, 214, 340, 670, 1248
Tru1I	TTAA	3 cut(s)	237, 645, 1308
Tru9I	TTAA	3 cut(s)	237, 645, 1308
TscAI	CASTG	3 cut(s)	87, 160, 1054
TseFI	GTSAC	1 cut(s)	94
TseI	GCWGC	1 cut(s)	104
Tsp45I	GTSAC	1 cut(s)	94
TspDTI	ATGAA	7 cut(s)	58, 398, 596, 606, 711, 761, 982
TspRI	CASTG	3 cut(s)	87, 160, 1054
Van91I	CCANNNNNTGG	1 cut(s)	209
VpaK11BI	GGWCC	2 cut(s)	1115, 1161
VspI	ATTAAT	1 cut(s)	645
XapI	RAATTY	3 cut(s)	311, 423, 989
XceI	RCATGY	1 cut(s)	34
XhoI	CTCGAG	1 cut(s)	1102
XmiI	GTMKAC	1 cut(s)	1300
XspI	CTAG	3 cut(s)	380, 548, 753
Zsp2I	ATGCAT	2 cut(s)	391, 1148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.