Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001630.1

Orthogroup ID

OG0007618

Physical Location & Seq

Genomic Coordinates Forward (+)

162798 .. 166678

Gene Structure 3881 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001630.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

atgccatacttgttgcaggttgcatttgttggatttgtgacatgcacaacgtttcctagatggcaattacaccccacagatgaaataaatggcaacctttatctttcttgcttgttctttgggttagtgcacatgatgttcaatgggcattccgagctacctcttatgatatctcaactcccagtcttttacaagcaaagggataattactttcatcctgcgtgggcatggtctagtgttaatttgcttttgcgcataccttactctattattgaagctgttgtatggtcttgtgtagtatactacacagttggttttgcccctggtgctgggaaatttttctgtttcatgtttttgctattttctatgcaccaaatggctttgggtctcttccggatagtggcatctcttgcaagagatatggtcattgccaatacatttggatcagctgcattacttgttatatttttgttgggtggattcgttattcccaaagatagcattaagccatggtggaaatgggccttttgggtatcaccactatcatatggaaaacgcgctctttctgtcaatgaatttacttctgtaaggtggatcaagatagctcctttaacaaacagaacaattgggcaaaatgtcctccaagaacacaacataccaaatggtgattactggtattggattggagttggtggtttgttagcttatgcattgcttttcaattgcgcagtgactctggccttgacgtacctaaatcgtaagtttgaaagaaatttgtataatgttgttcatcacatgttcttcacagcactaaggaagtaccagacagtgcttccacttgatgacacagaagggagtcctgctgcagatgctttagttgggtctagtggagctggaaagaccactttgatggacgtccttgctggtaggaaaactggtggatatatagaaggagatattaagatatctggttacccgagagagcaacgtacttttgctagagtagcaggatatgttgagcaaaatgacatacattctcctcaagttacagttgaggagagtctatggttttcttctgctcttcgccttccaaaggaagtcagcacagagacaagactcgtgtttgtcgaagaagtaatggaactagtagagcttgatactctaaggcatgctttggttggtgtgccaggcagttcaggcttatcaacagagcaaagaaaacgcttaacaatcgctgttgagcttgttgcgaacccttcaattatctttatggatgaacccacatctggactggacgcaagggcagcagccattgtgacgaggactgttcgtaatactgttgatacaggaagaacggtggtctgcactatacaccaaccaagtatcgacatttttgaggcatttgacgaggagattaatggaatcactccgattccaagcgggtacaatccagcaacctggatgctggaggtaaccacaccgtcttttgaacagagaattggagaagacttcgctacaatatacaggaattcagagcagtacagggaagtggaagagtccatcaagcagttgagtactcctccaaccgactcaaaaccattaaagtttgcttccacatattcacagaacacattggctcaatttacgaactgcttatggaaacagaatctcgtgtattggagaagtccacaatataatgcgatgaggttaatctttactatccttgctgcattgatactgggctcggcattttgggatgtcggtacaaaaagggactcgcttcaatcattgatgatggttatgggagctctttattctgcttgtttgtttcttggggtcaataacgcttcttcagttcagccgattgtttcgattgagaggacggtattttatcgagagaaagcagctggaatgtattctcctttggcttatgcagcggcccagggccttatagagatcccatacattgctgtgcagacaatagtatacggggtgattacatacttcatgatcaattttgaaaggacaatcacaaaattcttgctctatattctgatcatgttcctcactttcgtatatttcactcttttcggcatggcggctgttgctgtcacagcttctcaacccctggcagctgccatctctgctgcattttactcattgtggaatctattctctggtttcctcgtccccaaaccatttgtccaacacttacaacctttgttcattgaccaactaactcttgcttcgcgtgctttcttgacattcacggcgtgcaagcatcccataaatcaaattggattatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006855 GO:0008150 GO:0009506 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

768

Amino Acids

86.28

Weight (kDa)

7.19

Isoelectric Point (pI)

40.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007618)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29940
fragaria_vesca	FvH4_3g38510
malus_domestica	MD03G1071100.v1.1 MD11G1075100.v1.1
prunus_persica	Prupe.6G057900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0441011 RchiOBHm_Chr5g0069411
rosa_laevigata	RLG00000006130
rosa_multiflora	Rmu_sc0001630.1_g000022 Rmu_sc0002658.1_g000022
rosa_roxburghii	Rroxscaffold_1G00011550 Rroxscaffold_5G00381890
rosa_rugosa	Rorug04G0330000 Rorug04G0330000 Rorug04G0330100 Rorug05G0397400
rosa_samantha	Rh4AG381900 Rh4DG388300 Rh5AG454600 Rh5BG473400 Rh5CG495900 Rh5DG485400
rosa_wichuraiana	Rw4G032920 Rw5G042400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	918
Acc16I	TGCGCA	2 cut(s)	254, 727
Acc36I	ACCTGC	1 cut(s)	7
AccI	GTMKAC	2 cut(s)	300, 1986
AccII	CGCG	2 cut(s)	558, 2251
AccIII	TCCGGA	1 cut(s)	393
AciI	CCGC	3 cut(s)	1440, 1937, 2099
AclI	AACGTT	1 cut(s)	50
AclWI	GGATC	3 cut(s)	451, 602, 1951
AcsI	RAATTY	5 cut(s)	335, 575, 772, 1528, 2036
AcuI	CTGAAG	1 cut(s)	1836
AcyI	GRCGYC	1 cut(s)	915
AdeI	CACNNNGTG	1 cut(s)	2274
AfaI	GTAC	7 cut(s)	749, 821, 991, 1445, 1541, 1576, 1765
AfiI	CCNNNNNNNGG	4 cut(s)	329, 400, 1093, 1286
AflIII	ACRYGT	1 cut(s)	795
AgsI	TTSAA	8 cut(s)	142, 275, 721, 767, 1260, 1490, 1784, 2021
AhlI	ACTAGT	1 cut(s)	1144
AjnI	CCWGG	5 cut(s)	322, 1186, 1457, 1941, 2127
AjuI	GAANNNNNNNTTGG	2 cut(s)	1482, 1514
Alw21I	GWGCWC	2 cut(s)	132, 1810
Alw26I	GTCTC	2 cut(s)	392, 1103
Alw44I	GTGCAC	1 cut(s)	128
AlwI	GGATC	3 cut(s)	451, 602, 1951
Ama87I	CYCGRG	1 cut(s)	976
Aor13HI	TCCGGA	1 cut(s)	393
AoxI	GGCC	4 cut(s)	522, 738, 1938, 1945
ApaLI	GTGCAC	1 cut(s)	128
ApoI	RAATTY	5 cut(s)	335, 575, 772, 1528, 2036
ArsI	GACNNNNNNTTYG	2 cut(s)	2187, 2219
AseI	ATTAAT	1 cut(s)	1416
Asp700I	GAANNNNTTC	3 cut(s)	338, 1915, 2171
AspLEI	GCGC	3 cut(s)	255, 560, 728
AspS9I	GGNCC	3 cut(s)	522, 1939, 1945
AsuHPI	GGTGA	3 cut(s)	528, 677, 2005
AvaI	CYCGRG	1 cut(s)	976
BaeGI	GKGCMC	1 cut(s)	132
BanII	GRGCYC	2 cut(s)	1745, 1810
BauI	CACGAG	2 cut(s)	1118, 1670
BbsI	GAAGAC	1 cut(s)	1512
Bbv12I	GWGCWC	2 cut(s)	132, 1810
BccI	CCATC	5 cut(s)	54, 904, 1568, 1789, 2147
BceAI	ACGGC	1 cut(s)	2286
BciT130I	CCWGG	5 cut(s)	324, 1188, 1459, 1943, 2129
BclI	TGATCA	2 cut(s)	2010, 2055
BcoDI	GTCTC	2 cut(s)	392, 1103
BcuI	ACTAGT	1 cut(s)	1144
BfaI	CTAG	5 cut(s)	57, 234, 885, 999, 1145
BfmI	CTRYAG	1 cut(s)	864
BfuAI	ACCTGC	1 cut(s)	7
BmcAI	AGTACT	1 cut(s)	1576
Bme1390I	CCNGG	5 cut(s)	324, 1188, 1459, 1943, 2129
BmeT110I	CYCGRG	1 cut(s)	976
BmgT120I	GGNCC	3 cut(s)	522, 1939, 1945
BmrFI	CCNGG	5 cut(s)	324, 1188, 1459, 1943, 2129
BmrI	ACTGGG	2 cut(s)	176, 1748
BmsI	GCATC	4 cut(s)	413, 859, 1452, 2290
BmuI	ACTGGG	2 cut(s)	176, 1748
BpiI	GAAGAC	1 cut(s)	1512
BplI	GAGNNNNNCTC	2 cut(s)	1564, 1596
BpmI	CTGGAG	1 cut(s)	1487
BpuEI	CTTGAG	1 cut(s)	1026
BsaHI	GRCGYC	1 cut(s)	915
BsaI	GGTCTC	1 cut(s)	392
BsaJI	CCNNGG	5 cut(s)	322, 509, 1941, 1942, 2127
BsaWI	WCCGGW	1 cut(s)	393
Bsc4I	CCNNNNNNNGG	4 cut(s)	329, 400, 1093, 1286
Bse1I	ACTGG	5 cut(s)	182, 677, 940, 1296, 1743
Bse3DI	GCAATG	3 cut(s)	426, 710, 1965
BseAI	TCCGGA	1 cut(s)	393
BseBI	CCWGG	5 cut(s)	324, 1188, 1459, 1943, 2129
BseDI	CCNNGG	5 cut(s)	322, 509, 1941, 1942, 2127
BseGI	GGATG	5 cut(s)	214, 1279, 1467, 1762, 2281
BseLI	CCNNNNNNNGG	4 cut(s)	329, 400, 1093, 1286
BseMI	GCAATG	3 cut(s)	426, 710, 1965
BseNI	ACTGG	5 cut(s)	182, 677, 940, 1296, 1743
BseRI	GAGGAG	4 cut(s)	1029, 1070, 1424, 1569
BseSI	GKGCMC	1 cut(s)	132
BseYI	CCCAGC	1 cut(s)	329
BsgI	GTGCAG	2 cut(s)	1348, 1994
Bsh1236I	CGCG	2 cut(s)	558, 2251
BshFI	GGCC	4 cut(s)	524, 740, 1940, 1947
BsiHKAI	GWGCWC	2 cut(s)	132, 1810
BsiHKCI	CYCGRG	1 cut(s)	976
BsiSI	CCGG	1 cut(s)	394
BslFI	GGGAC	2 cut(s)	1787, 2174
BslI	CCNNNNNNNGG	4 cut(s)	329, 400, 1093, 1286
BsmAI	GTCTC	2 cut(s)	392, 1103
BsmFI	GGGAC	2 cut(s)	1787, 2174
BsmI	GAATGC	1 cut(s)	148
BsnI	GGCC	4 cut(s)	524, 740, 1940, 1947
Bso31I	GGTCTC	1 cut(s)	392
BsoBI	CYCGRG	1 cut(s)	976
Bsp1286I	GDGCHC	3 cut(s)	132, 1745, 1810
Bsp13I	TCCGGA	1 cut(s)	393
Bsp143I	GATC	5 cut(s)	443, 594, 1956, 2010, 2055
Bsp19I	CCATGG	1 cut(s)	509
BspACI	CCGC	3 cut(s)	1440, 1937, 2099
BspANI	GGCC	4 cut(s)	524, 740, 1940, 1947
BspEI	TCCGGA	1 cut(s)	393
BspFNI	CGCG	2 cut(s)	558, 2251
BspHI	TCATGA	1 cut(s)	2007
BspMAI	CTGCAG	1 cut(s)	868
BspMI	ACCTGC	1 cut(s)	7
BspPI	GGATC	3 cut(s)	451, 602, 1951
BspQI	GCTCTTC	1 cut(s)	1086
BspTNI	GGTCTC	1 cut(s)	392
BsrDI	GCAATG	3 cut(s)	426, 710, 1965
BsrI	ACTGG	5 cut(s)	182, 677, 940, 1296, 1743
BssECI	CCNNGG	5 cut(s)	322, 509, 1941, 1942, 2127
BssMI	GATC	5 cut(s)	443, 594, 1956, 2010, 2055
BssNAI	GTATAC	2 cut(s)	301, 1987
BssNI	GRCGYC	1 cut(s)	915
BssSI	CACGAG	2 cut(s)	1118, 1670
BssT1I	CCWWGG	1 cut(s)	509
Bst1107I	GTATAC	2 cut(s)	301, 1987
Bst2BI	CACGAG	2 cut(s)	1118, 1670
Bst2UI	CCWGG	5 cut(s)	324, 1188, 1459, 1943, 2129
Bst4CI	ACNGT	8 cut(s)	310, 829, 1051, 1327, 1339, 1357, 1482, 1885
Bst6I	CTCTTC	3 cut(s)	395, 1086, 1548
BstACI	GRCGYC	1 cut(s)	915
BstAPI	GCANNNNNTGC	1 cut(s)	410
BstC8I	GCNNGC	4 cut(s)	1170, 2253, 2275, 2279
BstDEI	CTNAG	2 cut(s)	812, 1163
BstDSI	CCRYGG	1 cut(s)	509
BstEII	GGTNACC	2 cut(s)	971, 1471
BstENI	CCTNNNNNAGG	1 cut(s)	1091
BstF5I	GGATG	5 cut(s)	214, 1279, 1467, 1762, 2281
BstFNI	CGCG	2 cut(s)	558, 2251
BstHHI	GCGC	3 cut(s)	255, 560, 728
BstKTI	GATC	5 cut(s)	446, 597, 1959, 2013, 2058
BstMAI	GTCTC	2 cut(s)	392, 1103
BstMBI	GATC	5 cut(s)	443, 594, 1956, 2010, 2055
BstNI	CCWGG	5 cut(s)	324, 1188, 1459, 1943, 2129
BstNSI	RCATGY	3 cut(s)	45, 799, 1172
BstPI	GGTNACC	2 cut(s)	971, 1471
BstSCI	CCNGG	5 cut(s)	322, 1186, 1457, 1941, 2127
BstSFI	CTRYAG	1 cut(s)	864
BstSLI	GKGCMC	1 cut(s)	132
BstUI	CGCG	2 cut(s)	558, 2251
BstV2I	GAAGAC	1 cut(s)	1512
BstX2I	RGATCY	1 cut(s)	1956
BstXI	CCANNNNNNTGG	2 cut(s)	910, 1458
BstYI	RGATCY	1 cut(s)	1956
BstZ17I	GTATAC	2 cut(s)	301, 1987
BsuRI	GGCC	4 cut(s)	524, 740, 1940, 1947
BtgI	CCRYGG	1 cut(s)	509
BtgZI	GCGATG	1 cut(s)	1715
BtsCI	GGATG	5 cut(s)	214, 1279, 1467, 1762, 2281
BtsI	GCAGTG	1 cut(s)	735
BtsIMutI	CAGTG	2 cut(s)	735, 834
BveI	ACCTGC	1 cut(s)	7
Cac8I	GCNNGC	4 cut(s)	1170, 2253, 2275, 2279
CciI	TCATGA	1 cut(s)	2007
CfoI	GCGC	3 cut(s)	255, 560, 728
Cfr13I	GGNCC	3 cut(s)	522, 1939, 1945
CseI	GACGC	1 cut(s)	1304
Csp6I	GTAC	7 cut(s)	748, 820, 990, 1444, 1540, 1575, 1764
CviQI	GTAC	7 cut(s)	748, 820, 990, 1444, 1540, 1575, 1764
DdeI	CTNAG	2 cut(s)	812, 1163
DpnI	GATC	5 cut(s)	445, 596, 1958, 2012, 2057
DpnII	GATC	5 cut(s)	443, 594, 1956, 2010, 2055
DraIII	CACNNNGTG	1 cut(s)	2274
Eam1104I	CTCTTC	3 cut(s)	395, 1086, 1548
EarI	CTCTTC	3 cut(s)	395, 1086, 1548
Ecl136II	GAGCTC	1 cut(s)	1808
Eco130I	CCWWGG	1 cut(s)	509
Eco24I	GRGCYC	2 cut(s)	1745, 1810
Eco31I	GGTCTC	1 cut(s)	392
Eco32I	GATATC	2 cut(s)	171, 966
Eco53kI	GAGCTC	1 cut(s)	1808
Eco57I	CTGAAG	1 cut(s)	1836
Eco88I	CYCGRG	1 cut(s)	976
Eco91I	GGTNACC	2 cut(s)	971, 1471
EcoICRI	GAGCTC	1 cut(s)	1808
EcoNI	CCTNNNNNAGG	1 cut(s)	1091
EcoO109I	RGGNCCY	1 cut(s)	1945
EcoO65I	GGTNACC	2 cut(s)	971, 1471
EcoRI	GAATTC	1 cut(s)	1528
EcoRII	CCWGG	5 cut(s)	322, 1186, 1457, 1941, 2127
EcoRV	GATATC	2 cut(s)	171, 966
EcoT14I	CCWWGG	1 cut(s)	509
EcoT22I	ATGCAT	1 cut(s)	712
EcoT38I	GRGCYC	2 cut(s)	1745, 1810
ErhI	CCWWGG	1 cut(s)	509
FalI	AAGNNNNNCTT	2 cut(s)	1156, 1188
FaqI	GGGAC	2 cut(s)	1787, 2174
FauI	CCCGC	1 cut(s)	1433
FauNDI	CATATG	1 cut(s)	547
FbaI	TGATCA	2 cut(s)	2010, 2055
FblI	GTMKAC	2 cut(s)	300, 1986
FokI	GGATG	5 cut(s)	201, 1286, 1474, 1769, 2268
FriOI	GRGCYC	2 cut(s)	1745, 1810
FspBI	CTAG	5 cut(s)	57, 234, 885, 999, 1145
FspI	TGCGCA	2 cut(s)	254, 727
GlaI	GCGC	3 cut(s)	254, 559, 727
GsaI	CCCAGC	1 cut(s)	333
GsuI	CTGGAG	1 cut(s)	1487
HaeIII	GGCC	4 cut(s)	524, 740, 1940, 1947
HapII	CCGG	1 cut(s)	394
HgaI	GACGC	1 cut(s)	1304
HhaI	GCGC	3 cut(s)	255, 560, 728
Hin1I	GRCGYC	1 cut(s)	915
Hin6I	GCGC	3 cut(s)	253, 558, 726
HinP1I	GCGC	3 cut(s)	253, 558, 726
HpaII	CCGG	1 cut(s)	394
HphI	GGTGA	3 cut(s)	528, 677, 2005
Hpy166II	GTNNAC	4 cut(s)	130, 301, 1688, 1987
Hpy188I	TCNGA	4 cut(s)	154, 1431, 1534, 2055
Hpy188III	TCNNGA	6 cut(s)	394, 598, 1287, 1895, 2008, 2260
Hpy8I	GTNNAC	4 cut(s)	130, 301, 1688, 1987
HpyAV	CCTTC	4 cut(s)	845, 944, 1097, 1266
HpyCH4III	ACNGT	8 cut(s)	310, 829, 1051, 1327, 1339, 1357, 1482, 1885
HpyCH4IV	ACGT	4 cut(s)	50, 746, 915, 988
HpyF3I	CTNAG	2 cut(s)	812, 1163
HpySE526I	ACGT	4 cut(s)	50, 746, 915, 988
Hsp92I	GRCGYC	1 cut(s)	915
HspAI	GCGC	3 cut(s)	253, 558, 726
Kpn2I	TCCGGA	1 cut(s)	393
Ksp22I	TGATCA	2 cut(s)	2010, 2055
Kzo9I	GATC	5 cut(s)	443, 594, 1956, 2010, 2055
LguI	GCTCTTC	1 cut(s)	1086
LmnI	GCTCC	3 cut(s)	610, 890, 1805
LweI	GCATC	4 cut(s)	413, 859, 1452, 2290
MaeI	CTAG	5 cut(s)	57, 234, 885, 999, 1145
MaeII	ACGT	4 cut(s)	50, 746, 915, 988
MaeIII	GTNAC	7 cut(s)	37, 730, 971, 1045, 1315, 1471, 2110
MalI	GATC	5 cut(s)	445, 596, 1958, 2012, 2057
MboI	GATC	5 cut(s)	443, 594, 1956, 2010, 2055
MboII	GAAGA	9 cut(s)	382, 793, 1065, 1073, 1142, 1362, 1517, 1565, 1842
MfeI	CAATTG	2 cut(s)	624, 721
MflI	RGATCY	1 cut(s)	1956
MhlI	GDGCHC	3 cut(s)	132, 1745, 1810
MlyI	GAGTC	7 cut(s)	727, 865, 1069, 1110, 1565, 1583, 1769
MmeI	TCCRAC	3 cut(s)	10, 1607, 2230
Mph1103I	ATGCAT	1 cut(s)	712
MroI	TCCGGA	1 cut(s)	393
MroXI	GAANNNNTTC	3 cut(s)	338, 1915, 2171
MseI	TTAA	8 cut(s)	240, 504, 611, 960, 1226, 1416, 1601, 1709
MslI	CAYNNNNRTG	2 cut(s)	908, 1970
MspA1I	CMGCKG	4 cut(s)	449, 1907, 1937, 2135
MspI	CCGG	1 cut(s)	394
MspR9I	CCNGG	5 cut(s)	324, 1188, 1459, 1943, 2129
MunI	CAATTG	2 cut(s)	624, 721
Mva1269I	GAATGC	1 cut(s)	148
MvaI	CCWGG	5 cut(s)	324, 1188, 1459, 1943, 2129
MvnI	CGCG	2 cut(s)	558, 2251
NcoI	CCATGG	1 cut(s)	509
NdeI	CATATG	1 cut(s)	547
NdeII	GATC	5 cut(s)	443, 594, 1956, 2010, 2055
NmeAIII	GCCGAG	1 cut(s)	1724
NmuCI	GTSAC	4 cut(s)	37, 730, 1315, 2110
NsbI	TGCGCA	2 cut(s)	254, 727
NsiI	ATGCAT	1 cut(s)	712
NspI	RCATGY	3 cut(s)	45, 799, 1172
PaeI	GCATGC	1 cut(s)	1172
PagI	TCATGA	1 cut(s)	2007
PasI	CCCWGGG	1 cut(s)	1942
PciI	ACATGT	1 cut(s)	795
PciSI	GCTCTTC	1 cut(s)	1086
PcsI	WCGNNNNNNNCGW	1 cut(s)	1125
PctI	GAATGC	1 cut(s)	148
PdmI	GAANNNNTTC	3 cut(s)	338, 1915, 2171
PfeI	GAWTC	5 cut(s)	480, 1422, 1432, 1666, 2167
PleI	GAGTC	7 cut(s)	727, 864, 1068, 1110, 1564, 1583, 1769
PpsI	GAGTC	7 cut(s)	727, 864, 1068, 1110, 1564, 1583, 1769
PscI	ACATGT	1 cut(s)	795
PshBI	ATTAAT	1 cut(s)	1416
Psp124BI	GAGCTC	1 cut(s)	1810
Psp1406I	AACGTT	1 cut(s)	50
Psp6I	CCWGG	5 cut(s)	322, 1186, 1457, 1941, 2127
PspEI	GGTNACC	2 cut(s)	971, 1471
PspFI	CCCAGC	1 cut(s)	329
PspGI	CCWGG	5 cut(s)	322, 1186, 1457, 1941, 2127
PspPI	GGNCC	3 cut(s)	522, 1939, 1945
PsrI	GAACNNNNNNTAC	2 cut(s)	639, 671
PstI	CTGCAG	1 cut(s)	868
PsuI	RGATCY	1 cut(s)	1956
PvuII	CAGCTG	3 cut(s)	449, 1907, 2135
RsaI	GTAC	7 cut(s)	749, 821, 991, 1445, 1541, 1576, 1765
RsaNI	GTAC	7 cut(s)	748, 820, 990, 1444, 1540, 1575, 1764
RseI	CAYNNNNRTG	2 cut(s)	908, 1970
SacI	GAGCTC	1 cut(s)	1810
SapI	GCTCTTC	1 cut(s)	1086
SaqAI	TTAA	8 cut(s)	240, 504, 611, 960, 1226, 1416, 1601, 1709
Sau3AI	GATC	5 cut(s)	443, 594, 1956, 2010, 2055
Sau96I	GGNCC	3 cut(s)	522, 1939, 1945
ScaI	AGTACT	1 cut(s)	1576
SchI	GAGTC	7 cut(s)	727, 865, 1069, 1110, 1565, 1583, 1769
ScrFI	CCNGG	5 cut(s)	324, 1188, 1459, 1943, 2129
SduI	GDGCHC	3 cut(s)	132, 1745, 1810
SfaNI	GCATC	4 cut(s)	413, 859, 1452, 2290
SfcI	CTRYAG	1 cut(s)	864
SmiMI	CAYNNNNRTG	2 cut(s)	908, 1970
SmlI	CTYRAG	1 cut(s)	1041
SmoI	CTYRAG	1 cut(s)	1041
SpeI	ACTAGT	1 cut(s)	1144
SphI	GCATGC	1 cut(s)	1172
SsiI	CCGC	3 cut(s)	1440, 1937, 2099
SspMI	CTAG	5 cut(s)	57, 234, 885, 999, 1145
SstI	GAGCTC	1 cut(s)	1810
StyD4I	CCNGG	5 cut(s)	322, 1186, 1457, 1941, 2127
StyI	CCWWGG	1 cut(s)	509
TaaI	ACNGT	8 cut(s)	310, 829, 1051, 1327, 1339, 1357, 1482, 1885
TaiI	ACGT	4 cut(s)	53, 749, 918, 991
TaqI	TCGA	4 cut(s)	1128, 1386, 1871, 1894
TatI	WGTACW	2 cut(s)	1539, 1574
TauI	GCSGC	2 cut(s)	1940, 2102
TfiI	GAWTC	5 cut(s)	480, 1422, 1432, 1666, 2167
Tru1I	TTAA	8 cut(s)	240, 504, 611, 960, 1226, 1416, 1601, 1709
Tru9I	TTAA	8 cut(s)	240, 504, 611, 960, 1226, 1416, 1601, 1709
TscAI	CASTG	2 cut(s)	735, 834
TseFI	GTSAC	4 cut(s)	37, 730, 1315, 2110
Tsp45I	GTSAC	4 cut(s)	37, 730, 1315, 2110
TspDTI	ATGAA	8 cut(s)	96, 203, 337, 588, 779, 1290, 1996, 2215
TspRI	CASTG	2 cut(s)	735, 834
VneI	GTGCAC	1 cut(s)	128
VspI	ATTAAT	1 cut(s)	1416
XagI	CCTNNNNNAGG	1 cut(s)	1091
XapI	RAATTY	5 cut(s)	335, 575, 772, 1528, 2036
XceI	RCATGY	3 cut(s)	45, 799, 1172
XcmI	CCANNNNNNNNNTGG	2 cut(s)	516, 1288
XmiI	GTMKAC	2 cut(s)	300, 1986
XmnI	GAANNNNTTC	3 cut(s)	338, 1915, 2171
XspI	CTAG	5 cut(s)	57, 234, 885, 999, 1145
ZraI	GACGTC	1 cut(s)	916
ZrmI	AGTACT	1 cut(s)	1576
Zsp2I	ATGCAT	1 cut(s)	712

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.