Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0002485

Physical Location & Seq

Genomic Coordinates Reverse (-)

29859562 .. 29863813

Gene Structure 4252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1236600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGCTAAAGAATATGATGGAAGAGAAGCAGTTAGATCTTAATCAGCCACTTCTGTCTGTAAGACGATATTCACCTACAGTAGTCTCCTCAGAAGCTGATGACAAAAGGAAGGCTGATAAGTCACTGCCCAAGCTACCTCCTCTTCCATTTTACAAATCAGAATTGAAATCAGGTCCGGTGAGGCATCCAGGTACTGTTCCTTTTGTATGGGAGCAAATCCCCGGAAGACCCAAGGATGAAAGAAATTCACAAACTCAGGGTCTTGAACGGCCTGCCACTACACCGAGGCTTCCGCCTGGAAGGGTTTCAATTGCTAAGAAGCAAGCATTGGATAAAGGTTCTAAACGCACTACAGCTGCTCAATCCCCAACTGGACATGTACTTTCCAATTCTAAAAATGATTCAACCTTTGATACAAAAGAAGTTACTAAGTGTGACAGCTCTAAAGAGGGGATGGAGGATAAGGATATTTCCGATTCAGAGGATGGTGATGAGACCTATTTAGATGCACTTGACGCACTTTCGAGGAGTGAATCATTCTATTATAACTGTAGTGTAAGTGGTTTGAGTGGACTGGATGGTCCAGATGTCAAACCAACTGGAACCTTCTCGACAGATCCACAGACTCGCGATTTCATGATGGGTCGGTTCCTGCCTGCAGCAAAGGCTATGGCTTCAGAAACACCTCAATATAGTACCAGGAAGCAACCAGTTGCTCGAGAGCAACCAATTTGTCAAGAGCAACCAAGAGGGATGAAGGTCGCCAGTGGGAATAAGCAACATCCACTTAATCAATATAAGCCAAATGATTTGCCACATAATGTTCAAGATATAACTGGGGACAAAAGTGAGAATGAAGGTATGAGAGCACAAGCGCAATTACCCATTTCTTCAGTTAGGAGTGTGCGAGCTAAATCTTCCTATGCCAGTGCTTACAGAGAAGCTAAAAATGAGCATTCTGGGGGCGATGCTTGTGAACAAAGATTAATGAATGGACATCAGGAAGCTGTGATACCTAAAGATAAGAATGATTTGAAATGTGAATCCAACCAGATCACCAAAATAAGTGAATGTGAGAAATTAGATGGGTCACCTGTACACAGGCGTCACCAGGGTAGTAACATATCACCCTACCGAAAGGAATGTTTTCATCATGAAGAAAAAGGTTTTCTTGGTATTCCTGAAAAAGCAAAGAACTTCAGAGAAACTAGTAGCTCTGGAAAGTATCGAAAAGGCCACAACAATTTTAGGGAAATATTGGCTACTGAGAATATTGCTGAATGGAAAATGGGCCCAGGGAGTCCTGTAGTTGAGAAGACTCTGTATATTGATTCTGTGCATACTGTAAAATCTCCGAATTCAAATTCACATTCCTCAGATACAAAGGGCAATATCATTCAGTACAGAGGGAATGATAATGAAATTCCTGAGAAAAGTAATGAAGTGAAAGAAACCCCTTCGGCAGAGTTTTCACTCCAAGATATTGAGCACTTGGGTGATGGAAATGAGAAGGCTATAGTGCCGTTTCAAAGTTTGGAGTTTCCTGACTCCAGCTTTCTATATTGGTCTGGCAGATCCAGTAAGGATGATCAAACAGATATGAGAAACGGTTCCATATTCGATCAGGATTCCAGCAGATTTGCAAGCTTAAAAGTGGTTGACCAAGAAACAGTCAACTTGAAAAGCCAACATTTAGAGAAATCAGTTCACTGGAAAAATTGTAATGGCCTTACTCGGGACCTTATTACATCGACAATTGAAAAACTGAATGATGAGAAAAAGAGTGATTTAAAAGGCCAACAGCCTAGAAAATCAGGAACAGAAGAAAGTTCGCATAGCCATGGTCAGATTTCTATTACATTGACCAGCTCAAAAGTGGCCTACAGGGGAAAGATTGATTTAGAAAGTCGACGACTTGTGAAATTTGGTAATCAGGAAAGTGCCCGGGGCCACAATTCACGACTGCCTCTTGGACCACCTTTACCGAAATCTCCATCAGAGTCTTGGTTAAAGCGCACCTTACCTAGTATTTCCTCGAGGAGCTCGTCTTCACAGTATTCTTCTGGTTCACAGATTTATGCTAGTGGTCAGCCTTCAAAGACGTCCTCTCTTGATCCCAAATGGGAGACAATTGTTAAAACTTCTAACACACACCATGGACATTGGCGGTTTTCAGAGGACCTTCTGACACCTATACCGGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF688

Protein Analysis

736

Amino Acids

81.87

Weight (kDa)

8.47

Isoelectric Point (pI)

51.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF688	PF05097	6 - 285	2.5e-77	Protein of unknown function (DUF688)
DUF688	PF05097	287 - 462	2.6e-18	Protein of unknown function (DUF688)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30990 AT2G30990 AT2G30990 AT2G30990 AT2G30990
fragaria_vesca	FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510
malus_domestica	MD09G1236600.v1.1 MD17G1266300.v1.1 MD17G1266400.v1.1
prunus_persica	Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1
pyrus_communis	pycom09g15510 pycom09g15520 pycom17g26590
rosa_chinensis	RchiOBHm_Chr2g0129801 RchiOBHm_Chr2g0129871 RchiOBHm_Chr7g0242591 RchiOBHm_Chr7g0242601
rosa_laevigata	RLG00000019104 RLG00000031611
rosa_multiflora	Rmu_sc0000650.1_g000026 Rmu_sc0007216.1_g000002
rosa_roxburghii	Rroxscaffold_2G00114300
rosa_rugosa	Rorug02G0289800 Rorug02G0289900 Rorug02G0290000 Rorug02G0290100 Rorug02G0290200
rosa_samantha	Rh2AG340700 Rh2AG341300 Rh2BG349100 Rh2CG328000 Rh2DG367400 Rh3CG154600 Rh3DG155700
rosa_wichuraiana	Rw2G027770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	546
AasI	GACNNNNNNGTC	1 cut(s)	579
AatII	GACGTC	1 cut(s)	2105
AbsI	CCTCGAGG	1 cut(s)	2035
AccI	GTMKAC	1 cut(s)	1909
AccII	CGCG	1 cut(s)	630
AciI	CCGC	2 cut(s)	293, 2167
AclWI	GGATC	3 cut(s)	611, 1569, 2108
AcsI	RAATTY	5 cut(s)	244, 1357, 1363, 1422, 1922
AcuI	CTGAAG	3 cut(s)	660, 876, 1183
AcyI	GRCGYC	2 cut(s)	1105, 2102
AfaI	GTAC	5 cut(s)	193, 381, 697, 1098, 1403
AfiI	CCNNNNNNNGG	1 cut(s)	1735
AflIII	ACRYGT	1 cut(s)	376
AhlI	ACTAGT	1 cut(s)	1208
AjnI	CCWGG	5 cut(s)	187, 295, 698, 1110, 1294
AjuI	GAANNNNNNNTTGG	2 cut(s)	311, 343
AleI	CACNNNNGTG	1 cut(s)	1494
Alw21I	GWGCWC	3 cut(s)	871, 1491, 2045
Alw26I	GTCTC	3 cut(s)	88, 488, 2120
AlwI	GGATC	3 cut(s)	611, 1569, 2108
AlwNI	CAGNNNCTG	2 cut(s)	95, 194
Ama87I	CYCGRG	4 cut(s)	717, 1734, 1944, 2035
AoxI	GGCC	7 cut(s)	269, 1234, 1291, 1726, 1795, 1878, 1948
ApaI	GGGCCC	1 cut(s)	1295
ApeKI	GCWGC	2 cut(s)	356, 659
ApoI	RAATTY	5 cut(s)	244, 1357, 1363, 1422, 1922
ArsI	GACNNNNNNTTYG	2 cut(s)	244, 276
AseI	ATTAAT	1 cut(s)	986
Asp700I	GAANNNNTTC	3 cut(s)	304, 1146, 1609
AspLEI	GCGC	2 cut(s)	877, 2016
AspS9I	GGNCC	8 cut(s)	173, 581, 1291, 1292, 1738, 1948, 1973, 2179
AsuC2I	CCSGG	3 cut(s)	222, 1945, 1946
AsuHPI	GGTGA	8 cut(s)	63, 190, 500, 1048, 1083, 1100, 1119, 1508
AvaI	CYCGRG	4 cut(s)	717, 1734, 1944, 2035
AvaII	GGWCC	5 cut(s)	173, 581, 1738, 1973, 2179
BaeGI	GKGCMC	2 cut(s)	1295, 1945
BanII	GRGCYC	2 cut(s)	1295, 2045
BarI	GAAGNNNNNNTAC	2 cut(s)	996, 1028
BbsI	GAAGAC	3 cut(s)	232, 1322, 2040
Bbv12I	GWGCWC	3 cut(s)	871, 1491, 2045
BbvI	GCAGC	2 cut(s)	343, 671
BccI	CCATC	8 cut(s)	10, 448, 479, 572, 634, 1079, 1493, 2002
BceAI	ACGGC	2 cut(s)	284, 1507
BciT130I	CCWGG	5 cut(s)	189, 297, 700, 1112, 1296
BclI	TGATCA	1 cut(s)	1588
BcnI	CCSGG	3 cut(s)	222, 1945, 1946
BcoDI	GTCTC	3 cut(s)	88, 488, 2120
BcuI	ACTAGT	1 cut(s)	1208
BfaI	CTAG	4 cut(s)	1209, 1806, 2025, 2082
BfmI	CTRYAG	7 cut(s)	75, 351, 550, 657, 1305, 1515, 1882
BglII	AGATCT	1 cut(s)	34
BisI	GCNGC	2 cut(s)	357, 660
BlsI	GCNGC	2 cut(s)	358, 661
Bme1390I	CCNGG	8 cut(s)	189, 222, 297, 700, 1112, 1296, 1945, 1946
Bme18I	GGWCC	5 cut(s)	173, 581, 1738, 1973, 2179
BmeT110I	CYCGRG	4 cut(s)	717, 1734, 1944, 2035
BmgT120I	GGNCC	8 cut(s)	173, 581, 1291, 1292, 1738, 1948, 1973, 2179
BmiI	GGNNCC	6 cut(s)	604, 650, 1293, 1612, 1739, 1949
BmrFI	CCNGG	8 cut(s)	189, 222, 297, 700, 1112, 1296, 1945, 1946
BmrI	ACTGGG	1 cut(s)	846
BmsI	GCATC	3 cut(s)	193, 496, 958
BmuI	ACTGGG	1 cut(s)	846
BpiI	GAAGAC	3 cut(s)	232, 1322, 2040
BpmI	CTGGAG	1 cut(s)	1534
BpuMI	CCSGG	3 cut(s)	222, 1945, 1946
BsaBI	GATNNNNATC	1 cut(s)	39
BsaHI	GRCGYC	2 cut(s)	1105, 2102
BsaI	GGTCTC	1 cut(s)	488
BsaWI	WCCGGW	2 cut(s)	175, 2197
Bsc4I	CCNNNNNNNGG	1 cut(s)	1735
Bse1I	ACTGG	9 cut(s)	376, 579, 604, 710, 765, 841, 927, 1578, 1715
Bse8I	GATNNNNATC	1 cut(s)	39
BseBI	CCWGG	5 cut(s)	189, 297, 700, 1112, 1296
BseGI	GGATG	8 cut(s)	184, 241, 459, 490, 583, 759, 781, 1591
BseJI	GATNNNNATC	1 cut(s)	39
BseLI	CCNNNNNNNGG	1 cut(s)	1735
BseMII	CTCAG	5 cut(s)	102, 269, 1257, 1389, 1419
BseNI	ACTGG	9 cut(s)	376, 579, 604, 710, 765, 841, 927, 1578, 1715
BseRI	GAGGAG	4 cut(s)	76, 129, 541, 2053
BseSI	GKGCMC	2 cut(s)	1295, 1945
BseXI	GCAGC	2 cut(s)	343, 671
Bsh1236I	CGCG	1 cut(s)	630
BshFI	GGCC	7 cut(s)	271, 1236, 1293, 1728, 1797, 1880, 1950
BsiHKAI	GWGCWC	3 cut(s)	871, 1491, 2045
BsiHKCI	CYCGRG	4 cut(s)	717, 1734, 1944, 2035
BsiSI	CCGG	4 cut(s)	176, 222, 1945, 2198
BslFI	GGGAC	2 cut(s)	854, 1751
BslI	CCNNNNNNNGG	1 cut(s)	1735
BsmAI	GTCTC	3 cut(s)	88, 488, 2120
BsmFI	GGGAC	2 cut(s)	854, 1751
BsmI	GAATGC	1 cut(s)	955
BsnI	GGCC	7 cut(s)	271, 1236, 1293, 1728, 1797, 1880, 1950
Bso31I	GGTCTC	1 cut(s)	488
BsoBI	CYCGRG	4 cut(s)	717, 1734, 1944, 2035
Bsp120I	GGGCCC	1 cut(s)	1291
Bsp1286I	GDGCHC	5 cut(s)	871, 1295, 1491, 1945, 2045
Bsp1407I	TGTACA	1 cut(s)	1096
Bsp143I	GATC	7 cut(s)	34, 616, 1053, 1574, 1588, 1621, 2113
Bsp19I	CCATGG	2 cut(s)	1840, 2155
Bsp68I	TCGCGA	1 cut(s)	630
BspACI	CCGC	2 cut(s)	293, 2167
BspANI	GGCC	7 cut(s)	271, 1236, 1293, 1728, 1797, 1880, 1950
BspCNI	CTCAG	5 cut(s)	101, 268, 1258, 1388, 1420
BspFNI	CGCG	1 cut(s)	630
BspHI	TCATGA	2 cut(s)	636, 1153
BspLI	GGNNCC	6 cut(s)	604, 650, 1293, 1612, 1739, 1949
BspMAI	CTGCAG	1 cut(s)	661
BspPI	GGATC	3 cut(s)	611, 1569, 2108
BspTNI	GGTCTC	1 cut(s)	488
BsrGI	TGTACA	1 cut(s)	1096
BsrI	ACTGG	9 cut(s)	376, 579, 604, 710, 765, 841, 927, 1578, 1715
BssMI	GATC	7 cut(s)	34, 616, 1053, 1574, 1588, 1621, 2113
BssNI	GRCGYC	2 cut(s)	1105, 2102
BssT1I	CCWWGG	3 cut(s)	231, 1840, 2155
Bst2UI	CCWGG	5 cut(s)	189, 297, 700, 1112, 1296
Bst4CI	ACNGT	7 cut(s)	79, 196, 551, 1345, 1610, 1672, 2055
Bst6I	CTCTTC	2 cut(s)	15, 147
BstACI	GRCGYC	2 cut(s)	1105, 2102
BstAUI	TGTACA	1 cut(s)	1096
BstC8I	GCNNGC	5 cut(s)	273, 324, 657, 909, 1645
BstDEI	CTNAG	8 cut(s)	88, 255, 315, 429, 1266, 1375, 1428, 2205
BstDSI	CCRYGG	2 cut(s)	1840, 2155
BstEII	GGTNACC	1 cut(s)	1089
BstF5I	GGATG	8 cut(s)	184, 241, 459, 490, 583, 759, 781, 1591
BstFNI	CGCG	1 cut(s)	630
BstHHI	GCGC	2 cut(s)	877, 2016
BstKTI	GATC	7 cut(s)	37, 619, 1056, 1577, 1591, 1624, 2116
BstMAI	GTCTC	3 cut(s)	88, 488, 2120
BstMBI	GATC	7 cut(s)	34, 616, 1053, 1574, 1588, 1621, 2113
BstMWI	GCNNNNNNNGC	2 cut(s)	515, 665
BstNI	CCWGG	5 cut(s)	189, 297, 700, 1112, 1296
BstNSI	RCATGY	1 cut(s)	380
BstPI	GGTNACC	1 cut(s)	1089
BstSCI	CCNGG	8 cut(s)	187, 220, 295, 698, 1110, 1294, 1943, 1944
BstSFI	CTRYAG	7 cut(s)	75, 351, 550, 657, 1305, 1515, 1882
BstSLI	GKGCMC	2 cut(s)	1295, 1945
BstUI	CGCG	1 cut(s)	630
BstV1I	GCAGC	2 cut(s)	343, 671
BstV2I	GAAGAC	3 cut(s)	232, 1322, 2040
BstX2I	RGATCY	3 cut(s)	34, 616, 1574
BstYI	RGATCY	3 cut(s)	34, 616, 1574
BsuRI	GGCC	7 cut(s)	271, 1236, 1293, 1728, 1797, 1880, 1950
BtgI	CCRYGG	2 cut(s)	1840, 2155
BtgZI	GCGATG	1 cut(s)	981
BtsCI	GGATG	8 cut(s)	184, 241, 459, 490, 583, 759, 781, 1591
BtsI	GCAGTG	1 cut(s)	122
BtsIMutI	CAGTG	4 cut(s)	122, 772, 934, 1708
BtuMI	TCGCGA	1 cut(s)	630
Cac8I	GCNNGC	5 cut(s)	273, 324, 657, 909, 1645
CaiI	CAGNNNCTG	2 cut(s)	95, 194
CciI	TCATGA	2 cut(s)	636, 1153
CfoI	GCGC	2 cut(s)	877, 2016
Cfr13I	GGNCC	8 cut(s)	173, 581, 1291, 1292, 1738, 1948, 1973, 2179
Cfr9I	CCCGGG	1 cut(s)	1944
CseI	GACGC	2 cut(s)	524, 1094
Csp6I	GTAC	5 cut(s)	192, 380, 696, 1097, 1402
CviAII	CATG	5 cut(s)	377, 637, 1154, 1841, 2156
CviQI	GTAC	5 cut(s)	192, 380, 696, 1097, 1402
DdeI	CTNAG	8 cut(s)	88, 255, 315, 429, 1266, 1375, 1428, 2205
DpnI	GATC	7 cut(s)	36, 618, 1055, 1576, 1590, 1623, 2115
DpnII	GATC	7 cut(s)	34, 616, 1053, 1574, 1588, 1621, 2113
DraI	TTTAAA	1 cut(s)	1791
DrdI	GACNNNNNNGTC	1 cut(s)	579
DseDI	GACNNNNNNGTC	1 cut(s)	579
Eam1104I	CTCTTC	2 cut(s)	15, 147
EarI	CTCTTC	2 cut(s)	15, 147
EciI	GGCGGA	1 cut(s)	282
Ecl136II	GAGCTC	1 cut(s)	2043
Eco130I	CCWWGG	3 cut(s)	231, 1840, 2155
Eco24I	GRGCYC	2 cut(s)	1295, 2045
Eco31I	GGTCTC	1 cut(s)	488
Eco47I	GGWCC	5 cut(s)	173, 581, 1738, 1973, 2179
Eco53kI	GAGCTC	1 cut(s)	2043
Eco57I	CTGAAG	3 cut(s)	660, 876, 1183
Eco88I	CYCGRG	4 cut(s)	717, 1734, 1944, 2035
Eco91I	GGTNACC	1 cut(s)	1089
EcoICRI	GAGCTC	1 cut(s)	2043
EcoO109I	RGGNCCY	2 cut(s)	1738, 2179
EcoO65I	GGTNACC	1 cut(s)	1089
EcoRI	GAATTC	1 cut(s)	1357
EcoRII	CCWGG	5 cut(s)	187, 295, 698, 1110, 1294
EcoT14I	CCWWGG	3 cut(s)	231, 1840, 2155
EcoT38I	GRGCYC	2 cut(s)	1295, 2045
ErhI	CCWWGG	3 cut(s)	231, 1840, 2155
FaeI	CATG	5 cut(s)	380, 640, 1157, 1844, 2159
FalI	AAGNNNNNCTT	4 cut(s)	1155, 1187, 2003, 2035
FaqI	GGGAC	2 cut(s)	854, 1751
FatI	CATG	5 cut(s)	376, 636, 1153, 1840, 2155
FbaI	TGATCA	1 cut(s)	1588
FblI	GTMKAC	1 cut(s)	1909
Fnu4HI	GCNGC	2 cut(s)	357, 660
FokI	GGATG	8 cut(s)	171, 248, 466, 497, 590, 766, 768, 1598
FriOI	GRGCYC	2 cut(s)	1295, 2045
Fsp4HI	GCNGC	2 cut(s)	357, 660
FspBI	CTAG	4 cut(s)	1209, 1806, 2025, 2082
GlaI	GCGC	2 cut(s)	876, 2015
GluI	GCNGC	2 cut(s)	357, 660
GsuI	CTGGAG	1 cut(s)	1534
HaeIII	GGCC	7 cut(s)	271, 1236, 1293, 1728, 1797, 1880, 1950
HapII	CCGG	4 cut(s)	176, 222, 1945, 2198
HgaI	GACGC	2 cut(s)	524, 1094
HhaI	GCGC	2 cut(s)	877, 2016
Hin1I	GRCGYC	2 cut(s)	1105, 2102
Hin1II	CATG	5 cut(s)	380, 640, 1157, 1844, 2159
Hin6I	GCGC	2 cut(s)	875, 2014
HinP1I	GCGC	2 cut(s)	875, 2014
HincII	GTYRAC	3 cut(s)	1660, 1675, 1910
HindII	GTYRAC	3 cut(s)	1660, 1675, 1910
HindIII	AAGCTT	2 cut(s)	1645, 2202
HpaII	CCGG	4 cut(s)	176, 222, 1945, 2198
HphI	GGTGA	8 cut(s)	63, 190, 500, 1048, 1083, 1100, 1119, 1508
Hpy166II	GTNNAC	8 cut(s)	572, 977, 1099, 1660, 1675, 1708, 1910, 2069
Hpy8I	GTNNAC	8 cut(s)	572, 977, 1099, 1660, 1675, 1708, 1910, 2069
Hpy99I	CGWCG	1 cut(s)	1914
HpyAV	CCTTC	9 cut(s)	103, 294, 616, 751, 851, 1467, 1504, 2103, 2192
HpyCH4III	ACNGT	7 cut(s)	79, 196, 551, 1345, 1610, 1672, 2055
HpyCH4IV	ACGT	1 cut(s)	2102
HpyCH4V	TGCA	4 cut(s)	509, 659, 1339, 1643
HpyF10VI	GCNNNNNNNGC	2 cut(s)	515, 665
HpyF3I	CTNAG	8 cut(s)	88, 255, 315, 429, 1266, 1375, 1428, 2205
HpySE526I	ACGT	1 cut(s)	2102
Hsp92I	GRCGYC	2 cut(s)	1105, 2102
Hsp92II	CATG	5 cut(s)	380, 640, 1157, 1844, 2159
HspAI	GCGC	2 cut(s)	875, 2014
Ksp22I	TGATCA	1 cut(s)	1588
Kzo9I	GATC	7 cut(s)	34, 616, 1053, 1574, 1588, 1621, 2113
LmnI	GCTCC	2 cut(s)	211, 2040
Lsp1109I	GCAGC	2 cut(s)	343, 671
LweI	GCATC	3 cut(s)	193, 496, 958
MaeI	CTAG	4 cut(s)	1209, 1806, 2025, 2082
MaeII	ACGT	1 cut(s)	2102
MaeIII	GTNAC	6 cut(s)	120, 424, 434, 1089, 1106, 1118
MalI	GATC	7 cut(s)	36, 618, 1055, 1576, 1590, 1623, 2115
MboI	GATC	7 cut(s)	34, 616, 1053, 1574, 1588, 1621, 2113
MfeI	CAATTG	3 cut(s)	309, 1755, 2130
MflI	RGATCY	3 cut(s)	34, 616, 1574
MhlI	GDGCHC	5 cut(s)	871, 1295, 1491, 1945, 2045
MlyI	GAGTC	5 cut(s)	619, 1309, 1312, 1541, 2009
MmeI	TCCRAC	1 cut(s)	1071
MroXI	GAANNNNTTC	3 cut(s)	304, 1146, 1609
MseI	TTAA	7 cut(s)	39, 789, 986, 1649, 1790, 2009, 2136
MslI	CAYNNNNRTG	2 cut(s)	1494, 1839
MspA1I	CMGCKG	1 cut(s)	356
MspI	CCGG	4 cut(s)	176, 222, 1945, 2198
MspR9I	CCNGG	8 cut(s)	189, 222, 297, 700, 1112, 1296, 1945, 1946
MunI	CAATTG	3 cut(s)	309, 1755, 2130
Mva1269I	GAATGC	1 cut(s)	955
MvaI	CCWGG	5 cut(s)	189, 297, 700, 1112, 1296
MvnI	CGCG	1 cut(s)	630
MwoI	GCNNNNNNNGC	2 cut(s)	515, 665
NciI	CCSGG	3 cut(s)	222, 1945, 1946
NcoI	CCATGG	2 cut(s)	1840, 2155
NdeII	GATC	7 cut(s)	34, 616, 1053, 1574, 1588, 1621, 2113
NlaIII	CATG	5 cut(s)	380, 640, 1157, 1844, 2159
NlaIV	GGNNCC	6 cut(s)	604, 650, 1293, 1612, 1739, 1949
NmuCI	GTSAC	4 cut(s)	120, 434, 1089, 1106
NruI	TCGCGA	1 cut(s)	630
NspI	RCATGY	1 cut(s)	380
OliI	CACNNNNGTG	1 cut(s)	1494
PaeR7I	CTCGAG	2 cut(s)	717, 2035
PagI	TCATGA	2 cut(s)	636, 1153
PasI	CCCWGGG	1 cut(s)	1295
PciI	ACATGT	1 cut(s)	376
PcsI	WCGNNNNNNNCGW	1 cut(s)	2042
PctI	GAATGC	1 cut(s)	955
PdmI	GAANNNNTTC	3 cut(s)	304, 1146, 1609
PfeI	GAWTC	6 cut(s)	401, 476, 533, 1043, 1331, 1628
PkrI	GCNGC	2 cut(s)	358, 661
PleI	GAGTC	5 cut(s)	619, 1308, 1312, 1541, 2008
PpsI	GAGTC	5 cut(s)	619, 1308, 1312, 1541, 2008
PpuMI	RGGWCCY	2 cut(s)	1738, 2179
PscI	ACATGT	1 cut(s)	376
PshBI	ATTAAT	1 cut(s)	986
PsiI	TTATAA	1 cut(s)	546
Psp124BI	GAGCTC	1 cut(s)	2045
Psp5II	RGGWCCY	2 cut(s)	1738, 2179
Psp6I	CCWGG	5 cut(s)	187, 295, 698, 1110, 1294
PspEI	GGTNACC	1 cut(s)	1089
PspGI	CCWGG	5 cut(s)	187, 295, 698, 1110, 1294
PspN4I	GGNNCC	6 cut(s)	604, 650, 1293, 1612, 1739, 1949
PspOMI	GGGCCC	1 cut(s)	1291
PspPI	GGNCC	8 cut(s)	173, 581, 1291, 1292, 1738, 1948, 1973, 2179
PspPPI	RGGWCCY	2 cut(s)	1738, 2179
PspXI	VCTCGAGB	1 cut(s)	2035
PstI	CTGCAG	1 cut(s)	661
PstNI	CAGNNNCTG	2 cut(s)	95, 194
PsuI	RGATCY	3 cut(s)	34, 616, 1574
PvuII	CAGCTG	1 cut(s)	356
RruI	TCGCGA	1 cut(s)	630
RsaI	GTAC	5 cut(s)	193, 381, 697, 1098, 1403
RsaNI	GTAC	5 cut(s)	192, 380, 696, 1097, 1402
RseI	CAYNNNNRTG	2 cut(s)	1494, 1839
SacI	GAGCTC	1 cut(s)	2045
SalI	GTCGAC	1 cut(s)	1908
SaqAI	TTAA	7 cut(s)	39, 789, 986, 1649, 1790, 2009, 2136
SatI	GCNGC	2 cut(s)	357, 660
Sau3AI	GATC	7 cut(s)	34, 616, 1053, 1574, 1588, 1621, 2113
Sau96I	GGNCC	8 cut(s)	173, 581, 1291, 1292, 1738, 1948, 1973, 2179
SchI	GAGTC	5 cut(s)	619, 1309, 1312, 1541, 2009
ScrFI	CCNGG	8 cut(s)	189, 222, 297, 700, 1112, 1296, 1945, 1946
SduI	GDGCHC	5 cut(s)	871, 1295, 1491, 1945, 2045
SfaNI	GCATC	3 cut(s)	193, 496, 958
SfcI	CTRYAG	7 cut(s)	75, 351, 550, 657, 1305, 1515, 1882
Sfr274I	CTCGAG	2 cut(s)	717, 2035
SinI	GGWCC	5 cut(s)	173, 581, 1738, 1973, 2179
SlaI	CTCGAG	2 cut(s)	717, 2035
SmaI	CCCGGG	1 cut(s)	1946
SmiMI	CAYNNNNRTG	2 cut(s)	1494, 1839
SmlI	CTYRAG	2 cut(s)	717, 2035
SmoI	CTYRAG	2 cut(s)	717, 2035
SpeI	ACTAGT	1 cut(s)	1208
SsiI	CCGC	2 cut(s)	293, 2167
SspI	AATATT	2 cut(s)	1257, 1273
SspMI	CTAG	4 cut(s)	1209, 1806, 2025, 2082
SstI	GAGCTC	1 cut(s)	2045
StyD4I	CCNGG	8 cut(s)	187, 220, 295, 698, 1110, 1294, 1943, 1944
StyI	CCWWGG	3 cut(s)	231, 1840, 2155
TaaI	ACNGT	7 cut(s)	79, 196, 551, 1345, 1610, 1672, 2055
TaiI	ACGT	1 cut(s)	2105
TaqI	TCGA	8 cut(s)	524, 611, 718, 1228, 1620, 1751, 1909, 2036
TatI	WGTACW	3 cut(s)	379, 1096, 1401
TfiI	GAWTC	6 cut(s)	401, 476, 533, 1043, 1331, 1628
Tru1I	TTAA	7 cut(s)	39, 789, 986, 1649, 1790, 2009, 2136
Tru9I	TTAA	7 cut(s)	39, 789, 986, 1649, 1790, 2009, 2136
TscAI	CASTG	4 cut(s)	129, 772, 934, 1715
TseFI	GTSAC	4 cut(s)	120, 434, 1089, 1106
TseI	GCWGC	2 cut(s)	356, 659
Tsp45I	GTSAC	4 cut(s)	120, 434, 1089, 1106
TspDTI	ATGAA	9 cut(s)	252, 625, 770, 870, 1004, 1139, 1170, 1434, 1455
TspMI	CCCGGG	1 cut(s)	1944
TspRI	CASTG	4 cut(s)	129, 772, 934, 1715
VpaK11BI	GGWCC	5 cut(s)	173, 581, 1738, 1973, 2179
VspI	ATTAAT	1 cut(s)	986
XapI	RAATTY	5 cut(s)	244, 1357, 1363, 1422, 1922
XceI	RCATGY	1 cut(s)	380
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1873, 2001
XhoI	CTCGAG	2 cut(s)	717, 2035
XmaI	CCCGGG	1 cut(s)	1944
XmiI	GTMKAC	1 cut(s)	1909
XmnI	GAANNNNTTC	3 cut(s)	304, 1146, 1609
XspI	CTAG	4 cut(s)	1209, 1806, 2025, 2082
ZraI	GACGTC	1 cut(s)	2103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.