Rh4AG381900
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0007618
Physical Location & Seq
Reverse (-)
68774394 .. 68781790
7397 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG381900.1

Sequence Viewer

Length: 3672 bp
ATGGCGGCGTCGCAGACCATCGACGTCCGGAACCTCAACCGCGAGCTCGTCCTCAAGAAAGCCCTCGCCACTGACGATCAGGACAACCAGCACCTCCTCGCCGGAATAAAAGAACGCCTCGACAGGTACGCCTACGTTACCGACTCCCCCCCACCCCTCTCTCTCTCTCTCGACGTTCAAACAGGATCAAGAGCTTTGCCTACTCTCATCAACTATATTCGTGATGGTATAGAGGGTATTTTAACTAGTTTCAGGATTGTTAAACCCAAGCGACGGTCTTTAACGATTTTGAACAACATCAGCGGCCTTATCAAACCCGGAAGGATGACTTTGCTTTTAGGACCCCCAAGTTCTGGCAAATCCACTTTGCTCATGACTCTTGCAGGAAAACTAGACTGCAACTTAAGGAATAGTGGTACCATCACATATAATGGCCATAAGCTTGATGAGTTCTGCGTTCAAAGAACATCTGCTTACATAAGCCAAACAGATAATCACATTGCAGAACTCACCGTAAGAGAAACCTTGGACTTTGCAGCTAGAGTTCAAGGTACAAGCGAAGGTTTTGCAGCGTGCTTGAAACAGCTGGTCAGACTGGAGCAGGAAAGACAAATAAGGCCGGATCCACATATTGCTGCCTTTATGAAGGCATCATCTAGGAAAAGGGTTACTACAGGTGAAATGACAGTTGGACCAAGAAAAGCCCTGTTTATGGATGAAATATCTACTGGACTGGATAGTTCTACTACATACCAAATTGTAAAATGTATTGGGAATTTTGTTCATCAGATGGAAGCTACAGTACTAATGGCTCTGCTTCAACCTGCACCTGAGACATTTGAATTGTTTGATGATCTAGTGCTCCTATCCGAAGGTCACGTGGTAACGTCTAAAAAGGATCAAGCTCAGTACTGGGCTGATTGTTCGAAACCATACACATACCTTTCTGTTTCAGAAATTGCAGAAGCCTTTAAGGAGTCCAGGTTTGGAAGGTCTGTGGATGACACTCTCTCTGCTCCATATCATAAATCTAGCTGTCTTCCTTCGGCTTTGCCAAAAACTAAATATGCAACCTCAAAATGGGAGCTTTGTAAAGCATGCTTTTCACGAGAACTGCTGTTGATCAGCAGGCATAGGTTTCTTTACACATTTAGGACCTGCCAGGTTGCATTTGTTGGATTTGTGACATGCACAACATTTCCTAGATGGAAATTACACCCCACAGATGAAATAATGGCAGCCTTTCTCTTTCTTGCTTGTTCTTTGGTTGGTTTTGCCCCTGGTGCTGGGAAATTTTTCCGTTTCATGTTTTTGCTATTTTCTGTGCACCAAATGGCTTTGGGTCTCTTCCGGACATTGGCATCTCTTGCAAGAGATATGGTCATTGCCAATGCATTTGGATCAGCTGCATTACTTGTTATATTTTTGTTGGGTGGATTCGTTATTCCCAAAGATAGCATTAAGCCATGGTGGCAATGGGCCTTTTGGCTATCACCACTATCATATGGACAACGCGCTCTTTCTGTCAATGAATTTACTGCTGTAAGGTGGATCAAGATAGCTCCTTTAACAAACAGAACAATTGGGCAAAATGTCCTCCAAGAACACAACTTACCAAATGGTGATTATTGGTATTGGATTGGAGTTGGTAGTCTGTTAGCTTATGCATTGCTTTTCAATTGCACAGTGACTCTGGCCTTGACGTACCTAAATCCACTAAGGAAGTACCAGACAGTGCTTCCACTTGATGACACAGAAGGGAGTCCTGCTGCAGATGGGGGTAAAAATAAGACCGTGTCTAGCCCAAAATCAGCTGGAGGTAACAGCCCAGTAAAGGGAATGATCTTACCATTTCAGCCATTAACAATGACTTTCCACAATGTTACCTACTCTGTTCACAATCCAAAGGAGATGAAGTCACAAGGTATACCAGAATCGAAGTTGCAACTCTTGTCGAAGGTGAGCGGAGTATTCTCACCAGGTATTCTTACAGCTTTAGTTGGGTCTAGTGGAGCTGGAAAGACCACTTTGATGGACGTCCTTGCTGGTAGGAAAACTGGTGGATACATAGAAGGAGATATTAAGATATCTGATTACCCGAGAGAGCAACGTACTTTTGCTAGAGTAGCAGGATATGTTGAGCAAAATGACATACATTCTCCTCAAGTTACAGTTGAGGAGAGTCTATGGTTTTCTTCTGCTCTTCGCCTTCCAAAGGAAGTCAGCACAGAGACAAGACTCGTGTTTGTCGAAGAAGTAATGGAACTAGTAGAGCTTGATACTCTAAGGCATGTTTTGGTTGGTGTGCCAGGCAGTTCAGGCTTATCAACAGAGCAAAGAAAACGCTTAACAATCGCTGTTGAGCTTGTTGCGAACCCTTCAATTATCTTTATGGATGAACCCACATCTGGACTGGACGCAAGGGCAGCAGCCATTGTGATGAGGACTGTTCGTAATACTGTTGATACAGGAAGAACGGTGGTCTGCACTATACACCAACCAAGTATCGACATTTTTGAGTCATTTGACGAGCTTCTTCTTATGAAACGAGGGGGGCAAGTTATATATGGAGGAAAGCTAGGCCAGCACTCCCAGACAATGATAAACTACTTTCAGGAGATTAATGGAATCACTCCGATTCCAAGCGGGTACAATCCAGCAACCTGGATGCTGGAGGTAACCACACCGTCTTGTAAACAGAGAATCGGAGAAGACTTCGCTACCATATACAGGAATTCAGAGCAGTACAGGGAGGTGGAAGAGTCCATCAAGCAGTTGAGTACTCCTCCAACCGACTCAAAACCATTAAAGTTTGCTTCCACATATTCACAGAACACATTGGCTCAACTTAGGAACTGCTTATGGAAACAGAATCTCGTGTATTGGAGAAGTCCACAATATAATGCGATGAGGTTAATCTTTACTATCCTTGCTGCATTGATACTGGGCTCGGCATTTTGGGATGTCGGTACAAAAAGGGACTCGCTTCAATCATTGATGATGGTTATGGGAGCTCTTTATTCTGCTTGTTTGTTTCTTGGGGTCAATAACGCTTCTTCAGTTCAGCCGATTGTTTCGATTGAGAGGACGGTATTTTATCGAGAGAAAGCAGCTGGAATGTATTCTTCTTTGGCTTATGCAGCGGCCCAGGGCCTTAAAGAGATCCCATACATTGCTGTGCAGACAATAGTATACGGGGTGATCACATACTTCATGATAAATTTTGAAAGGACAATCACAAAATTCTTGCTCTATATTCTGATCATGTTCCTCACTTTCGTATATTTCACTCTTTTCGGCATGGCGGCTGTTTCTGTCACAGCTTCTCAACCCCTGGCAGCTGCCATCTCTGCTGCATTTTACTCATTGTGGAATCTATTCTCTGGTTTCCTCGTCCCCAAACCAAACATCCCGGTATGGTGGCTTTGGTTTTACTACATCTCCCCAGTTGCATGGACACTCAGAGGTATTATCACTTCCCAACTTGGTGATGTGGAGACCATTCTTGTCGGACCTGCGTTTAAGGGCACCTTGAAAGAATACTTGGAAGTCAGCCTTGGCTATGGCCCTGGGATGATTGGAGTTTCAGTAGCTGTGCTTCTGGGCTTCAACGTCCTTTTGTTCAGTATCTTTGCCTTCTCCATCAAATTTCTCAACTTCCAGAGTAGATAG

Protein Analysis

1223

Amino Acids

136.01

Weight (kDa)

8.99

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 97 - 239 1.1e-11 ABC transporter
ABC2_membrane PF01061 412 - 512 1.3e-24 ABC-2 type transporter
PDR_assoc PF08370 517 - 579 2.4e-22 Plant PDR ABC transporter associated
ABC_tran PF00005 652 - 803 2.2e-20 ABC transporter
ABC2_membrane PF01061 949 - 1161 3.6e-55 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 27, 2040
Acc36I ACCTGC 3 cut(s) 832, 1166, 3523
Acc65I GGTACC 1 cut(s) 416
AccB1I GGYRCC 2 cut(s) 416, 3527
AccB7I CCANNNNNTGG 1 cut(s) 353
AccBSI CCGCTC 1 cut(s) 1965
AccI GTMKAC 2 cut(s) 1927, 3192
AccII CGCG 2 cut(s) 42, 1515
AccIII TCCGGA 2 cut(s) 27, 1350
AciI CCGC 7 cut(s) 5, 40, 303, 1965, 2646, 3143, 3305
AclWI GGATC 7 cut(s) 193, 617, 630, 906, 1408, 1559, 3157
AcoI YGGCCR 1 cut(s) 433
AcsI RAATTY 7 cut(s) 775, 1292, 1532, 2734, 3220, 3242, 3647
AcuI CTGAAG 1 cut(s) 3042
AcvI CACGTG 1 cut(s) 880
AcyI GRCGYC 3 cut(s) 8, 24, 2037
AflII CTTAAG 1 cut(s) 403
AhlI ACTAGT 2 cut(s) 245, 2266
AjnI CCWGG 9 cut(s) 980, 1161, 1279, 1978, 2308, 2663, 3147, 3333, 3568
AjuI GAANNNNNNNTTGG 6 cut(s) 672, 704, 3527, 3540, 3559, 3572
Alw21I GWGCWC 4 cut(s) 48, 864, 1329, 3016
Alw26I GTCTC 4 cut(s) 827, 1349, 2225, 3491
Alw44I GTGCAC 1 cut(s) 1325
AlwI GGATC 7 cut(s) 193, 617, 630, 906, 1408, 1559, 3157
AlwNI CAGNNNCTG 1 cut(s) 3593
Ama87I CYCGRG 1 cut(s) 2098
Aor13HI TCCGGA 2 cut(s) 27, 1350
AoxI GGCC 9 cut(s) 304, 433, 617, 1479, 1695, 2581, 3144, 3151, 3565
ApaLI GTGCAC 1 cut(s) 1325
ApoI RAATTY 7 cut(s) 775, 1292, 1532, 2734, 3220, 3242, 3647
AseI ATTAAT 1 cut(s) 2622
Asp700I GAANNNNTTC 3 cut(s) 1295, 3121, 3377
Asp718I GGTACC 1 cut(s) 416
AspLEI GCGC 1 cut(s) 1517
AspS9I GGNCC 8 cut(s) 341, 692, 1155, 1479, 3145, 3151, 3512, 3566
AsuC2I CCSGG 2 cut(s) 318, 3413
AsuHPI GGTGA 8 cut(s) 502, 689, 1485, 1634, 1968, 1972, 3211, 3500
AsuII TTCGAA 1 cut(s) 926
AvaI CYCGRG 1 cut(s) 2098
AvaII GGWCC 4 cut(s) 341, 692, 1155, 3512
BaeGI GKGCMC 2 cut(s) 1329, 3530
BalI TGGCCA 1 cut(s) 435
BamHI GGATCC 1 cut(s) 622
BanI GGYRCC 2 cut(s) 416, 3527
BanII GRGCYC 3 cut(s) 48, 2951, 3016
BarI GAAGNNNNNNTAC 6 cut(s) 786, 818, 3460, 3492, 3582, 3614
BauI CACGAG 3 cut(s) 1107, 2240, 2876
BbrPI CACGTG 1 cut(s) 880
BbsI GAAGAC 2 cut(s) 1031, 2718
Bbv12I GWGCWC 4 cut(s) 48, 864, 1329, 3016
BcgI CGANNNNNNTGC 2 cut(s) 548, 582
BciT130I CCWGG 9 cut(s) 982, 1163, 1281, 1980, 2310, 2665, 3149, 3335, 3570
BciVI GTATCC 1 cut(s) 2057
BclI TGATCA 3 cut(s) 1122, 3201, 3261
BcnI CCSGG 2 cut(s) 318, 3413
BcoDI GTCTC 4 cut(s) 827, 1349, 2225, 3491
BcuI ACTAGT 2 cut(s) 245, 2266
BfmI CTRYAG 3 cut(s) 672, 798, 1770
BfrI CTTAAG 1 cut(s) 403
BfuAI ACCTGC 3 cut(s) 832, 1166, 3523
BfuI GTATCC 1 cut(s) 2057
BglI GCCNNNNNGGC 1 cut(s) 1471
BmcAI AGTACT 3 cut(s) 804, 911, 2782
Bme18I GGWCC 4 cut(s) 341, 692, 1155, 3512
BmeT110I CYCGRG 1 cut(s) 2098
BmgT120I GGNCC 8 cut(s) 341, 692, 1155, 1479, 3145, 3151, 3512, 3566
BmiI GGNNCC 5 cut(s) 32, 343, 418, 624, 3529
BmrI ACTGGG 4 cut(s) 922, 1823, 2954, 3440
BmsI GCATC 3 cut(s) 659, 1370, 2658
BmuI ACTGGG 4 cut(s) 922, 1823, 2954, 3440
BpiI GAAGAC 2 cut(s) 1031, 2718
BplI GAGNNNNNCTC 2 cut(s) 2770, 2802
BpmI CTGGAG 3 cut(s) 617, 1836, 2693
Bpu14I TTCGAA 1 cut(s) 926
BpuEI CTTGAG 2 cut(s) 38, 2148
BpuMI CCSGG 2 cut(s) 318, 3413
BsaAI YACGTR 1 cut(s) 880
BsaHI GRCGYC 3 cut(s) 8, 24, 2037
BsaI GGTCTC 2 cut(s) 1349, 3491
BsaJI CCNNGG 9 cut(s) 525, 1279, 1466, 3147, 3148, 3333, 3556, 3568, 3569
BsaWI WCCGGW 2 cut(s) 27, 1350
BsaXI ACNNNNNCTCC 8 cut(s) 968, 998, 1901, 1931, 3425, 3455, 3573, 3603
Bse1I ACTGG 9 cut(s) 600, 733, 738, 917, 1829, 2062, 2418, 2949, 3446
Bse3DI GCAATG 5 cut(s) 498, 1383, 1481, 1667, 3171
BseAI TCCGGA 2 cut(s) 27, 1350
BseBI CCWGG 9 cut(s) 982, 1163, 1281, 1980, 2310, 2665, 3149, 3335, 3570
BseDI CCNNGG 9 cut(s) 525, 1279, 1466, 3147, 3148, 3333, 3556, 3568, 3569
BseGI GGATG 8 cut(s) 330, 721, 1006, 2401, 2673, 2968, 3408, 3579
BseMI GCAATG 5 cut(s) 498, 1383, 1481, 1667, 3171
BseMII CTCAG 3 cut(s) 822, 920, 3475
BseNI ACTGG 9 cut(s) 600, 733, 738, 917, 1829, 2062, 2418, 2949, 3446
BseRI GAGGAG 4 cut(s) 86, 2151, 2192, 2775
BseSI GKGCMC 2 cut(s) 1329, 3530
BseYI CCCAGC 1 cut(s) 1286
BsgI GTGCAG 3 cut(s) 810, 2470, 3200
Bsh1236I CGCG 2 cut(s) 42, 1515
BshFI GGCC 9 cut(s) 306, 435, 619, 1481, 1697, 2583, 3146, 3153, 3567
BshNI GGYRCC 2 cut(s) 416, 3527
BsiHKAI GWGCWC 4 cut(s) 48, 864, 1329, 3016
BsiHKCI CYCGRG 1 cut(s) 2098
BsiSI CCGG 6 cut(s) 28, 102, 318, 620, 1351, 3413
BslFI GGGAC 2 cut(s) 2993, 3380
BsmAI GTCTC 4 cut(s) 827, 1349, 2225, 3491
BsmFI GGGAC 2 cut(s) 2993, 3380
BsnI GGCC 9 cut(s) 306, 435, 619, 1481, 1697, 2583, 3146, 3153, 3567
Bso31I GGTCTC 2 cut(s) 1349, 3491
BsoBI CYCGRG 1 cut(s) 2098
Bsp119I TTCGAA 1 cut(s) 926
Bsp1286I GDGCHC 6 cut(s) 48, 864, 1329, 2951, 3016, 3530
Bsp13I TCCGGA 2 cut(s) 27, 1350
Bsp19I CCATGG 1 cut(s) 1466
BspACI CCGC 7 cut(s) 5, 40, 303, 1965, 2646, 3143, 3305
BspANI GGCC 9 cut(s) 306, 435, 619, 1481, 1697, 2583, 3146, 3153, 3567
BspCNI CTCAG 3 cut(s) 823, 919, 3474
BspEI TCCGGA 2 cut(s) 27, 1350
BspFNI CGCG 2 cut(s) 42, 1515
BspHI TCATGA 2 cut(s) 372, 3213
BspLI GGNNCC 5 cut(s) 32, 343, 418, 624, 3529
BspMAI CTGCAG 1 cut(s) 1774
BspMI ACCTGC 3 cut(s) 832, 1166, 3523
BspPI GGATC 7 cut(s) 193, 617, 630, 906, 1408, 1559, 3157
BspQI GCTCTTC 1 cut(s) 2208
BspT104I TTCGAA 1 cut(s) 926
BspT107I GGYRCC 2 cut(s) 416, 3527
BspTI CTTAAG 1 cut(s) 403
BspTNI GGTCTC 2 cut(s) 1349, 3491
BsrBI CCGCTC 1 cut(s) 1965
BsrDI GCAATG 5 cut(s) 498, 1383, 1481, 1667, 3171
BsrI ACTGG 9 cut(s) 600, 733, 738, 917, 1829, 2062, 2418, 2949, 3446
BssECI CCNNGG 9 cut(s) 525, 1279, 1466, 3147, 3148, 3333, 3556, 3568, 3569
BssNAI GTATAC 2 cut(s) 1928, 3193
BssNI GRCGYC 3 cut(s) 8, 24, 2037
BssSI CACGAG 3 cut(s) 1107, 2240, 2876
BssT1I CCWWGG 3 cut(s) 525, 1466, 3556
Bst1107I GTATAC 2 cut(s) 1928, 3193
Bst2BI CACGAG 3 cut(s) 1107, 2240, 2876
Bst2UI CCWGG 9 cut(s) 982, 1163, 1281, 1980, 2310, 2665, 3149, 3335, 3570
Bst6I CTCTTC 3 cut(s) 1352, 2208, 2754
BstACI GRCGYC 3 cut(s) 8, 24, 2037
BstAFI CTTAAG 1 cut(s) 403
BstAPI GCANNNNNTGC 1 cut(s) 1367
BstBAI YACGTR 1 cut(s) 880
BstBI TTCGAA 1 cut(s) 926
BstC8I GCNNGC 5 cut(s) 44, 574, 1099, 1130, 2585
BstDEI CTNAG 6 cut(s) 831, 906, 1718, 2285, 2849, 3461
BstDSI CCRYGG 1 cut(s) 1466
BstEII GGTNACC 1 cut(s) 2677
BstENI CCTNNNNNAGG 1 cut(s) 2213
BstF5I GGATG 8 cut(s) 330, 721, 1006, 2401, 2673, 2968, 3408, 3579
BstFNI CGCG 2 cut(s) 42, 1515
BstHHI GCGC 1 cut(s) 1517
BstMAI GTCTC 4 cut(s) 827, 1349, 2225, 3491
BstMWI GCNNNNNNNGC 9 cut(s) 1283, 1367, 1471, 2126, 2319, 2426, 2584, 3140, 3350
BstNI CCWGG 9 cut(s) 982, 1163, 1281, 1980, 2310, 2665, 3149, 3335, 3570
BstNSI RCATGY 3 cut(s) 1101, 1191, 2294
BstPI GGTNACC 1 cut(s) 2677
BstSFI CTRYAG 3 cut(s) 672, 798, 1770
BstSLI GKGCMC 2 cut(s) 1329, 3530
BstUI CGCG 2 cut(s) 42, 1515
BstV2I GAAGAC 2 cut(s) 1031, 2718
BstX2I RGATCY 2 cut(s) 622, 3162
BstXI CCANNNNNNTGG 3 cut(s) 2032, 2664, 3453
BstYI RGATCY 2 cut(s) 622, 3162
BstZ17I GTATAC 2 cut(s) 1928, 3193
BsuI GTATCC 1 cut(s) 2057
BsuRI GGCC 9 cut(s) 306, 435, 619, 1481, 1697, 2583, 3146, 3153, 3567
BtgI CCRYGG 1 cut(s) 1466
BtgZI GCGATG 1 cut(s) 2921
BtsCI GGATG 8 cut(s) 330, 721, 1006, 2401, 2673, 2968, 3408, 3579
BtsIMutI CAGTG 3 cut(s) 69, 1692, 1740
BveI ACCTGC 3 cut(s) 832, 1166, 3523
Cac8I GCNNGC 5 cut(s) 44, 574, 1099, 1130, 2585
CaiI CAGNNNCTG 1 cut(s) 3593
CciI TCATGA 2 cut(s) 372, 3213
CfoI GCGC 1 cut(s) 1517
Cfr13I GGNCC 8 cut(s) 341, 692, 1155, 1479, 3145, 3151, 3512, 3566
CseI GACGC 1 cut(s) 2426
CsiI ACCWGGT 1 cut(s) 1978
DdeI CTNAG 6 cut(s) 831, 906, 1718, 2285, 2849, 3461
EaeI YGGCCR 1 cut(s) 433
Eam1104I CTCTTC 3 cut(s) 1352, 2208, 2754
EarI CTCTTC 3 cut(s) 1352, 2208, 2754
Ecl136II GAGCTC 2 cut(s) 46, 3014
Eco130I CCWWGG 3 cut(s) 525, 1466, 3556
Eco24I GRGCYC 3 cut(s) 48, 2951, 3016
Eco31I GGTCTC 2 cut(s) 1349, 3491
Eco32I GATATC 1 cut(s) 2088
Eco47I GGWCC 4 cut(s) 341, 692, 1155, 3512
Eco53kI GAGCTC 2 cut(s) 46, 3014
Eco57I CTGAAG 1 cut(s) 3042
Eco72I CACGTG 1 cut(s) 880
Eco88I CYCGRG 1 cut(s) 2098
Eco91I GGTNACC 1 cut(s) 2677
EcoICRI GAGCTC 2 cut(s) 46, 3014
EcoNI CCTNNNNNAGG 1 cut(s) 2213
EcoO109I RGGNCCY 3 cut(s) 341, 1155, 3151
EcoO65I GGTNACC 1 cut(s) 2677
EcoRI GAATTC 1 cut(s) 2734
EcoRII CCWGG 9 cut(s) 980, 1161, 1279, 1978, 2308, 2663, 3147, 3333, 3568
EcoRV GATATC 1 cut(s) 2088
EcoT14I CCWWGG 3 cut(s) 525, 1466, 3556
EcoT22I ATGCAT 2 cut(s) 1396, 1669
EcoT38I GRGCYC 3 cut(s) 48, 2951, 3016
ErhI CCWWGG 3 cut(s) 525, 1466, 3556
FalI AAGNNNNNCTT 6 cut(s) 313, 345, 3515, 3547, 3540, 3572
FaqI GGGAC 2 cut(s) 2993, 3380
FauI CCCGC 1 cut(s) 2639
FauNDI CATATG 1 cut(s) 1504
FbaI TGATCA 3 cut(s) 1122, 3201, 3261
FblI GTMKAC 2 cut(s) 1927, 3192
FokI GGATG 8 cut(s) 337, 728, 1013, 2408, 2680, 2975, 3395, 3586
FriOI GRGCYC 3 cut(s) 48, 2951, 3016
GlaI GCGC 1 cut(s) 1516
GsaI CCCAGC 1 cut(s) 1290
GsuI CTGGAG 3 cut(s) 617, 1836, 2693
HaeIII GGCC 9 cut(s) 306, 435, 619, 1481, 1697, 2583, 3146, 3153, 3567
HapII CCGG 6 cut(s) 28, 102, 318, 620, 1351, 3413
HgaI GACGC 1 cut(s) 2426
HhaI GCGC 1 cut(s) 1517
Hin1I GRCGYC 3 cut(s) 8, 24, 2037
Hin6I GCGC 1 cut(s) 1515
HinP1I GCGC 1 cut(s) 1515
HindIII AAGCTT 1 cut(s) 440
HpaII CCGG 6 cut(s) 28, 102, 318, 620, 1351, 3413
HphI GGTGA 8 cut(s) 502, 689, 1485, 1634, 1968, 1972, 3211, 3500
Hpy166II GTNNAC 6 cut(s) 1327, 1897, 1928, 2696, 2894, 3193
Hpy8I GTNNAC 6 cut(s) 1327, 1897, 1928, 2696, 2894, 3193
Hpy99I CGWCG 4 cut(s) 13, 26, 176, 276
HpyCH4IV ACGT 9 cut(s) 24, 135, 174, 879, 887, 1703, 2037, 2110, 3612
HpyF10VI GCNNNNNNNGC 9 cut(s) 1283, 1367, 1471, 2126, 2319, 2426, 2584, 3140, 3350
HpyF3I CTNAG 6 cut(s) 831, 906, 1718, 2285, 2849, 3461
HpySE526I ACGT 9 cut(s) 24, 135, 174, 879, 887, 1703, 2037, 2110, 3612
Hsp92I GRCGYC 3 cut(s) 8, 24, 2037
HspAI GCGC 1 cut(s) 1515
Kpn2I TCCGGA 2 cut(s) 27, 1350
KpnI GGTACC 1 cut(s) 420
Ksp22I TGATCA 3 cut(s) 1122, 3201, 3261
LguI GCTCTTC 1 cut(s) 2208
LmnI GCTCC 7 cut(s) 598, 867, 1021, 1084, 1567, 2012, 3011
LweI GCATC 3 cut(s) 659, 1370, 2658
MabI ACCWGGT 1 cut(s) 1978
MaeII ACGT 9 cut(s) 24, 135, 174, 879, 887, 1703, 2037, 2110, 3612
MbiI CCGCTC 1 cut(s) 1965
MfeI CAATTG 2 cut(s) 1581, 1678
MflI RGATCY 2 cut(s) 622, 3162
MhlI GDGCHC 6 cut(s) 48, 864, 1329, 2951, 3016, 3530
MlsI TGGCCA 1 cut(s) 435
MluNI TGGCCA 1 cut(s) 435
MmeI TCCRAC 4 cut(s) 670, 1156, 2813, 3490
Mox20I TGGCCA 1 cut(s) 435
Mph1103I ATGCAT 2 cut(s) 1396, 1669
MroI TCCGGA 2 cut(s) 27, 1350
MroXI GAANNNNTTC 3 cut(s) 1295, 3121, 3377
MscI TGGCCA 1 cut(s) 435
MslI CAYNNNNRTG 3 cut(s) 2030, 2438, 3176
Msp20I TGGCCA 1 cut(s) 435
MspA1I CMGCKG 7 cut(s) 303, 586, 1406, 1814, 3113, 3143, 3341
MspCI CTTAAG 1 cut(s) 403
MspI CCGG 6 cut(s) 28, 102, 318, 620, 1351, 3413
MunI CAATTG 2 cut(s) 1581, 1678
MvaI CCWGG 9 cut(s) 982, 1163, 1281, 1980, 2310, 2665, 3149, 3335, 3570
MvnI CGCG 2 cut(s) 42, 1515
MwoI GCNNNNNNNGC 9 cut(s) 1283, 1367, 1471, 2126, 2319, 2426, 2584, 3140, 3350
NciI CCSGG 2 cut(s) 318, 3413
NcoI CCATGG 1 cut(s) 1466
NdeI CATATG 1 cut(s) 1504
NlaIV GGNNCC 5 cut(s) 32, 343, 418, 624, 3529
NmeAIII GCCGAG 1 cut(s) 2930
NmuCI GTSAC 5 cut(s) 875, 1183, 1687, 1917, 3316
NsiI ATGCAT 2 cut(s) 1396, 1669
NspI RCATGY 3 cut(s) 1101, 1191, 2294
NspV TTCGAA 1 cut(s) 926
PaeI GCATGC 1 cut(s) 1101
PagI TCATGA 2 cut(s) 372, 3213
PasI CCCWGGG 2 cut(s) 3148, 3569
PciSI GCTCTTC 1 cut(s) 2208
PcsI WCGNNNNNNNCGW 2 cut(s) 72, 2247
PdmI GAANNNNTTC 3 cut(s) 1295, 3121, 3377
PfeI GAWTC 7 cut(s) 1437, 1934, 2628, 2638, 2703, 2872, 3373
PflFI GACNNNGTC 1 cut(s) 1795
PflMI CCANNNNNTGG 1 cut(s) 353
PmaCI CACGTG 1 cut(s) 880
PmlI CACGTG 1 cut(s) 880
Ppu21I YACGTR 1 cut(s) 880
PpuMI RGGWCCY 2 cut(s) 341, 1155
PshBI ATTAAT 1 cut(s) 2622
Psp124BI GAGCTC 2 cut(s) 48, 3016
Psp5II RGGWCCY 2 cut(s) 341, 1155
Psp6I CCWGG 9 cut(s) 980, 1161, 1279, 1978, 2308, 2663, 3147, 3333, 3568
PspCI CACGTG 1 cut(s) 880
PspEI GGTNACC 1 cut(s) 2677
PspFI CCCAGC 1 cut(s) 1286
PspGI CCWGG 9 cut(s) 980, 1161, 1279, 1978, 2308, 2663, 3147, 3333, 3568
PspN4I GGNNCC 5 cut(s) 32, 343, 418, 624, 3529
PspPI GGNCC 8 cut(s) 341, 692, 1155, 1479, 3145, 3151, 3512, 3566
PspPPI RGGWCCY 2 cut(s) 341, 1155
PsrI GAACNNNNNNTAC 2 cut(s) 1596, 1628
PstI CTGCAG 1 cut(s) 1774
PstNI CAGNNNCTG 1 cut(s) 3593
PsuI RGATCY 2 cut(s) 622, 3162
PsyI GACNNNGTC 1 cut(s) 1795
PvuII CAGCTG 5 cut(s) 586, 1406, 1814, 3113, 3341
RseI CAYNNNNRTG 3 cut(s) 2030, 2438, 3176
SacI GAGCTC 2 cut(s) 48, 3016
SapI GCTCTTC 1 cut(s) 2208
Sau96I GGNCC 8 cut(s) 341, 692, 1155, 1479, 3145, 3151, 3512, 3566
ScaI AGTACT 3 cut(s) 804, 911, 2782
SduI GDGCHC 6 cut(s) 48, 864, 1329, 2951, 3016, 3530
SexAI ACCWGGT 1 cut(s) 1978
SfaNI GCATC 3 cut(s) 659, 1370, 2658
SfcI CTRYAG 3 cut(s) 672, 798, 1770
SfuI TTCGAA 1 cut(s) 926
SinI GGWCC 4 cut(s) 341, 692, 1155, 3512
SmiMI CAYNNNNRTG 3 cut(s) 2030, 2438, 3176
SmlI CTYRAG 3 cut(s) 53, 403, 2163
SmoI CTYRAG 3 cut(s) 53, 403, 2163
SpeI ACTAGT 2 cut(s) 245, 2266
SphI GCATGC 1 cut(s) 1101
SsiI CCGC 7 cut(s) 5, 40, 303, 1965, 2646, 3143, 3305
SstI GAGCTC 2 cut(s) 48, 3016
StyI CCWWGG 3 cut(s) 525, 1466, 3556
TaiI ACGT 9 cut(s) 27, 138, 177, 882, 890, 1706, 2040, 2113, 3615
TatI WGTACW 4 cut(s) 802, 909, 2745, 2780
TauI GCSGC 4 cut(s) 8, 306, 3146, 3308
TfiI GAWTC 7 cut(s) 1437, 1934, 2628, 2638, 2703, 2872, 3373
TscAI CASTG 3 cut(s) 76, 1692, 1740
TseFI GTSAC 5 cut(s) 875, 1183, 1687, 1917, 3316
Tsp45I GTSAC 5 cut(s) 875, 1183, 1687, 1917, 3316
TspGWI ACGGA 1 cut(s) 1289
TspRI CASTG 3 cut(s) 76, 1692, 1740
Tth111I GACNNNGTC 1 cut(s) 1795
Van91I CCANNNNNTGG 1 cut(s) 353
Vha464I CTTAAG 1 cut(s) 403
VneI GTGCAC 1 cut(s) 1325
VpaK11BI GGWCC 4 cut(s) 341, 692, 1155, 3512
VspI ATTAAT 1 cut(s) 2622
XagI CCTNNNNNAGG 1 cut(s) 2213
XapI RAATTY 7 cut(s) 775, 1292, 1532, 2734, 3220, 3242, 3647
XceI RCATGY 3 cut(s) 1101, 1191, 2294
XcmI CCANNNNNNNNNTGG 2 cut(s) 1473, 2410
XmiI GTMKAC 2 cut(s) 1927, 3192
XmnI GAANNNNTTC 3 cut(s) 1295, 3121, 3377
ZraI GACGTC 2 cut(s) 25, 2038
ZrmI AGTACT 3 cut(s) 804, 911, 2782
Zsp2I ATGCAT 2 cut(s) 1396, 1669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.