Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0002485

Physical Location & Seq

Genomic Coordinates Forward (+)

42773510 .. 42776027

Gene Structure 2518 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG328000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGAAGAGAAGCAGTTGAATTTTAACCGGCCACTTCTATCTGTGAGACGTTTCTCAGCAAAAACTGTCTCCTCAGAAGCTGATGACAAAAGGAAGACAGCTAAATCACAACCAAAACTACCTCCTCTTCCTGCTTACAAGTCAGAACTGAAATCAGGTCCAGTGAGGAATCCGGGAACTGTTCCTTTTATATGGGAGCAAATTCCAGGAAGACCCAAGGACGAAAGTATACCCAAAAATCAGGATCTTGAAGGGCCTCTGGTTGCACCAAAGCTTCCACCTGGAAGGGTCTCAAAGGTTAAGAAGCAAGGGTTGGATAAAGGTTCTAAAGGTACAACAGCTGCTCAATCCCAAAATGGGAATGTGCTTTCCAGTTCTCAAAATATTTCAGCCTTGGAGAGAAAAGTAGCTACTAAAGATGAAACGTCTAAAGAGGGGAAGGAGGAGAGGACTAGTTCAGAGGATGGTGATGAGACCTATTTAGATGCACTTGATGCACTTTCTAGAACTGCATCAGCCTATATGAACTGTAGTGTAAGTGGTTTAAGTGGACTGGATGATCCAGATATCATACCCTCGGGAACTTTCTCAACAGATCCACAGACACGGGATTTCATGATGGGTCGGTTCTTGCCTGCAGCAAAAGCAATGGCTTCAGAAACACCTCATAATGCTCCTAGGAAGCAACCAGTGGCTAGAGAGCAACCTATTTCCAGAGAGGAACCAAGAAGGGTGAGAAAGGTAGTGACTGGGGATAAGCGGCATCAATTTAATCAATATAGGCCACTTTATGTTCGAGATATAGCTGGGGACGCAAGTAAGGATGAAGGGATGAGAATGCCTGTGCAAGTACCCATTTCTTCTGTTCGTAGAGTGCACGGTAACTCTTCTTATGCTGGTTCTCACACTGAAGCTAAAGAAAAGCATGCCGGGAGTGGTTTATATAAACAAAGATTAATTAGTGGTGATCAAGAAGCTGGGCTGCATGAAGATAACATTGATTTGAAACGTGAATCCAACCAGACCAGTAACAGAAGCAATGGTCTGACATTAGATGGGTCATCAGTAAACAGGCGTCTGCAGGGTAGTGGCATATCACCCTACCGTAGGGAATGTTCTCAGTCTATCCTTCATGATGGAAAATGTTTTCTTGGTATTCCTGAGAAAGCTAAGAGTTCCAAGGAGACTAGTAGCTCGGATAAATATAGAAAAGGCCACAGGTTTCTGGAAATATTAGCTAGTGAAAATGCTGAATGGGAAGCGGGTTTAGGAAGTCCTGTGGTTGAGAAGACACTGTATGTTGATTCTGTACAGACAGTAAAATCTTCAAGTTCAAATTCATTTTCCTCAGATATAAAGGGCAAGGTAAAGGGACTTATTGATTACAGACGGAATGATTTGGACATTCCTGAAAGAAGTGGTGAAATGGAAGAAACTCCATTGGCAGAGTCTCCATGTCAAGATATTGAACACTTGCGGTATGTGAATGAGAAGGCAGTAGTTCAGTTTAAATGTTTGGACTTAGAAAACTCCAGTTTCCTGTCTTCTTCTGGCAAATCAACCGGTGATGTGCAAACAATCACAAGAAATGGTTCTCTACAGGATCAAAAGGATTGTAACAAACTGGCAATATCAAAAGTGGCCAACCAAGAGGCGTTTAATTTAGAAAGCCAACAGTTGGAGAATTCAGATGATCAAGAAAATTGCCACGGCCTTACTGAGGAATGTATTAGGTTGACAAGCGTGAATCTGGCTGATGAGGAGAACACTGATTTAGAAACCCAACAGCCTAAGACTTCAGGTACGTCTCATGGCCTAGTTCAAAATTCTATTACCTTGATCAGCTCGAAAGTGGCCCGGAAGGGGAAGATTGATTTAGAAAGTCAATGTCTTGTGAAACTTGGTAATCAAGGTAGTTCCCAGGGCAACAATGCACGACTACCTCTTGGACCTCCTTTACCAAAATCACCGTCAGAGTCTTGGCTAAAGCGTACCTTGCCTACCATTTCCTCCAGGAATTCATCTTCACAGTCATCTCTTGGTTCACGCATTTATACCAGCAGTCCGGTTTCTAAGGTATCCTCTCTCGATCCCAAGTGGGAGACGATTGTCAAAACTTCTAATGTGCATCACGGGCGTTCACGGTTCTCTGAGGAACTTCTTACACCTATACCAGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF688

Protein Analysis

727

Amino Acids

79.78

Weight (kDa)

8.58

Isoelectric Point (pI)

52.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF688	PF05097	1 - 268	9.8e-76	Protein of unknown function (DUF688)
DUF688	PF05097	278 - 453	1.8e-16	Protein of unknown function (DUF688)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30990 AT2G30990 AT2G30990 AT2G30990 AT2G30990
fragaria_vesca	FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510
malus_domestica	MD09G1236600.v1.1 MD17G1266300.v1.1 MD17G1266400.v1.1
prunus_persica	Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1
pyrus_communis	pycom09g15510 pycom09g15520 pycom17g26590
rosa_chinensis	RchiOBHm_Chr2g0129801 RchiOBHm_Chr2g0129871 RchiOBHm_Chr7g0242591 RchiOBHm_Chr7g0242601
rosa_laevigata	RLG00000019104 RLG00000031611
rosa_multiflora	Rmu_sc0000650.1_g000026 Rmu_sc0007216.1_g000002
rosa_roxburghii	Rroxscaffold_2G00114300
rosa_rugosa	Rorug02G0289800 Rorug02G0289900 Rorug02G0290000 Rorug02G0290100 Rorug02G0290200
rosa_samantha	Rh2AG340700 Rh2AG341300 Rh2BG349100 Rh2CG328000 Rh2DG367400 Rh3CG154600 Rh3DG155700
rosa_wichuraiana	Rw2G027770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1678
AccI	GTMKAC	1 cut(s)	229
AciI	CCGC	3 cut(s)	760, 1262, 1477
AclWI	GGATC	5 cut(s)	252, 554, 590, 1611, 2084
AcoI	YGGCCR	2 cut(s)	29, 1641
AcsI	RAATTY	6 cut(s)	19, 201, 1336, 1684, 1825, 2017
AcuI	CTGAAG	3 cut(s)	639, 930, 1782
AcyI	GRCGYC	1 cut(s)	1075
AfaI	GTAC	5 cut(s)	334, 852, 1311, 1804, 1993
AfiI	CCNNNNNNNGG	5 cut(s)	357, 1107, 1678, 1720, 1863
AgeI	ACCGGT	1 cut(s)	1562
AgsI	TTSAA	7 cut(s)	19, 251, 1006, 1329, 1335, 1469, 1823
AhlI	ACTAGT	2 cut(s)	452, 1187
AjnI	CCWGG	4 cut(s)	205, 280, 1920, 2012
AjuI	GAANNNNNNNTTGG	2 cut(s)	296, 328
Alw21I	GWGCWC	1 cut(s)	879
Alw26I	GTCTC	8 cut(s)	40, 73, 295, 467, 1178, 1455, 1812, 2096
Alw44I	GTGCAC	1 cut(s)	875
AlwI	GGATC	5 cut(s)	252, 554, 590, 1611, 2084
AlwNI	CAGNNNCTG	1 cut(s)	80
Ama87I	CYCGRG	1 cut(s)	577
AoxI	GGCC	8 cut(s)	29, 254, 782, 1213, 1641, 1711, 1813, 1854
ApaLI	GTGCAC	1 cut(s)	875
ApeKI	GCWGC	3 cut(s)	341, 638, 982
ApoI	RAATTY	6 cut(s)	19, 201, 1336, 1684, 1825, 2017
ArsI	GACNNNNNNTTYG	2 cut(s)	1955, 1987
AseI	ATTAAT	1 cut(s)	956
AsiGI	ACCGGT	1 cut(s)	1562
Asp700I	GAANNNNTTC	1 cut(s)	1591
AspA2I	CCTAGG	1 cut(s)	677
AspS9I	GGNCC	4 cut(s)	158, 254, 1855, 1949
AsuC2I	CCSGG	3 cut(s)	174, 931, 1858
AsuHPI	GGTGA	7 cut(s)	479, 745, 977, 1089, 1433, 1577, 1959
AvaI	CYCGRG	1 cut(s)	577
AvaII	GGWCC	2 cut(s)	158, 1949
AvrII	CCTAGG	1 cut(s)	677
BaeGI	GKGCMC	1 cut(s)	879
BalI	TGGCCA	1 cut(s)	1643
BbsI	GAAGAC	4 cut(s)	101, 217, 1295, 1536
Bbv12I	GWGCWC	1 cut(s)	879
BbvI	GCAGC	3 cut(s)	328, 650, 969
BccI	CCATC	4 cut(s)	458, 613, 1049, 1130
BceAI	ACGGC	1 cut(s)	1726
BciT130I	CCWGG	4 cut(s)	207, 282, 1922, 2014
BciVI	GTATCC	1 cut(s)	2089
BclI	TGATCA	3 cut(s)	967, 1693, 1839
BcnI	CCSGG	3 cut(s)	174, 931, 1858
BcoDI	GTCTC	8 cut(s)	40, 73, 295, 467, 1178, 1455, 1812, 2096
BcuI	ACTAGT	2 cut(s)	452, 1187
BfaI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1817
BfmI	CTRYAG	4 cut(s)	529, 636, 1079, 1598
BfuI	GTATCC	1 cut(s)	2089
BisI	GCNGC	4 cut(s)	342, 639, 761, 983
BlnI	CCTAGG	1 cut(s)	677
BlsI	GCNGC	4 cut(s)	343, 640, 762, 984
Bme1390I	CCNGG	7 cut(s)	174, 207, 282, 931, 1858, 1922, 2014
Bme18I	GGWCC	2 cut(s)	158, 1949
BmeT110I	CYCGRG	1 cut(s)	577
BmgT120I	GGNCC	4 cut(s)	158, 254, 1855, 1949
BmiI	GGNNCC	1 cut(s)	723
BmrFI	CCNGG	7 cut(s)	174, 207, 282, 931, 1858, 1922, 2014
BmrI	ACTGGG	1 cut(s)	759
BmsI	GCATC	5 cut(s)	475, 484, 521, 772, 2137
BmuI	ACTGGG	1 cut(s)	759
BoxI	GACNNNNGTC	1 cut(s)	2108
BpiI	GAAGAC	4 cut(s)	101, 217, 1295, 1536
BpmI	CTGGAG	2 cut(s)	1516, 1996
BpuMI	CCSGG	3 cut(s)	174, 931, 1858
BsaHI	GRCGYC	1 cut(s)	1075
BsaI	GGTCTC	2 cut(s)	295, 467
BsaJI	CCNNGG	8 cut(s)	216, 393, 576, 677, 1179, 1708, 1920, 1921
BsaWI	WCCGGW	2 cut(s)	1562, 2065
Bsc4I	CCNNNNNNNGG	5 cut(s)	357, 1107, 1678, 1720, 1863
Bse118I	RCCGGY	2 cut(s)	27, 1562
Bse1I	ACTGG	8 cut(s)	161, 372, 558, 689, 754, 1026, 1533, 1629
Bse3DI	GCAATG	2 cut(s)	654, 1045
BseBI	CCWGG	4 cut(s)	207, 282, 1922, 2014
BseDI	CCNNGG	8 cut(s)	216, 393, 576, 677, 1179, 1708, 1920, 1921
BseGI	GGATG	4 cut(s)	469, 562, 829, 837
BseLI	CCNNNNNNNGG	5 cut(s)	357, 1107, 1678, 1720, 1863
BseMI	GCAATG	2 cut(s)	654, 1045
BseMII	CTCAG	7 cut(s)	69, 87, 1133, 1152, 1362, 1710, 2142
BseNI	ACTGG	8 cut(s)	161, 372, 558, 689, 754, 1026, 1533, 1629
BseRI	GAGGAG	4 cut(s)	61, 114, 458, 1775
BseSI	GKGCMC	1 cut(s)	879
BseXI	GCAGC	3 cut(s)	328, 650, 969
BseYI	CCCAGC	2 cut(s)	806, 977
BshFI	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1815, 1856
BshTI	ACCGGT	1 cut(s)	1562
BsiHKAI	GWGCWC	1 cut(s)	879
BsiHKCI	CYCGRG	1 cut(s)	577
BsiSI	CCGG	6 cut(s)	28, 173, 930, 1563, 1858, 2066
BslFI	GGGAC	2 cut(s)	824, 1386
BslI	CCNNNNNNNGG	5 cut(s)	357, 1107, 1678, 1720, 1863
BsmAI	GTCTC	8 cut(s)	40, 73, 295, 467, 1178, 1455, 1812, 2096
BsmBI	CGTCTC	3 cut(s)	40, 1812, 2096
BsmFI	GGGAC	2 cut(s)	824, 1386
BsmI	GAATGC	1 cut(s)	843
BsnI	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1815, 1856
Bso31I	GGTCTC	2 cut(s)	295, 467
BsoBI	CYCGRG	1 cut(s)	577
Bsp1286I	GDGCHC	1 cut(s)	879
Bsp1407I	TGTACA	1 cut(s)	1309
Bsp143I	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1839, 2089
BspACI	CCGC	3 cut(s)	760, 1262, 1477
BspANI	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1815, 1856
BspCNI	CTCAG	7 cut(s)	68, 86, 1132, 1153, 1361, 1711, 2143
BspHI	TCATGA	2 cut(s)	615, 1132
BspLI	GGNNCC	1 cut(s)	723
BspMAI	CTGCAG	2 cut(s)	640, 1083
BspPI	GGATC	5 cut(s)	252, 554, 590, 1611, 2084
BspTNI	GGTCTC	2 cut(s)	295, 467
BsrDI	GCAATG	2 cut(s)	654, 1045
BsrFI	RCCGGY	2 cut(s)	27, 1562
BsrGI	TGTACA	1 cut(s)	1309
BsrI	ACTGG	8 cut(s)	161, 372, 558, 689, 754, 1026, 1533, 1629
BssAI	RCCGGY	2 cut(s)	27, 1562
BssECI	CCNNGG	8 cut(s)	216, 393, 576, 677, 1179, 1708, 1920, 1921
BssMI	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1839, 2089
BssNAI	GTATAC	1 cut(s)	230
BssNI	GRCGYC	1 cut(s)	1075
BssT1I	CCWWGG	4 cut(s)	216, 393, 677, 1179
Bst1107I	GTATAC	1 cut(s)	230
Bst2UI	CCWGG	4 cut(s)	207, 282, 1922, 2014
Bst6I	CTCTTC	2 cut(s)	132, 892
BstACI	GRCGYC	1 cut(s)	1075
BstAPI	GCANNNNNTGC	1 cut(s)	494
BstAUI	TGTACA	1 cut(s)	1309
BstC8I	GCNNGC	2 cut(s)	636, 927
BstDSI	CCRYGG	1 cut(s)	1708
BstENI	CCTNNNNNAGG	2 cut(s)	1105, 1718
BstF5I	GGATG	4 cut(s)	469, 562, 829, 837
BstKTI	GATC	8 cut(s)	247, 562, 598, 970, 1606, 1696, 1842, 2092
BstMAI	GTCTC	8 cut(s)	40, 73, 295, 467, 1178, 1455, 1812, 2096
BstMBI	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1839, 2089
BstMWI	GCNNNNNNNGC	5 cut(s)	494, 644, 812, 1996, 2134
BstNI	CCWGG	4 cut(s)	207, 282, 1922, 2014
BstNSI	RCATGY	1 cut(s)	929
BstPAI	GACNNNNGTC	1 cut(s)	2108
BstSCI	CCNGG	7 cut(s)	172, 205, 280, 929, 1856, 1920, 2012
BstSFI	CTRYAG	4 cut(s)	529, 636, 1079, 1598
BstSLI	GKGCMC	1 cut(s)	879
BstV1I	GCAGC	3 cut(s)	328, 650, 969
BstV2I	GAAGAC	4 cut(s)	101, 217, 1295, 1536
BstX2I	RGATCY	2 cut(s)	244, 595
BstYI	RGATCY	2 cut(s)	244, 595
BstZ17I	GTATAC	1 cut(s)	230
BsuI	GTATCC	1 cut(s)	2089
BsuRI	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1815, 1856
BtgI	CCRYGG	1 cut(s)	1708
BtsCI	GGATG	4 cut(s)	469, 562, 829, 837
BtsIMutI	CAGTG	5 cut(s)	168, 696, 906, 1292, 1767
Cac8I	GCNNGC	2 cut(s)	636, 927
CaiI	CAGNNNCTG	1 cut(s)	80
CciI	TCATGA	2 cut(s)	615, 1132
Cfr10I	RCCGGY	2 cut(s)	27, 1562
Cfr13I	GGNCC	4 cut(s)	158, 254, 1855, 1949
CseI	GACGC	2 cut(s)	821, 1064
Csp6I	GTAC	5 cut(s)	333, 851, 1310, 1803, 1992
CspAI	ACCGGT	1 cut(s)	1562
CviAII	CATG	6 cut(s)	616, 926, 986, 1133, 1455, 1811
CviQI	GTAC	5 cut(s)	333, 851, 1310, 1803, 1992
DpnI	GATC	8 cut(s)	246, 561, 597, 969, 1605, 1695, 1841, 2091
DpnII	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1839, 2089
DraI	TTTAAA	1 cut(s)	1510
EaeI	YGGCCR	2 cut(s)	29, 1641
Eam1104I	CTCTTC	2 cut(s)	132, 892
EarI	CTCTTC	2 cut(s)	132, 892
Eco130I	CCWWGG	4 cut(s)	216, 393, 677, 1179
Eco31I	GGTCTC	2 cut(s)	295, 467
Eco32I	GATATC	1 cut(s)	568
Eco47I	GGWCC	2 cut(s)	158, 1949
Eco57I	CTGAAG	3 cut(s)	639, 930, 1782
Eco88I	CYCGRG	1 cut(s)	577
EcoNI	CCTNNNNNAGG	2 cut(s)	1105, 1718
EcoO109I	RGGNCCY	1 cut(s)	254
EcoRI	GAATTC	2 cut(s)	1684, 2017
EcoRII	CCWGG	4 cut(s)	205, 280, 1920, 2012
EcoRV	GATATC	1 cut(s)	568
EcoT14I	CCWWGG	4 cut(s)	216, 393, 677, 1179
ErhI	CCWWGG	4 cut(s)	216, 393, 677, 1179
Esp3I	CGTCTC	3 cut(s)	40, 1812, 2096
FaeI	CATG	6 cut(s)	619, 929, 989, 1136, 1458, 1814
FalI	AAGNNNNNCTT	2 cut(s)	1979, 2011
FaqI	GGGAC	2 cut(s)	824, 1386
FatI	CATG	6 cut(s)	615, 925, 985, 1132, 1454, 1810
FauI	CCCGC	1 cut(s)	1255
FbaI	TGATCA	3 cut(s)	967, 1693, 1839
FblI	GTMKAC	1 cut(s)	229
Fnu4HI	GCNGC	4 cut(s)	342, 639, 761, 983
FokI	GGATG	4 cut(s)	476, 569, 836, 844
Fsp4HI	GCNGC	4 cut(s)	342, 639, 761, 983
FspBI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1817
GluI	GCNGC	4 cut(s)	342, 639, 761, 983
GsaI	CCCAGC	2 cut(s)	810, 981
GsuI	CTGGAG	2 cut(s)	1516, 1996
HaeIII	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1815, 1856
HapII	CCGG	6 cut(s)	28, 173, 930, 1563, 1858, 2066
HgaI	GACGC	2 cut(s)	821, 1064
Hin1I	GRCGYC	1 cut(s)	1075
Hin1II	CATG	6 cut(s)	619, 929, 989, 1136, 1458, 1814
HincII	GTYRAC	1 cut(s)	1737
HindII	GTYRAC	1 cut(s)	1737
HindIII	AAGCTT	2 cut(s)	272, 2178
HinfI	GANTC	6 cut(s)	169, 1013, 1304, 1448, 1747, 1976
HpaII	CCGG	6 cut(s)	28, 173, 930, 1563, 1858, 2066
HphI	GGTGA	7 cut(s)	479, 745, 977, 1089, 1433, 1577, 1959
Hpy166II	GTNNAC	7 cut(s)	230, 551, 877, 1069, 1737, 2045, 2141
Hpy8I	GTNNAC	7 cut(s)	230, 551, 877, 1069, 1737, 2045, 2141
HpyAV	CCTTC	8 cut(s)	245, 279, 433, 723, 821, 1139, 1486, 1855
HpyCH4IV	ACGT	4 cut(s)	49, 425, 1009, 1805
HpyF10VI	GCNNNNNNNGC	5 cut(s)	494, 644, 812, 1996, 2134
HpySE526I	ACGT	4 cut(s)	49, 425, 1009, 1805
Hsp92I	GRCGYC	1 cut(s)	1075
Hsp92II	CATG	6 cut(s)	619, 929, 989, 1136, 1458, 1814
Ksp22I	TGATCA	3 cut(s)	967, 1693, 1839
Kzo9I	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1839, 2089
LmnI	GCTCC	2 cut(s)	196, 679
Lsp1109I	GCAGC	3 cut(s)	328, 650, 969
LweI	GCATC	5 cut(s)	475, 484, 521, 772, 2137
MaeI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1817
MaeII	ACGT	4 cut(s)	49, 425, 1009, 1805
MaeIII	GTNAC	4 cut(s)	745, 881, 1028, 1616
MalI	GATC	8 cut(s)	246, 561, 597, 969, 1605, 1695, 1841, 2091
MboI	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1839, 2089
MflI	RGATCY	2 cut(s)	244, 595
MhlI	GDGCHC	1 cut(s)	879
MlsI	TGGCCA	1 cut(s)	1643
MluNI	TGGCCA	1 cut(s)	1643
MlyI	GAGTC	2 cut(s)	1457, 1985
MmeI	TCCRAC	3 cut(s)	294, 1041, 1659
Mox20I	TGGCCA	1 cut(s)	1643
MroXI	GAANNNNTTC	1 cut(s)	1591
MscI	TGGCCA	1 cut(s)	1643
MseI	TTAA	7 cut(s)	24, 300, 545, 771, 956, 1509, 1659
Msp20I	TGGCCA	1 cut(s)	1643
MspA1I	CMGCKG	1 cut(s)	341
MspI	CCGG	6 cut(s)	28, 173, 930, 1563, 1858, 2066
MspR9I	CCNGG	7 cut(s)	174, 207, 282, 931, 1858, 1922, 2014
Mva1269I	GAATGC	1 cut(s)	843
MvaI	CCWGG	4 cut(s)	207, 282, 1922, 2014
MwoI	GCNNNNNNNGC	5 cut(s)	494, 644, 812, 1996, 2134
NciI	CCSGG	3 cut(s)	174, 931, 1858
NdeII	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1839, 2089
NlaIII	CATG	6 cut(s)	619, 929, 989, 1136, 1458, 1814
NlaIV	GGNNCC	1 cut(s)	723
NmuCI	GTSAC	1 cut(s)	745
NspI	RCATGY	1 cut(s)	929
PaeI	GCATGC	1 cut(s)	929
PagI	TCATGA	2 cut(s)	615, 1132
PasI	CCCWGGG	1 cut(s)	1921
PctI	GAATGC	1 cut(s)	843
PdmI	GAANNNNTTC	1 cut(s)	1591
PfeI	GAWTC	4 cut(s)	169, 1013, 1304, 1747
PflMI	CCANNNNNTGG	1 cut(s)	1678
PfoI	TCCNGGA	3 cut(s)	172, 205, 2012
PinAI	ACCGGT	1 cut(s)	1562
PkrI	GCNGC	4 cut(s)	343, 640, 762, 984
PleI	GAGTC	2 cut(s)	1456, 1984
PpsI	GAGTC	2 cut(s)	1456, 1984
PshAI	GACNNNNGTC	1 cut(s)	2108
PshBI	ATTAAT	1 cut(s)	956
Psp6I	CCWGG	4 cut(s)	205, 280, 1920, 2012
PspFI	CCCAGC	2 cut(s)	806, 977
PspGI	CCWGG	4 cut(s)	205, 280, 1920, 2012
PspN4I	GGNNCC	1 cut(s)	723
PspPI	GGNCC	4 cut(s)	158, 254, 1855, 1949
PsrI	GAACNNNNNNTAC	2 cut(s)	1099, 1131
PstI	CTGCAG	2 cut(s)	640, 1083
PstNI	CAGNNNCTG	1 cut(s)	80
PsuI	RGATCY	2 cut(s)	244, 595
PvuII	CAGCTG	1 cut(s)	341
RsaI	GTAC	5 cut(s)	334, 852, 1311, 1804, 1993
RsaNI	GTAC	5 cut(s)	333, 851, 1310, 1803, 1992
SaqAI	TTAA	7 cut(s)	24, 300, 545, 771, 956, 1509, 1659
SatI	GCNGC	4 cut(s)	342, 639, 761, 983
Sau3AI	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1839, 2089
Sau96I	GGNCC	4 cut(s)	158, 254, 1855, 1949
SchI	GAGTC	2 cut(s)	1457, 1985
ScrFI	CCNGG	7 cut(s)	174, 207, 282, 931, 1858, 1922, 2014
SduI	GDGCHC	1 cut(s)	879
SfaNI	GCATC	5 cut(s)	475, 484, 521, 772, 2137
SfcI	CTRYAG	4 cut(s)	529, 636, 1079, 1598
SinI	GGWCC	2 cut(s)	158, 1949
SpeI	ACTAGT	2 cut(s)	452, 1187
SphI	GCATGC	1 cut(s)	929
SsiI	CCGC	3 cut(s)	760, 1262, 1477
SspI	AATATT	2 cut(s)	385, 1233
SspMI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1817
StyD4I	CCNGG	7 cut(s)	172, 205, 280, 929, 1856, 1920, 2012
StyI	CCWWGG	4 cut(s)	216, 393, 677, 1179
TaiI	ACGT	4 cut(s)	52, 428, 1012, 1808
TaqI	TCGA	3 cut(s)	796, 1847, 2088
TatI	WGTACW	1 cut(s)	1309
TauI	GCSGC	1 cut(s)	763
TfiI	GAWTC	4 cut(s)	169, 1013, 1304, 1747
Tru1I	TTAA	7 cut(s)	24, 300, 545, 771, 956, 1509, 1659
Tru9I	TTAA	7 cut(s)	24, 300, 545, 771, 956, 1509, 1659
TscAI	CASTG	5 cut(s)	168, 696, 913, 1299, 1774
TseFI	GTSAC	1 cut(s)	745
TseI	GCWGC	3 cut(s)	341, 638, 982
Tsp45I	GTSAC	1 cut(s)	745
TspDTI	ATGAA	8 cut(s)	435, 539, 604, 840, 1002, 1121, 1329, 2010
TspGWI	ACGGA	1 cut(s)	1405
TspRI	CASTG	5 cut(s)	168, 696, 913, 1299, 1774
Van91I	CCANNNNNTGG	1 cut(s)	1678
VneI	GTGCAC	1 cut(s)	875
VpaK11BI	GGWCC	2 cut(s)	158, 1949
VspI	ATTAAT	1 cut(s)	956
XagI	CCTNNNNNAGG	2 cut(s)	1105, 1718
XapI	RAATTY	6 cut(s)	19, 201, 1336, 1684, 1825, 2017
XbaI	TCTAGA	1 cut(s)	503
XceI	RCATGY	1 cut(s)	929
XmaJI	CCTAGG	1 cut(s)	677
XmiI	GTMKAC	1 cut(s)	229
XmnI	GAANNNNTTC	1 cut(s)	1591
XspI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.