Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002485

Physical Location & Seq

Genomic Coordinates Forward (+)

45709984 .. 45714308

Gene Structure 4325 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50141

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGGAAGAGAAGCAGTTGAATTTTAACCGGCCACTTCTATCTGTGAGACGTTTCTCAGCAAAAACTGTCTCCTCAGAAGCTGATGACAAAAGGAAGACAGCTAAATCACAACCAAAACTACCTCCTCTTCCTGCTTACAAGTCAGAACTGAAATCAGGTCCAGTGAGGAATCCGGGAACTGTTCCTTTTATATGGGAGCAAATTCCAGGAAGACCCAAGGACGAAAGTATACCCAAAAATCAGGATCTTGAAGGGCCTCTGGTTGCACCAAAGCTTCCACCTGGAAGGGTCTCAAAGGTTAAGAAGCAAGGGTTGGATAAAGGTTCTAAAGGTACAACAGCTGCTCAATCCCAAAATGGGAATGTGCTTTCCAGTTCTCAAAATATTTCAGCCTTGGAGAGAAAAGTAGCTACTAAAGATGAAAGGTCTAAAGAGGGGAAGGAGGAGAGGACTAGTTCAGAGGATGGTGATGAGACCTATTTAGATGCACTTGATGCACTTTCTAGAACTGCATCAGCCTATATGAACTGTAGTGTAAGTGGTTTAAGTGGACTGGATGATCCAGATATCATACCCTCGGGAACTTTCTCAACAGATCCACAGACACGGGATTTCATGATGGGTCGGTTCTTGCCTGCAGCAAAAGCAATGGCTTCAGAAACACCTCATAATGCTCCTAGGAAGCAACCAGTGGCTAGAGAGCAACCTATTTCCAAAGAGGAACCAAGAAGGGTGATAAAGGTAGTGACTGGGGATAAGCGGCATCAACTTAATCAATATAGGCCACTTTATGTTCGAGAAATAGCTGGGGACGCAAGTAAGGATGAAGGGATGAGAATGCCTGTGCAAGTACCCATTTCTTCTGTTCGTAGAGTGCACGGTAACTCTTCTTATGCTGGTTCTCACACTGAAGCTAAAGAAAAGCATGCCGGGAGTGGTGTATATAAACAAAGATTAATTAGTGGTGATCAAGAAGCTGGGCTGCATGAAGATAACATTGATTTGAAATGTGAATCCAACCAGACCAGTAACAGAAGTAATGGTCTGACATTAGATGGGTCATCAGTAAACAGGCGTCTGCAAGGTAGTGGCATATCACCCTACCGTAGGCAATGTTCTCAGTCTATCCTTCATGATGGAAAATGTTTTCTTGGTATTCCTGAGAAAGCTAAGAGTTCCAAGGAGACTAGTAGCTCGGATAAATATAGAAAAGGCCACAGGTTTCTGGAAATATTGGCTAGTGAGAATGCTGAATGGGAAGCGGGTTTAGGAAGTCCTGTGGTTGAGAAGACACTGTATGTTGATTCTGTACAGACAGTAAAATCTTCAAGTTCAAATTCATTTTCCTCAGATATAAAGGGCGAGGTGAAGGGACTTATTGATTACAGACGGAATGATTTGGACATTCCTGAAAGAAGTGGTGAAATGGAAGAAACTCCATTGGCAGAGTCTCCATGTCAAGATATTGAACACTTGCGGTATGTGAATGAGAAGGCAGTAGTTCAGTTTAAATGTTTGGACTTAGAAAACTCCAGTTTCCTGTCTTCTTCTGGCAAATCAACCGGTGATGTGCAACCAATCACAAGAAATGGTTCTCTACAGGATCAAAAGGATTGTAACAAACTGGCAATATCAAAAGTGGCCAACCAAGAGGCGTTTAATTTAGAAAGCCAACAGTTGGAGAATTCAGATGATCAAGAAAATTGCCACGGCCTTACTGAGGAATGTATTAGGTTGACAAGCGTGAATCTGGCTGATGAGGAGAACACGGATTTAGAAACCCAACAGCCTAAGACTTCAGGTACTGATGACATTTCTCATGGCCTAGTTCAAAATTCTATTACCTTGATCAGCTCGAAAGTGGCCCGGAAGGGGAAGATTGATTTAGAAAGTCAACGTCTTGTGAAACTTGGTAATCAAGGTAGTTCCCAGGGCAACAATGCACGATTACCTCTTGGACCTCCTTTACCAAAATCACCGTCAGAGTCTTGGCTAAAGCGTACCTTGCCTACCATTTCCTCCAGGAATTCATCTTCACAGTCATCTCTTGGTTCACGCATTTATACCAGCAGTCCGGTTTCTAAGGTATCCTCTCTCGATCCCAAGTGGGAGACGATTGTCAAAACTTCTAATGTGCATCACGGGCGTTCGCGGTTCTCTGAGGAACTTCTTACACCTATACCAGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF688

Protein Analysis

730

Amino Acids

80.07

Weight (kDa)

8.17

Isoelectric Point (pI)

52.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF688	PF05097	1 - 261	2.6e-75	Protein of unknown function (DUF688)
DUF688	PF05097	278 - 453	3e-17	Protein of unknown function (DUF688)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30990 AT2G30990 AT2G30990 AT2G30990 AT2G30990
fragaria_vesca	FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510
malus_domestica	MD09G1236600.v1.1 MD17G1266300.v1.1 MD17G1266400.v1.1
prunus_persica	Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1
pyrus_communis	pycom09g15510 pycom09g15520 pycom17g26590
rosa_chinensis	RchiOBHm_Chr2g0129801 RchiOBHm_Chr2g0129871 RchiOBHm_Chr7g0242591 RchiOBHm_Chr7g0242601
rosa_laevigata	RLG00000019104 RLG00000031611
rosa_multiflora	Rmu_sc0000650.1_g000026 Rmu_sc0007216.1_g000002
rosa_roxburghii	Rroxscaffold_2G00114300
rosa_rugosa	Rorug02G0289800 Rorug02G0289900 Rorug02G0290000 Rorug02G0290100 Rorug02G0290200
rosa_samantha	Rh2AG340700 Rh2AG341300 Rh2BG349100 Rh2CG328000 Rh2DG367400 Rh3CG154600 Rh3DG155700
rosa_wichuraiana	Rw2G027770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1678
AccI	GTMKAC	1 cut(s)	229
AccII	CGCG	1 cut(s)	2152
AciI	CCGC	4 cut(s)	760, 1262, 1477, 2152
AclWI	GGATC	5 cut(s)	252, 554, 590, 1611, 2093
AcoI	YGGCCR	2 cut(s)	29, 1641
AcsI	RAATTY	6 cut(s)	19, 201, 1336, 1684, 1834, 2026
AcuI	CTGAAG	3 cut(s)	639, 930, 1782
AcyI	GRCGYC	1 cut(s)	1075
AfaI	GTAC	5 cut(s)	334, 852, 1311, 1804, 2002
AfiI	CCNNNNNNNGG	5 cut(s)	357, 1107, 1678, 1720, 1872
AgeI	ACCGGT	1 cut(s)	1562
AgsI	TTSAA	7 cut(s)	19, 251, 1006, 1329, 1335, 1469, 1832
AhlI	ACTAGT	2 cut(s)	452, 1187
AjnI	CCWGG	4 cut(s)	205, 280, 1929, 2021
AjuI	GAANNNNNNNTTGG	2 cut(s)	296, 328
Alw21I	GWGCWC	1 cut(s)	879
Alw26I	GTCTC	7 cut(s)	40, 73, 295, 467, 1178, 1455, 2105
Alw44I	GTGCAC	1 cut(s)	875
AlwI	GGATC	5 cut(s)	252, 554, 590, 1611, 2093
AlwNI	CAGNNNCTG	2 cut(s)	80, 1805
Ama87I	CYCGRG	1 cut(s)	577
AoxI	GGCC	8 cut(s)	29, 254, 782, 1213, 1641, 1711, 1822, 1863
ApaLI	GTGCAC	1 cut(s)	875
ApeKI	GCWGC	3 cut(s)	341, 638, 982
ApoI	RAATTY	6 cut(s)	19, 201, 1336, 1684, 1834, 2026
ArsI	GACNNNNNNTTYG	2 cut(s)	1964, 1996
AseI	ATTAAT	1 cut(s)	956
AsiGI	ACCGGT	1 cut(s)	1562
Asp700I	GAANNNNTTC	1 cut(s)	1591
AspA2I	CCTAGG	1 cut(s)	677
AspS9I	GGNCC	4 cut(s)	158, 254, 1864, 1958
AsuC2I	CCSGG	3 cut(s)	174, 931, 1867
AsuHPI	GGTGA	8 cut(s)	479, 745, 977, 1089, 1378, 1433, 1577, 1968
AvaI	CYCGRG	1 cut(s)	577
AvaII	GGWCC	2 cut(s)	158, 1958
AvrII	CCTAGG	1 cut(s)	677
BaeGI	GKGCMC	1 cut(s)	879
BalI	TGGCCA	1 cut(s)	1643
BbsI	GAAGAC	4 cut(s)	101, 217, 1295, 1536
Bbv12I	GWGCWC	1 cut(s)	879
BbvI	GCAGC	3 cut(s)	328, 650, 969
BccI	CCATC	4 cut(s)	458, 613, 1049, 1130
BceAI	ACGGC	1 cut(s)	1726
BciT130I	CCWGG	4 cut(s)	207, 282, 1931, 2023
BciVI	GTATCC	1 cut(s)	2098
BclI	TGATCA	3 cut(s)	967, 1693, 1848
BcnI	CCSGG	3 cut(s)	174, 931, 1867
BcoDI	GTCTC	7 cut(s)	40, 73, 295, 467, 1178, 1455, 2105
BcuI	ACTAGT	2 cut(s)	452, 1187
BfaI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1826
BfmI	CTRYAG	3 cut(s)	529, 636, 1598
BfuI	GTATCC	1 cut(s)	2098
BisI	GCNGC	4 cut(s)	342, 639, 761, 983
BlnI	CCTAGG	1 cut(s)	677
BlsI	GCNGC	4 cut(s)	343, 640, 762, 984
Bme1390I	CCNGG	7 cut(s)	174, 207, 282, 931, 1867, 1931, 2023
Bme18I	GGWCC	2 cut(s)	158, 1958
BmeT110I	CYCGRG	1 cut(s)	577
BmgT120I	GGNCC	4 cut(s)	158, 254, 1864, 1958
BmiI	GGNNCC	1 cut(s)	723
BmrFI	CCNGG	7 cut(s)	174, 207, 282, 931, 1867, 1931, 2023
BmrI	ACTGGG	1 cut(s)	759
BmsI	GCATC	5 cut(s)	475, 484, 521, 772, 2146
BmuI	ACTGGG	1 cut(s)	759
BoxI	GACNNNNGTC	1 cut(s)	2117
BpiI	GAAGAC	4 cut(s)	101, 217, 1295, 1536
BpmI	CTGGAG	2 cut(s)	1516, 2005
BpuMI	CCSGG	3 cut(s)	174, 931, 1867
BsaHI	GRCGYC	1 cut(s)	1075
BsaI	GGTCTC	2 cut(s)	295, 467
BsaJI	CCNNGG	8 cut(s)	216, 393, 576, 677, 1179, 1708, 1929, 1930
BsaWI	WCCGGW	2 cut(s)	1562, 2074
Bsc4I	CCNNNNNNNGG	5 cut(s)	357, 1107, 1678, 1720, 1872
Bse118I	RCCGGY	2 cut(s)	27, 1562
Bse1I	ACTGG	8 cut(s)	161, 372, 558, 689, 754, 1026, 1533, 1629
Bse3DI	GCAATG	2 cut(s)	654, 1118
BseBI	CCWGG	4 cut(s)	207, 282, 1931, 2023
BseDI	CCNNGG	8 cut(s)	216, 393, 576, 677, 1179, 1708, 1929, 1930
BseGI	GGATG	4 cut(s)	469, 562, 829, 837
BseLI	CCNNNNNNNGG	5 cut(s)	357, 1107, 1678, 1720, 1872
BseMI	GCAATG	2 cut(s)	654, 1118
BseMII	CTCAG	7 cut(s)	69, 87, 1133, 1152, 1362, 1710, 2151
BseNI	ACTGG	8 cut(s)	161, 372, 558, 689, 754, 1026, 1533, 1629
BseRI	GAGGAG	4 cut(s)	61, 114, 458, 1775
BseSI	GKGCMC	1 cut(s)	879
BseXI	GCAGC	3 cut(s)	328, 650, 969
BseYI	CCCAGC	2 cut(s)	806, 977
Bsh1236I	CGCG	1 cut(s)	2152
BshFI	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1824, 1865
BshTI	ACCGGT	1 cut(s)	1562
BsiHKAI	GWGCWC	1 cut(s)	879
BsiHKCI	CYCGRG	1 cut(s)	577
BsiSI	CCGG	6 cut(s)	28, 173, 930, 1563, 1867, 2075
BslFI	GGGAC	2 cut(s)	824, 1386
BslI	CCNNNNNNNGG	5 cut(s)	357, 1107, 1678, 1720, 1872
BsmAI	GTCTC	7 cut(s)	40, 73, 295, 467, 1178, 1455, 2105
BsmBI	CGTCTC	2 cut(s)	40, 2105
BsmFI	GGGAC	2 cut(s)	824, 1386
BsmI	GAATGC	2 cut(s)	843, 1252
BsnI	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1824, 1865
Bso31I	GGTCTC	2 cut(s)	295, 467
BsoBI	CYCGRG	1 cut(s)	577
Bsp1286I	GDGCHC	1 cut(s)	879
Bsp1407I	TGTACA	1 cut(s)	1309
Bsp143I	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1848, 2098
BspACI	CCGC	4 cut(s)	760, 1262, 1477, 2152
BspANI	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1824, 1865
BspCNI	CTCAG	7 cut(s)	68, 86, 1132, 1153, 1361, 1711, 2152
BspFNI	CGCG	1 cut(s)	2152
BspHI	TCATGA	2 cut(s)	615, 1132
BspLI	GGNNCC	1 cut(s)	723
BspMAI	CTGCAG	1 cut(s)	640
BspPI	GGATC	5 cut(s)	252, 554, 590, 1611, 2093
BspTNI	GGTCTC	2 cut(s)	295, 467
BsrDI	GCAATG	2 cut(s)	654, 1118
BsrFI	RCCGGY	2 cut(s)	27, 1562
BsrGI	TGTACA	1 cut(s)	1309
BsrI	ACTGG	8 cut(s)	161, 372, 558, 689, 754, 1026, 1533, 1629
BssAI	RCCGGY	2 cut(s)	27, 1562
BssECI	CCNNGG	8 cut(s)	216, 393, 576, 677, 1179, 1708, 1929, 1930
BssMI	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1848, 2098
BssNAI	GTATAC	1 cut(s)	230
BssNI	GRCGYC	1 cut(s)	1075
BssT1I	CCWWGG	4 cut(s)	216, 393, 677, 1179
Bst1107I	GTATAC	1 cut(s)	230
Bst2UI	CCWGG	4 cut(s)	207, 282, 1931, 2023
Bst6I	CTCTTC	2 cut(s)	132, 892
BstACI	GRCGYC	1 cut(s)	1075
BstAPI	GCANNNNNTGC	1 cut(s)	494
BstAUI	TGTACA	1 cut(s)	1309
BstC8I	GCNNGC	2 cut(s)	636, 927
BstDSI	CCRYGG	1 cut(s)	1708
BstENI	CCTNNNNNAGG	2 cut(s)	1105, 1718
BstF5I	GGATG	4 cut(s)	469, 562, 829, 837
BstFNI	CGCG	1 cut(s)	2152
BstKTI	GATC	8 cut(s)	247, 562, 598, 970, 1606, 1696, 1851, 2101
BstMAI	GTCTC	7 cut(s)	40, 73, 295, 467, 1178, 1455, 2105
BstMBI	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1848, 2098
BstMWI	GCNNNNNNNGC	5 cut(s)	494, 644, 812, 2005, 2143
BstNI	CCWGG	4 cut(s)	207, 282, 1931, 2023
BstNSI	RCATGY	1 cut(s)	929
BstPAI	GACNNNNGTC	1 cut(s)	2117
BstSCI	CCNGG	7 cut(s)	172, 205, 280, 929, 1865, 1929, 2021
BstSFI	CTRYAG	3 cut(s)	529, 636, 1598
BstSLI	GKGCMC	1 cut(s)	879
BstUI	CGCG	1 cut(s)	2152
BstV1I	GCAGC	3 cut(s)	328, 650, 969
BstV2I	GAAGAC	4 cut(s)	101, 217, 1295, 1536
BstX2I	RGATCY	2 cut(s)	244, 595
BstYI	RGATCY	2 cut(s)	244, 595
BstZ17I	GTATAC	1 cut(s)	230
BsuI	GTATCC	1 cut(s)	2098
BsuRI	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1824, 1865
BtgI	CCRYGG	1 cut(s)	1708
BtsCI	GGATG	4 cut(s)	469, 562, 829, 837
BtsIMutI	CAGTG	4 cut(s)	168, 696, 906, 1292
Cac8I	GCNNGC	2 cut(s)	636, 927
CaiI	CAGNNNCTG	2 cut(s)	80, 1805
CciI	TCATGA	2 cut(s)	615, 1132
Cfr10I	RCCGGY	2 cut(s)	27, 1562
Cfr13I	GGNCC	4 cut(s)	158, 254, 1864, 1958
CseI	GACGC	2 cut(s)	821, 1064
Csp6I	GTAC	5 cut(s)	333, 851, 1310, 1803, 2001
CspAI	ACCGGT	1 cut(s)	1562
CviAII	CATG	6 cut(s)	616, 926, 986, 1133, 1455, 1820
CviQI	GTAC	5 cut(s)	333, 851, 1310, 1803, 2001
DpnI	GATC	8 cut(s)	246, 561, 597, 969, 1605, 1695, 1850, 2100
DpnII	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1848, 2098
DraI	TTTAAA	1 cut(s)	1510
EaeI	YGGCCR	2 cut(s)	29, 1641
Eam1104I	CTCTTC	2 cut(s)	132, 892
EarI	CTCTTC	2 cut(s)	132, 892
Eco130I	CCWWGG	4 cut(s)	216, 393, 677, 1179
Eco31I	GGTCTC	2 cut(s)	295, 467
Eco32I	GATATC	1 cut(s)	568
Eco47I	GGWCC	2 cut(s)	158, 1958
Eco57I	CTGAAG	3 cut(s)	639, 930, 1782
Eco88I	CYCGRG	1 cut(s)	577
EcoNI	CCTNNNNNAGG	2 cut(s)	1105, 1718
EcoO109I	RGGNCCY	1 cut(s)	254
EcoRI	GAATTC	2 cut(s)	1684, 2026
EcoRII	CCWGG	4 cut(s)	205, 280, 1929, 2021
EcoRV	GATATC	1 cut(s)	568
EcoT14I	CCWWGG	4 cut(s)	216, 393, 677, 1179
ErhI	CCWWGG	4 cut(s)	216, 393, 677, 1179
Esp3I	CGTCTC	2 cut(s)	40, 2105
FaeI	CATG	6 cut(s)	619, 929, 989, 1136, 1458, 1823
FalI	AAGNNNNNCTT	2 cut(s)	1988, 2020
FaqI	GGGAC	2 cut(s)	824, 1386
FatI	CATG	6 cut(s)	615, 925, 985, 1132, 1454, 1819
FauI	CCCGC	1 cut(s)	1255
FbaI	TGATCA	3 cut(s)	967, 1693, 1848
FblI	GTMKAC	1 cut(s)	229
Fnu4HI	GCNGC	4 cut(s)	342, 639, 761, 983
FokI	GGATG	4 cut(s)	476, 569, 836, 844
Fsp4HI	GCNGC	4 cut(s)	342, 639, 761, 983
FspBI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1826
GluI	GCNGC	4 cut(s)	342, 639, 761, 983
GsaI	CCCAGC	2 cut(s)	810, 981
GsuI	CTGGAG	2 cut(s)	1516, 2005
HaeIII	GGCC	8 cut(s)	31, 256, 784, 1215, 1643, 1713, 1824, 1865
HapII	CCGG	6 cut(s)	28, 173, 930, 1563, 1867, 2075
HgaI	GACGC	2 cut(s)	821, 1064
Hin1I	GRCGYC	1 cut(s)	1075
Hin1II	CATG	6 cut(s)	619, 929, 989, 1136, 1458, 1823
HincII	GTYRAC	2 cut(s)	1737, 1895
HindII	GTYRAC	2 cut(s)	1737, 1895
HindIII	AAGCTT	2 cut(s)	272, 2187
HinfI	GANTC	6 cut(s)	169, 1013, 1304, 1448, 1747, 1985
HpaII	CCGG	6 cut(s)	28, 173, 930, 1563, 1867, 2075
HphI	GGTGA	8 cut(s)	479, 745, 977, 1089, 1378, 1433, 1577, 1968
Hpy166II	GTNNAC	7 cut(s)	230, 551, 877, 1069, 1737, 1895, 2054
Hpy8I	GTNNAC	7 cut(s)	230, 551, 877, 1069, 1737, 1895, 2054
HpyAV	CCTTC	9 cut(s)	245, 279, 433, 723, 821, 1139, 1363, 1486, 1864
HpyCH4IV	ACGT	2 cut(s)	49, 1897
HpyF10VI	GCNNNNNNNGC	5 cut(s)	494, 644, 812, 2005, 2143
HpySE526I	ACGT	2 cut(s)	49, 1897
Hsp92I	GRCGYC	1 cut(s)	1075
Hsp92II	CATG	6 cut(s)	619, 929, 989, 1136, 1458, 1823
Ksp22I	TGATCA	3 cut(s)	967, 1693, 1848
Kzo9I	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1848, 2098
LmnI	GCTCC	2 cut(s)	196, 679
Lsp1109I	GCAGC	3 cut(s)	328, 650, 969
LweI	GCATC	5 cut(s)	475, 484, 521, 772, 2146
MaeI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1826
MaeII	ACGT	2 cut(s)	49, 1897
MaeIII	GTNAC	4 cut(s)	745, 881, 1028, 1616
MalI	GATC	8 cut(s)	246, 561, 597, 969, 1605, 1695, 1850, 2100
MboI	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1848, 2098
MflI	RGATCY	2 cut(s)	244, 595
MhlI	GDGCHC	1 cut(s)	879
MlsI	TGGCCA	1 cut(s)	1643
MluCI	AATT	9 cut(s)	19, 201, 957, 1336, 1660, 1684, 1702, 1834, 2026
MluNI	TGGCCA	1 cut(s)	1643
MlyI	GAGTC	2 cut(s)	1457, 1994
MmeI	TCCRAC	3 cut(s)	294, 1041, 1659
Mox20I	TGGCCA	1 cut(s)	1643
MroXI	GAANNNNTTC	1 cut(s)	1591
MscI	TGGCCA	1 cut(s)	1643
MseI	TTAA	7 cut(s)	24, 300, 545, 771, 956, 1509, 1659
Msp20I	TGGCCA	1 cut(s)	1643
MspA1I	CMGCKG	1 cut(s)	341
MspI	CCGG	6 cut(s)	28, 173, 930, 1563, 1867, 2075
MspR9I	CCNGG	7 cut(s)	174, 207, 282, 931, 1867, 1931, 2023
Mva1269I	GAATGC	2 cut(s)	843, 1252
MvaI	CCWGG	4 cut(s)	207, 282, 1931, 2023
MvnI	CGCG	1 cut(s)	2152
MwoI	GCNNNNNNNGC	5 cut(s)	494, 644, 812, 2005, 2143
NciI	CCSGG	3 cut(s)	174, 931, 1867
NdeII	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1848, 2098
NlaIII	CATG	6 cut(s)	619, 929, 989, 1136, 1458, 1823
NlaIV	GGNNCC	1 cut(s)	723
NmuCI	GTSAC	1 cut(s)	745
NspI	RCATGY	1 cut(s)	929
PaeI	GCATGC	1 cut(s)	929
PagI	TCATGA	2 cut(s)	615, 1132
PasI	CCCWGGG	1 cut(s)	1930
PctI	GAATGC	2 cut(s)	843, 1252
PdmI	GAANNNNTTC	1 cut(s)	1591
PfeI	GAWTC	4 cut(s)	169, 1013, 1304, 1747
PflMI	CCANNNNNTGG	1 cut(s)	1678
PfoI	TCCNGGA	3 cut(s)	172, 205, 2021
PinAI	ACCGGT	1 cut(s)	1562
PkrI	GCNGC	4 cut(s)	343, 640, 762, 984
PleI	GAGTC	2 cut(s)	1456, 1993
PpsI	GAGTC	2 cut(s)	1456, 1993
PshAI	GACNNNNGTC	1 cut(s)	2117
PshBI	ATTAAT	1 cut(s)	956
Psp6I	CCWGG	4 cut(s)	205, 280, 1929, 2021
PspFI	CCCAGC	2 cut(s)	806, 977
PspGI	CCWGG	4 cut(s)	205, 280, 1929, 2021
PspN4I	GGNNCC	1 cut(s)	723
PspPI	GGNCC	4 cut(s)	158, 254, 1864, 1958
PsrI	GAACNNNNNNTAC	2 cut(s)	1099, 1131
PstI	CTGCAG	1 cut(s)	640
PstNI	CAGNNNCTG	2 cut(s)	80, 1805
PsuI	RGATCY	2 cut(s)	244, 595
PvuII	CAGCTG	1 cut(s)	341
RsaI	GTAC	5 cut(s)	334, 852, 1311, 1804, 2002
RsaNI	GTAC	5 cut(s)	333, 851, 1310, 1803, 2001
SaqAI	TTAA	7 cut(s)	24, 300, 545, 771, 956, 1509, 1659
SatI	GCNGC	4 cut(s)	342, 639, 761, 983
Sau3AI	GATC	8 cut(s)	244, 559, 595, 967, 1603, 1693, 1848, 2098
Sau96I	GGNCC	4 cut(s)	158, 254, 1864, 1958
SchI	GAGTC	2 cut(s)	1457, 1994
ScrFI	CCNGG	7 cut(s)	174, 207, 282, 931, 1867, 1931, 2023
SduI	GDGCHC	1 cut(s)	879
SfaNI	GCATC	5 cut(s)	475, 484, 521, 772, 2146
SfcI	CTRYAG	3 cut(s)	529, 636, 1598
SinI	GGWCC	2 cut(s)	158, 1958
SpeI	ACTAGT	2 cut(s)	452, 1187
SphI	GCATGC	1 cut(s)	929
Sse9I	AATT	9 cut(s)	19, 201, 957, 1336, 1660, 1684, 1702, 1834, 2026
SsiI	CCGC	4 cut(s)	760, 1262, 1477, 2152
SspI	AATATT	2 cut(s)	385, 1233
SspMI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1826
StyD4I	CCNGG	7 cut(s)	172, 205, 280, 929, 1865, 1929, 2021
StyI	CCWWGG	4 cut(s)	216, 393, 677, 1179
TaiI	ACGT	2 cut(s)	52, 1900
TaqI	TCGA	3 cut(s)	796, 1856, 2097
TasI	AATT	9 cut(s)	19, 201, 957, 1336, 1660, 1684, 1702, 1834, 2026
TatI	WGTACW	1 cut(s)	1309
TauI	GCSGC	1 cut(s)	763
TfiI	GAWTC	4 cut(s)	169, 1013, 1304, 1747
Tru1I	TTAA	7 cut(s)	24, 300, 545, 771, 956, 1509, 1659
Tru9I	TTAA	7 cut(s)	24, 300, 545, 771, 956, 1509, 1659
TscAI	CASTG	4 cut(s)	168, 696, 913, 1299
TseFI	GTSAC	1 cut(s)	745
TseI	GCWGC	3 cut(s)	341, 638, 982
Tsp45I	GTSAC	1 cut(s)	745
TspDTI	ATGAA	8 cut(s)	435, 539, 604, 840, 1002, 1121, 1329, 2019
TspGWI	ACGGA	2 cut(s)	1405, 1784
TspRI	CASTG	4 cut(s)	168, 696, 913, 1299
Van91I	CCANNNNNTGG	1 cut(s)	1678
VneI	GTGCAC	1 cut(s)	875
VpaK11BI	GGWCC	2 cut(s)	158, 1958
VspI	ATTAAT	1 cut(s)	956
XagI	CCTNNNNNAGG	2 cut(s)	1105, 1718
XapI	RAATTY	6 cut(s)	19, 201, 1336, 1684, 1834, 2026
XbaI	TCTAGA	1 cut(s)	503
XceI	RCATGY	1 cut(s)	929
XmaJI	CCTAGG	1 cut(s)	677
XmiI	GTMKAC	1 cut(s)	229
XmnI	GAANNNNTTC	1 cut(s)	1591
XspI	CTAG	7 cut(s)	453, 504, 678, 696, 1188, 1239, 1826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.