Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0002485

Physical Location & Seq

Genomic Coordinates Reverse (-)

15378185 .. 15380666

Gene Structure 2482 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g15510.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGCTAAAGAATATGATGGAAGAGAAGCAGTTAGATCTTAATCAGCCACTTCTGTCTGTAAGACGATATTCACCTACAGTAGTCTCCTCAGAAGCTGATGACAAAAGGAAGGCTGATAAGTCACTACCCAAGCTACTTCCTCTTCCCTTTTACAAATCAGAATTGAAATCAGGTCCAGTGAGGCATCCAGGTACTGTTCCTTTTGTATGGGAGCAAATCCCCGGAAGACCCAAGGATGAAAGAAATTCACAAACTCAGGGTCTTGAACGGCCTGCCACTACACCAAGGCTTCCGCCTGGAAGGGTTTCAAATGCTAAGAAGCAAGCATTGGATAGAGGTTCTAAACGCACTACAGCTGCTCAATCCCCAACTGGAAATGTACTTTCCAATTCTAAAAATGATTCAACCTTTGATACAAAAGAAGTTACTAAGTGTGACAGCTCTAAAGAGGGGATGGAGGATAAGGATATTTCCGATTCAGAGGATGGTGATGAGACCTATGTAGATGCACTTGACGCACTTTCGAGGAGTGAATCATTCTATTATAACTGTAGTGTAAGTGGTTTGAGTGGACTGGATGGTCCAGATATCAAACCAACTGGAACCTTCTCGACAGATCCACAGACTCGTGATTTCATGATGGGTCGGTTCTTGCCTGCAGCAAAAGCAATGGCTTCAGACACACCTCAATATAGTACCAGGAAGCAACCAGTTGCTCGAGAGCAACCAATTTGTCAAGAGCAACCAAGAGGGATGAAGGTCGCCAGTTGGAATAAGCAACATCCACTTAATCAATACAAGCCAAATGATTTGCCACATAATGATATAACTGGGGACAAAAGTGAGAATGAAGGTATGAGAGTGCAAGCGCAATTGCCCATTTCTTCAGTTAGGAGTGTGCGAGCTAAATCTTCCTCTGCCAGTGCTTACAGAGAAGCTAAAAATGAGCATTCTTGGGGCGATGCTTGTGAACAAAGATTAGTGAATGGACATCAGGAAGCTGTGATACCTAAAGATAAGAATGATTTGAAATTTGAATCCAACCAGATCACCAAAATAAGTGAATGTGAGAAATTAGATGGGTCACCTGTACATAGGCGTCAGCAGGGTAGTAACATATCACCCTACCGAAAGGAATGTTTTCATCATGAAGAAAAAGGTTTTCTTGGTATTCCTGAAAAAGCAAAGAACTCCAGAGAAACTAGTAGCTCTGGAAAGTATCAAAAAGGCCACAACAATTTTAGGGAATTATTGGCTACTGAGAATATTGCTGAATGGGAAATGGGCCCAGGGAGTCCTGTAGTTGAGAAGACTCTGTATATTGATTCTGTGCATACTGTAAAATCTCCGAATTCAAATTCACATTCCTCAGATACAAAGGGCAATATGATTCAGTACAGAGGGAATGATAATGAAATTCCTGAGAAAAGTAATGAAGTGAAAGAAACCCCTTTGGCAGAGTTTTCATTCCAAGATATTGAGCACTTGGGTGATGGAAATGAGAAGGCTATAGTGCCGTTTCAAAGTTTGGAGTTTCCTGACTCCAGCTTTCTATATTGGTCTGGCAGATCCAATCAGGATGATCAAACAGATATGAGAAGTGGTTCCATATTGGATCAGGATTCCAGCAGATTTGCAAGCTTAAAAGTGGTTGACCAAGAAACAGTCAACTTGAAAAGCCAACATTTAGAGAAATCAGTTCACTGGAAAAATTGTAATGGCCTTACTCGGGACTGTATTACATCGACAACTGAAAAACTGAATGATGAGAAAAAGAGTGATTTAAAAGGCCAACAGTATAGAAAATCAGGAACAAAAGAAAGTTCGCATAGTCATGGTCAGAATTCTATTACATTGACCAGCTCAAAAGTGGCCTACAGGGGAAAGATTGATTTAGAAAGTCGACGACTTGTGAAATTTGGTAATCAGGAAAGTGCCCAGGGCCACAATTCACGACTGCCTCTTGGACCACCTTTACCGAAATCTCCATCAGAGTCTTGGTTAAAGCGCACCTTACCTAGTATTTCCTCGGGGAGCTTGTCTTCGCAGTATTCTTCTGGTTCACAGATTTATGCTAGCAGTCAGCCTTCGAAGACTTCCTCTCTTGATACCAAATGGGAGACAATTGTTAAAACTTCCAACACACACCATGGACATCGGCGGTTTTCAGAGGACCTTCTGACACCTATACCGGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF688

Protein Analysis

734

Amino Acids

81.77

Weight (kDa)

7.95

Isoelectric Point (pI)

47.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30990 AT2G30990 AT2G30990 AT2G30990 AT2G30990
fragaria_vesca	FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510
malus_domestica	MD09G1236600.v1.1 MD17G1266300.v1.1 MD17G1266400.v1.1
prunus_persica	Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1
pyrus_communis	pycom09g15510 pycom09g15520 pycom17g26590
rosa_chinensis	RchiOBHm_Chr2g0129801 RchiOBHm_Chr2g0129871 RchiOBHm_Chr7g0242591 RchiOBHm_Chr7g0242601
rosa_laevigata	RLG00000019104 RLG00000031611
rosa_multiflora	Rmu_sc0000650.1_g000026 Rmu_sc0007216.1_g000002
rosa_roxburghii	Rroxscaffold_2G00114300
rosa_rugosa	Rorug02G0289800 Rorug02G0289900 Rorug02G0290000 Rorug02G0290100 Rorug02G0290200
rosa_samantha	Rh2AG340700 Rh2AG341300 Rh2BG349100 Rh2CG328000 Rh2DG367400 Rh3CG154600 Rh3DG155700
rosa_wichuraiana	Rw2G027770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	546
AasI	GACNNNNNNGTC	1 cut(s)	579
AccI	GTMKAC	1 cut(s)	1903
AciI	CCGC	2 cut(s)	293, 2161
AclWI	GGATC	3 cut(s)	611, 1563, 1623
AcsI	RAATTY	7 cut(s)	244, 1031, 1351, 1357, 1416, 1843, 1916
AcuI	CTGAAG	2 cut(s)	660, 870
AcyI	GRCGYC	1 cut(s)	1099
AfaI	GTAC	5 cut(s)	193, 381, 697, 1092, 1397
AfiI	CCNNNNNNNGG	1 cut(s)	1729
AgsI	TTSAA	9 cut(s)	166, 266, 309, 405, 1030, 1037, 1356, 1523, 1675
AhlI	ACTAGT	1 cut(s)	1202
AjnI	CCWGG	5 cut(s)	187, 295, 698, 1288, 1938
AjuI	GAANNNNNNNTTGG	2 cut(s)	311, 343
AleI	CACNNNNGTG	1 cut(s)	1488
Alw21I	GWGCWC	1 cut(s)	1485
Alw26I	GTCTC	3 cut(s)	88, 488, 2114
AlwI	GGATC	3 cut(s)	611, 1563, 1623
AlwNI	CAGNNNCTG	2 cut(s)	95, 194
Ama87I	CYCGRG	3 cut(s)	717, 1728, 2029
AoxI	GGCC	7 cut(s)	269, 1228, 1285, 1720, 1789, 1872, 1942
ApaI	GGGCCC	1 cut(s)	1289
ApeKI	GCWGC	2 cut(s)	356, 659
ApoI	RAATTY	7 cut(s)	244, 1031, 1351, 1357, 1416, 1843, 1916
ArsI	GACNNNNNNTTYG	2 cut(s)	244, 276
Asp700I	GAANNNNTTC	3 cut(s)	304, 1140, 1603
AspLEI	GCGC	2 cut(s)	871, 2010
AspS9I	GGNCC	7 cut(s)	173, 581, 1285, 1286, 1942, 1967, 2173
AsuC2I	CCSGG	1 cut(s)	222
AsuHPI	GGTGA	6 cut(s)	63, 500, 1042, 1077, 1113, 1502
AsuII	TTCGAA	1 cut(s)	2090
AsuNHI	GCTAGC	1 cut(s)	2075
AvaI	CYCGRG	3 cut(s)	717, 1728, 2029
AvaII	GGWCC	4 cut(s)	173, 581, 1967, 2173
BaeGI	GKGCMC	2 cut(s)	1289, 1939
BanII	GRGCYC	1 cut(s)	1289
BarI	GAAGNNNNNNTAC	2 cut(s)	990, 1022
BauI	CACGAG	1 cut(s)	627
BbsI	GAAGAC	4 cut(s)	232, 1316, 2034, 2099
Bbv12I	GWGCWC	1 cut(s)	1485
BbvI	GCAGC	2 cut(s)	343, 671
BccI	CCATC	8 cut(s)	10, 448, 479, 572, 634, 1073, 1487, 1996
BceAI	ACGGC	2 cut(s)	284, 1501
BciT130I	CCWGG	5 cut(s)	189, 297, 700, 1290, 1940
BclI	TGATCA	1 cut(s)	1582
BcnI	CCSGG	1 cut(s)	222
BcoDI	GTCTC	3 cut(s)	88, 488, 2114
BcuI	ACTAGT	1 cut(s)	1202
BfaI	CTAG	3 cut(s)	1203, 2019, 2076
BfmI	CTRYAG	7 cut(s)	75, 351, 550, 657, 1299, 1509, 1876
BglII	AGATCT	1 cut(s)	34
BisI	GCNGC	2 cut(s)	357, 660
BlsI	GCNGC	2 cut(s)	358, 661
Bme1390I	CCNGG	6 cut(s)	189, 222, 297, 700, 1290, 1940
Bme18I	GGWCC	4 cut(s)	173, 581, 1967, 2173
BmeT110I	CYCGRG	3 cut(s)	717, 1728, 2029
BmgT120I	GGNCC	7 cut(s)	173, 581, 1285, 1286, 1942, 1967, 2173
BmiI	GGNNCC	3 cut(s)	604, 1287, 1606
BmrFI	CCNGG	6 cut(s)	189, 222, 297, 700, 1290, 1940
BmrI	ACTGGG	1 cut(s)	840
BmsI	GCATC	3 cut(s)	193, 496, 952
BmtI	GCTAGC	1 cut(s)	2079
BmuI	ACTGGG	1 cut(s)	840
BpiI	GAAGAC	4 cut(s)	232, 1316, 2034, 2099
BpmI	CTGGAG	2 cut(s)	1177, 1528
Bpu14I	TTCGAA	1 cut(s)	2090
BpuMI	CCSGG	1 cut(s)	222
BsaBI	GATNNNNATC	1 cut(s)	39
BsaHI	GRCGYC	1 cut(s)	1099
BsaI	GGTCTC	1 cut(s)	488
BsaJI	CCNNGG	9 cut(s)	220, 231, 284, 1288, 1289, 1938, 1939, 2028, 2149
BsaWI	WCCGGW	1 cut(s)	2191
Bsc4I	CCNNNNNNNGG	1 cut(s)	1729
Bse1I	ACTGG	9 cut(s)	176, 376, 579, 604, 710, 765, 835, 921, 1709
Bse3DI	GCAATG	1 cut(s)	675
Bse8I	GATNNNNATC	1 cut(s)	39
BseBI	CCWGG	5 cut(s)	189, 297, 700, 1290, 1940
BseDI	CCNNGG	9 cut(s)	220, 231, 284, 1288, 1289, 1938, 1939, 2028, 2149
BseGI	GGATG	8 cut(s)	184, 241, 459, 490, 583, 759, 781, 1585
BseJI	GATNNNNATC	1 cut(s)	39
BseLI	CCNNNNNNNGG	1 cut(s)	1729
BseMI	GCAATG	1 cut(s)	675
BseMII	CTCAG	5 cut(s)	102, 269, 1251, 1383, 1413
BseNI	ACTGG	9 cut(s)	176, 376, 579, 604, 710, 765, 835, 921, 1709
BseRI	GAGGAG	2 cut(s)	76, 541
BseSI	GKGCMC	2 cut(s)	1289, 1939
BseXI	GCAGC	2 cut(s)	343, 671
BshFI	GGCC	7 cut(s)	271, 1230, 1287, 1722, 1791, 1874, 1944
BsiHKAI	GWGCWC	1 cut(s)	1485
BsiHKCI	CYCGRG	3 cut(s)	717, 1728, 2029
BsiSI	CCGG	2 cut(s)	222, 2192
BslFI	GGGAC	2 cut(s)	848, 1745
BslI	CCNNNNNNNGG	1 cut(s)	1729
BsmAI	GTCTC	3 cut(s)	88, 488, 2114
BsmFI	GGGAC	2 cut(s)	848, 1745
BsmI	GAATGC	1 cut(s)	949
BsnI	GGCC	7 cut(s)	271, 1230, 1287, 1722, 1791, 1874, 1944
Bso31I	GGTCTC	1 cut(s)	488
BsoBI	CYCGRG	3 cut(s)	717, 1728, 2029
Bsp119I	TTCGAA	1 cut(s)	2090
Bsp120I	GGGCCC	1 cut(s)	1285
Bsp1286I	GDGCHC	3 cut(s)	1289, 1485, 1939
Bsp1407I	TGTACA	1 cut(s)	1090
Bsp143I	GATC	6 cut(s)	34, 616, 1047, 1568, 1582, 1615
Bsp19I	CCATGG	1 cut(s)	2149
BspACI	CCGC	2 cut(s)	293, 2161
BspANI	GGCC	7 cut(s)	271, 1230, 1287, 1722, 1791, 1874, 1944
BspCNI	CTCAG	5 cut(s)	101, 268, 1252, 1382, 1414
BspHI	TCATGA	2 cut(s)	636, 1147
BspLI	GGNNCC	3 cut(s)	604, 1287, 1606
BspMAI	CTGCAG	1 cut(s)	661
BspOI	GCTAGC	1 cut(s)	2079
BspPI	GGATC	3 cut(s)	611, 1563, 1623
BspT104I	TTCGAA	1 cut(s)	2090
BspTNI	GGTCTC	1 cut(s)	488
BsrDI	GCAATG	1 cut(s)	675
BsrGI	TGTACA	1 cut(s)	1090
BsrI	ACTGG	9 cut(s)	176, 376, 579, 604, 710, 765, 835, 921, 1709
BssECI	CCNNGG	9 cut(s)	220, 231, 284, 1288, 1289, 1938, 1939, 2028, 2149
BssMI	GATC	6 cut(s)	34, 616, 1047, 1568, 1582, 1615
BssNI	GRCGYC	1 cut(s)	1099
BssSI	CACGAG	1 cut(s)	627
BssT1I	CCWWGG	3 cut(s)	231, 284, 2149
Bst2BI	CACGAG	1 cut(s)	627
Bst2UI	CCWGG	5 cut(s)	189, 297, 700, 1290, 1940
Bst4CI	ACNGT	7 cut(s)	79, 196, 551, 1339, 1666, 1736, 1797
Bst6I	CTCTTC	2 cut(s)	15, 147
BstACI	GRCGYC	1 cut(s)	1099
BstAUI	TGTACA	1 cut(s)	1090
BstBI	TTCGAA	1 cut(s)	2090
BstC8I	GCNNGC	7 cut(s)	273, 324, 657, 867, 903, 1639, 2077
BstDEI	CTNAG	8 cut(s)	88, 255, 315, 429, 1260, 1369, 1422, 2199
BstDSI	CCRYGG	1 cut(s)	2149
BstEII	GGTNACC	1 cut(s)	1083
BstF5I	GGATG	8 cut(s)	184, 241, 459, 490, 583, 759, 781, 1585
BstHHI	GCGC	2 cut(s)	871, 2010
BstKTI	GATC	6 cut(s)	37, 619, 1050, 1571, 1585, 1618
BstMAI	GTCTC	3 cut(s)	88, 488, 2114
BstMBI	GATC	6 cut(s)	34, 616, 1047, 1568, 1582, 1615
BstMWI	GCNNNNNNNGC	2 cut(s)	515, 665
BstNI	CCWGG	5 cut(s)	189, 297, 700, 1290, 1940
BstPI	GGTNACC	1 cut(s)	1083
BstSCI	CCNGG	6 cut(s)	187, 220, 295, 698, 1288, 1938
BstSFI	CTRYAG	7 cut(s)	75, 351, 550, 657, 1299, 1509, 1876
BstSLI	GKGCMC	2 cut(s)	1289, 1939
BstV1I	GCAGC	2 cut(s)	343, 671
BstV2I	GAAGAC	4 cut(s)	232, 1316, 2034, 2099
BstX2I	RGATCY	3 cut(s)	34, 616, 1568
BstYI	RGATCY	3 cut(s)	34, 616, 1568
BsuRI	GGCC	7 cut(s)	271, 1230, 1287, 1722, 1791, 1874, 1944
BtgI	CCRYGG	1 cut(s)	2149
BtgZI	GCGATG	1 cut(s)	975
BtsCI	GGATG	8 cut(s)	184, 241, 459, 490, 583, 759, 781, 1585
BtsIMutI	CAGTG	3 cut(s)	183, 928, 1702
Cac8I	GCNNGC	7 cut(s)	273, 324, 657, 867, 903, 1639, 2077
CaiI	CAGNNNCTG	2 cut(s)	95, 194
CciI	TCATGA	2 cut(s)	636, 1147
CfoI	GCGC	2 cut(s)	871, 2010
Cfr13I	GGNCC	7 cut(s)	173, 581, 1285, 1286, 1942, 1967, 2173
CseI	GACGC	2 cut(s)	524, 1088
Csp6I	GTAC	5 cut(s)	192, 380, 696, 1091, 1396
CviAII	CATG	4 cut(s)	637, 1148, 1835, 2150
CviQI	GTAC	5 cut(s)	192, 380, 696, 1091, 1396
DdeI	CTNAG	8 cut(s)	88, 255, 315, 429, 1260, 1369, 1422, 2199
DpnI	GATC	6 cut(s)	36, 618, 1049, 1570, 1584, 1617
DpnII	GATC	6 cut(s)	34, 616, 1047, 1568, 1582, 1615
DraI	TTTAAA	1 cut(s)	1785
DrdI	GACNNNNNNGTC	1 cut(s)	579
DseDI	GACNNNNNNGTC	1 cut(s)	579
Eam1104I	CTCTTC	2 cut(s)	15, 147
EarI	CTCTTC	2 cut(s)	15, 147
EciI	GGCGGA	1 cut(s)	282
Eco130I	CCWWGG	3 cut(s)	231, 284, 2149
Eco24I	GRGCYC	1 cut(s)	1289
Eco31I	GGTCTC	1 cut(s)	488
Eco32I	GATATC	1 cut(s)	589
Eco47I	GGWCC	4 cut(s)	173, 581, 1967, 2173
Eco57I	CTGAAG	2 cut(s)	660, 870
Eco88I	CYCGRG	3 cut(s)	717, 1728, 2029
Eco91I	GGTNACC	1 cut(s)	1083
EcoO109I	RGGNCCY	1 cut(s)	2173
EcoO65I	GGTNACC	1 cut(s)	1083
EcoRI	GAATTC	2 cut(s)	1351, 1843
EcoRII	CCWGG	5 cut(s)	187, 295, 698, 1288, 1938
EcoRV	GATATC	1 cut(s)	589
EcoT14I	CCWWGG	3 cut(s)	231, 284, 2149
EcoT38I	GRGCYC	1 cut(s)	1289
ErhI	CCWWGG	3 cut(s)	231, 284, 2149
FaeI	CATG	4 cut(s)	640, 1151, 1838, 2153
FalI	AAGNNNNNCTT	4 cut(s)	1149, 1181, 1997, 2029
FaqI	GGGAC	2 cut(s)	848, 1745
FatI	CATG	4 cut(s)	636, 1147, 1834, 2149
FbaI	TGATCA	1 cut(s)	1582
FblI	GTMKAC	1 cut(s)	1903
Fnu4HI	GCNGC	2 cut(s)	357, 660
FokI	GGATG	8 cut(s)	171, 248, 466, 497, 590, 766, 768, 1592
FriOI	GRGCYC	1 cut(s)	1289
Fsp4HI	GCNGC	2 cut(s)	357, 660
FspBI	CTAG	3 cut(s)	1203, 2019, 2076
GlaI	GCGC	2 cut(s)	870, 2009
GluI	GCNGC	2 cut(s)	357, 660
GsuI	CTGGAG	2 cut(s)	1177, 1528
HaeIII	GGCC	7 cut(s)	271, 1230, 1287, 1722, 1791, 1874, 1944
HapII	CCGG	2 cut(s)	222, 2192
HgaI	GACGC	2 cut(s)	524, 1088
HhaI	GCGC	2 cut(s)	871, 2010
Hin1I	GRCGYC	1 cut(s)	1099
Hin1II	CATG	4 cut(s)	640, 1151, 1838, 2153
Hin6I	GCGC	2 cut(s)	869, 2008
HinP1I	GCGC	2 cut(s)	869, 2008
HincII	GTYRAC	3 cut(s)	1654, 1669, 1904
HindII	GTYRAC	3 cut(s)	1654, 1669, 1904
HindIII	AAGCTT	2 cut(s)	1639, 2196
HpaII	CCGG	2 cut(s)	222, 2192
HphI	GGTGA	6 cut(s)	63, 500, 1042, 1077, 1113, 1502
Hpy166II	GTNNAC	7 cut(s)	572, 971, 1654, 1669, 1702, 1904, 2063
Hpy8I	GTNNAC	7 cut(s)	572, 971, 1654, 1669, 1702, 1904, 2063
Hpy99I	CGWCG	1 cut(s)	1908
HpyAV	CCTTC	8 cut(s)	103, 294, 616, 751, 845, 1498, 2097, 2186
HpyCH4III	ACNGT	7 cut(s)	79, 196, 551, 1339, 1666, 1736, 1797
HpyCH4V	TGCA	5 cut(s)	509, 659, 865, 1333, 1637
HpyF10VI	GCNNNNNNNGC	2 cut(s)	515, 665
HpyF3I	CTNAG	8 cut(s)	88, 255, 315, 429, 1260, 1369, 1422, 2199
Hsp92I	GRCGYC	1 cut(s)	1099
Hsp92II	CATG	4 cut(s)	640, 1151, 1838, 2153
HspAI	GCGC	2 cut(s)	869, 2008
Ksp22I	TGATCA	1 cut(s)	1582
Kzo9I	GATC	6 cut(s)	34, 616, 1047, 1568, 1582, 1615
LmnI	GCTCC	2 cut(s)	211, 2034
Lsp1109I	GCAGC	2 cut(s)	343, 671
LweI	GCATC	3 cut(s)	193, 496, 952
MaeI	CTAG	3 cut(s)	1203, 2019, 2076
MaeIII	GTNAC	5 cut(s)	120, 424, 434, 1083, 1112
MalI	GATC	6 cut(s)	36, 618, 1049, 1570, 1584, 1617
MboI	GATC	6 cut(s)	34, 616, 1047, 1568, 1582, 1615
MfeI	CAATTG	2 cut(s)	872, 2124
MflI	RGATCY	3 cut(s)	34, 616, 1568
MhlI	GDGCHC	3 cut(s)	1289, 1485, 1939
MlyI	GAGTC	5 cut(s)	619, 1303, 1306, 1535, 2003
MmeI	TCCRAC	3 cut(s)	749, 1065, 2163
MroXI	GAANNNNTTC	3 cut(s)	304, 1140, 1603
MseI	TTAA	6 cut(s)	39, 789, 1643, 1784, 2003, 2130
MslI	CAYNNNNRTG	2 cut(s)	1488, 1833
MspA1I	CMGCKG	1 cut(s)	356
MspI	CCGG	2 cut(s)	222, 2192
MspR9I	CCNGG	6 cut(s)	189, 222, 297, 700, 1290, 1940
MunI	CAATTG	2 cut(s)	872, 2124
Mva1269I	GAATGC	1 cut(s)	949
MvaI	CCWGG	5 cut(s)	189, 297, 700, 1290, 1940
MwoI	GCNNNNNNNGC	2 cut(s)	515, 665
NciI	CCSGG	1 cut(s)	222
NcoI	CCATGG	1 cut(s)	2149
NdeII	GATC	6 cut(s)	34, 616, 1047, 1568, 1582, 1615
NheI	GCTAGC	1 cut(s)	2075
NlaIII	CATG	4 cut(s)	640, 1151, 1838, 2153
NlaIV	GGNNCC	3 cut(s)	604, 1287, 1606
NmuCI	GTSAC	3 cut(s)	120, 434, 1083
NspV	TTCGAA	1 cut(s)	2090
OliI	CACNNNNGTG	1 cut(s)	1488
PaeR7I	CTCGAG	1 cut(s)	717
PagI	TCATGA	2 cut(s)	636, 1147
PasI	CCCWGGG	2 cut(s)	1289, 1939
PctI	GAATGC	1 cut(s)	949
PdmI	GAANNNNTTC	3 cut(s)	304, 1140, 1603
PfeI	GAWTC	7 cut(s)	401, 476, 533, 1037, 1325, 1390, 1622
PkrI	GCNGC	2 cut(s)	358, 661
PleI	GAGTC	5 cut(s)	619, 1302, 1306, 1535, 2002
PpsI	GAGTC	5 cut(s)	619, 1302, 1306, 1535, 2002
PpuMI	RGGWCCY	1 cut(s)	2173
PsiI	TTATAA	1 cut(s)	546
Psp5II	RGGWCCY	1 cut(s)	2173
Psp6I	CCWGG	5 cut(s)	187, 295, 698, 1288, 1938
PspEI	GGTNACC	1 cut(s)	1083
PspGI	CCWGG	5 cut(s)	187, 295, 698, 1288, 1938
PspN4I	GGNNCC	3 cut(s)	604, 1287, 1606
PspOMI	GGGCCC	1 cut(s)	1285
PspPI	GGNCC	7 cut(s)	173, 581, 1285, 1286, 1942, 1967, 2173
PspPPI	RGGWCCY	1 cut(s)	2173
PstI	CTGCAG	1 cut(s)	661
PstNI	CAGNNNCTG	2 cut(s)	95, 194
PsuI	RGATCY	3 cut(s)	34, 616, 1568
PvuII	CAGCTG	1 cut(s)	356
RsaI	GTAC	5 cut(s)	193, 381, 697, 1092, 1397
RsaNI	GTAC	5 cut(s)	192, 380, 696, 1091, 1396
RseI	CAYNNNNRTG	2 cut(s)	1488, 1833
SalI	GTCGAC	1 cut(s)	1902
SaqAI	TTAA	6 cut(s)	39, 789, 1643, 1784, 2003, 2130
SatI	GCNGC	2 cut(s)	357, 660
Sau3AI	GATC	6 cut(s)	34, 616, 1047, 1568, 1582, 1615
Sau96I	GGNCC	7 cut(s)	173, 581, 1285, 1286, 1942, 1967, 2173
SchI	GAGTC	5 cut(s)	619, 1303, 1306, 1535, 2003
ScrFI	CCNGG	6 cut(s)	189, 222, 297, 700, 1290, 1940
SduI	GDGCHC	3 cut(s)	1289, 1485, 1939
SfaNI	GCATC	3 cut(s)	193, 496, 952
SfcI	CTRYAG	7 cut(s)	75, 351, 550, 657, 1299, 1509, 1876
Sfr274I	CTCGAG	1 cut(s)	717
SfuI	TTCGAA	1 cut(s)	2090
SinI	GGWCC	4 cut(s)	173, 581, 1967, 2173
SlaI	CTCGAG	1 cut(s)	717
SmiMI	CAYNNNNRTG	2 cut(s)	1488, 1833
SmlI	CTYRAG	1 cut(s)	717
SmoI	CTYRAG	1 cut(s)	717
SpeI	ACTAGT	1 cut(s)	1202
SsiI	CCGC	2 cut(s)	293, 2161
SspI	AATATT	1 cut(s)	1267
SspMI	CTAG	3 cut(s)	1203, 2019, 2076
StyD4I	CCNGG	6 cut(s)	187, 220, 295, 698, 1288, 1938
StyI	CCWWGG	3 cut(s)	231, 284, 2149
TaaI	ACNGT	7 cut(s)	79, 196, 551, 1339, 1666, 1736, 1797
TaqI	TCGA	6 cut(s)	524, 611, 718, 1745, 1903, 2090
TatI	WGTACW	3 cut(s)	379, 1090, 1395
TfiI	GAWTC	7 cut(s)	401, 476, 533, 1037, 1325, 1390, 1622
Tru1I	TTAA	6 cut(s)	39, 789, 1643, 1784, 2003, 2130
Tru9I	TTAA	6 cut(s)	39, 789, 1643, 1784, 2003, 2130
TscAI	CASTG	3 cut(s)	183, 928, 1709
TseFI	GTSAC	3 cut(s)	120, 434, 1083
TseI	GCWGC	2 cut(s)	356, 659
Tsp45I	GTSAC	3 cut(s)	120, 434, 1083
TspDTI	ATGAA	9 cut(s)	252, 625, 770, 864, 1133, 1164, 1428, 1449, 1455
TspRI	CASTG	3 cut(s)	183, 928, 1709
VpaK11BI	GGWCC	4 cut(s)	173, 581, 1967, 2173
XapI	RAATTY	7 cut(s)	244, 1031, 1351, 1357, 1416, 1843, 1916
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1867, 1995
XhoI	CTCGAG	1 cut(s)	717
XmiI	GTMKAC	1 cut(s)	1903
XmnI	GAANNNNTTC	3 cut(s)	304, 1140, 1603
XspI	CTAG	3 cut(s)	1203, 2019, 2076

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.