Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001419

Physical Location & Seq

Genomic Coordinates Reverse (-)

16725978 .. 16730806

Gene Structure 4829 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0121500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGCATCCCTCACCTCACAACTCCCAATCCTCCTCTTCCTCTTTGTCACCGCTTTCACTTCCGCAGACTCCCAGTCGTTCATCGGCGTCAACTACGGCCAGGTCGCCGACAACCTCCCGGCGCCGGCGGCCACCGCCAAGCTCCTCCAGTCCACCGCCATCAAGCAAGTCCGCCTCTACGGATCCGACCCCGACGTCATCAAGGCCCTGGCCAACACCGGCATCGGCATCGTCATCGGAATCGCCAACGGCGCCATCCCCTCCCTCGCCGCCGATCCCAACGCCGCCGTCCAGTGGATCAACTCGAACGTCGTCCCGTTCTACCCGGCCAGCAATATCACCCTCATCAACGTCGGCAATGAGGTCCTCTTCTCCAACGACCAGGGCCTCATCTCGCAGCTCCTCCCCGCCATGCGAAATGTCCAGTCTGCCCTCGCCGCCGCCTCCCTCGGCGGGAAGGTCCGCGTCTCCTCCGTCCACGCCATGACGTTGCTGTCGCAGTCCGACCCGCCCTCCTCGGGTCGGTTCAACCCGGCGTTGGTCGACGTCCTCAAGGGGCTGCTGGCGTTCCAGAGGGACAATGCCTCGCCCTTCGCAGTCAACCCGTACCCTTTTTTCGCCTACCAGAGCGACCCGAGACCCGAAACGCTCGCGTTTTGCCTCTTCCAGCCCAACGCGGGACGAGTCGACCCGGGCTCCGGGATTAAGTACATGAACATGTTCGATGCTCAGGTTGATGCTGTGAAGTCTGCCCTGAATGCAATTGGATTCAATGACATTGATATTTTGGTGGCCGAGACAGGATGGCCATACCGCGGAGATAGCAATGAAGTTGGACCTAGTGTTGAGAATGCAAAGGCATACAATGGCAATTTGATTAAGCATCTTAGATCCATGGTTGGGACTCCATTGATTCCTGGAAAACCTGTGGAGACATACATATTTGCACTCTATGATGAGAATCTGAAACCTGGTCCAACCTCCGAGCGATCGTTCGGGCTGTTCAAGCCTGATTTATCTGCCACTTATGATGCTGGTCTCTCAAAGAGTAGCCAGACTCCCTCAACACCATCAGGGACTCCTTCACCGAAGCCTACTCCTTCACCTAAGCCTACTACTTCATCAAAGTGGTGCGTGCCCAAAACTGGTGGCGTTTCTGATGCTCAGTTGCAGGCAAATCTCGACTATGCTTGTGGCCATGGAATTGATTGCAGCGCAATCCAACCCGGAGGTGCCTGTTTTGACCCAAACACAGTAGCATCCCATGCTGCCTACGCCATGAATCTTTACTACCATACTGTTGGCACAGATCCAATGAATTGTGATTTCTCACAAACAGCAACACTGACCTCCACAAACCCCAGTTACAATTCTTGTGTTTACCCTGGTGGAGGAAGTACTAGCAAACTACCTTTCGAAGCAGGGAAGGTTGATACGATGTCAATTAATGGATCTTCTAAGGTTGGAAATCTGTTAAGTATAAGGAATAAGGTCCTGGTGTACCTTTTTTTGTTTTTAATTTATAGCTTATCCCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1

Protein Analysis

512

Amino Acids

54.05

Weight (kDa)

5.97

Isoelectric Point (pI)

35.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	28 - 344	1e-76	Glycosyl hydrolases family 17
X8	PF07983	376 - 448	5.3e-20	X8 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16970 AT2G16980 AT2G16980 AT2G16980 AT2G16980 AT2G16980 AT2G16980 AT2G16990 AT2G16990 AT2G16990 AT2G16990 AT2G16990 AT2G16990 AT2G16990 AT2G16990
fragaria_vesca	FvH4_2g15722 FvH4_2g15730 FvH4_2g15730 FvH4_2g15730 FvH4_2g15730 FvH4_2g15730
malus_domestica	MD05G1126300.v1.1 MD10G1129100.v1.1
prunus_persica	Prupe.8G169700_v2.0.a1 Prupe.8G169700_v2.0.a1 Prupe.8G169700_v2.0.a1
pyrus_communis	pycom05g12210 pycom10g11070
rosa_chinensis	RchiOBHm_Chr6g0279031 RchiOBHm_Chr6g0279041
rosa_laevigata	RLG00000013171
rosa_multiflora	Rmu_sc0002080.1_g000008 Rmu_sc0002080.1_g000013
rosa_roxburghii	Rroxscaffold_7G00189190
rosa_rugosa	Rorug06G0121300 Rorug06G0121400.1 Rorug06G0121500 Rorug06G0121600
rosa_samantha	Rh6AG230600 Rh6BG235400 Rh6CG237400 Rh6DG229200
rosa_wichuraiana	Rw0G017030 Rw0G021110 Rw6G020180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	194, 493
AatII	GACGTC	2 cut(s)	198, 549
AccB1I	GGYRCC	3 cut(s)	121, 251, 1232
AccI	GTMKAC	2 cut(s)	543, 687
AccII	CGCG	4 cut(s)	465, 653, 677, 816
AclWI	GGATC	7 cut(s)	177, 190, 269, 305, 885, 1304, 1459
AcoI	YGGCCR	7 cut(s)	97, 129, 210, 327, 792, 806, 1195
AcyI	GRCGYC	5 cut(s)	87, 122, 195, 252, 546
AfaI	GTAC	4 cut(s)	608, 710, 1399, 1502
AflIII	ACRYGT	1 cut(s)	717
AgsI	TTSAA	3 cut(s)	529, 772, 1006
AhdI	GACNNNNNGTC	1 cut(s)	73
AjnI	CCWGG	7 cut(s)	99, 207, 381, 916, 970, 1384, 1494
AluBI	AGCT	3 cut(s)	142, 400, 1527
AluI	AGCT	3 cut(s)	142, 400, 1527
Alw26I	GTCTC	5 cut(s)	472, 631, 791, 926, 1043
AlwI	GGATC	7 cut(s)	177, 190, 269, 305, 885, 1304, 1459
Ama87I	CYCGRG	3 cut(s)	517, 634, 691
AoxI	GGCC	9 cut(s)	97, 129, 204, 210, 327, 385, 792, 806, 1195
ApeKI	GCWGC	4 cut(s)	397, 559, 1212, 1268
AseI	ATTAAT	1 cut(s)	1446
Asp700I	GAANNNNTTC	1 cut(s)	719
AspLEI	GCGC	3 cut(s)	124, 254, 1217
AspS9I	GGNCC	7 cut(s)	205, 364, 385, 460, 836, 974, 1492
AsuC2I	CCSGG	7 cut(s)	119, 326, 533, 692, 693, 700, 1227
AsuHPI	GGTGA	5 cut(s)	4, 40, 331, 1077, 1095
AsuII	TTCGAA	1 cut(s)	1416
AvaI	CYCGRG	3 cut(s)	517, 634, 691
AvaII	GGWCC	5 cut(s)	364, 460, 836, 974, 1492
BaeGI	GKGCMC	1 cut(s)	1140
BalI	TGGCCA	3 cut(s)	212, 808, 1197
BamHI	GGATCC	1 cut(s)	182
BanI	GGYRCC	3 cut(s)	121, 251, 1232
BanII	GRGCYC	1 cut(s)	698
BbvI	GCAGC	4 cut(s)	409, 546, 1224, 1255
BccI	CCATC	4 cut(s)	167, 263, 798, 1078
BceAI	ACGGC	3 cut(s)	112, 265, 272
BcgI	CGANNNNNNTGC	4 cut(s)	211, 217, 245, 251
BciT130I	CCWGG	7 cut(s)	101, 209, 383, 918, 972, 1386, 1496
BcnI	CCSGG	7 cut(s)	119, 326, 533, 692, 693, 700, 1227
BcoDI	GTCTC	5 cut(s)	472, 631, 791, 926, 1043
BfaI	CTAG	2 cut(s)	840, 1401
BfoI	RGCGCY	2 cut(s)	125, 255
BisI	GCNGC	9 cut(s)	129, 270, 285, 398, 438, 441, 560, 1213, 1269
BlsI	GCNGC	9 cut(s)	130, 271, 286, 399, 439, 442, 561, 1214, 1270
BmcAI	AGTACT	1 cut(s)	1399
Bme18I	GGWCC	5 cut(s)	364, 460, 836, 974, 1492
BmeRI	GACNNNNNGTC	1 cut(s)	73
BmeT110I	CYCGRG	3 cut(s)	517, 634, 691
BmgT120I	GGNCC	7 cut(s)	205, 364, 385, 460, 836, 974, 1492
BmiI	GGNNCC	5 cut(s)	123, 184, 253, 697, 1234
BmrI	ACTGGG	2 cut(s)	67, 1356
BmsI	GCATC	9 cut(s)	14, 231, 237, 715, 727, 892, 1021, 1150, 1268
BmuI	ACTGGG	2 cut(s)	67, 1356
BpmI	CTGGAG	1 cut(s)	131
Bpu10I	CCTNAGC	2 cut(s)	729, 1107
Bpu14I	TTCGAA	1 cut(s)	1416
BpuEI	CTTGAG	1 cut(s)	536
BpuMI	CCSGG	7 cut(s)	119, 326, 533, 692, 693, 700, 1227
BsaBI	GATNNNNATC	1 cut(s)	960
BsaHI	GRCGYC	5 cut(s)	87, 122, 195, 252, 546
BsaI	GGTCTC	2 cut(s)	631, 1043
BsaJI	CCNNGG	9 cut(s)	207, 382, 448, 516, 691, 814, 894, 1198, 1384
BsaXI	ACNNNNNCTCC	4 cut(s)	497, 527, 680, 710
Bse118I	RCCGGY	2 cut(s)	124, 218
Bse1I	ACTGG	6 cut(s)	73, 148, 292, 424, 1150, 1362
Bse3DI	GCAATG	2 cut(s)	364, 832
Bse8I	GATNNNNATC	1 cut(s)	960
BseBI	CCWGG	7 cut(s)	101, 209, 383, 918, 972, 1386, 1496
BseDI	CCNNGG	9 cut(s)	207, 382, 448, 516, 691, 814, 894, 1198, 1384
BseGI	GGATG	4 cut(s)	5, 255, 809, 1259
BseJI	GATNNNNATC	1 cut(s)	960
BseMI	GCAATG	2 cut(s)	364, 832
BseMII	CTCAG	2 cut(s)	743, 1178
BseNI	ACTGG	6 cut(s)	73, 148, 292, 424, 1150, 1362
BseRI	GAGGAG	5 cut(s)	23, 134, 392, 460, 505
BseSI	GKGCMC	1 cut(s)	1140
BseXI	GCAGC	4 cut(s)	409, 546, 1224, 1255
Bsh1236I	CGCG	4 cut(s)	465, 653, 677, 816
Bsh1285I	CGRYCG	1 cut(s)	992
BshFI	GGCC	9 cut(s)	99, 131, 206, 212, 329, 387, 794, 808, 1197
BshNI	GGYRCC	3 cut(s)	121, 251, 1232
BsiEI	CGRYCG	1 cut(s)	992
BsiHKCI	CYCGRG	3 cut(s)	517, 634, 691
BsiSI	CCGG	8 cut(s)	119, 125, 219, 326, 533, 692, 699, 1227
BslFI	GGGAC	5 cut(s)	299, 590, 693, 916, 1090
BsmAI	GTCTC	5 cut(s)	472, 631, 791, 926, 1043
BsmBI	CGTCTC	1 cut(s)	472
BsmFI	GGGAC	5 cut(s)	299, 590, 693, 916, 1090
BsmI	GAATGC	2 cut(s)	763, 856
BsnI	GGCC	9 cut(s)	99, 131, 206, 212, 329, 387, 794, 808, 1197
Bso31I	GGTCTC	2 cut(s)	631, 1043
BsoBI	CYCGRG	3 cut(s)	517, 634, 691
Bsp119I	TTCGAA	1 cut(s)	1416
Bsp1286I	GDGCHC	2 cut(s)	698, 1140
Bsp143I	GATC	7 cut(s)	182, 274, 297, 890, 989, 1309, 1451
Bsp19I	CCATGG	2 cut(s)	894, 1198
BspANI	GGCC	9 cut(s)	99, 131, 206, 212, 329, 387, 794, 808, 1197
BspCNI	CTCAG	2 cut(s)	742, 1177
BspFNI	CGCG	4 cut(s)	465, 653, 677, 816
BspLI	GGNNCC	5 cut(s)	123, 184, 253, 697, 1234
BspPI	GGATC	7 cut(s)	177, 190, 269, 305, 885, 1304, 1459
BspT104I	TTCGAA	1 cut(s)	1416
BspT107I	GGYRCC	3 cut(s)	121, 251, 1232
BspTNI	GGTCTC	2 cut(s)	631, 1043
BsrDI	GCAATG	2 cut(s)	364, 832
BsrFI	RCCGGY	2 cut(s)	124, 218
BsrI	ACTGG	6 cut(s)	73, 148, 292, 424, 1150, 1362
BssAI	RCCGGY	2 cut(s)	124, 218
BssECI	CCNNGG	9 cut(s)	207, 382, 448, 516, 691, 814, 894, 1198, 1384
BssMI	GATC	7 cut(s)	182, 274, 297, 890, 989, 1309, 1451
BssNI	GRCGYC	5 cut(s)	87, 122, 195, 252, 546
BssT1I	CCWWGG	2 cut(s)	894, 1198
Bst2UI	CCWGG	7 cut(s)	101, 209, 383, 918, 972, 1386, 1496
Bst4CI	ACNGT	2 cut(s)	1255, 1300
Bst6I	CTCTTC	3 cut(s)	41, 374, 668
BstACI	GRCGYC	5 cut(s)	87, 122, 195, 252, 546
BstAPI	GCANNNNNTGC	1 cut(s)	1265
BstBI	TTCGAA	1 cut(s)	1416
BstC8I	GCNNGC	6 cut(s)	126, 331, 564, 651, 1136, 1173
BstDEI	CTNAG	5 cut(s)	729, 887, 1107, 1164, 1458
BstDSI	CCRYGG	3 cut(s)	814, 894, 1198
BstENI	CCTNNNNNAGG	1 cut(s)	1389
BstF5I	GGATG	4 cut(s)	5, 255, 809, 1259
BstFNI	CGCG	4 cut(s)	465, 653, 677, 816
BstH2I	RGCGCY	2 cut(s)	125, 255
BstHHI	GCGC	3 cut(s)	124, 254, 1217
BstKTI	GATC	7 cut(s)	185, 277, 300, 893, 992, 1312, 1454
BstMAI	GTCTC	5 cut(s)	472, 631, 791, 926, 1043
BstMBI	GATC	7 cut(s)	182, 274, 297, 890, 989, 1309, 1451
BstMCI	CGRYCG	1 cut(s)	992
BstMWI	GCNNNNNNNGC	9 cut(s)	128, 134, 251, 437, 758, 822, 1006, 1265, 1274
BstNI	CCWGG	7 cut(s)	101, 209, 383, 918, 972, 1386, 1496
BstNSI	RCATGY	1 cut(s)	721
BstSLI	GKGCMC	1 cut(s)	1140
BstUI	CGCG	4 cut(s)	465, 653, 677, 816
BstV1I	GCAGC	4 cut(s)	409, 546, 1224, 1255
BstX2I	RGATCY	4 cut(s)	182, 890, 1309, 1451
BstXI	CCANNNNNNTGG	1 cut(s)	1301
BstYI	RGATCY	4 cut(s)	182, 890, 1309, 1451
BsuRI	GGCC	9 cut(s)	99, 131, 206, 212, 329, 387, 794, 808, 1197
BtgI	CCRYGG	3 cut(s)	814, 894, 1198
BtsCI	GGATG	4 cut(s)	5, 255, 809, 1259
BtsIMutI	CAGTG	2 cut(s)	299, 1343
Cac8I	GCNNGC	6 cut(s)	126, 331, 564, 651, 1136, 1173
CfoI	GCGC	3 cut(s)	124, 254, 1217
Cfr10I	RCCGGY	2 cut(s)	124, 218
Cfr13I	GGNCC	7 cut(s)	205, 364, 385, 460, 836, 974, 1492
Cfr42I	CCGCGG	1 cut(s)	817
Cfr9I	CCCGGG	1 cut(s)	691
CseI	GACGC	2 cut(s)	76, 454
CsiI	ACCWGGT	1 cut(s)	970
Csp6I	GTAC	4 cut(s)	607, 709, 1398, 1501
CspCI	CAANNNNNGTGG	2 cut(s)	1129, 1164
CviAII	CATG	8 cut(s)	412, 484, 712, 718, 895, 1199, 1265, 1279
CviQI	GTAC	4 cut(s)	607, 709, 1398, 1501
DdeI	CTNAG	5 cut(s)	729, 887, 1107, 1164, 1458
DinI	GGCGCC	2 cut(s)	123, 253
DpnI	GATC	7 cut(s)	184, 276, 299, 892, 991, 1311, 1453
DpnII	GATC	7 cut(s)	182, 274, 297, 890, 989, 1309, 1451
DrdI	GACNNNNNNGTC	2 cut(s)	194, 493
DriI	GACNNNNNGTC	1 cut(s)	73
DseDI	GACNNNNNNGTC	2 cut(s)	194, 493
EaeI	YGGCCR	7 cut(s)	97, 129, 210, 327, 792, 806, 1195
Eam1104I	CTCTTC	3 cut(s)	41, 374, 668
Eam1105I	GACNNNNNGTC	1 cut(s)	73
EarI	CTCTTC	3 cut(s)	41, 374, 668
EciI	GGCGGA	1 cut(s)	161
Eco130I	CCWWGG	2 cut(s)	894, 1198
Eco24I	GRGCYC	1 cut(s)	698
Eco31I	GGTCTC	2 cut(s)	631, 1043
Eco47I	GGWCC	5 cut(s)	364, 460, 836, 974, 1492
Eco88I	CYCGRG	3 cut(s)	517, 634, 691
EcoNI	CCTNNNNNAGG	1 cut(s)	1389
EcoO109I	RGGNCCY	4 cut(s)	205, 364, 385, 1492
EcoRII	CCWGG	7 cut(s)	99, 207, 381, 916, 970, 1384, 1494
EcoT14I	CCWWGG	2 cut(s)	894, 1198
EcoT38I	GRGCYC	1 cut(s)	698
EgeI	GGCGCC	2 cut(s)	123, 253
EheI	GGCGCC	2 cut(s)	123, 253
ErhI	CCWWGG	2 cut(s)	894, 1198
Esp3I	CGTCTC	1 cut(s)	472
FaeI	CATG	8 cut(s)	415, 487, 715, 721, 898, 1202, 1268, 1282
FaqI	GGGAC	5 cut(s)	299, 590, 693, 916, 1090
FatI	CATG	8 cut(s)	411, 483, 711, 717, 894, 1198, 1264, 1278
FauI	CCCGC	4 cut(s)	415, 446, 516, 670
FblI	GTMKAC	2 cut(s)	543, 687
Fnu4HI	GCNGC	9 cut(s)	129, 270, 285, 398, 438, 441, 560, 1213, 1269
FokI	GGATG	3 cut(s)	242, 816, 1246
FriOI	GRGCYC	1 cut(s)	698
Fsp4HI	GCNGC	9 cut(s)	129, 270, 285, 398, 438, 441, 560, 1213, 1269
FspBI	CTAG	2 cut(s)	840, 1401
GlaI	GCGC	3 cut(s)	123, 253, 1216
GluI	GCNGC	9 cut(s)	129, 270, 285, 398, 438, 441, 560, 1213, 1269
GsuI	CTGGAG	1 cut(s)	131
HaeII	RGCGCY	2 cut(s)	125, 255
HaeIII	GGCC	9 cut(s)	99, 131, 206, 212, 329, 387, 794, 808, 1197
HapII	CCGG	8 cut(s)	119, 125, 219, 326, 533, 692, 699, 1227
HgaI	GACGC	2 cut(s)	76, 454
HhaI	GCGC	3 cut(s)	124, 254, 1217
Hin1I	GRCGYC	5 cut(s)	87, 122, 195, 252, 546
Hin1II	CATG	8 cut(s)	415, 487, 715, 721, 898, 1202, 1268, 1282
Hin6I	GCGC	3 cut(s)	122, 252, 1215
HinP1I	GCGC	3 cut(s)	122, 252, 1215
HincII	GTYRAC	4 cut(s)	91, 544, 601, 688
HindII	GTYRAC	4 cut(s)	91, 544, 601, 688
HpaII	CCGG	8 cut(s)	119, 125, 219, 326, 533, 692, 699, 1227
HphI	GGTGA	5 cut(s)	4, 40, 331, 1077, 1095
Hpy166II	GTNNAC	8 cut(s)	91, 153, 478, 544, 601, 688, 1381, 1501
Hpy188I	TCNGA	7 cut(s)	187, 239, 505, 966, 985, 1159, 1538
Hpy188III	TCNNGA	2 cut(s)	571, 1181
Hpy8I	GTNNAC	8 cut(s)	91, 153, 478, 544, 601, 688, 1381, 1501
Hpy99I	CGWCG	4 cut(s)	197, 314, 356, 548
HpyAV	CCTTC	5 cut(s)	451, 601, 1092, 1110, 1420
HpyCH4III	ACNGT	2 cut(s)	1255, 1300
HpyCH4IV	ACGT	5 cut(s)	195, 309, 351, 488, 546
HpyCH4V	TGCA	5 cut(s)	761, 854, 947, 1171, 1212
HpyF10VI	GCNNNNNNNGC	9 cut(s)	128, 134, 251, 437, 758, 822, 1006, 1265, 1274
HpyF3I	CTNAG	5 cut(s)	729, 887, 1107, 1164, 1458
HpySE526I	ACGT	5 cut(s)	195, 309, 351, 488, 546
Hsp92I	GRCGYC	5 cut(s)	87, 122, 195, 252, 546
Hsp92II	CATG	8 cut(s)	415, 487, 715, 721, 898, 1202, 1268, 1282
HspAI	GCGC	3 cut(s)	122, 252, 1215
KasI	GGCGCC	2 cut(s)	121, 251
KroI	GCCGGC	1 cut(s)	124
KroNI	GCCGGC	1 cut(s)	126
KspI	CCGCGG	1 cut(s)	817
Kzo9I	GATC	7 cut(s)	182, 274, 297, 890, 989, 1309, 1451
LmnI	GCTCC	3 cut(s)	147, 405, 701
Lsp1109I	GCAGC	4 cut(s)	409, 546, 1224, 1255
LweI	GCATC	9 cut(s)	14, 231, 237, 715, 727, 892, 1021, 1150, 1268
MabI	ACCWGGT	1 cut(s)	970
MaeI	CTAG	2 cut(s)	840, 1401
MaeII	ACGT	5 cut(s)	195, 309, 351, 488, 546
MaeIII	GTNAC	2 cut(s)	46, 1364
MalI	GATC	7 cut(s)	184, 276, 299, 892, 991, 1311, 1453
MboI	GATC	7 cut(s)	182, 274, 297, 890, 989, 1309, 1451
MboII	GAAGA	4 cut(s)	28, 361, 655, 1446
MfeI	CAATTG	1 cut(s)	762
MflI	RGATCY	4 cut(s)	182, 890, 1309, 1451
MhlI	GDGCHC	2 cut(s)	698, 1140
MlsI	TGGCCA	3 cut(s)	212, 808, 1197
MluCI	AATT	7 cut(s)	762, 871, 1203, 1318, 1369, 1443, 1518
MluNI	TGGCCA	3 cut(s)	212, 808, 1197
Mly113I	GGCGCC	2 cut(s)	122, 252
MlyI	GAGTC	5 cut(s)	62, 693, 898, 1051, 1072
MmeI	TCCRAC	7 cut(s)	210, 399, 528, 814, 1001, 1246, 1444
Mox20I	TGGCCA	3 cut(s)	212, 808, 1197
MreI	CGCCGGCG	1 cut(s)	124
MroNI	GCCGGC	1 cut(s)	124
MroXI	GAANNNNTTC	1 cut(s)	719
MscI	TGGCCA	3 cut(s)	212, 808, 1197
MseI	TTAA	5 cut(s)	705, 879, 1446, 1475, 1517
MslI	CAYNNNNRTG	2 cut(s)	716, 1126
Msp20I	TGGCCA	3 cut(s)	212, 808, 1197
MspA1I	CMGCKG	1 cut(s)	816
MspI	CCGG	8 cut(s)	119, 125, 219, 326, 533, 692, 699, 1227
MunI	CAATTG	1 cut(s)	762
Mva1269I	GAATGC	2 cut(s)	763, 856
MvaI	CCWGG	7 cut(s)	101, 209, 383, 918, 972, 1386, 1496
MvnI	CGCG	4 cut(s)	465, 653, 677, 816
MwoI	GCNNNNNNNGC	9 cut(s)	128, 134, 251, 437, 758, 822, 1006, 1265, 1274
NaeI	GCCGGC	1 cut(s)	126
NarI	GGCGCC	2 cut(s)	122, 252
NciI	CCSGG	7 cut(s)	119, 326, 533, 692, 693, 700, 1227
NcoI	CCATGG	2 cut(s)	894, 1198
NdeII	GATC	7 cut(s)	182, 274, 297, 890, 989, 1309, 1451
NgoMIV	GCCGGC	1 cut(s)	124
NlaIII	CATG	8 cut(s)	415, 487, 715, 721, 898, 1202, 1268, 1282
NlaIV	GGNNCC	5 cut(s)	123, 184, 253, 697, 1234
NmeAIII	GCCGAG	2 cut(s)	429, 820
NmuCI	GTSAC	1 cut(s)	46
NspI	RCATGY	1 cut(s)	721
NspV	TTCGAA	1 cut(s)	1416
PciI	ACATGT	1 cut(s)	717
PctI	GAATGC	2 cut(s)	763, 856
PdiI	GCCGGC	1 cut(s)	126
PdmI	GAANNNNTTC	1 cut(s)	719
PfeI	GAWTC	5 cut(s)	240, 768, 913, 961, 1282
PfoI	TCCNGGA	2 cut(s)	698, 916
PkrI	GCNGC	9 cut(s)	130, 271, 286, 399, 439, 442, 561, 1214, 1270
Ple19I	CGATCG	1 cut(s)	992
PleI	GAGTC	5 cut(s)	62, 692, 898, 1051, 1072
PluTI	GGCGCC	2 cut(s)	125, 255
PpsI	GAGTC	5 cut(s)	62, 692, 898, 1051, 1072
PpuMI	RGGWCCY	2 cut(s)	364, 1492
PscI	ACATGT	1 cut(s)	717
PshBI	ATTAAT	1 cut(s)	1446
Psp5II	RGGWCCY	2 cut(s)	364, 1492
Psp6I	CCWGG	7 cut(s)	99, 207, 381, 916, 970, 1384, 1494
PspGI	CCWGG	7 cut(s)	99, 207, 381, 916, 970, 1384, 1494
PspN4I	GGNNCC	5 cut(s)	123, 184, 253, 697, 1234
PspPI	GGNCC	7 cut(s)	205, 364, 385, 460, 836, 974, 1492
PspPPI	RGGWCCY	2 cut(s)	364, 1492
PsuI	RGATCY	4 cut(s)	182, 890, 1309, 1451
PvuI	CGATCG	1 cut(s)	992
RsaI	GTAC	4 cut(s)	608, 710, 1399, 1502
RsaNI	GTAC	4 cut(s)	607, 709, 1398, 1501
RseI	CAYNNNNRTG	2 cut(s)	716, 1126
SacII	CCGCGG	1 cut(s)	817
SalI	GTCGAC	2 cut(s)	542, 686
SaqAI	TTAA	5 cut(s)	705, 879, 1446, 1475, 1517
SatI	GCNGC	9 cut(s)	129, 270, 285, 398, 438, 441, 560, 1213, 1269
Sau3AI	GATC	7 cut(s)	182, 274, 297, 890, 989, 1309, 1451
Sau96I	GGNCC	7 cut(s)	205, 364, 385, 460, 836, 974, 1492
ScaI	AGTACT	1 cut(s)	1399
SchI	GAGTC	5 cut(s)	62, 693, 898, 1051, 1072
SduI	GDGCHC	2 cut(s)	698, 1140
SexAI	ACCWGGT	1 cut(s)	970
SfaNI	GCATC	9 cut(s)	14, 231, 237, 715, 727, 892, 1021, 1150, 1268
SfoI	GGCGCC	2 cut(s)	123, 253
Sfr303I	CCGCGG	1 cut(s)	817
SfuI	TTCGAA	1 cut(s)	1416
SgrAI	CRCCGGYG	1 cut(s)	124
SgrBI	CCGCGG	1 cut(s)	817
SinI	GGWCC	5 cut(s)	364, 460, 836, 974, 1492
SmaI	CCCGGG	1 cut(s)	693
SmiMI	CAYNNNNRTG	2 cut(s)	716, 1126
SmlI	CTYRAG	1 cut(s)	551
SmoI	CTYRAG	1 cut(s)	551
Sse9I	AATT	7 cut(s)	762, 871, 1203, 1318, 1369, 1443, 1518
SspDI	GGCGCC	2 cut(s)	121, 251
SspMI	CTAG	2 cut(s)	840, 1401
StyI	CCWWGG	2 cut(s)	894, 1198
TaaI	ACNGT	2 cut(s)	1255, 1300
TaiI	ACGT	5 cut(s)	198, 312, 354, 491, 549
TaqI	TCGA	6 cut(s)	305, 543, 687, 723, 1182, 1416
TasI	AATT	7 cut(s)	762, 871, 1203, 1318, 1369, 1443, 1518
TatI	WGTACW	2 cut(s)	708, 1397
TauI	GCSGC	5 cut(s)	131, 272, 287, 440, 443
TfiI	GAWTC	5 cut(s)	240, 768, 913, 961, 1282
Tru1I	TTAA	5 cut(s)	705, 879, 1446, 1475, 1517
Tru9I	TTAA	5 cut(s)	705, 879, 1446, 1475, 1517
TscAI	CASTG	2 cut(s)	299, 1350
TseFI	GTSAC	1 cut(s)	46
TseI	GCWGC	4 cut(s)	397, 559, 1212, 1268
Tsp45I	GTSAC	1 cut(s)	46
TspDTI	ATGAA	6 cut(s)	70, 728, 843, 1110, 1295, 1331
TspGWI	ACGGA	2 cut(s)	195, 463
TspMI	CCCGGG	1 cut(s)	691
TspRI	CASTG	2 cut(s)	299, 1350
VpaK11BI	GGWCC	5 cut(s)	364, 460, 836, 974, 1492
VspI	ATTAAT	1 cut(s)	1446
XagI	CCTNNNNNAGG	1 cut(s)	1389
XceI	RCATGY	1 cut(s)	721
XmaI	CCCGGG	1 cut(s)	691
XmiI	GTMKAC	2 cut(s)	543, 687
XmnI	GAANNNNTTC	1 cut(s)	719
XspI	CTAG	2 cut(s)	840, 1401
ZraI	GACGTC	2 cut(s)	196, 547
ZrmI	AGTACT	1 cut(s)	1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.