Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002485

Physical Location & Seq

Genomic Coordinates Reverse (-)

40193959 .. 40198133

Gene Structure 4175 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00114300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGGACGAGAAGCAGTTGAATTTTAACCGGCCACTTCTATCTGTGAGACGTTTCTCAGCGACAACTGTCTCCTCAGAAGCTGATGACAAAAGGAAGACAGCTAAATCACAAACAAAACTACCTCCTCTTCCTGCTTACAAGTCAGAACTGAAATCAGGTCCAGTAAGGAATCCGGGAACTGTGCCTTTTATATGGGAGCAAATTCCAGGAAGACCCAAGGACGAAAGTATACCCAAAAATCAGGATCTTGAAGGGCCTCTGGTTGCACCAAAGCTTCCACCCGGAAGGGTCTCAAAGGTTAAGAAGCAGGGGTTGGATAAAGGTTCTAAAGGTACAACAGCTGCTCAATCCCAAGCCGGAAATGTGCTTTCCAGTTCTCAAGATATTTCAGCCTTGGAGAGAAAAGTAGCTACTAAAGATGAAAGATCTAGAGAGGGGAAGGAGGAGAGGACTAGTTCAGAGGATGGTGATGAGACCTATTTAGATGCACTTGATGCACTTTCTAGAACTGCATCAGCCTATTTGAACTGTAGTGTAAGTGGTTTAAGTGGACTGGATGGTCCAGATATCATACCCTCGGGAACTTTCTCAACAGATCCACAGACACGGGATTTCATGATGGGTCGGTTCTTGCCTGCAGCAAAAGCAATGGCTTCAGAAACACCTCATAATGCTCCTAGGAAGCAACCAGTGGCTAGAGAGCAACCAATTTCCAGAGAGGAACCAAGAAGGGTGAGAAAGGTAGTGACTGGGGATAAGCGGCATCAACTCAATCAAGATAGGCCACTTTATGTTCGAGAAATAGCTGGGGAAGCAAGTGAGGATGAAGGGATGAGAATGCCGGTGCAGGTACCCATTTCTTCTGTTCGTAGAGTGCACGGTAACTCTTCTTATGCTGGTTCTCACACTAAAGCTAAAGAAAAGCATGTCTGGAGTGGTGTATATAAACAAAGATTAATTAGTGGTGATCAAGAAGCTGGGCTGCATGAAGATAACATTGATTTGAGACGTGAATCCAACCAGATCAGTAACAGAAGTGATGGTCTGACATTAGATGGGTCATCAGTAAACAGGCGTCTGCAGCGTAGTGGCATATCACCCTACCGTAGGGAATGTTCTCAGTCTATCCTTCATGATGGAAAATGTTTTCTTGGTATTCCTGAGAAAGCTAAGAGTTCCAAGGAGACTAGTAGCTCGGATAAATATAGAAAAGGCCGCAGGTTTCTGGAAATATTGGCTAGTGAGAATGCTGAATGGGAAGCGGGCTTAGGAAGTCCTGTGGTTGAGAAGACACTATATGTTGATTCTGTACAGACAGTAAAATCTTCAAGTTCAAATTCATTTTCCTCAGATATAAAGGGCGAGATAAAGGGACTTATTCATTACAGACACAATGATTTGGACATTCCTGAAAGAAGTGGTGAAATGGAAGAAACTCCATTGTCAGAGTCTTCATGTCAAGATATTGAACACTTGGGGGATGTGAATGAGAAGGCAGTAGTTCAGTTTAAATGTTTGGACTTTTCTAACTCCAATTTTCTGTCTTCTTCTGGCAAATCCACCAGTGATGTGCAAACAATCACAAGAAATGGTTCTCTACAGGATCAAAAGGATTCTAACAAACTGGCAATCTCAAAAGTGCCCAACCAAGAGGAGTTTAATTTAGAAAGCCAACAGTTGGAGAATTCAGATGATCAAGAAAATTGCCACGGACTTACTCAGGAGTGTATTAGGTTAACAAGCATGAAGCTGGCTGATGAGGAGAACACTGGTTTAGAAACCCAACAGTCTAAGATTTCAGGTACTGATGACATTTCTTATGGCCTAGTTCAAAATCCTATTACCTTGATCAGCTCGAAAGTGGCCAGGAAGGGGAAGATTGATTTAGAAAGCCAACGTCTTGTGAAACTTGGTAATCAAGGTAGTTCCCAGGGCAACAATGCACGACTACATCTTGGACCTCCTTTACCAAAATCACCGTCAGAGTCTTGGCTAAAGCGTACCTTGCCTACCATTTCCTCCAGGAACTCTTCTTCACAGTCGTCTCTAGGTTCCCGGATTTATACCAGCAGTCTGGTTTCTAAGATATCCTCTCTCGATCCCAAGTGGGAGACGATTGTGAAAACTTCTAATGTGCATCATGGGCGTTCGCGATTTTCTGAGGAACTTCTTACACCTATACCAGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF688

Protein Analysis

730

Amino Acids

80.44

Weight (kDa)

8.41

Isoelectric Point (pI)

54.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF688	PF05097	1 - 261	8.9e-76	Protein of unknown function (DUF688)
DUF688	PF05097	278 - 453	1.8e-17	Protein of unknown function (DUF688)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30990 AT2G30990 AT2G30990 AT2G30990 AT2G30990
fragaria_vesca	FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510
malus_domestica	MD09G1236600.v1.1 MD17G1266300.v1.1 MD17G1266400.v1.1
prunus_persica	Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1
pyrus_communis	pycom09g15510 pycom09g15520 pycom17g26590
rosa_chinensis	RchiOBHm_Chr2g0129801 RchiOBHm_Chr2g0129871 RchiOBHm_Chr7g0242591 RchiOBHm_Chr7g0242601
rosa_laevigata	RLG00000019104 RLG00000031611
rosa_multiflora	Rmu_sc0000650.1_g000026 Rmu_sc0007216.1_g000002
rosa_roxburghii	Rroxscaffold_2G00114300
rosa_rugosa	Rorug02G0289800 Rorug02G0289900 Rorug02G0290000 Rorug02G0290100 Rorug02G0290200
rosa_samantha	Rh2AG340700 Rh2AG341300 Rh2BG349100 Rh2CG328000 Rh2DG367400 Rh3CG154600 Rh3DG155700
rosa_wichuraiana	Rw2G027770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	558
Acc36I	ACCTGC	2 cut(s)	838, 1209
Acc65I	GGTACC	1 cut(s)	850
AccB1I	GGYRCC	1 cut(s)	850
AccB7I	CCANNNNNTGG	1 cut(s)	1678
AccI	GTMKAC	1 cut(s)	229
AccII	CGCG	1 cut(s)	2152
AciI	CCGC	3 cut(s)	760, 1216, 1262
AclWI	GGATC	4 cut(s)	252, 590, 1611, 2093
AcoI	YGGCCR	2 cut(s)	29, 1863
AcsI	RAATTY	4 cut(s)	19, 201, 1336, 1684
AcuI	CTGAAG	1 cut(s)	639
AcyI	GRCGYC	1 cut(s)	1075
AfaI	GTAC	5 cut(s)	334, 852, 1311, 1804, 2002
AfiI	CCNNNNNNNGG	3 cut(s)	1107, 1678, 1872
AgsI	TTSAA	7 cut(s)	19, 251, 526, 1329, 1335, 1469, 1832
AhlI	ACTAGT	2 cut(s)	452, 1187
AjiI	CACGTC	1 cut(s)	1010
AjnI	CCWGG	4 cut(s)	205, 1865, 1929, 2021
AjuI	GAANNNNNNNTTGG	2 cut(s)	296, 328
Alw21I	GWGCWC	1 cut(s)	879
Alw26I	GTCTC	8 cut(s)	40, 73, 295, 467, 1000, 1178, 2049, 2105
Alw44I	GTGCAC	1 cut(s)	875
AlwI	GGATC	4 cut(s)	252, 590, 1611, 2093
AlwNI	CAGNNNCTG	2 cut(s)	80, 1805
Ama87I	CYCGRG	1 cut(s)	577
AoxI	GGCC	6 cut(s)	29, 254, 782, 1213, 1822, 1863
ApaLI	GTGCAC	1 cut(s)	875
ApeKI	GCWGC	4 cut(s)	341, 638, 982, 1081
ApoI	RAATTY	4 cut(s)	19, 201, 1336, 1684
ArsI	GACNNNNNNTTYG	2 cut(s)	1964, 1996
AseI	ATTAAT	1 cut(s)	956
Asp700I	GAANNNNTTC	1 cut(s)	1591
Asp718I	GGTACC	1 cut(s)	850
AspA2I	CCTAGG	1 cut(s)	677
AspS9I	GGNCC	4 cut(s)	158, 254, 560, 1958
AsuC2I	CCSGG	3 cut(s)	174, 282, 2056
AsuHPI	GGTGA	6 cut(s)	479, 745, 977, 1089, 1433, 1968
AvaI	CYCGRG	1 cut(s)	577
AvaII	GGWCC	3 cut(s)	158, 560, 1958
AvrII	CCTAGG	1 cut(s)	677
BaeGI	GKGCMC	2 cut(s)	879, 1644
BalI	TGGCCA	1 cut(s)	1865
BanI	GGYRCC	1 cut(s)	850
BbsI	GAAGAC	5 cut(s)	101, 217, 1295, 1443, 1536
Bbv12I	GWGCWC	1 cut(s)	879
BbvI	GCAGC	4 cut(s)	328, 650, 969, 1093
BccI	CCATC	6 cut(s)	458, 551, 613, 1034, 1049, 1130
BciT130I	CCWGG	4 cut(s)	207, 1867, 1931, 2023
BclI	TGATCA	3 cut(s)	967, 1693, 1848
BcnI	CCSGG	3 cut(s)	174, 282, 2056
BcoDI	GTCTC	8 cut(s)	40, 73, 295, 467, 1000, 1178, 2049, 2105
BcuI	ACTAGT	2 cut(s)	452, 1187
BfaI	CTAG	9 cut(s)	429, 453, 504, 678, 696, 1188, 1239, 1826, 2048
BfmI	CTRYAG	4 cut(s)	529, 636, 1079, 1598
BfuAI	ACCTGC	2 cut(s)	838, 1209
BglII	AGATCT	1 cut(s)	425
BisI	GCNGC	6 cut(s)	342, 639, 761, 983, 1082, 1216
BlnI	CCTAGG	1 cut(s)	677
BlsI	GCNGC	6 cut(s)	343, 640, 762, 984, 1083, 1217
Bme1390I	CCNGG	7 cut(s)	174, 207, 282, 1867, 1931, 2023, 2056
Bme18I	GGWCC	3 cut(s)	158, 560, 1958
BmeT110I	CYCGRG	1 cut(s)	577
BmgBI	CACGTC	1 cut(s)	1010
BmgT120I	GGNCC	4 cut(s)	158, 254, 560, 1958
BmiI	GGNNCC	3 cut(s)	723, 852, 2053
BmrFI	CCNGG	7 cut(s)	174, 207, 282, 1867, 1931, 2023, 2056
BmrI	ACTGGG	1 cut(s)	759
BmsI	GCATC	5 cut(s)	475, 484, 521, 772, 2146
BmuI	ACTGGG	1 cut(s)	759
BoxI	GACNNNNGTC	1 cut(s)	65
BpiI	GAAGAC	5 cut(s)	101, 217, 1295, 1443, 1536
BpmI	CTGGAG	2 cut(s)	952, 2005
Bpu10I	CCTNAGC	1 cut(s)	1267
BpuEI	CTTGAG	1 cut(s)	363
BpuMI	CCSGG	3 cut(s)	174, 282, 2056
BsaHI	GRCGYC	1 cut(s)	1075
BsaI	GGTCTC	2 cut(s)	295, 467
BsaJI	CCNNGG	8 cut(s)	216, 393, 576, 677, 1179, 1708, 1929, 1930
Bsc4I	CCNNNNNNNGG	3 cut(s)	1107, 1678, 1872
Bse118I	RCCGGY	2 cut(s)	27, 841
Bse1I	ACTGG	8 cut(s)	161, 372, 558, 689, 754, 1563, 1629, 1774
Bse3DI	GCAATG	1 cut(s)	654
BseBI	CCWGG	4 cut(s)	207, 1867, 1931, 2023
BseDI	CCNNGG	8 cut(s)	216, 393, 576, 677, 1179, 1708, 1929, 1930
BseGI	GGATG	5 cut(s)	469, 562, 829, 837, 1486
BseLI	CCNNNNNNNGG	3 cut(s)	1107, 1678, 1872
BseMI	GCAATG	1 cut(s)	654
BseMII	CTCAG	7 cut(s)	69, 87, 1133, 1152, 1362, 1733, 2151
BseNI	ACTGG	8 cut(s)	161, 372, 558, 689, 754, 1563, 1629, 1774
BseRI	GAGGAG	5 cut(s)	61, 114, 458, 1667, 1775
BseSI	GKGCMC	2 cut(s)	879, 1644
BseXI	GCAGC	4 cut(s)	328, 650, 969, 1093
BseYI	CCCAGC	2 cut(s)	806, 977
BsgI	GTGCAG	1 cut(s)	866
Bsh1236I	CGCG	1 cut(s)	2152
BshFI	GGCC	6 cut(s)	31, 256, 784, 1215, 1824, 1865
BshNI	GGYRCC	1 cut(s)	850
BsiHKAI	GWGCWC	1 cut(s)	879
BsiHKCI	CYCGRG	1 cut(s)	577
BsiSI	CCGG	6 cut(s)	28, 173, 282, 357, 842, 2056
BslFI	GGGAC	1 cut(s)	1386
BslI	CCNNNNNNNGG	3 cut(s)	1107, 1678, 1872
BsmAI	GTCTC	8 cut(s)	40, 73, 295, 467, 1000, 1178, 2049, 2105
BsmBI	CGTCTC	4 cut(s)	40, 1000, 2049, 2105
BsmFI	GGGAC	1 cut(s)	1386
BsmI	GAATGC	2 cut(s)	843, 1252
BsnI	GGCC	6 cut(s)	31, 256, 784, 1215, 1824, 1865
Bso31I	GGTCTC	2 cut(s)	295, 467
BsoBI	CYCGRG	1 cut(s)	577
Bsp1286I	GDGCHC	2 cut(s)	879, 1644
Bsp1407I	TGTACA	1 cut(s)	1309
Bsp143I	GATC	9 cut(s)	244, 425, 595, 967, 1023, 1603, 1693, 1848, 2098
Bsp68I	TCGCGA	1 cut(s)	2152
BspACI	CCGC	3 cut(s)	760, 1216, 1262
BspANI	GGCC	6 cut(s)	31, 256, 784, 1215, 1824, 1865
BspCNI	CTCAG	7 cut(s)	68, 86, 1132, 1153, 1361, 1732, 2152
BspFNI	CGCG	1 cut(s)	2152
BspHI	TCATGA	2 cut(s)	615, 1132
BspLI	GGNNCC	3 cut(s)	723, 852, 2053
BspMAI	CTGCAG	2 cut(s)	640, 1083
BspMI	ACCTGC	2 cut(s)	838, 1209
BspPI	GGATC	4 cut(s)	252, 590, 1611, 2093
BspT107I	GGYRCC	1 cut(s)	850
BspTNI	GGTCTC	2 cut(s)	295, 467
BsrDI	GCAATG	1 cut(s)	654
BsrFI	RCCGGY	2 cut(s)	27, 841
BsrGI	TGTACA	1 cut(s)	1309
BsrI	ACTGG	8 cut(s)	161, 372, 558, 689, 754, 1563, 1629, 1774
BssAI	RCCGGY	2 cut(s)	27, 841
BssECI	CCNNGG	8 cut(s)	216, 393, 576, 677, 1179, 1708, 1929, 1930
BssMI	GATC	9 cut(s)	244, 425, 595, 967, 1023, 1603, 1693, 1848, 2098
BssNAI	GTATAC	1 cut(s)	230
BssNI	GRCGYC	1 cut(s)	1075
BssT1I	CCWWGG	4 cut(s)	216, 393, 677, 1179
Bst1107I	GTATAC	1 cut(s)	230
Bst2UI	CCWGG	4 cut(s)	207, 1867, 1931, 2023
Bst6I	CTCTTC	3 cut(s)	132, 892, 2035
BstACI	GRCGYC	1 cut(s)	1075
BstAPI	GCANNNNNTGC	1 cut(s)	494
BstAUI	TGTACA	1 cut(s)	1309
BstC8I	GCNNGC	3 cut(s)	636, 1264, 1752
BstDSI	CCRYGG	1 cut(s)	1708
BstENI	CCTNNNNNAGG	1 cut(s)	1105
BstF5I	GGATG	5 cut(s)	469, 562, 829, 837, 1486
BstFNI	CGCG	1 cut(s)	2152
BstKTI	GATC	9 cut(s)	247, 428, 598, 970, 1026, 1606, 1696, 1851, 2101
BstMAI	GTCTC	8 cut(s)	40, 73, 295, 467, 1000, 1178, 2049, 2105
BstMBI	GATC	9 cut(s)	244, 425, 595, 967, 1023, 1603, 1693, 1848, 2098
BstMWI	GCNNNNNNNGC	6 cut(s)	494, 644, 812, 1081, 2005, 2143
BstNI	CCWGG	4 cut(s)	207, 1867, 1931, 2023
BstNSI	RCATGY	1 cut(s)	929
BstPAI	GACNNNNGTC	1 cut(s)	65
BstSCI	CCNGG	7 cut(s)	172, 205, 280, 1865, 1929, 2021, 2054
BstSFI	CTRYAG	4 cut(s)	529, 636, 1079, 1598
BstSLI	GKGCMC	2 cut(s)	879, 1644
BstUI	CGCG	1 cut(s)	2152
BstV1I	GCAGC	4 cut(s)	328, 650, 969, 1093
BstV2I	GAAGAC	5 cut(s)	101, 217, 1295, 1443, 1536
BstX2I	RGATCY	3 cut(s)	244, 425, 595
BstXI	CCANNNNNNTGG	1 cut(s)	2074
BstYI	RGATCY	3 cut(s)	244, 425, 595
BstZ17I	GTATAC	1 cut(s)	230
BsuRI	GGCC	6 cut(s)	31, 256, 784, 1215, 1824, 1865
BtgI	CCRYGG	1 cut(s)	1708
BtrI	CACGTC	1 cut(s)	1010
BtsCI	GGATG	5 cut(s)	469, 562, 829, 837, 1486
BtsIMutI	CAGTG	3 cut(s)	696, 1570, 1767
BtuMI	TCGCGA	1 cut(s)	2152
BveI	ACCTGC	2 cut(s)	838, 1209
Cac8I	GCNNGC	3 cut(s)	636, 1264, 1752
CaiI	CAGNNNCTG	2 cut(s)	80, 1805
CciI	TCATGA	2 cut(s)	615, 1132
Cfr10I	RCCGGY	2 cut(s)	27, 841
Cfr13I	GGNCC	4 cut(s)	158, 254, 560, 1958
CseI	GACGC	1 cut(s)	1064
Csp6I	GTAC	5 cut(s)	333, 851, 1310, 1803, 2001
CviAII	CATG	7 cut(s)	616, 926, 986, 1133, 1455, 1744, 2141
CviQI	GTAC	5 cut(s)	333, 851, 1310, 1803, 2001
DpnI	GATC	9 cut(s)	246, 427, 597, 969, 1025, 1605, 1695, 1850, 2100
DpnII	GATC	9 cut(s)	244, 425, 595, 967, 1023, 1603, 1693, 1848, 2098
DraI	TTTAAA	1 cut(s)	1510
DrdI	GACNNNNNNGTC	1 cut(s)	558
DseDI	GACNNNNNNGTC	1 cut(s)	558
EaeI	YGGCCR	2 cut(s)	29, 1863
Eam1104I	CTCTTC	3 cut(s)	132, 892, 2035
EarI	CTCTTC	3 cut(s)	132, 892, 2035
Eco130I	CCWWGG	4 cut(s)	216, 393, 677, 1179
Eco31I	GGTCTC	2 cut(s)	295, 467
Eco32I	GATATC	2 cut(s)	568, 2088
Eco47I	GGWCC	3 cut(s)	158, 560, 1958
Eco57I	CTGAAG	1 cut(s)	639
Eco88I	CYCGRG	1 cut(s)	577
EcoNI	CCTNNNNNAGG	1 cut(s)	1105
EcoO109I	RGGNCCY	1 cut(s)	254
EcoRI	GAATTC	1 cut(s)	1684
EcoRII	CCWGG	4 cut(s)	205, 1865, 1929, 2021
EcoRV	GATATC	2 cut(s)	568, 2088
EcoT14I	CCWWGG	4 cut(s)	216, 393, 677, 1179
ErhI	CCWWGG	4 cut(s)	216, 393, 677, 1179
Esp3I	CGTCTC	4 cut(s)	40, 1000, 2049, 2105
FaeI	CATG	7 cut(s)	619, 929, 989, 1136, 1458, 1747, 2144
FalI	AAGNNNNNCTT	2 cut(s)	1988, 2020
FaqI	GGGAC	1 cut(s)	1386
FatI	CATG	7 cut(s)	615, 925, 985, 1132, 1454, 1743, 2140
FauI	CCCGC	1 cut(s)	1255
FbaI	TGATCA	3 cut(s)	967, 1693, 1848
FblI	GTMKAC	1 cut(s)	229
Fnu4HI	GCNGC	6 cut(s)	342, 639, 761, 983, 1082, 1216
FokI	GGATG	5 cut(s)	476, 569, 836, 844, 1493
Fsp4HI	GCNGC	6 cut(s)	342, 639, 761, 983, 1082, 1216
FspBI	CTAG	9 cut(s)	429, 453, 504, 678, 696, 1188, 1239, 1826, 2048
GluI	GCNGC	6 cut(s)	342, 639, 761, 983, 1082, 1216
GsaI	CCCAGC	2 cut(s)	810, 981
GsuI	CTGGAG	2 cut(s)	952, 2005
HaeIII	GGCC	6 cut(s)	31, 256, 784, 1215, 1824, 1865
HapII	CCGG	6 cut(s)	28, 173, 282, 357, 842, 2056
HgaI	GACGC	1 cut(s)	1064
Hin1I	GRCGYC	1 cut(s)	1075
Hin1II	CATG	7 cut(s)	619, 929, 989, 1136, 1458, 1747, 2144
HincII	GTYRAC	1 cut(s)	1737
HindII	GTYRAC	1 cut(s)	1737
HindIII	AAGCTT	2 cut(s)	272, 2187
HinfI	GANTC	6 cut(s)	169, 1013, 1304, 1448, 1613, 1985
HpaI	GTTAAC	1 cut(s)	1737
HpaII	CCGG	6 cut(s)	28, 173, 282, 357, 842, 2056
HphI	GGTGA	6 cut(s)	479, 745, 977, 1089, 1433, 1968
Hpy166II	GTNNAC	5 cut(s)	230, 551, 877, 1069, 1737
Hpy8I	GTNNAC	5 cut(s)	230, 551, 877, 1069, 1737
HpyAV	CCTTC	8 cut(s)	245, 279, 433, 723, 821, 1139, 1486, 1864
HpyCH4IV	ACGT	3 cut(s)	49, 1009, 1897
HpyF10VI	GCNNNNNNNGC	6 cut(s)	494, 644, 812, 1081, 2005, 2143
HpySE526I	ACGT	3 cut(s)	49, 1009, 1897
Hsp92I	GRCGYC	1 cut(s)	1075
Hsp92II	CATG	7 cut(s)	619, 929, 989, 1136, 1458, 1747, 2144
KpnI	GGTACC	1 cut(s)	854
Ksp22I	TGATCA	3 cut(s)	967, 1693, 1848
KspAI	GTTAAC	1 cut(s)	1737
Kzo9I	GATC	9 cut(s)	244, 425, 595, 967, 1023, 1603, 1693, 1848, 2098
LmnI	GCTCC	2 cut(s)	196, 679
Lsp1109I	GCAGC	4 cut(s)	328, 650, 969, 1093
LweI	GCATC	5 cut(s)	475, 484, 521, 772, 2146
MaeI	CTAG	9 cut(s)	429, 453, 504, 678, 696, 1188, 1239, 1826, 2048
MaeII	ACGT	3 cut(s)	49, 1009, 1897
MaeIII	GTNAC	3 cut(s)	745, 881, 1028
MalI	GATC	9 cut(s)	246, 427, 597, 969, 1025, 1605, 1695, 1850, 2100
MboI	GATC	9 cut(s)	244, 425, 595, 967, 1023, 1603, 1693, 1848, 2098
MflI	RGATCY	3 cut(s)	244, 425, 595
MhlI	GDGCHC	2 cut(s)	879, 1644
MlsI	TGGCCA	1 cut(s)	1865
MluCI	AATT	9 cut(s)	19, 201, 708, 957, 1336, 1534, 1660, 1684, 1702
MluNI	TGGCCA	1 cut(s)	1865
MlyI	GAGTC	2 cut(s)	1457, 1994
MmeI	TCCRAC	3 cut(s)	294, 1041, 1659
Mox20I	TGGCCA	1 cut(s)	1865
MroXI	GAANNNNTTC	1 cut(s)	1591
MscI	TGGCCA	1 cut(s)	1865
MseI	TTAA	7 cut(s)	24, 300, 545, 956, 1509, 1659, 1736
Msp20I	TGGCCA	1 cut(s)	1865
MspA1I	CMGCKG	1 cut(s)	341
MspI	CCGG	6 cut(s)	28, 173, 282, 357, 842, 2056
MspR9I	CCNGG	7 cut(s)	174, 207, 282, 1867, 1931, 2023, 2056
Mva1269I	GAATGC	2 cut(s)	843, 1252
MvaI	CCWGG	4 cut(s)	207, 1867, 1931, 2023
MvnI	CGCG	1 cut(s)	2152
MwoI	GCNNNNNNNGC	6 cut(s)	494, 644, 812, 1081, 2005, 2143
NciI	CCSGG	3 cut(s)	174, 282, 2056
NdeII	GATC	9 cut(s)	244, 425, 595, 967, 1023, 1603, 1693, 1848, 2098
NlaIII	CATG	7 cut(s)	619, 929, 989, 1136, 1458, 1747, 2144
NlaIV	GGNNCC	3 cut(s)	723, 852, 2053
NmuCI	GTSAC	1 cut(s)	745
NruI	TCGCGA	1 cut(s)	2152
NspI	RCATGY	1 cut(s)	929
PagI	TCATGA	2 cut(s)	615, 1132
PasI	CCCWGGG	1 cut(s)	1930
PctI	GAATGC	2 cut(s)	843, 1252
PdmI	GAANNNNTTC	1 cut(s)	1591
PfeI	GAWTC	4 cut(s)	169, 1013, 1304, 1613
PflMI	CCANNNNNTGG	1 cut(s)	1678
PfoI	TCCNGGA	4 cut(s)	172, 205, 2021, 2054
PkrI	GCNGC	6 cut(s)	343, 640, 762, 984, 1083, 1217
PleI	GAGTC	2 cut(s)	1456, 1993
PpsI	GAGTC	2 cut(s)	1456, 1993
PshAI	GACNNNNGTC	1 cut(s)	65
PshBI	ATTAAT	1 cut(s)	956
Psp6I	CCWGG	4 cut(s)	205, 1865, 1929, 2021
PspFI	CCCAGC	2 cut(s)	806, 977
PspGI	CCWGG	4 cut(s)	205, 1865, 1929, 2021
PspN4I	GGNNCC	3 cut(s)	723, 852, 2053
PspPI	GGNCC	4 cut(s)	158, 254, 560, 1958
PsrI	GAACNNNNNNTAC	2 cut(s)	1099, 1131
PstI	CTGCAG	2 cut(s)	640, 1083
PstNI	CAGNNNCTG	2 cut(s)	80, 1805
PsuI	RGATCY	3 cut(s)	244, 425, 595
PvuII	CAGCTG	1 cut(s)	341
RruI	TCGCGA	1 cut(s)	2152
RsaI	GTAC	5 cut(s)	334, 852, 1311, 1804, 2002
RsaNI	GTAC	5 cut(s)	333, 851, 1310, 1803, 2001
SaqAI	TTAA	7 cut(s)	24, 300, 545, 956, 1509, 1659, 1736
SatI	GCNGC	6 cut(s)	342, 639, 761, 983, 1082, 1216
Sau3AI	GATC	9 cut(s)	244, 425, 595, 967, 1023, 1603, 1693, 1848, 2098
Sau96I	GGNCC	4 cut(s)	158, 254, 560, 1958
SchI	GAGTC	2 cut(s)	1457, 1994
ScrFI	CCNGG	7 cut(s)	174, 207, 282, 1867, 1931, 2023, 2056
SduI	GDGCHC	2 cut(s)	879, 1644
SfaNI	GCATC	5 cut(s)	475, 484, 521, 772, 2146
SfcI	CTRYAG	4 cut(s)	529, 636, 1079, 1598
SinI	GGWCC	3 cut(s)	158, 560, 1958
SmlI	CTYRAG	1 cut(s)	378
SmoI	CTYRAG	1 cut(s)	378
SpeI	ACTAGT	2 cut(s)	452, 1187
Sse9I	AATT	9 cut(s)	19, 201, 708, 957, 1336, 1534, 1660, 1684, 1702
SsiI	CCGC	3 cut(s)	760, 1216, 1262
SspI	AATATT	1 cut(s)	1233
SspMI	CTAG	9 cut(s)	429, 453, 504, 678, 696, 1188, 1239, 1826, 2048
StyD4I	CCNGG	7 cut(s)	172, 205, 280, 1865, 1929, 2021, 2054
StyI	CCWWGG	4 cut(s)	216, 393, 677, 1179
TaiI	ACGT	3 cut(s)	52, 1012, 1900
TaqI	TCGA	3 cut(s)	796, 1856, 2097
TasI	AATT	9 cut(s)	19, 201, 708, 957, 1336, 1534, 1660, 1684, 1702
TatI	WGTACW	1 cut(s)	1309
TauI	GCSGC	2 cut(s)	763, 1218
TfiI	GAWTC	4 cut(s)	169, 1013, 1304, 1613
Tru1I	TTAA	7 cut(s)	24, 300, 545, 956, 1509, 1659, 1736
Tru9I	TTAA	7 cut(s)	24, 300, 545, 956, 1509, 1659, 1736
TscAI	CASTG	3 cut(s)	696, 1570, 1774
TseFI	GTSAC	1 cut(s)	745
TseI	GCWGC	4 cut(s)	341, 638, 982, 1081
Tsp45I	GTSAC	1 cut(s)	745
TspDTI	ATGAA	9 cut(s)	435, 604, 840, 1002, 1121, 1329, 1370, 1443, 1760
TspGWI	ACGGA	1 cut(s)	1725
TspRI	CASTG	3 cut(s)	696, 1570, 1774
Van91I	CCANNNNNTGG	1 cut(s)	1678
VneI	GTGCAC	1 cut(s)	875
VpaK11BI	GGWCC	3 cut(s)	158, 560, 1958
VspI	ATTAAT	1 cut(s)	956
XagI	CCTNNNNNAGG	1 cut(s)	1105
XapI	RAATTY	4 cut(s)	19, 201, 1336, 1684
XbaI	TCTAGA	2 cut(s)	428, 503
XceI	RCATGY	1 cut(s)	929
XmaJI	CCTAGG	1 cut(s)	677
XmiI	GTMKAC	1 cut(s)	229
XmnI	GAANNNNTTC	1 cut(s)	1591
XspI	CTAG	9 cut(s)	429, 453, 504, 678, 696, 1188, 1239, 1826, 2048

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.