AT2G29940

ABC transporter G family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0007618
Physical Location & Seq
Forward (+)
12759973 .. 12766794
6822 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G29940.1

Sequence Viewer

Length: 4281 bp
ATGGCGGCGGCTTCGAATGGGAGTGAGTATTTCGAATTCGATGTAGAAACAGGAAGAGAATCGTTCGCGCGGCCGTCTAACGCCGAGACAGTGGAGCAAGATGAGGAAGATCTACGGTGGGCGGCGATCGGAAGATTACCGTCGCAGAGACAAGGGACTCATAATGCGATTCTGCGTCGGTCGCAAACGCAAACGCAGACTTCTGGTTACGCTGATGGAAACGTGGTTCAAACGATTGATGTGAAGAAATTGGATCGTGCGGATCGTGAGATGTTGGTTCGTCAAGCTCTTGCTACTAGTGATCAAGATAATTTCAAGCTTCTCTCTGCTATTAAAGAACGTCTTGATCGAGTTGGTATGGAGGTTCCGAAAATCGAAGTGCGGTTCGAGAATTTGAATATTGAAGCTGATGTTCAAGCTGGTACAAGAGCTTTGCCTACTTTGGTTAATGTCTCTCGTGATTTCTTTGAGCGTTGCTTAAGCAGCTTGAGGATAATCAAGCCTAGGAAACACAAGCTTAATATTTTGAAAGATATTAGTGGGATTATCAAACCAGGAAGGATGACTTTGTTGTTAGGACCACCGGGTTCCGGAAAATCGACGTTGCTTCTTGCTCTTGCAGGGAAGCTTGATAAGAGTTTAAAGAAAACGGGTAACATTACCTATAATGGAGAGAATCTTAACAAGTTTCATGTTAAAAGAACTTCAGCATATATAAGTCAAACAGATAATCACATTGCTGAACTCACTGTTCGTGAAACTCTTGATTTCGCTGCGAGATGTCAAGGCGCAAGCGAAGGATTTGCAGGTTACATGAAAGATCTAACCCGATTAGAGAAAGAGAGGGGTATACGTCCTTCTTCTGAGATTGATGCGTTTATGAAGGCTGCTTCTGTCAAAGGCGAAAAGCATAGTGTTTCGACAGATTATGTGCTTAAAGTACTTGGTCTTGATGTATGTTCTGATACAATGGTTGGTAATGATATGATGAGAGGTGTTTCAGGAGGTCAAAGGAAAAGAGTTACAACAGGAGAAATGACTGTTGGGCCAAGAAAAACGTTGTTTATGGATGAAATATCTACTGGTCTTGATAGTTCAACAACTTTCCAGATTGTCAAATGTATCAGAAACTTCGTTCATCTAATGGATGCAACTGTTCTTATGGCACTTCTTCAGCCTGCACCAGAAACATTTGACTTGTTTGATGACTTAATTCTTCTATCAGAAGGTTACATGGTATATCAAGGTCCTCGAGAAGATGTGATAGCCTTTTTTGAGTCTCTAGGATTCCGTCTCCCACCGCGTAAAGGTGTGGCAGATTTTCTCCAAGAGGTGACCTCTAAAAAGGATCAAGCTCAATACTGGGCAGATCCTTCGAAGCCATATCAGTTCATTCCTGTCTCAGACATAGCGGCTGCATTCCGTAACTCGAAATACGGGCATGCTGCGGATTCCAAGCTGGCTGCACCATTTGACAAGAAATCTGCGGATCCTTCAGCTTTATGCAGAACAAAATTTGCCATTTCAGGATGGGAAAACCTTAAAGTTTGCTTTGTACGAGAATTATTATTGATCAAACGGCACAAATTTCTTTACACTTTTAGGACATGCCAGGTTGGATTTGTGGGACTTGTCACAGCGACAGTGTTCTTGAAAACTAGATTACACCCAACAAGCGAACAATTTGGCAATGAGTATCTATCTTGCCTTTTCTTCGGGCTAGTCCACATGATGTTCAACGGTTTCTCTGAACTACCTCTCATGATATCGCGTCTCCCGGTTTTTTACAAGCAAAGGGATAACTCCTTTCATCCTGCTTGGTCATGGTCTATTGCCAGCTGGCTCTTGCGTGTGCCTTACTCTGTCCTTGAAGCTGTTGTCTGGAGTGGTGTAGTATACTTCACTGTGGGACTTGCTCCCTCAGCAGGCAGATTTTTCCGATACATGTTACTTCTCTTCTCGGTGCATCAAATGGCTCTCGGTTTATTTCGTATGATGGCTTCTCTAGCAAGGGACATGGTCATTGCCAATACATTCGGATCTGCAGCAATCTTAATAGTGTTCTTGCTTGGTGGATTCGTTATTCCAAAAGCTGATATTAAACCTTGGTGGGTTTGGGGTTTTTGGGTGTCGCCGTTATCCTATGGACAACGTGCCATTGCGGTCAATGAATTCACAGCCACACGGTGGATGACGCCATCAGCTATATCTGATACTACAATTGGACTCAACCTTCTAAAGCTACGTAGCTTTCCAACGAATGACTATTGGTATTGGATTGGAATCGCGGTTCTCATTGGTTATGCAATTCTATTCAATAACGTAGTAACTCTCGCCTTGGCTTATCTTAACCCTCTAAGAAAAGCTCGAGCAGTTGTTTTAGACGATCCCAATGAAGAAACTGCTTTAGTAGCAGATGCAAATCAAGTAATAAGTGAGAAAAAGGGAATGATCCTTCCATTCAAACCATTAACAATGACTTTCCACAATGTCAACTATTATGTTGACATGCCAAAGGAAATGCGTTCTCAAGGTGTACCAGAGACAAGACTACAACTGTTATCAAACGTGAGTGGAGTGTTCTCACCTGGAGTTCTTACAGCTTTAGTTGGATCAAGCGGTGCGGGAAAAACTACGTTGATGGATGTTCTTGCGGGTCGAAAGACAGGTGGATATACCGAGGGAGATATTAGAATCTCTGGTCACCCAAAAGAACAACAAACGTTTGCTAGGATCTCTGGATATGTTGAGCAGAACGATATACACTCTCCTCAAGTCACAGTTGAAGAGTCCTTATGGTTTTCGGCTAGCCTTCGTCTTCCTAAGGAGATCACCAAAGAACAGAAAAAGGAATTTGTGGAACAAGTCATGAGACTTGTAGAGCTTGACACTCTGAGATATGCTTTAGTAGGTTTACCTGGTACCACGGGTCTTTCTACTGAGCAGAGGAAACGTCTAACAATTGCGGTTGAGTTAGTAGCAAATCCATCAATTATTTTCATGGATGAACCAACATCTGGACTTGATGCAAGAGCAGCAGCAATTGTGATGAGAACTGTTAGAAACACTGTTGATACTGGAAGAACAGTGGTTTGCACCATTCATCAACCTAGCATTGACATTTTTGAGGCCTTTGACGAGCTGCTTCTAATGAAACGAGGAGGACAGGTTATATATGGTGGGAAATTGGGTACACACTCGCAGGTTCTGGTAGATTACTTTCAGGGGATTAACGGAGTACCTCCAATCTCAAGTGGTTACAATCCAGCAACTTGGATGCTTGAAGTAACTACACCTGCTTTGGAAGAGAAATATAACATGGAGTTTGCAGATTTATACAAGAAATCTGACCAGTTTAGAGAAGTAGAGGCAAACATCAAGCAACTCAGTGTTCCACCAGAAGGCTCAGAACCAATAAGCTTTACATCAAGATACTCACAAAACCAACTATCTCAATTTCTACTCTGTCTCTGGAAACAGAACCTTGTCTACTGGAGAAGTCCAGAATACAATCTCGTGAGATTAGTCTTCACAACGATCGCTGCGTTTATACTGGGAACAGTTTTCTGGGACATTGGTTCCAAGAGGACTTCCTCACAGGATTTGATCACCGTAATGGGAGCTCTCTACTCGGCTTGTCTGTTTCTTGGAGTTAGTAACGCTTCATCAGTACAACCAATCGTTTCAATCGAAAGAACAGTTTTCTACAGAGAGAAAGCCGCTGGTATGTATGCTCCAATTCCATATGCAGCAGCTCAGGGTCTTGTGGAGATACCTTACATTCTGACCCAAACCATTCTCTACGGTGTCATCACATACTTCACCATTGGCTTTGAAAGAACGTTCAGTAAGTTTGTACTGTATTTGGTGTTCATGTTCCTCACATTCACCTACTTCACCTTCTATGGCATGATGGCGGTTGGTCTCACCCCGAATCAGCATTTAGCCGCTGTGATCTCCTCTGCGTTTTACTCTCTCTGGAATCTCCTATCCGGTTTCCTCGTCCAAAAGCCTTTGATTCCAGTGTGGTGGATATGGTTCTATTACATATGTCCAGTGGCGTGGACACTACAAGGAGTAATCCTTTCGCAGCTTGGTGACGTGGAAAGCATGATCAACGAGCCATTGTTTCATGGCACGGTGAAGGAGTTTATTGAATATTACTTCGGCTACAAGCCAAACATGATTGGTGTATCTGCTGCTGTTCTTGTCGGTTTTTGTGCTCTCTTCTTCTCAGCATTTGCACTTTCAGTCAAATACCTCAACTTCCAGAGAAGATAA

Protein Analysis

1426

Amino Acids

159.87

Weight (kDa)

8.74

Isoelectric Point (pI)

35.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 100 - 151 1.3e-07 ABC-transporter N-terminal
ABC_tran PF00005 176 - 358 1.1e-18 ABC transporter
ABC2_membrane PF01061 513 - 725 1.4e-50 ABC-2 type transporter
PDR_assoc PF08370 730 - 793 1.3e-24 Plant PDR ABC transporter associated
ABC_tran PF00005 854 - 1006 3.2e-22 ABC transporter
ABC2_membrane PF01061 1152 - 1363 1.7e-55 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3304
Acc36I ACCTGC 3 cut(s) 797, 3193, 3304
Acc65I GGTACC 1 cut(s) 2921
AccB1I GGYRCC 1 cut(s) 2921
AccB7I CCANNNNNTGG 2 cut(s) 2187, 3017
AccI GTMKAC 3 cut(s) 850, 1896, 3489
AccII CGCG 5 cut(s) 68, 70, 1303, 1771, 2288
AccIII TCCGGA 1 cut(s) 590
AclI AACGTT 3 cut(s) 1058, 2723, 3842
AcoI YGGCCR 1 cut(s) 71
AcsI RAATTY 6 cut(s) 35, 391, 1514, 1586, 2171, 2852
AcuI CTGAAG 3 cut(s) 690, 1157, 1479
AcyI GRCGYC 1 cut(s) 2195
AdeI CACNNNGTG 1 cut(s) 2187
AfaI GTAC 9 cut(s) 424, 942, 1557, 2538, 2923, 3193, 3240, 3672, 3858
AfiI CCNNNNNNNGG 6 cut(s) 590, 1307, 1925, 2187, 3017, 3401
AflII CTTAAG 1 cut(s) 478
AflIII ACRYGT 1 cut(s) 1944
AhlI ACTAGT 1 cut(s) 296
AjiI CACGTC 1 cut(s) 4102
AjnI CCWGG 4 cut(s) 553, 1611, 2587, 2917
AjuI GAANNNNNNNTTGG 2 cut(s) 1026, 1058
AloI GAACNNNNNNTCC 4 cut(s) 210, 242, 2274, 2306
Alw21I GWGCWC 2 cut(s) 3625, 4225
AlwNI CAGNNNCTG 1 cut(s) 3208
Ama87I CYCGRG 2 cut(s) 1251, 2367
Aor13HI TCCGGA 1 cut(s) 590
AoxI GGCC 3 cut(s) 71, 1046, 3129
ApoI RAATTY 6 cut(s) 35, 391, 1514, 1586, 2171, 2852
Asp718I GGTACC 1 cut(s) 2921
AspA2I CCTAGG 1 cut(s) 503
AspLEI GCGC 2 cut(s) 70, 791
AspS9I GGNCC 3 cut(s) 578, 1046, 1247
AsuC2I CCSGG 2 cut(s) 585, 1778
AsuII TTCGAA 3 cut(s) 14, 33, 1376
AsuNHI GCTAGC 1 cut(s) 2807
AvaI CYCGRG 2 cut(s) 1251, 2367
AvaII GGWCC 2 cut(s) 578, 1247
AvrII CCTAGG 1 cut(s) 503
AxyI CCTNAGG 1 cut(s) 2823
BaeI ACNNNNGTAYC 2 cut(s) 957, 990
BamHI GGATCC 1 cut(s) 1489
BanI GGYRCC 1 cut(s) 2921
BanII GRGCYC 1 cut(s) 3625
BarI GAAGNNNNNNTAC 4 cut(s) 841, 873, 1984, 2016
BauI CACGAG 2 cut(s) 456, 3515
BbsI GAAGAC 2 cut(s) 2810, 3520
Bbv12I GWGCWC 2 cut(s) 3625, 4225
BbvCI CCTCAGC 1 cut(s) 1921
BccI CCATC 7 cut(s) 209, 1524, 1990, 2206, 2635, 2995, 3907
BceAI ACGGC 3 cut(s) 58, 1595, 2119
BcgI CGANNNNNNTGC 4 cut(s) 785, 819, 1356, 1390
BciT130I CCWGG 4 cut(s) 555, 1613, 2589, 2919
BclI TGATCA 4 cut(s) 301, 1572, 3606, 4113
BcnI CCSGG 2 cut(s) 585, 1778
BcuI ACTAGT 1 cut(s) 296
BfaI CTAG 9 cut(s) 297, 504, 1283, 1659, 1721, 2006, 2730, 2808, 3111
BfmI CTRYAG 2 cut(s) 2043, 3706
BfrI CTTAAG 1 cut(s) 478
BfuAI ACCTGC 3 cut(s) 797, 3193, 3304
BglII AGATCT 2 cut(s) 109, 820
BlnI CCTAGG 1 cut(s) 503
BmcAI AGTACT 1 cut(s) 942
Bme1390I CCNGG 6 cut(s) 555, 585, 1613, 1778, 2589, 2919
Bme18I GGWCC 2 cut(s) 578, 1247
BmeT110I CYCGRG 2 cut(s) 1251, 2367
BmgBI CACGTC 1 cut(s) 4102
BmgT120I GGNCC 3 cut(s) 578, 1046, 1247
BmiI GGNNCC 5 cut(s) 366, 589, 1491, 2923, 3580
BmrFI CCNGG 6 cut(s) 555, 585, 1613, 1778, 2589, 2919
BmrI ACTGGG 2 cut(s) 1372, 3563
BmsI GCATC 6 cut(s) 862, 1138, 1975, 2407, 3016, 3267
BmtI GCTAGC 1 cut(s) 2811
BmuI ACTGGG 2 cut(s) 1372, 3563
BpiI GAAGAC 2 cut(s) 2810, 3520
BplI GAGNNNNNCTC 2 cut(s) 1322, 1354
BpmI CTGGAG 3 cut(s) 1903, 2610, 3514
Bpu10I CCTNAGC 2 cut(s) 1921, 3756
Bpu14I TTCGAA 3 cut(s) 14, 33, 1376
BpuEI CTTGAG 4 cut(s) 508, 2514, 2757, 3235
BpuMI CCSGG 2 cut(s) 585, 1778
BsaAI YACGTR 1 cut(s) 2246
BsaBI GATNNNNATC 2 cut(s) 2282, 2421
BsaHI GRCGYC 1 cut(s) 2195
BsaI GGTCTC 1 cut(s) 3929
BsaJI CCNNGG 5 cut(s) 503, 2105, 2337, 2679, 2925
BsaWI WCCGGW 2 cut(s) 590, 3992
BsaXI ACNNNNNCTCC 2 cut(s) 3153, 3183
Bsc4I CCNNNNNNNGG 6 cut(s) 590, 1307, 1925, 2187, 3017, 3401
Bse1I ACTGG 8 cut(s) 1087, 1367, 3082, 3352, 3497, 3558, 4022, 4055
Bse21I CCTNAGG 1 cut(s) 2823
Bse3DI GCAATG 4 cut(s) 735, 1696, 2022, 2157
Bse8I GATNNNNATC 2 cut(s) 2282, 2421
BseAI TCCGGA 1 cut(s) 590
BseBI CCWGG 4 cut(s) 555, 1613, 2589, 2919
BseDI CCNNGG 5 cut(s) 503, 2105, 2337, 2679, 2925
BseGI GGATG 9 cut(s) 567, 1075, 1153, 1535, 1810, 2196, 2650, 3010, 3282
BseJI GATNNNNATC 2 cut(s) 2282, 2421
BseLI CCNNNNNNNGG 6 cut(s) 590, 1307, 1925, 2187, 3017, 3401
BseMI GCAATG 4 cut(s) 735, 1696, 2022, 2157
BseMII CTCAG 9 cut(s) 855, 1416, 1935, 2885, 2931, 3400, 3420, 3770, 4248
BseNI ACTGG 8 cut(s) 1087, 1367, 3082, 3352, 3497, 3558, 4022, 4055
BseRI GAGGAG 3 cut(s) 2760, 3174, 3949
BseX3I CGGCCG 1 cut(s) 71
BsgI GTGCAG 2 cut(s) 1164, 1449
Bsh1236I CGCG 5 cut(s) 68, 70, 1303, 1771, 2288
Bsh1285I CGRYCG 4 cut(s) 74, 129, 182, 3540
BshFI GGCC 3 cut(s) 73, 1048, 3131
BshNI GGYRCC 1 cut(s) 2921
BsiEI CGRYCG 4 cut(s) 74, 129, 182, 3540
BsiHKAI GWGCWC 2 cut(s) 3625, 4225
BsiHKCI CYCGRG 2 cut(s) 1251, 2367
BsiSI CCGG 4 cut(s) 584, 591, 1778, 3993
BslFI GGGAC 5 cut(s) 169, 1641, 1923, 2027, 3584
BslI CCNNNNNNNGG 6 cut(s) 590, 1307, 1925, 2187, 3017, 3401
BsmBI CGTCTC 2 cut(s) 1298, 1778
BsmFI GGGAC 5 cut(s) 169, 1641, 1923, 2027, 3584
BsmI GAATGC 1 cut(s) 1418
BsnI GGCC 3 cut(s) 73, 1048, 3131
Bso31I GGTCTC 1 cut(s) 3929
BsoBI CYCGRG 2 cut(s) 1251, 2367
Bsp119I TTCGAA 3 cut(s) 14, 33, 1376
Bsp1286I GDGCHC 2 cut(s) 3625, 4225
Bsp13I TCCGGA 1 cut(s) 590
BspANI GGCC 3 cut(s) 73, 1048, 3131
BspCNI CTCAG 9 cut(s) 856, 1415, 1934, 2886, 2932, 3399, 3419, 3769, 4247
BspEI TCCGGA 1 cut(s) 590
BspFNI CGCG 5 cut(s) 68, 70, 1303, 1771, 2288
BspHI TCATGA 2 cut(s) 1761, 2868
BspLI GGNNCC 5 cut(s) 366, 589, 1491, 2923, 3580
BspMAI CTGCAG 1 cut(s) 2047
BspMI ACCTGC 3 cut(s) 797, 3193, 3304
BspOI GCTAGC 1 cut(s) 2811
BspT104I TTCGAA 3 cut(s) 14, 33, 1376
BspT107I GGYRCC 1 cut(s) 2921
BspTI CTTAAG 1 cut(s) 478
BspTNI GGTCTC 1 cut(s) 3929
BsrDI GCAATG 4 cut(s) 735, 1696, 2022, 2157
BsrI ACTGG 8 cut(s) 1087, 1367, 3082, 3352, 3497, 3558, 4022, 4055
BssECI CCNNGG 5 cut(s) 503, 2105, 2337, 2679, 2925
BssNAI GTATAC 2 cut(s) 851, 1897
BssNI GRCGYC 1 cut(s) 2195
BssSI CACGAG 2 cut(s) 456, 3515
BssT1I CCWWGG 3 cut(s) 503, 2105, 2337
Bst1107I GTATAC 2 cut(s) 851, 1897
Bst2BI CACGAG 2 cut(s) 456, 3515
Bst2UI CCWGG 4 cut(s) 555, 1613, 2589, 2919
Bst6I CTCTTC 5 cut(s) 49, 1961, 2781, 3300, 4232
BstACI GRCGYC 1 cut(s) 2195
BstAFI CTTAAG 1 cut(s) 478
BstBAI YACGTR 1 cut(s) 2246
BstBI TTCGAA 3 cut(s) 14, 33, 1376
BstC8I GCNNGC 8 cut(s) 793, 1179, 1443, 1461, 1837, 1841, 1927, 2809
BstDSI CCRYGG 1 cut(s) 2925
BstEII GGTNACC 2 cut(s) 1333, 2702
BstF5I GGATG 9 cut(s) 567, 1075, 1153, 1535, 1810, 2196, 2650, 3010, 3282
BstFNI CGCG 5 cut(s) 68, 70, 1303, 1771, 2288
BstHHI GCGC 2 cut(s) 70, 791
BstMCI CGRYCG 4 cut(s) 74, 129, 182, 3540
BstMWI GCNNNNNNNGC 6 cut(s) 181, 483, 1922, 2006, 2411, 3035
BstNI CCWGG 4 cut(s) 555, 1613, 2589, 2919
BstNSI RCATGY 4 cut(s) 1445, 1611, 1948, 2512
BstPI GGTNACC 2 cut(s) 1333, 2702
BstSCI CCNGG 6 cut(s) 553, 583, 1611, 1776, 2587, 2917
BstSFI CTRYAG 2 cut(s) 2043, 3706
BstSNI TACGTA 1 cut(s) 2246
BstUI CGCG 5 cut(s) 68, 70, 1303, 1771, 2288
BstV2I GAAGAC 2 cut(s) 2810, 3520
BstX2I RGATCY 6 cut(s) 109, 820, 1369, 1489, 2039, 2733
BstXI CCANNNNNNTGG 3 cut(s) 3273, 4029, 4062
BstYI RGATCY 6 cut(s) 109, 820, 1369, 1489, 2039, 2733
BstZ17I GTATAC 2 cut(s) 851, 1897
BstZI CGGCCG 1 cut(s) 71
Bsu36I CCTNAGG 1 cut(s) 2823
BsuRI GGCC 3 cut(s) 73, 1048, 3131
BtgI CCRYGG 1 cut(s) 2925
BtrI CACGTC 1 cut(s) 4102
BtsCI GGATG 9 cut(s) 567, 1075, 1153, 1535, 1810, 2196, 2650, 3010, 3282
BtsIMutI CAGTG 9 cut(s) 96, 747, 1650, 1902, 3066, 3093, 3394, 4029, 4062
BveI ACCTGC 3 cut(s) 797, 3193, 3304
Cac8I GCNNGC 8 cut(s) 793, 1179, 1443, 1461, 1837, 1841, 1927, 2809
CaiI CAGNNNCTG 1 cut(s) 3208
CciI TCATGA 2 cut(s) 1761, 2868
CfoI GCGC 2 cut(s) 70, 791
Cfr13I GGNCC 3 cut(s) 578, 1046, 1247
CseI GACGC 3 cut(s) 164, 1760, 2203
CsiI ACCWGGT 1 cut(s) 2917
Csp6I GTAC 9 cut(s) 423, 941, 1556, 2537, 2922, 3192, 3239, 3671, 3857
CviQI GTAC 9 cut(s) 423, 941, 1556, 2537, 2922, 3192, 3239, 3671, 3857
DraI TTTAAA 1 cut(s) 642
DraIII CACNNNGTG 1 cut(s) 2187
EaeI YGGCCR 1 cut(s) 71
EagI CGGCCG 1 cut(s) 71
Eam1104I CTCTTC 5 cut(s) 49, 1961, 2781, 3300, 4232
EarI CTCTTC 5 cut(s) 49, 1961, 2781, 3300, 4232
Ecl136II GAGCTC 1 cut(s) 3623
EclXI CGGCCG 1 cut(s) 71
Eco105I TACGTA 1 cut(s) 2246
Eco130I CCWWGG 3 cut(s) 503, 2105, 2337
Eco147I AGGCCT 1 cut(s) 3131
Eco24I GRGCYC 1 cut(s) 3625
Eco31I GGTCTC 1 cut(s) 3929
Eco32I GATATC 1 cut(s) 1767
Eco47I GGWCC 2 cut(s) 578, 1247
Eco52I CGGCCG 1 cut(s) 71
Eco53kI GAGCTC 1 cut(s) 3623
Eco57I CTGAAG 3 cut(s) 690, 1157, 1479
Eco81I CCTNAGG 1 cut(s) 2823
Eco88I CYCGRG 2 cut(s) 1251, 2367
Eco91I GGTNACC 2 cut(s) 1333, 2702
EcoICRI GAGCTC 1 cut(s) 3623
EcoO109I RGGNCCY 1 cut(s) 1247
EcoO65I GGTNACC 2 cut(s) 1333, 2702
EcoRI GAATTC 2 cut(s) 35, 2171
EcoRII CCWGG 4 cut(s) 553, 1611, 2587, 2917
EcoRV GATATC 1 cut(s) 1767
EcoT14I CCWWGG 3 cut(s) 503, 2105, 2337
EcoT38I GRGCYC 1 cut(s) 3625
ErhI CCWWGG 3 cut(s) 503, 2105, 2337
Esp3I CGTCTC 2 cut(s) 1298, 1778
FalI AAGNNNNNCTT 4 cut(s) 327, 359, 550, 582
FaqI GGGAC 5 cut(s) 169, 1641, 1923, 2027, 3584
FauI CCCGC 2 cut(s) 2617, 2647
FauNDI CATATG 2 cut(s) 3745, 4049
FbaI TGATCA 4 cut(s) 301, 1572, 3606, 4113
FblI GTMKAC 3 cut(s) 850, 1896, 3489
FokI GGATG 9 cut(s) 574, 1082, 1160, 1542, 1797, 2203, 2657, 3017, 3289
FriOI GRGCYC 1 cut(s) 3625
FspBI CTAG 9 cut(s) 297, 504, 1283, 1659, 1721, 2006, 2730, 2808, 3111
GlaI GCGC 2 cut(s) 69, 790
GsuI CTGGAG 3 cut(s) 1903, 2610, 3514
HaeIII GGCC 3 cut(s) 73, 1048, 3131
HapII CCGG 4 cut(s) 584, 591, 1778, 3993
HgaI GACGC 3 cut(s) 164, 1760, 2203
HhaI GCGC 2 cut(s) 70, 791
Hin1I GRCGYC 1 cut(s) 2195
Hin6I GCGC 2 cut(s) 68, 789
HinP1I GCGC 2 cut(s) 68, 789
HincII GTYRAC 2 cut(s) 2494, 2506
HindII GTYRAC 2 cut(s) 2494, 2506
HindIII AAGCTT 4 cut(s) 317, 515, 626, 3418
HpaII CCGG 4 cut(s) 584, 591, 1778, 3993
Hpy99I CGWCG 3 cut(s) 145, 180, 604
HpyF10VI GCNNNNNNNGC 6 cut(s) 181, 483, 1922, 2006, 2411, 3035
Hsp92I GRCGYC 1 cut(s) 2195
HspAI GCGC 2 cut(s) 68, 789
Kpn2I TCCGGA 1 cut(s) 590
KpnI GGTACC 1 cut(s) 2925
Ksp22I TGATCA 4 cut(s) 301, 1572, 3606, 4113
LmnI GCTCC 4 cut(s) 94, 1921, 3620, 3739
LweI GCATC 6 cut(s) 862, 1138, 1975, 2407, 3016, 3267
MabI ACCWGGT 1 cut(s) 2917
MaeI CTAG 9 cut(s) 297, 504, 1283, 1659, 1721, 2006, 2730, 2808, 3111
MfeI CAATTG 3 cut(s) 2220, 2961, 3042
MflI RGATCY 6 cut(s) 109, 820, 1369, 1489, 2039, 2733
MhlI GDGCHC 2 cut(s) 3625, 4225
MlyI GAGTC 4 cut(s) 151, 1286, 2220, 2798
MmeI TCCRAC 3 cut(s) 1597, 2279, 2590
MroI TCCGGA 1 cut(s) 590
MslI CAYNNNNRTG 1 cut(s) 3614
MspA1I CMGCKG 3 cut(s) 1839, 3722, 3950
MspCI CTTAAG 1 cut(s) 478
MspI CCGG 4 cut(s) 584, 591, 1778, 3993
MspR9I CCNGG 6 cut(s) 555, 585, 1613, 1778, 2589, 2919
MunI CAATTG 3 cut(s) 2220, 2961, 3042
Mva1269I GAATGC 1 cut(s) 1418
MvaI CCWGG 4 cut(s) 555, 1613, 2589, 2919
MvnI CGCG 5 cut(s) 68, 70, 1303, 1771, 2288
MwoI GCNNNNNNNGC 6 cut(s) 181, 483, 1922, 2006, 2411, 3035
NciI CCSGG 2 cut(s) 585, 1778
NdeI CATATG 2 cut(s) 3745, 4049
NheI GCTAGC 1 cut(s) 2807
NlaIV GGNNCC 5 cut(s) 366, 589, 1491, 2923, 3580
NmeAIII GCCGAG 2 cut(s) 109, 3611
NmuCI GTSAC 5 cut(s) 1333, 1633, 2702, 2776, 4097
NspI RCATGY 4 cut(s) 1445, 1611, 1948, 2512
NspV TTCGAA 3 cut(s) 14, 33, 1376
PaeI GCATGC 1 cut(s) 1445
PaeR7I CTCGAG 2 cut(s) 1251, 2367
PagI TCATGA 2 cut(s) 1761, 2868
PaqCI CACCTGC 1 cut(s) 3304
PceI AGGCCT 1 cut(s) 3131
PciI ACATGT 1 cut(s) 1944
PcsI WCGNNNNNNNCGW 4 cut(s) 262, 346, 3542, 3687
PctI GAATGC 1 cut(s) 1418
PflFI GACNNNGTC 1 cut(s) 2018
PflMI CCANNNNNTGG 2 cut(s) 2187, 3017
Ple19I CGATCG 2 cut(s) 129, 3540
PleI GAGTC 4 cut(s) 151, 1285, 2220, 2797
PpsI GAGTC 4 cut(s) 151, 1285, 2220, 2797
Ppu21I YACGTR 1 cut(s) 2246
PpuMI RGGWCCY 1 cut(s) 1247
PscI ACATGT 1 cut(s) 1944
Psp124BI GAGCTC 1 cut(s) 3625
Psp1406I AACGTT 3 cut(s) 1058, 2723, 3842
Psp5II RGGWCCY 1 cut(s) 1247
Psp6I CCWGG 4 cut(s) 553, 1611, 2587, 2917
PspEI GGTNACC 2 cut(s) 1333, 2702
PspGI CCWGG 4 cut(s) 553, 1611, 2587, 2917
PspN4I GGNNCC 5 cut(s) 366, 589, 1491, 2923, 3580
PspPI GGNCC 3 cut(s) 578, 1046, 1247
PspPPI RGGWCCY 1 cut(s) 1247
PspXI VCTCGAGB 1 cut(s) 2367
PsrI GAACNNNNNNTAC 4 cut(s) 3473, 3505, 3854, 3886
PstI CTGCAG 1 cut(s) 2047
PstNI CAGNNNCTG 1 cut(s) 3208
PsuI RGATCY 6 cut(s) 109, 820, 1369, 1489, 2039, 2733
PsyI GACNNNGTC 1 cut(s) 2018
PvuI CGATCG 2 cut(s) 129, 3540
PvuII CAGCTG 1 cut(s) 1839
RsaI GTAC 9 cut(s) 424, 942, 1557, 2538, 2923, 3193, 3240, 3672, 3858
RsaNI GTAC 9 cut(s) 423, 941, 1556, 2537, 2922, 3192, 3239, 3671, 3857
RseI CAYNNNNRTG 1 cut(s) 3614
SacI GAGCTC 1 cut(s) 3625
Sau96I GGNCC 3 cut(s) 578, 1046, 1247
ScaI AGTACT 1 cut(s) 942
SchI GAGTC 4 cut(s) 151, 1286, 2220, 2798
ScrFI CCNGG 6 cut(s) 555, 585, 1613, 1778, 2589, 2919
SduI GDGCHC 2 cut(s) 3625, 4225
SexAI ACCWGGT 1 cut(s) 2917
SfaNI GCATC 6 cut(s) 862, 1138, 1975, 2407, 3016, 3267
SfcI CTRYAG 2 cut(s) 2043, 3706
Sfr274I CTCGAG 2 cut(s) 1251, 2367
SfuI TTCGAA 3 cut(s) 14, 33, 1376
SinI GGWCC 2 cut(s) 578, 1247
SlaI CTCGAG 2 cut(s) 1251, 2367
SmiMI CAYNNNNRTG 1 cut(s) 3614
SmlI CTYRAG 7 cut(s) 478, 487, 1251, 2367, 2529, 2772, 3250
SmoI CTYRAG 7 cut(s) 478, 487, 1251, 2367, 2529, 2772, 3250
SnaBI TACGTA 1 cut(s) 2246
SpeI ACTAGT 1 cut(s) 296
SphI GCATGC 1 cut(s) 1445
SseBI AGGCCT 1 cut(s) 3131
SspI AATATT 3 cut(s) 400, 523, 4160
SspMI CTAG 9 cut(s) 297, 504, 1283, 1659, 1721, 2006, 2730, 2808, 3111
SstI GAGCTC 1 cut(s) 3625
StuI AGGCCT 1 cut(s) 3131
StyD4I CCNGG 6 cut(s) 553, 583, 1611, 1776, 2587, 2917
StyI CCWWGG 3 cut(s) 503, 2105, 2337
TaqII GACCGA 1 cut(s) 168
TatI WGTACW 3 cut(s) 940, 3670, 3856
TauI GCSGC 7 cut(s) 8, 11, 73, 125, 1415, 3722, 3950
TscAI CASTG 9 cut(s) 96, 754, 1650, 1909, 3073, 3093, 3394, 4029, 4062
TseFI GTSAC 5 cut(s) 1333, 1633, 2702, 2776, 4097
Tsp45I GTSAC 5 cut(s) 1333, 1633, 2702, 2776, 4097
TspGWI ACGGA 3 cut(s) 1280, 1412, 3249
TspRI CASTG 9 cut(s) 96, 754, 1650, 1909, 3073, 3093, 3394, 4029, 4062
Tth111I GACNNNGTC 1 cut(s) 2018
Van91I CCANNNNNTGG 2 cut(s) 2187, 3017
Vha464I CTTAAG 1 cut(s) 478
VpaK11BI GGWCC 2 cut(s) 578, 1247
XapI RAATTY 6 cut(s) 35, 391, 1514, 1586, 2171, 2852
XceI RCATGY 4 cut(s) 1445, 1611, 1948, 2512
XhoI CTCGAG 2 cut(s) 1251, 2367
XmaJI CCTAGG 1 cut(s) 503
XmiI GTMKAC 3 cut(s) 850, 1896, 3489
XspI CTAG 9 cut(s) 297, 504, 1283, 1659, 1721, 2006, 2730, 2808, 3111
ZrmI AGTACT 1 cut(s) 942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.