Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002658.1

Orthogroup ID

OG0007618

Physical Location & Seq

Genomic Coordinates Forward (+)

96843 .. 101782

Gene Structure 4940 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002658.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3042 bp

atgtcatacgttttgaaggttgcatttgttggggctgtgacttgtacaatgttttctagattgaaattacacccgacagatgaaataaatggcaacctttatctttcttgcttgttctttgggttggtgcacatgatgtttaatgggttttccgagctacctcttatgatatctcggcttccagtcttttacaagcaaagagacaatcactttcatcctgcatgggcatggtctgttgttagtttgcttctgcgcataccttactctattatcgaagctgttgtctggtcttgtgtcgtatactactcggttggatttgcccctggtgctgggagatttttccgtttcatgtttttgctgttctctgtgcaccaaatggctttgggtctcttccggacaatggcatctcttgcaagagatatggtcattgccaatacatttggatcagctgcactaattattatattttcttttggtggattcatcattcccaaagctagcattaagccatggtgggaatgggccttttggatatcaccactatcatatggacaacgtgctctttctgtcaatgaatttacggctgtaaggtggatcaagatatctcctctaactaacagaacaattgggcaaagtgttctccaagaacacaacttaccaaatggtgattactggtattggattggagttggtgctctgttagcttatgcattgcttttcaattgcatagtgactctgaccttgatgtacctaaatccactaaggaaaaatcagacagtgcttccacttgatgacacacaagagagtcctgctgcagatgggggtaaatataagaccgagtctatcccaaaatcaactggagataacggcccaagaaagggaatgatcttaccatttcagccattaacaatgactttccacaatgttaactactctgttgacatgccaaaggaaatgaagtcacaaggtataccagaatcgaagttgaaactcttgtcggaggtgagtggagtgttctcaccaggtgttcttacagctttagttgggtctagtggagctggaaagaccactttgatggacgttcttgctggtaggaaaactggtggatacatagaaggacatatcaagatatctggttacccgaaagagcaacgaacttttgcaagaatagcaggatatgttgagcaaaatgacatacattctcctcaacttacagttgaagagtctctatggttttcttctgctcttcgccttccgaaggaagtcagcacagagaaaagacttttgaagagtctctatggttttcttctgctcttcgccttccgaaggaagtcagcacagagaaaagacttgaaaactggtggatacatagaaggacatatcaagatatctggttacccgaaagagcaacgaacttttgcaagaatagcaggatatgttgagcaaaatgacatacattctcctcaacttacagttgaagagtctctatggttttcttctgctcttcgccttccgaaggaagtcagcacagagaaaagacttgagtttgtcgaagaagtaatgaaactagtagagcttgatactctaaggcatgctttggttggtttgccaggcagttcaggcttatcaacagagcaaagaaaacgcttaacaatttctgttgagcttgttgccaacccttcaattatctttatggatgaacccacatctggacttgatgcaagggcagcagccattgtgatgaggactgttcgtaatacagttgatacaggaagaacggtggtctgcactatacatcaaccaagtattgacatatttgaggcatttgatgagcttcttcttatgaaacgaggggggcaagttatttatggaggaaacctaggccagcactcccagacaatgataaactactttcaggagatcaatggaatcactccgattccaagcgggtacaatccagcaacctggatgctggaggtaaccacaccggcttgtgaacagagaattggggaagacttcgctagcatatacagaaaatcagagcagtacagggaggtggaagagtccatcaagcagtttagcactcctccagctgactcaaaaccattagagtttgcttccacgtattcacaaaacacattggctcaattttggacctgcttatggaaacaaaatcttgtgtattggagaagtccacaatataatgccatgaggttaatctttactacccttgctgcattgatattcggttcagcattttgggatgttggtacaaaaagggactcaattcaatcattgatgatggttatgggagctctttattctgcttgcctgtttcttggggtcaataacgcttcttcagttcagccaattgtttcaattgagaggacagtattttatcgagagaaagcagctggaatgtattctcctttcgcttatgcagcggcccagggccttatagagatcccatacattgctgtgcagacaatagtatacggggtaatcacatacttcatggtcaattttgaaaggacaatcacaaaattcttgctctatattctgttcatgttcctcacattcacctacttcaccctttatggcatggcggctgttggtctcactccctctcaacacctggcagctgtcatctcttctgcattttactcattgtggaatctcctcgccggtttcctcatccccaaaccaaacatcccgccatggtggatatggttttactacatcaccccagttgcatggacacttagaggtattatcacttcccaacttggtgatgtggagaccattcttgtcggaccggcgtttaagggcactgtgaaagaatacttggaagtcagccttggctatggccctggaatgattggagtttcagtagctgtgctactgggtttcaactgcttcatgacatcattcttctacgagaggcccaagtcatcagaaagaggcaaaagtactagcatgaatgaattgctggaacaactcaaagctcaagtggcagagggtcttcaatctgcccagccatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006855 GO:0008150 GO:0009506 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1013

Amino Acids

113.68

Weight (kDa)

8.87

Isoelectric Point (pI)

39.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007618)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29940
fragaria_vesca	FvH4_3g38510
malus_domestica	MD03G1071100.v1.1 MD11G1075100.v1.1
prunus_persica	Prupe.6G057900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0441011 RchiOBHm_Chr5g0069411
rosa_laevigata	RLG00000006130
rosa_multiflora	Rmu_sc0001630.1_g000022 Rmu_sc0002658.1_g000022
rosa_roxburghii	Rroxscaffold_1G00011550 Rroxscaffold_5G00381890
rosa_rugosa	Rorug04G0330000 Rorug04G0330000 Rorug04G0330100 Rorug05G0397400
rosa_samantha	Rh4AG381900 Rh4DG388300 Rh5AG454600 Rh5BG473400 Rh5CG495900 Rh5DG485400
rosa_wichuraiana	Rw4G032920 Rw5G042400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	254
Acc36I	ACCTGC	1 cut(s)	2165
AccI	GTMKAC	3 cut(s)	300, 970, 2493
AccIII	TCCGGA	1 cut(s)	393
AciI	CCGC	4 cut(s)	1947, 2444, 2606, 2714
AclWI	GGATC	3 cut(s)	451, 602, 2458
AcsI	RAATTY	2 cut(s)	575, 2543
AcuI	CTGAAG	1 cut(s)	2343
AdeI	CACNNNGTG	1 cut(s)	1025
AfaI	GTAC	6 cut(s)	46, 749, 1952, 2048, 2272, 2971
AfiI	CCNNNNNNNGG	9 cut(s)	329, 400, 877, 878, 1258, 1326, 1516, 1709, 2163
AhlI	ACTAGT	1 cut(s)	1567
AjnI	CCWGG	7 cut(s)	322, 1021, 1609, 1964, 2448, 2634, 2869
AjuI	GAANNNNNNNTTGG	6 cut(s)	1989, 2021, 2828, 2841, 2860, 2873
Alw21I	GWGCWC	5 cut(s)	132, 372, 562, 697, 2317
Alw26I	GTCTC	7 cut(s)	195, 392, 1230, 1298, 1488, 2621, 2792
Alw44I	GTGCAC	2 cut(s)	128, 368
AlwI	GGATC	3 cut(s)	451, 602, 2458
AlwNI	CAGNNNCTG	1 cut(s)	2894
Aor13HI	TCCGGA	1 cut(s)	393
AoxI	GGCC	7 cut(s)	522, 868, 1882, 2445, 2452, 2866, 2942
ApaLI	GTGCAC	2 cut(s)	128, 368
ApeKI	GCWGC	8 cut(s)	449, 812, 1727, 1730, 2234, 2411, 2441, 2639
ApoI	RAATTY	2 cut(s)	575, 2543
ArsI	GACNNNNNNTTYG	2 cut(s)	267, 299
Asp700I	GAANNNNTTC	1 cut(s)	2422
AspA2I	CCTAGG	1 cut(s)	1879
AspLEI	GCGC	1 cut(s)	255
AspS9I	GGNCC	8 cut(s)	522, 869, 2154, 2446, 2452, 2813, 2867, 2943
AsuHPI	GGTGA	8 cut(s)	528, 677, 1011, 1015, 2572, 2581, 2734, 2801
AsuNHI	GCTAGC	2 cut(s)	497, 2021
AvaII	GGWCC	2 cut(s)	2154, 2813
AvrII	CCTAGG	1 cut(s)	1879
BaeGI	GKGCMC	3 cut(s)	132, 372, 2831
BanII	GRGCYC	1 cut(s)	2317
BarI	GAAGNNNNNNTAC	2 cut(s)	2761, 2793
BbsI	GAAGAC	2 cut(s)	2019, 3014
Bbv12I	GWGCWC	5 cut(s)	132, 372, 562, 697, 2317
BbvI	GCAGC	8 cut(s)	436, 799, 1739, 1742, 2221, 2423, 2453, 2651
BccI	CCATC	4 cut(s)	812, 1069, 2075, 2296
BceAI	ACGGC	2 cut(s)	597, 883
BciT130I	CCWGG	7 cut(s)	324, 1023, 1611, 1966, 2450, 2636, 2871
BciVI	GTATCC	2 cut(s)	1100, 1358
BcoDI	GTCTC	7 cut(s)	195, 392, 1230, 1298, 1488, 2621, 2792
BcuI	ACTAGT	1 cut(s)	1567
BfaI	CTAG	7 cut(s)	57, 498, 1050, 1568, 1880, 2022, 2973
BfmI	CTRYAG	1 cut(s)	813
BfuAI	ACCTGC	1 cut(s)	2165
BfuI	GTATCC	2 cut(s)	1100, 1358
BlnI	CCTAGG	1 cut(s)	1879
BmcAI	AGTACT	1 cut(s)	2971
Bme1390I	CCNGG	7 cut(s)	324, 1023, 1611, 1966, 2450, 2636, 2871
Bme18I	GGWCC	2 cut(s)	2154, 2813
BmgT120I	GGNCC	8 cut(s)	522, 869, 2154, 2446, 2452, 2813, 2867, 2943
BmrFI	CCNGG	7 cut(s)	324, 1023, 1611, 1966, 2450, 2636, 2871
BmrI	ACTGGG	2 cut(s)	2741, 2912
BmsI	GCATC	3 cut(s)	413, 1708, 1959
BmtI	GCTAGC	2 cut(s)	501, 2025
BmuI	ACTGGG	2 cut(s)	2741, 2912
BpiI	GAAGAC	2 cut(s)	2019, 3014
BpmI	CTGGAG	3 cut(s)	879, 1994, 2073
BpuEI	CTTGAG	2 cut(s)	1562, 2991
BsaAI	YACGTR	1 cut(s)	2124
BsaI	GGTCTC	3 cut(s)	392, 2621, 2792
BsaJI	CCNNGG	8 cut(s)	322, 509, 1879, 2448, 2449, 2717, 2857, 2869
BsaWI	WCCGGW	1 cut(s)	393
BsaXI	ACNNNNNCTCC	2 cut(s)	2874, 2904
Bsc4I	CCNNNNNNNGG	9 cut(s)	329, 400, 877, 878, 1258, 1326, 1516, 1709, 2163
Bse118I	RCCGGY	3 cut(s)	1987, 2684, 2815
Bse1I	ACTGG	7 cut(s)	182, 677, 862, 1105, 1363, 2747, 2907
Bse3DI	GCAATG	3 cut(s)	426, 710, 2472
BseAI	TCCGGA	1 cut(s)	393
BseBI	CCWGG	7 cut(s)	324, 1023, 1611, 1966, 2450, 2636, 2871
BseDI	CCNNGG	8 cut(s)	322, 509, 1879, 2448, 2449, 2717, 2857, 2869
BseGI	GGATG	6 cut(s)	214, 1702, 1974, 2269, 2694, 2709
BseLI	CCNNNNNNNGG	9 cut(s)	329, 400, 877, 878, 1258, 1326, 1516, 1709, 2163
BseMI	GCAATG	3 cut(s)	426, 710, 2472
BseNI	ACTGG	7 cut(s)	182, 677, 862, 1105, 1363, 2747, 2907
BseRI	GAGGAG	5 cut(s)	597, 1194, 1452, 2076, 2669
BseSI	GKGCMC	3 cut(s)	132, 372, 2831
BseXI	GCAGC	8 cut(s)	436, 799, 1739, 1742, 2221, 2423, 2453, 2651
BseYI	CCCAGC	2 cut(s)	329, 3033
BsgI	GTGCAG	3 cut(s)	435, 1771, 2501
BshFI	GGCC	7 cut(s)	524, 870, 1884, 2447, 2454, 2868, 2944
BsiHKAI	GWGCWC	5 cut(s)	132, 372, 562, 697, 2317
BsiSI	CCGG	4 cut(s)	394, 1988, 2685, 2816
BslFI	GGGAC	1 cut(s)	2294
BslI	CCNNNNNNNGG	9 cut(s)	329, 400, 877, 878, 1258, 1326, 1516, 1709, 2163
BsmAI	GTCTC	7 cut(s)	195, 392, 1230, 1298, 1488, 2621, 2792
BsmFI	GGGAC	1 cut(s)	2294
BsnI	GGCC	7 cut(s)	524, 870, 1884, 2447, 2454, 2868, 2944
Bso31I	GGTCTC	3 cut(s)	392, 2621, 2792
Bsp1286I	GDGCHC	6 cut(s)	132, 372, 562, 697, 2317, 2831
Bsp13I	TCCGGA	1 cut(s)	393
Bsp1407I	TGTACA	1 cut(s)	44
Bsp143I	GATC	5 cut(s)	443, 594, 885, 1920, 2463
Bsp19I	CCATGG	2 cut(s)	509, 2717
BspACI	CCGC	4 cut(s)	1947, 2444, 2606, 2714
BspANI	GGCC	7 cut(s)	524, 870, 1884, 2447, 2454, 2868, 2944
BspEI	TCCGGA	1 cut(s)	393
BspHI	TCATGA	1 cut(s)	2919
BspMAI	CTGCAG	1 cut(s)	817
BspMI	ACCTGC	1 cut(s)	2165
BspOI	GCTAGC	2 cut(s)	501, 2025
BspPI	GGATC	3 cut(s)	451, 602, 2458
BspQI	GCTCTTC	3 cut(s)	1251, 1319, 1509
BspTNI	GGTCTC	3 cut(s)	392, 2621, 2792
BsrDI	GCAATG	3 cut(s)	426, 710, 2472
BsrFI	RCCGGY	3 cut(s)	1987, 2684, 2815
BsrGI	TGTACA	1 cut(s)	44
BsrI	ACTGG	7 cut(s)	182, 677, 862, 1105, 1363, 2747, 2907
BssAI	RCCGGY	3 cut(s)	1987, 2684, 2815
BssECI	CCNNGG	8 cut(s)	322, 509, 1879, 2448, 2449, 2717, 2857, 2869
BssMI	GATC	5 cut(s)	443, 594, 885, 1920, 2463
BssNAI	GTATAC	3 cut(s)	301, 971, 2494
BssT1I	CCWWGG	4 cut(s)	509, 1879, 2717, 2857
Bst1107I	GTATAC	3 cut(s)	301, 971, 2494
Bst2UI	CCWGG	7 cut(s)	324, 1023, 1611, 1966, 2450, 2636, 2871
Bst4CI	ACNGT	8 cut(s)	778, 1216, 1474, 1750, 1762, 1780, 2392, 2833
Bst6I	CTCTTC	9 cut(s)	395, 1215, 1251, 1283, 1319, 1473, 1509, 2055, 2656
BstAPI	GCANNNNNTGC	1 cut(s)	410
BstAUI	TGTACA	1 cut(s)	44
BstBAI	YACGTR	1 cut(s)	2124
BstC8I	GCNNGC	5 cut(s)	499, 1593, 1886, 2023, 2329
BstDEI	CTNAG	3 cut(s)	761, 1586, 2762
BstDSI	CCRYGG	2 cut(s)	509, 2717
BstEII	GGTNACC	3 cut(s)	1136, 1394, 1978
BstENI	CCTNNNNNAGG	3 cut(s)	1256, 1324, 1514
BstF5I	GGATG	6 cut(s)	214, 1702, 1974, 2269, 2694, 2709
BstHHI	GCGC	1 cut(s)	255
BstKTI	GATC	5 cut(s)	446, 597, 888, 1923, 2466
BstMAI	GTCTC	7 cut(s)	195, 392, 1230, 1298, 1488, 2621, 2792
BstMBI	GATC	5 cut(s)	443, 594, 885, 1920, 2463
BstMWI	GCNNNNNNNGC	9 cut(s)	326, 410, 701, 1169, 1427, 1620, 1727, 2441, 3011
BstNI	CCWGG	7 cut(s)	324, 1023, 1611, 1966, 2450, 2636, 2871
BstNSI	RCATGY	2 cut(s)	946, 1595
BstPI	GGTNACC	3 cut(s)	1136, 1394, 1978
BstSCI	CCNGG	7 cut(s)	322, 1021, 1609, 1964, 2448, 2634, 2869
BstSFI	CTRYAG	1 cut(s)	813
BstSLI	GKGCMC	3 cut(s)	132, 372, 2831
BstV1I	GCAGC	8 cut(s)	436, 799, 1739, 1742, 2221, 2423, 2453, 2651
BstV2I	GAAGAC	2 cut(s)	2019, 3014
BstX2I	RGATCY	1 cut(s)	2463
BstXI	CCANNNNNNTGG	3 cut(s)	1075, 1965, 2754
BstYI	RGATCY	1 cut(s)	2463
BstZ17I	GTATAC	3 cut(s)	301, 971, 2494
BsuI	GTATCC	2 cut(s)	1100, 1358
BsuRI	GGCC	7 cut(s)	524, 870, 1884, 2447, 2454, 2868, 2944
BtgI	CCRYGG	2 cut(s)	509, 2717
BtsCI	GGATG	6 cut(s)	214, 1702, 1974, 2269, 2694, 2709
BtsIMutI	CAGTG	2 cut(s)	783, 2829
BveI	ACCTGC	1 cut(s)	2165
Cac8I	GCNNGC	5 cut(s)	499, 1593, 1886, 2023, 2329
CaiI	CAGNNNCTG	1 cut(s)	2894
CciI	TCATGA	1 cut(s)	2919
CfoI	GCGC	1 cut(s)	255
Cfr10I	RCCGGY	3 cut(s)	1987, 2684, 2815
Cfr13I	GGNCC	8 cut(s)	522, 869, 2154, 2446, 2452, 2813, 2867, 2943
CpoI	CGGWCCG	1 cut(s)	2813
CsiI	ACCWGGT	1 cut(s)	1021
Csp6I	GTAC	6 cut(s)	45, 748, 1951, 2047, 2271, 2970
CspI	CGGWCCG	1 cut(s)	2813
CviQI	GTAC	6 cut(s)	45, 748, 1951, 2047, 2271, 2970
DdeI	CTNAG	3 cut(s)	761, 1586, 2762
DpnI	GATC	5 cut(s)	445, 596, 887, 1922, 2465
DpnII	GATC	5 cut(s)	443, 594, 885, 1920, 2463
DraIII	CACNNNGTG	1 cut(s)	1025
Eam1104I	CTCTTC	9 cut(s)	395, 1215, 1251, 1283, 1319, 1473, 1509, 2055, 2656
EarI	CTCTTC	9 cut(s)	395, 1215, 1251, 1283, 1319, 1473, 1509, 2055, 2656
Ecl136II	GAGCTC	1 cut(s)	2315
Eco130I	CCWWGG	4 cut(s)	509, 1879, 2717, 2857
Eco24I	GRGCYC	1 cut(s)	2317
Eco31I	GGTCTC	3 cut(s)	392, 2621, 2792
Eco32I	GATATC	5 cut(s)	171, 534, 603, 1131, 1389
Eco47I	GGWCC	2 cut(s)	2154, 2813
Eco53kI	GAGCTC	1 cut(s)	2315
Eco57I	CTGAAG	1 cut(s)	2343
Eco91I	GGTNACC	3 cut(s)	1136, 1394, 1978
EcoICRI	GAGCTC	1 cut(s)	2315
EcoNI	CCTNNNNNAGG	3 cut(s)	1256, 1324, 1514
EcoO109I	RGGNCCY	1 cut(s)	2452
EcoO65I	GGTNACC	3 cut(s)	1136, 1394, 1978
EcoRII	CCWGG	7 cut(s)	322, 1021, 1609, 1964, 2448, 2634, 2869
EcoRV	GATATC	5 cut(s)	171, 534, 603, 1131, 1389
EcoT14I	CCWWGG	4 cut(s)	509, 1879, 2717, 2857
EcoT22I	ATGCAT	1 cut(s)	712
EcoT38I	GRGCYC	1 cut(s)	2317
ErhI	CCWWGG	4 cut(s)	509, 1879, 2717, 2857
FalI	AAGNNNNNCTT	4 cut(s)	1579, 1611, 2841, 2873
FaqI	GGGAC	1 cut(s)	2294
FauI	CCCGC	2 cut(s)	1940, 2721
FauNDI	CATATG	1 cut(s)	547
FblI	GTMKAC	3 cut(s)	300, 970, 2493
FokI	GGATG	6 cut(s)	201, 1709, 1981, 2276, 2681, 2696
FriOI	GRGCYC	1 cut(s)	2317
FspBI	CTAG	7 cut(s)	57, 498, 1050, 1568, 1880, 2022, 2973
FspI	TGCGCA	1 cut(s)	254
GlaI	GCGC	1 cut(s)	254
GsaI	CCCAGC	2 cut(s)	333, 3037
GsuI	CTGGAG	3 cut(s)	879, 1994, 2073
HaeIII	GGCC	7 cut(s)	524, 870, 1884, 2447, 2454, 2868, 2944
HapII	CCGG	4 cut(s)	394, 1988, 2685, 2816
HhaI	GCGC	1 cut(s)	255
Hin6I	GCGC	1 cut(s)	253
HinP1I	GCGC	1 cut(s)	253
HincII	GTYRAC	2 cut(s)	928, 940
HindII	GTYRAC	2 cut(s)	928, 940
HpaI	GTTAAC	1 cut(s)	928
HpaII	CCGG	4 cut(s)	394, 1988, 2685, 2816
HphI	GGTGA	8 cut(s)	528, 677, 1011, 1015, 2572, 2581, 2734, 2801
Hpy166II	GTNNAC	9 cut(s)	130, 301, 370, 928, 940, 971, 1997, 2195, 2494
Hpy188III	TCNNGA	9 cut(s)	57, 394, 598, 1126, 1384, 1710, 1916, 2402, 2920
Hpy8I	GTNNAC	9 cut(s)	130, 301, 370, 928, 940, 971, 1997, 2195, 2494
HpyCH4III	ACNGT	8 cut(s)	778, 1216, 1474, 1750, 1762, 1780, 2392, 2833
HpyCH4IV	ACGT	4 cut(s)	9, 556, 1080, 2123
HpyF10VI	GCNNNNNNNGC	9 cut(s)	326, 410, 701, 1169, 1427, 1620, 1727, 2441, 3011
HpyF3I	CTNAG	3 cut(s)	761, 1586, 2762
HpySE526I	ACGT	4 cut(s)	9, 556, 1080, 2123
HspAI	GCGC	1 cut(s)	253
Kpn2I	TCCGGA	1 cut(s)	393
KspAI	GTTAAC	1 cut(s)	928
Kzo9I	GATC	5 cut(s)	443, 594, 885, 1920, 2463
LguI	GCTCTTC	3 cut(s)	1251, 1319, 1509
LmnI	GCTCC	2 cut(s)	1055, 2312
Lsp1109I	GCAGC	8 cut(s)	436, 799, 1739, 1742, 2221, 2423, 2453, 2651
LweI	GCATC	3 cut(s)	413, 1708, 1959
MabI	ACCWGGT	1 cut(s)	1021
MaeI	CTAG	7 cut(s)	57, 498, 1050, 1568, 1880, 2022, 2973
MaeII	ACGT	4 cut(s)	9, 556, 1080, 2123
MaeIII	GTNAC	6 cut(s)	37, 730, 960, 1136, 1394, 1978
MalI	GATC	5 cut(s)	445, 596, 887, 1922, 2465
MboI	GATC	5 cut(s)	443, 594, 885, 1920, 2463
MfeI	CAATTG	4 cut(s)	624, 721, 2370, 2379
MflI	RGATCY	1 cut(s)	2463
MhlI	GDGCHC	6 cut(s)	132, 372, 562, 697, 2317, 2831
MlyI	GAGTC	9 cut(s)	727, 814, 848, 1232, 1300, 1490, 2072, 2090, 2276
MmeI	TCCRAC	3 cut(s)	292, 978, 2791
Mph1103I	ATGCAT	1 cut(s)	712
MroI	TCCGGA	1 cut(s)	393
MroXI	GAANNNNTTC	1 cut(s)	2422
MseI	TTAA	7 cut(s)	141, 504, 905, 927, 1649, 2216, 2823
MslI	CAYNNNNRTG	4 cut(s)	226, 1073, 1739, 2477
MspA1I	CMGCKG	5 cut(s)	449, 2093, 2414, 2444, 2642
MspI	CCGG	4 cut(s)	394, 1988, 2685, 2816
MspR9I	CCNGG	7 cut(s)	324, 1023, 1611, 1966, 2450, 2636, 2871
MunI	CAATTG	4 cut(s)	624, 721, 2370, 2379
MvaI	CCWGG	7 cut(s)	324, 1023, 1611, 1966, 2450, 2636, 2871
MwoI	GCNNNNNNNGC	9 cut(s)	326, 410, 701, 1169, 1427, 1620, 1727, 2441, 3011
NcoI	CCATGG	2 cut(s)	509, 2717
NdeI	CATATG	1 cut(s)	547
NdeII	GATC	5 cut(s)	443, 594, 885, 1920, 2463
NheI	GCTAGC	2 cut(s)	497, 2021
NmeAIII	GCCGAG	1 cut(s)	154
NmuCI	GTSAC	3 cut(s)	37, 730, 960
NsbI	TGCGCA	1 cut(s)	254
NsiI	ATGCAT	1 cut(s)	712
NspI	RCATGY	2 cut(s)	946, 1595
PaeI	GCATGC	1 cut(s)	1595
PagI	TCATGA	1 cut(s)	2919
PasI	CCCWGGG	1 cut(s)	2449
PciSI	GCTCTTC	3 cut(s)	1251, 1319, 1509
PdmI	GAANNNNTTC	1 cut(s)	2422
PfeI	GAWTC	5 cut(s)	480, 977, 1929, 1939, 2674
PflFI	GACNNNGTC	1 cut(s)	838
PleI	GAGTC	9 cut(s)	727, 813, 847, 1231, 1299, 1489, 2071, 2090, 2276
PpsI	GAGTC	9 cut(s)	727, 813, 847, 1231, 1299, 1489, 2071, 2090, 2276
Ppu21I	YACGTR	1 cut(s)	2124
Psp124BI	GAGCTC	1 cut(s)	2317
Psp6I	CCWGG	7 cut(s)	322, 1021, 1609, 1964, 2448, 2634, 2869
PspEI	GGTNACC	3 cut(s)	1136, 1394, 1978
PspFI	CCCAGC	2 cut(s)	329, 3033
PspGI	CCWGG	7 cut(s)	322, 1021, 1609, 1964, 2448, 2634, 2869
PspPI	GGNCC	8 cut(s)	522, 869, 2154, 2446, 2452, 2813, 2867, 2943
PsrI	GAACNNNNNNTAC	2 cut(s)	639, 671
PstI	CTGCAG	1 cut(s)	817
PstNI	CAGNNNCTG	1 cut(s)	2894
PsuI	RGATCY	1 cut(s)	2463
PsyI	GACNNNGTC	1 cut(s)	838
PvuII	CAGCTG	4 cut(s)	449, 2093, 2414, 2642
RsaI	GTAC	6 cut(s)	46, 749, 1952, 2048, 2272, 2971
RsaNI	GTAC	6 cut(s)	45, 748, 1951, 2047, 2271, 2970
RseI	CAYNNNNRTG	4 cut(s)	226, 1073, 1739, 2477
Rsr2I	CGGWCCG	1 cut(s)	2813
RsrII	CGGWCCG	1 cut(s)	2813
SacI	GAGCTC	1 cut(s)	2317
SapI	GCTCTTC	3 cut(s)	1251, 1319, 1509
SaqAI	TTAA	7 cut(s)	141, 504, 905, 927, 1649, 2216, 2823
Sau3AI	GATC	5 cut(s)	443, 594, 885, 1920, 2463
Sau96I	GGNCC	8 cut(s)	522, 869, 2154, 2446, 2452, 2813, 2867, 2943
ScaI	AGTACT	1 cut(s)	2971
SchI	GAGTC	9 cut(s)	727, 814, 848, 1232, 1300, 1490, 2072, 2090, 2276
ScrFI	CCNGG	7 cut(s)	324, 1023, 1611, 1966, 2450, 2636, 2871
SduI	GDGCHC	6 cut(s)	132, 372, 562, 697, 2317, 2831
SexAI	ACCWGGT	1 cut(s)	1021
SfaNI	GCATC	3 cut(s)	413, 1708, 1959
SfcI	CTRYAG	1 cut(s)	813
SinI	GGWCC	2 cut(s)	2154, 2813
SmiMI	CAYNNNNRTG	4 cut(s)	226, 1073, 1739, 2477
SmlI	CTYRAG	2 cut(s)	1541, 3006
SmoI	CTYRAG	2 cut(s)	1541, 3006
SpeI	ACTAGT	1 cut(s)	1567
SphI	GCATGC	1 cut(s)	1595
SsiI	CCGC	4 cut(s)	1947, 2444, 2606, 2714
SspMI	CTAG	7 cut(s)	57, 498, 1050, 1568, 1880, 2022, 2973
SstI	GAGCTC	1 cut(s)	2317
StyD4I	CCNGG	7 cut(s)	322, 1021, 1609, 1964, 2448, 2634, 2869
StyI	CCWWGG	4 cut(s)	509, 1879, 2717, 2857
TaaI	ACNGT	8 cut(s)	778, 1216, 1474, 1750, 1762, 1780, 2392, 2833
TaiI	ACGT	4 cut(s)	12, 559, 1083, 2126
TaqI	TCGA	4 cut(s)	273, 980, 1551, 2401
TaqII	GACCGA	1 cut(s)	851
TatI	WGTACW	3 cut(s)	44, 2046, 2969
TauI	GCSGC	2 cut(s)	2447, 2609
TfiI	GAWTC	5 cut(s)	480, 977, 1929, 1939, 2674
Tru1I	TTAA	7 cut(s)	141, 504, 905, 927, 1649, 2216, 2823
Tru9I	TTAA	7 cut(s)	141, 504, 905, 927, 1649, 2216, 2823
TscAI	CASTG	2 cut(s)	783, 2836
TseFI	GTSAC	3 cut(s)	37, 730, 960
TseI	GCWGC	8 cut(s)	449, 812, 1727, 1730, 2234, 2411, 2441, 2639
Tsp45I	GTSAC	3 cut(s)	37, 730, 960
TspGWI	ACGGA	1 cut(s)	332
TspRI	CASTG	2 cut(s)	783, 2836
Tth111I	GACNNNGTC	1 cut(s)	838
VneI	GTGCAC	2 cut(s)	128, 368
VpaK11BI	GGWCC	2 cut(s)	2154, 2813
XagI	CCTNNNNNAGG	3 cut(s)	1256, 1324, 1514
XapI	RAATTY	2 cut(s)	575, 2543
XbaI	TCTAGA	1 cut(s)	56
XceI	RCATGY	2 cut(s)	946, 1595
XcmI	CCANNNNNNNNNTGG	2 cut(s)	516, 2724
XmaJI	CCTAGG	1 cut(s)	1879
XmiI	GTMKAC	3 cut(s)	300, 970, 2493
XmnI	GAANNNNTTC	1 cut(s)	2422
XspI	CTAG	7 cut(s)	57, 498, 1050, 1568, 1880, 2022, 2973
ZrmI	AGTACT	1 cut(s)	2971
Zsp2I	ATGCAT	1 cut(s)	712

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.