AT2G30990

Protein of unknown function (DUF688)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
13187407 .. 13190458
3052 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G30990.5

Sequence Viewer

Length: 1782 bp
ATGTTAATGGGGAGCTTAATGATGGAAGAGAAGCAACTGGATTTCAACCGTCCGCTTATATCCATTAGACGGCCTACACAAACTTCAGAATCTGAGAGCAAAACAAGATCTTTTGATTCAGTAACCAACATGATTCCTCCTTCTCCACCAGTTTACAAGTCTGATATCAAGTCAGGTCCTGTGAGAAATCCAGGAACTGTTCCTTTTCAATGGGAACATAAGCCTGGAAAGCCAAAAGACGAAAGGAAACCGGTTTTGCAAAGTTTTGTAGAGCCACATTTTGTGCCAAAGCTTCCTCCTGGTAGAGAGCGAGTAGTAGAGTTAGGGAGGAAACCTGAAAGTACTGGAGCTGATCACCAGACCAAAACTGTATCGTCTTCGGATAAATATCTTGTGGAGGATGCAAAGAGTAATAGTTCTCGGTATGATGATGATGATGATGATAGTGATGGTACTTATCTTGATGCAACTGATACACTTTCAAGAACTGAGTCATTCTTCTTTAACTGTAGTGCTGTTAGTGGTGCGAGTGGTTTGGATGGTTCAGGGATACTAGTAGAGCCATTTGGAACTTTATCGACTGATCGACAAACTCAGGATCTAATGATGGGGAGATTCTTGCCTGCAGCTAAAGCTTTGACTTCAGAATCACCTCCACATCTTGCTAGGAAACCACCTAAACCAGAAGAACCGGTGAAGCAGTTGATGAAGAAGAAACAGAACAAAGTGGAGCAAAATCCGTATCGGTTTCGTCATTCGCCTGATCAAGAAGAGGAAGATGGAAATATAAGCAGCATGATGGCGTCTGGTGTTTGTGGATTACTCCCTCAACTCTGCTTGAGAAGCTCTTTGGGACTATTGAATCCGGTTCCATCTGTGAGAATGCAGCAACAAAGAGCTGTTTCTGTTCGTCGTATGCGGTCTAAGTACCAAGATTCTGCACCTTCTAATGAAACTCATAACAAGCAAAATGAAGATAAGAGGAAGTTGAAGCTAATTGAATCAGTTGCAAAAGGGTCTTCTCAAGGTGAGTCATTATCAGTATCTTCTATACCACAAGGAAAAGAGAAACTCGAGAACGTTGGCACCGCTTCACGCAGTAAAATCAGTAAAAACTTTGGTGAGCTCTTGGCTAGTGATGAGAATACATGGGAACCTTCATCCGAGACTCCTGTGGCAGAGAAAACTCTGTATGTAGACATTGTGCATCTAGTAGATAAGAAGGTACAAGAAGAGTCCAAGAAGCAGCCTATATTGAAAGAGTCTCCTTCACTAGACATTGTTCCTGTAAAAGATGAAGAAGCTGATATCTCGCAGCCTAAAAGCATTGAGCAAGAGAATGGTAACAGAGATGAGGATTTCACTAAATTCTCAAGTCAGAAAGTTGAAGAATGTCCTGATCATCAAGCTATTGTTGCACTGCCAGAATCCGATGTGGTAGAGATTACAAAGGAGAAGAAGATTGATCTTGAAGTTCAGTTGCAAGTAATCACAACAAATATTGAAAGTTCAAGGCTTCATCATCGTTCAAGTTATCTCATTGTTCCTCCACCACCATTACCAAAAGCTCCTTCAGATTCTTGGTTAAAGCGTACATTACCAACAATACCACCAAAAAACAACTCATTCGCATGGTTACAGTCTCTTGGCACTGATGATGATAATCACTTTACCAAGACTCAAGCTAATCCAAAGTGGGAAACTATGGTCAAAACGTCCAATACACAGCAAGGGTTTGTGTGCTTCTCCAAGGAAACACTAAACCCTATACCAGAGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

593

Amino Acids

66.23

Weight (kDa)

5.91

Isoelectric Point (pI)

60.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF688 PF05097 8 - 350 3.1e-121 Protein of unknown function (DUF688)
DUF688 PF05097 355 - 421 6.4e-13 Protein of unknown function (DUF688)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1085
AccI GTMKAC 1 cut(s) 1197
AciI CCGC 3 cut(s) 53, 919, 1089
AclI AACGTT 1 cut(s) 1080
AclWI GGATC 1 cut(s) 606
AcsI RAATTY 1 cut(s) 1367
AcuI CTGAAG 3 cut(s) 69, 627, 1557
AcyI GRCGYC 1 cut(s) 803
AfaI GTAC 5 cut(s) 343, 454, 929, 1227, 1594
AfiI CCNNNNNNNGG 1 cut(s) 69
AgeI ACCGGT 2 cut(s) 250, 691
AhlI ACTAGT 1 cut(s) 553
AjnI CCWGG 3 cut(s) 190, 223, 298
AjuI GAANNNNNNNTTGG 2 cut(s) 1555, 1587
Alw21I GWGCWC 1 cut(s) 1128
Alw26I GTCTC 3 cut(s) 1160, 1269, 1647
AlwI GGATC 1 cut(s) 606
AlwNI CAGNNNCTG 3 cut(s) 92, 179, 197
Ama87I CYCGRG 1 cut(s) 1073
AoxI GGCC 1 cut(s) 71
ApeKI GCWGC 5 cut(s) 626, 792, 886, 1246, 1315
ApoI RAATTY 1 cut(s) 1367
AsiGI ACCGGT 2 cut(s) 250, 691
AspS9I GGNCC 1 cut(s) 176
AsuHPI GGTGA 5 cut(s) 347, 642, 706, 1040, 1133
AvaI CYCGRG 1 cut(s) 1073
AvaII GGWCC 1 cut(s) 176
BanI GGYRCC 1 cut(s) 1085
BanII GRGCYC 1 cut(s) 1128
BbsI GAAGAC 2 cut(s) 369, 1011
Bbv12I GWGCWC 1 cut(s) 1128
BbvI GCAGC 5 cut(s) 638, 804, 898, 1258, 1327
BccI CCATC 7 cut(s) 16, 443, 533, 601, 773, 793, 880
BceAI ACGGC 1 cut(s) 86
BciT130I CCWGG 3 cut(s) 192, 225, 300
BciVI GTATCC 1 cut(s) 543
BclI TGATCA 3 cut(s) 352, 763, 1399
BcoDI GTCTC 3 cut(s) 1160, 1269, 1647
BcuI ACTAGT 1 cut(s) 553
BfaI CTAG 5 cut(s) 554, 666, 1134, 1211, 1274
BfmI CTRYAG 2 cut(s) 508, 624
BfuI GTATCC 1 cut(s) 543
BglII AGATCT 1 cut(s) 107
BisI GCNGC 5 cut(s) 627, 793, 887, 1247, 1316
BlsI GCNGC 5 cut(s) 628, 794, 888, 1248, 1317
BmcAI AGTACT 1 cut(s) 343
Bme1390I CCNGG 3 cut(s) 192, 225, 300
Bme18I GGWCC 1 cut(s) 176
BmeT110I CYCGRG 1 cut(s) 1073
BmgT120I GGNCC 1 cut(s) 176
BmiI GGNNCC 3 cut(s) 870, 1087, 1155
BmrFI CCNGG 3 cut(s) 192, 225, 300
BmsI GCATC 3 cut(s) 391, 454, 1216
BpiI GAAGAC 2 cut(s) 369, 1011
BpmI CTGGAG 1 cut(s) 366
BpuEI CTTGAG 4 cut(s) 859, 1008, 1357, 1665
BsaBI GATNNNNATC 2 cut(s) 387, 1662
BsaHI GRCGYC 1 cut(s) 803
BsaJI CCNNGG 1 cut(s) 1749
BsaWI WCCGGW 3 cut(s) 250, 691, 865
Bsc4I CCNNNNNNNGG 1 cut(s) 69
Bse118I RCCGGY 2 cut(s) 250, 691
Bse1I ACTGG 3 cut(s) 42, 149, 349
Bse8I GATNNNNATC 2 cut(s) 387, 1662
BseBI CCWGG 3 cut(s) 192, 225, 300
BseDI CCNNGG 1 cut(s) 1749
BseGI GGATG 3 cut(s) 406, 544, 1160
BseJI GATNNNNATC 2 cut(s) 387, 1662
BseLI CCNNNNNNNGG 1 cut(s) 69
BseMII CTCAG 3 cut(s) 84, 480, 608
BseNI ACTGG 3 cut(s) 42, 149, 349
BseXI GCAGC 5 cut(s) 638, 804, 898, 1258, 1327
BsgI GTGCAG 1 cut(s) 924
BshFI GGCC 1 cut(s) 73
BshNI GGYRCC 1 cut(s) 1085
BshTI ACCGGT 2 cut(s) 250, 691
BsiHKAI GWGCWC 1 cut(s) 1128
BsiHKCI CYCGRG 1 cut(s) 1073
BsiSI CCGG 3 cut(s) 251, 692, 866
BslFI GGGAC 1 cut(s) 867
BslI CCNNNNNNNGG 1 cut(s) 69
BsmAI GTCTC 3 cut(s) 1160, 1269, 1647
BsmFI GGGAC 1 cut(s) 867
BsmI GAATGC 1 cut(s) 888
BsnI GGCC 1 cut(s) 73
BsoBI CYCGRG 1 cut(s) 1073
Bsp1286I GDGCHC 1 cut(s) 1128
Bsp143I GATC 7 cut(s) 107, 352, 583, 598, 763, 1399, 1465
BspACI CCGC 3 cut(s) 53, 919, 1089
BspANI GGCC 1 cut(s) 73
BspCNI CTCAG 3 cut(s) 85, 481, 607
BspLI GGNNCC 3 cut(s) 870, 1087, 1155
BspMAI CTGCAG 1 cut(s) 628
BspPI GGATC 1 cut(s) 606
BspT107I GGYRCC 1 cut(s) 1085
BsrFI RCCGGY 2 cut(s) 250, 691
BsrI ACTGG 3 cut(s) 42, 149, 349
BssAI RCCGGY 2 cut(s) 250, 691
BssECI CCNNGG 1 cut(s) 1749
BssMI GATC 7 cut(s) 107, 352, 583, 598, 763, 1399, 1465
BssNI GRCGYC 1 cut(s) 803
BssT1I CCWWGG 1 cut(s) 1749
Bst2UI CCWGG 3 cut(s) 192, 225, 300
Bst4CI ACNGT 5 cut(s) 50, 199, 370, 509, 1641
Bst6I CTCTTC 3 cut(s) 21, 765, 1227
BstACI GRCGYC 1 cut(s) 803
BstC8I GCNNGC 1 cut(s) 624
BstDEI CTNAG 4 cut(s) 93, 489, 594, 924
BstF5I GGATG 3 cut(s) 406, 544, 1160
BstKTI GATC 7 cut(s) 110, 355, 586, 601, 766, 1402, 1468
BstMAI GTCTC 3 cut(s) 1160, 1269, 1647
BstMBI GATC 7 cut(s) 107, 352, 583, 598, 763, 1399, 1465
BstMWI GCNNNNNNNGC 4 cut(s) 229, 632, 843, 1415
BstNI CCWGG 3 cut(s) 192, 225, 300
BstSCI CCNGG 3 cut(s) 190, 223, 298
BstSFI CTRYAG 2 cut(s) 508, 624
BstV1I GCAGC 5 cut(s) 638, 804, 898, 1258, 1327
BstV2I GAAGAC 2 cut(s) 369, 1011
BstX2I RGATCY 2 cut(s) 107, 598
BstYI RGATCY 2 cut(s) 107, 598
BsuI GTATCC 1 cut(s) 543
BsuRI GGCC 1 cut(s) 73
BtsCI GGATG 3 cut(s) 406, 544, 1160
BtsI GCAGTG 1 cut(s) 1418
BtsIMutI CAGTG 2 cut(s) 1418, 1650
Cac8I GCNNGC 1 cut(s) 624
CaiI CAGNNNCTG 3 cut(s) 92, 179, 197
Cfr10I RCCGGY 2 cut(s) 250, 691
Cfr13I GGNCC 1 cut(s) 176
CseI GACGC 1 cut(s) 792
Csp6I GTAC 5 cut(s) 342, 453, 928, 1226, 1593
CspAI ACCGGT 2 cut(s) 250, 691
CviAII CATG 4 cut(s) 130, 796, 1149, 1632
CviQI GTAC 5 cut(s) 342, 453, 928, 1226, 1593
DdeI CTNAG 4 cut(s) 93, 489, 594, 924
DpnI GATC 7 cut(s) 109, 354, 585, 600, 765, 1401, 1467
DpnII GATC 7 cut(s) 107, 352, 583, 598, 763, 1399, 1465
Eam1104I CTCTTC 3 cut(s) 21, 765, 1227
EarI CTCTTC 3 cut(s) 21, 765, 1227
Ecl136II GAGCTC 1 cut(s) 1126
Eco130I CCWWGG 1 cut(s) 1749
Eco24I GRGCYC 1 cut(s) 1128
Eco32I GATATC 2 cut(s) 166, 1309
Eco47I GGWCC 1 cut(s) 176
Eco53kI GAGCTC 1 cut(s) 1126
Eco57I CTGAAG 3 cut(s) 69, 627, 1557
Eco88I CYCGRG 1 cut(s) 1073
EcoICRI GAGCTC 1 cut(s) 1126
EcoO109I RGGNCCY 1 cut(s) 176
EcoRII CCWGG 3 cut(s) 190, 223, 298
EcoRV GATATC 2 cut(s) 166, 1309
EcoT14I CCWWGG 1 cut(s) 1749
EcoT38I GRGCYC 1 cut(s) 1128
ErhI CCWWGG 1 cut(s) 1749
FaeI CATG 4 cut(s) 133, 799, 1152, 1635
FaqI GGGAC 1 cut(s) 867
FatI CATG 4 cut(s) 129, 795, 1148, 1631
FbaI TGATCA 3 cut(s) 352, 763, 1399
FblI GTMKAC 1 cut(s) 1197
Fnu4HI GCNGC 5 cut(s) 627, 793, 887, 1247, 1316
FokI GGATG 3 cut(s) 413, 551, 1147
FriOI GRGCYC 1 cut(s) 1128
Fsp4HI GCNGC 5 cut(s) 627, 793, 887, 1247, 1316
FspBI CTAG 5 cut(s) 554, 666, 1134, 1211, 1274
GluI GCNGC 5 cut(s) 627, 793, 887, 1247, 1316
GsuI CTGGAG 1 cut(s) 366
HaeIII GGCC 1 cut(s) 73
HapII CCGG 3 cut(s) 251, 692, 866
HgaI GACGC 1 cut(s) 792
Hin1I GRCGYC 1 cut(s) 803
Hin1II CATG 4 cut(s) 133, 799, 1152, 1635
HindIII AAGCTT 2 cut(s) 290, 633
HpaII CCGG 3 cut(s) 251, 692, 866
HphI GGTGA 5 cut(s) 347, 642, 706, 1040, 1133
Hpy166II GTNNAC 2 cut(s) 154, 1198
Hpy188I TCNGA 9 cut(s) 88, 94, 163, 382, 646, 1165, 1380, 1432, 1576
Hpy188III TCNNGA 7 cut(s) 461, 483, 596, 767, 1075, 1397, 1469
Hpy8I GTNNAC 2 cut(s) 154, 1198
Hpy99I CGWCG 1 cut(s) 915
HpyAV CCTTC 6 cut(s) 150, 954, 1167, 1216, 1278, 1581
HpyCH4III ACNGT 5 cut(s) 50, 199, 370, 509, 1641
HpyCH4IV ACGT 2 cut(s) 1080, 1715
HpyF10VI GCNNNNNNNGC 4 cut(s) 229, 632, 843, 1415
HpyF3I CTNAG 4 cut(s) 93, 489, 594, 924
HpySE526I ACGT 2 cut(s) 1080, 1715
Hsp92I GRCGYC 1 cut(s) 803
Hsp92II CATG 4 cut(s) 133, 799, 1152, 1635
Ksp22I TGATCA 3 cut(s) 352, 763, 1399
Kzo9I GATC 7 cut(s) 107, 352, 583, 598, 763, 1399, 1465
LmnI GCTCC 4 cut(s) 12, 347, 730, 1573
Lsp1109I GCAGC 5 cut(s) 638, 804, 898, 1258, 1327
LweI GCATC 3 cut(s) 391, 454, 1216
MaeI CTAG 5 cut(s) 554, 666, 1134, 1211, 1274
MaeII ACGT 2 cut(s) 1080, 1715
MaeIII GTNAC 3 cut(s) 121, 1343, 1635
MalI GATC 7 cut(s) 109, 354, 585, 600, 765, 1401, 1467
MboI GATC 7 cut(s) 107, 352, 583, 598, 763, 1399, 1465
MflI RGATCY 2 cut(s) 107, 598
MhlI GDGCHC 1 cut(s) 1128
MluCI AATT 2 cut(s) 996, 1367
MlyI GAGTC 6 cut(s) 500, 1040, 1162, 1244, 1271, 1672
MseI TTAA 4 cut(s) 5, 17, 504, 1586
MslI CAYNNNNRTG 1 cut(s) 1630
MspI CCGG 3 cut(s) 251, 692, 866
MspR9I CCNGG 3 cut(s) 192, 225, 300
Mva1269I GAATGC 1 cut(s) 888
MvaI CCWGG 3 cut(s) 192, 225, 300
MwoI GCNNNNNNNGC 4 cut(s) 229, 632, 843, 1415
NdeII GATC 7 cut(s) 107, 352, 583, 598, 763, 1399, 1465
NlaIII CATG 4 cut(s) 133, 799, 1152, 1635
NlaIV GGNNCC 3 cut(s) 870, 1087, 1155
PaeR7I CTCGAG 1 cut(s) 1073
PctI GAATGC 1 cut(s) 888
PfoI TCCNGGA 1 cut(s) 190
PinAI ACCGGT 2 cut(s) 250, 691
PkrI GCNGC 5 cut(s) 628, 794, 888, 1248, 1317
PleI GAGTC 6 cut(s) 499, 1039, 1162, 1243, 1270, 1672
PpsI GAGTC 6 cut(s) 499, 1039, 1162, 1243, 1270, 1672
PpuMI RGGWCCY 1 cut(s) 176
Psp124BI GAGCTC 1 cut(s) 1128
Psp1406I AACGTT 1 cut(s) 1080
Psp5II RGGWCCY 1 cut(s) 176
Psp6I CCWGG 3 cut(s) 190, 223, 298
PspGI CCWGG 3 cut(s) 190, 223, 298
PspN4I GGNNCC 3 cut(s) 870, 1087, 1155
PspPI GGNCC 1 cut(s) 176
PspPPI RGGWCCY 1 cut(s) 176
PstI CTGCAG 1 cut(s) 628
PstNI CAGNNNCTG 3 cut(s) 92, 179, 197
PsuI RGATCY 2 cut(s) 107, 598
RsaI GTAC 5 cut(s) 343, 454, 929, 1227, 1594
RsaNI GTAC 5 cut(s) 342, 453, 928, 1226, 1593
RseI CAYNNNNRTG 1 cut(s) 1630
SacI GAGCTC 1 cut(s) 1128
SaqAI TTAA 4 cut(s) 5, 17, 504, 1586
SatI GCNGC 5 cut(s) 627, 793, 887, 1247, 1316
Sau3AI GATC 7 cut(s) 107, 352, 583, 598, 763, 1399, 1465
Sau96I GGNCC 1 cut(s) 176
ScaI AGTACT 1 cut(s) 343
SchI GAGTC 6 cut(s) 500, 1040, 1162, 1244, 1271, 1672
ScrFI CCNGG 3 cut(s) 192, 225, 300
SduI GDGCHC 1 cut(s) 1128
SfaNI GCATC 3 cut(s) 391, 454, 1216
SfcI CTRYAG 2 cut(s) 508, 624
Sfr274I CTCGAG 1 cut(s) 1073
SinI GGWCC 1 cut(s) 176
SlaI CTCGAG 1 cut(s) 1073
SmiMI CAYNNNNRTG 1 cut(s) 1630
SmlI CTYRAG 5 cut(s) 838, 1023, 1073, 1372, 1680
SmoI CTYRAG 5 cut(s) 838, 1023, 1073, 1372, 1680
SpeI ACTAGT 1 cut(s) 553
Sse9I AATT 2 cut(s) 996, 1367
SsiI CCGC 3 cut(s) 53, 919, 1089
SspI AATATT 1 cut(s) 1501
SspMI CTAG 5 cut(s) 554, 666, 1134, 1211, 1274
SstI GAGCTC 1 cut(s) 1128
StyD4I CCNGG 3 cut(s) 190, 223, 298
StyI CCWWGG 1 cut(s) 1749
TaaI ACNGT 5 cut(s) 50, 199, 370, 509, 1641
TaiI ACGT 2 cut(s) 1083, 1718
TaqI TCGA 3 cut(s) 578, 586, 1074
TasI AATT 2 cut(s) 996, 1367
TatI WGTACW 1 cut(s) 341
Tru1I TTAA 4 cut(s) 5, 17, 504, 1586
Tru9I TTAA 4 cut(s) 5, 17, 504, 1586
TscAI CASTG 2 cut(s) 1425, 1657
TseI GCWGC 5 cut(s) 626, 792, 886, 1246, 1315
TspDTI ATGAA 6 cut(s) 722, 966, 987, 1149, 1311, 1508
TspGWI ACGGA 1 cut(s) 729
TspRI CASTG 2 cut(s) 1425, 1657
VpaK11BI GGWCC 1 cut(s) 176
XapI RAATTY 1 cut(s) 1367
XhoI CTCGAG 1 cut(s) 1073
XmiI GTMKAC 1 cut(s) 1197
XspI CTAG 5 cut(s) 554, 666, 1134, 1211, 1274
ZrmI AGTACT 1 cut(s) 343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.