Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002485

Physical Location & Seq

Genomic Coordinates Reverse (-)

43920535 .. 43924793

Gene Structure 4259 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G027770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGGAAGAGAAGCAGTTGAATTTTAACCGGCCACTTCTATCTGTGAGACGTTTCTCAGCAAAAACTGTCTCCTCAGAAGCTGATGACAAAAGGAAGACAGCTAAATCACAACCAAAACTACCTCCTCTTCCTGCTTACAAGTCAGAACTGAAATCAGGTCCAGTGAGGAATCCGGGAACTGTTCCTTTTATATGGGAGCAAATTCCAGGAAGACCCAAGGACGAAAGTATACCCAAAAATCAGGATCTTGAAGGGCCTCTGGTTGCACCAAAGCTTCCACCTGGAAGGGTCTCAAAGGTTAAGAAGCAAGGGTTGGATAAAGGTTCTAAAGGTACAACAGCTGCTCAATCCCAAAATGGGAATGTGCTTTCCAGTTCTCAAAATATTTCAGCCTTGGAGAGAAAAGTAGCTACTAAAGATGAAAGGTCTAAAGAGGGAAAGGAGGAGAGGACTAGTTCAGAGGATGGTGATGAGACCTATTTAGATGCACTTGATGCACTTTCTAGAACTGCATCAGCCTATATGAACTGTAGTGTAAGTGGTTTAAGTGGACTGGATGATCCAGATATCATACCCTCGGGAACTTTCTCAACAGATCCACAGACACGGGATTTCATGATGGGTCGGTTCTTGCCTGCAGCAAAAGCAATGGCTTCAGAAACACCTCATAATGCTCCTAGGAAGCAACCAGTGGCTAGAGAGGAACCAAGAAGGGTGATAAAGGTAGTGACTGGGGATAAGCGGCATCAACTTAATCAATATAGGCCACTTTATGTTCGAGAAATAGCTGGGGACGCAAGTAAGGATGAAGGGATGAGAATGCCTGTGCAAGTACCCATTTCTTCTGTTCGTAGAGTGCACGGTAACTCTTCTTATGCTGGTTCTCACACTGAAGCTAAAGAAAAGCATGCCGGGAGTGGTGTATATAAACAAAGATTAATTAGTGGTGATCAAGAAGCTGGGCTGCATGAAGATAACATTGATTTGAAATGTGAATCCAACCAGACCAGTAACAGAAGTAATGGTCTGACATTAGATGGGTCATCAGTAAACAGGCGTCTGCAAGGTAGTGGTATATCACCCTACCGTAGGCAATGTTCTCAGTCTATCCTTCATGATGGAAAATGTTTTCTTGGTATTCCTGAGAAAGCTAAGAGTTCCAAGGAGACTAGTAGCTCGGATAAATATAGAAAAGGCCACAGGTTTCTGGAAATATTGGCTAGTGAGAATGCTGAATGGGAAGCGGGTTTAGGAAGTCCTGTGGTTGAGAAGACACTGTATGTTGATTCTGTACAGACAGTAAAATCTTCAAGTTCAAATTCATTTTCCTCAGATATAAAGGGCGAGGTAAAGGGACTTATTGATTACAGACGGAATGATTTGGACATTCCTGAAAGAAGTGGTGAAATGGAAGAAACTCCATTGGCAGAGTCTTCATGTCAAGATATTGAACACTTGCGGTATGTGAATGAGAAGGCAGTAGTTCAGTTTAAATGTTTGGACTTAGAAAACTCCAGTTTCCTGTCTTCTTCTGGCAAATCAACAGGTGATGTGCAAACAATCTTAAGAAATGGTTCTCTACAGGATCAAAAGGATTGTAACAAACTGGCAATATCAAAAGTGCCCAACCAAGAGGCGTTTAATTTAGAAAGCCAACAGTTGGAGAATTCAGATAATCAAGAAAATTGCCACGGCCTTACTGAGGAATGTATTAGGATGACAAGCGTGAATCTGGCTGATGAAGAGAACACTGATTTAGAAACCCAACAGCCTAAGACTTCAGGTACTGATGACATTTCTCATGGCCTAGTTCAAAATTCTATTACCTTGATCAGCTTGAAAGTGGCCAGGAAGGGGAAGATTGATTTAGAAAGCCAACGTCTTGTGAAACTTGGTAATCAAGGTAGTTCCCAGGGCAACAATGCACGACTACCTCTTGGACCTCCTTTACCAAAATCACCGTCAGAGTCTTGGCTAAAGCGTACCTTGCCTACCATTTCCTCCAGGAATTCATCTTCACAGTCATCTCTTGGTTCACGCATTTATACCAGCAGTCCGGTTTCTAAGGTATCCTCTCTCGATCCCAAGTGGGAGACGATTGTCAAAACTTCTAATGTGCATCACGGCGTTCGCGGTTCTCTGAGGAACTTCTTACACCTATACCAGAAGCTTAGATTGAGGAACTCTTATGTGAAGCTCACCAGCTTATTCATTTGCCTTGGTTGGATGTCTCTCTTGATGGGCTTAAAGGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF688

Protein Analysis

751

Amino Acids

82.68

Weight (kDa)

8.97

Isoelectric Point (pI)

50.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF688	PF05097	1 - 255	1.4e-75	Protein of unknown function (DUF688)
DUF688	PF05097	272 - 447	3.2e-17	Protein of unknown function (DUF688)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30990 AT2G30990 AT2G30990 AT2G30990 AT2G30990
fragaria_vesca	FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510
malus_domestica	MD09G1236600.v1.1 MD17G1266300.v1.1 MD17G1266400.v1.1
prunus_persica	Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1
pyrus_communis	pycom09g15510 pycom09g15520 pycom17g26590
rosa_chinensis	RchiOBHm_Chr2g0129801 RchiOBHm_Chr2g0129871 RchiOBHm_Chr7g0242591 RchiOBHm_Chr7g0242601
rosa_laevigata	RLG00000019104 RLG00000031611
rosa_multiflora	Rmu_sc0000650.1_g000026 Rmu_sc0007216.1_g000002
rosa_roxburghii	Rroxscaffold_2G00114300
rosa_rugosa	Rorug02G0289800 Rorug02G0289900 Rorug02G0290000 Rorug02G0290100 Rorug02G0290200
rosa_samantha	Rh2AG340700 Rh2AG341300 Rh2BG349100 Rh2CG328000 Rh2DG367400 Rh3CG154600 Rh3DG155700
rosa_wichuraiana	Rw2G027770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1660
AccI	GTMKAC	1 cut(s)	229
AccII	CGCG	1 cut(s)	2133
AciI	CCGC	4 cut(s)	742, 1244, 1459, 2133
AclWI	GGATC	5 cut(s)	252, 554, 590, 1593, 2075
AcoI	YGGCCR	2 cut(s)	29, 1845
AcsI	RAATTY	6 cut(s)	19, 201, 1318, 1666, 1816, 2008
AcuI	CTGAAG	3 cut(s)	639, 912, 1764
AcyI	GRCGYC	1 cut(s)	1057
AfaI	GTAC	5 cut(s)	334, 834, 1293, 1786, 1984
AfiI	CCNNNNNNNGG	5 cut(s)	357, 1089, 1660, 1702, 1854
AflII	CTTAAG	1 cut(s)	1564
AgsI	TTSAA	8 cut(s)	19, 251, 988, 1311, 1317, 1451, 1814, 1840
AhlI	ACTAGT	2 cut(s)	452, 1169
AjnI	CCWGG	5 cut(s)	205, 280, 1847, 1911, 2003
AjuI	GAANNNNNNNTTGG	2 cut(s)	296, 328
Alw21I	GWGCWC	1 cut(s)	861
Alw26I	GTCTC	7 cut(s)	40, 73, 295, 467, 1160, 2087, 2235
Alw44I	GTGCAC	1 cut(s)	857
AlwI	GGATC	5 cut(s)	252, 554, 590, 1593, 2075
AlwNI	CAGNNNCTG	2 cut(s)	80, 1787
Ama87I	CYCGRG	1 cut(s)	577
AoxI	GGCC	7 cut(s)	29, 254, 764, 1195, 1693, 1804, 1845
ApaLI	GTGCAC	1 cut(s)	857
ApeKI	GCWGC	3 cut(s)	341, 638, 964
ApoI	RAATTY	6 cut(s)	19, 201, 1318, 1666, 1816, 2008
ArsI	GACNNNNNNTTYG	2 cut(s)	1946, 1978
AseI	ATTAAT	1 cut(s)	938
Asp700I	GAANNNNTTC	1 cut(s)	1573
AspA2I	CCTAGG	1 cut(s)	677
AspS9I	GGNCC	3 cut(s)	158, 254, 1940
AsuC2I	CCSGG	2 cut(s)	174, 913
AsuHPI	GGTGA	8 cut(s)	479, 727, 959, 1071, 1415, 1559, 1950, 2191
AvaI	CYCGRG	1 cut(s)	577
AvaII	GGWCC	2 cut(s)	158, 1940
AvrII	CCTAGG	1 cut(s)	677
BaeGI	GKGCMC	2 cut(s)	861, 1626
BalI	TGGCCA	1 cut(s)	1847
BbsI	GAAGAC	5 cut(s)	101, 217, 1277, 1425, 1518
Bbv12I	GWGCWC	1 cut(s)	861
BbvI	GCAGC	3 cut(s)	328, 650, 951
BccI	CCATC	5 cut(s)	458, 613, 1031, 1112, 2233
BceAI	ACGGC	2 cut(s)	1708, 2140
BciT130I	CCWGG	5 cut(s)	207, 282, 1849, 1913, 2005
BciVI	GTATCC	1 cut(s)	2080
BclI	TGATCA	2 cut(s)	949, 1830
BcnI	CCSGG	2 cut(s)	174, 913
BcoDI	GTCTC	7 cut(s)	40, 73, 295, 467, 1160, 2087, 2235
BcuI	ACTAGT	2 cut(s)	452, 1169
BfaI	CTAG	7 cut(s)	453, 504, 678, 696, 1170, 1221, 1808
BfmI	CTRYAG	3 cut(s)	529, 636, 1580
BfrI	CTTAAG	1 cut(s)	1564
BfuI	GTATCC	1 cut(s)	2080
BisI	GCNGC	4 cut(s)	342, 639, 743, 965
BlnI	CCTAGG	1 cut(s)	677
BlsI	GCNGC	4 cut(s)	343, 640, 744, 966
Bme1390I	CCNGG	7 cut(s)	174, 207, 282, 913, 1849, 1913, 2005
Bme18I	GGWCC	2 cut(s)	158, 1940
BmeT110I	CYCGRG	1 cut(s)	577
BmgT120I	GGNCC	3 cut(s)	158, 254, 1940
BmiI	GGNNCC	1 cut(s)	705
BmrFI	CCNGG	7 cut(s)	174, 207, 282, 913, 1849, 1913, 2005
BmrI	ACTGGG	1 cut(s)	741
BmsI	GCATC	5 cut(s)	475, 484, 521, 754, 2128
BmuI	ACTGGG	1 cut(s)	741
BoxI	GACNNNNGTC	1 cut(s)	2099
BpiI	GAAGAC	5 cut(s)	101, 217, 1277, 1425, 1518
BpmI	CTGGAG	2 cut(s)	1498, 1987
BpuMI	CCSGG	2 cut(s)	174, 913
BsaHI	GRCGYC	1 cut(s)	1057
BsaI	GGTCTC	2 cut(s)	295, 467
BsaJI	CCNNGG	9 cut(s)	216, 393, 576, 677, 1161, 1690, 1911, 1912, 2218
BsaWI	WCCGGW	1 cut(s)	2056
Bsc4I	CCNNNNNNNGG	5 cut(s)	357, 1089, 1660, 1702, 1854
Bse118I	RCCGGY	1 cut(s)	27
Bse1I	ACTGG	8 cut(s)	161, 372, 558, 689, 736, 1008, 1515, 1611
Bse3DI	GCAATG	2 cut(s)	654, 1100
BseBI	CCWGG	5 cut(s)	207, 282, 1849, 1913, 2005
BseDI	CCNNGG	9 cut(s)	216, 393, 576, 677, 1161, 1690, 1911, 1912, 2218
BseGI	GGATG	6 cut(s)	469, 562, 811, 819, 1722, 2232
BseLI	CCNNNNNNNGG	5 cut(s)	357, 1089, 1660, 1702, 1854
BseMI	GCAATG	2 cut(s)	654, 1100
BseMII	CTCAG	7 cut(s)	69, 87, 1115, 1134, 1344, 1692, 2132
BseNI	ACTGG	8 cut(s)	161, 372, 558, 689, 736, 1008, 1515, 1611
BseRI	GAGGAG	3 cut(s)	61, 114, 458
BseSI	GKGCMC	2 cut(s)	861, 1626
BseXI	GCAGC	3 cut(s)	328, 650, 951
BseYI	CCCAGC	2 cut(s)	788, 959
Bsh1236I	CGCG	1 cut(s)	2133
BshFI	GGCC	7 cut(s)	31, 256, 766, 1197, 1695, 1806, 1847
BsiHKAI	GWGCWC	1 cut(s)	861
BsiHKCI	CYCGRG	1 cut(s)	577
BsiSI	CCGG	4 cut(s)	28, 173, 912, 2057
BslFI	GGGAC	2 cut(s)	806, 1368
BslI	CCNNNNNNNGG	5 cut(s)	357, 1089, 1660, 1702, 1854
BsmAI	GTCTC	7 cut(s)	40, 73, 295, 467, 1160, 2087, 2235
BsmBI	CGTCTC	2 cut(s)	40, 2087
BsmFI	GGGAC	2 cut(s)	806, 1368
BsmI	GAATGC	2 cut(s)	825, 1234
BsnI	GGCC	7 cut(s)	31, 256, 766, 1197, 1695, 1806, 1847
Bso31I	GGTCTC	2 cut(s)	295, 467
BsoBI	CYCGRG	1 cut(s)	577
Bsp1286I	GDGCHC	2 cut(s)	861, 1626
Bsp1407I	TGTACA	1 cut(s)	1291
Bsp143I	GATC	7 cut(s)	244, 559, 595, 949, 1585, 1830, 2080
BspACI	CCGC	4 cut(s)	742, 1244, 1459, 2133
BspANI	GGCC	7 cut(s)	31, 256, 766, 1197, 1695, 1806, 1847
BspCNI	CTCAG	7 cut(s)	68, 86, 1114, 1135, 1343, 1693, 2133
BspFNI	CGCG	1 cut(s)	2133
BspHI	TCATGA	2 cut(s)	615, 1114
BspLI	GGNNCC	1 cut(s)	705
BspMAI	CTGCAG	1 cut(s)	640
BspPI	GGATC	5 cut(s)	252, 554, 590, 1593, 2075
BspTI	CTTAAG	1 cut(s)	1564
BspTNI	GGTCTC	2 cut(s)	295, 467
BsrDI	GCAATG	2 cut(s)	654, 1100
BsrFI	RCCGGY	1 cut(s)	27
BsrGI	TGTACA	1 cut(s)	1291
BsrI	ACTGG	8 cut(s)	161, 372, 558, 689, 736, 1008, 1515, 1611
BssAI	RCCGGY	1 cut(s)	27
BssECI	CCNNGG	9 cut(s)	216, 393, 576, 677, 1161, 1690, 1911, 1912, 2218
BssMI	GATC	7 cut(s)	244, 559, 595, 949, 1585, 1830, 2080
BssNAI	GTATAC	1 cut(s)	230
BssNI	GRCGYC	1 cut(s)	1057
BssT1I	CCWWGG	5 cut(s)	216, 393, 677, 1161, 2218
Bst1107I	GTATAC	1 cut(s)	230
Bst2UI	CCWGG	5 cut(s)	207, 282, 1849, 1913, 2005
Bst6I	CTCTTC	3 cut(s)	132, 874, 1737
BstACI	GRCGYC	1 cut(s)	1057
BstAFI	CTTAAG	1 cut(s)	1564
BstAPI	GCANNNNNTGC	1 cut(s)	494
BstAUI	TGTACA	1 cut(s)	1291
BstC8I	GCNNGC	2 cut(s)	636, 909
BstDSI	CCRYGG	1 cut(s)	1690
BstENI	CCTNNNNNAGG	2 cut(s)	1087, 1700
BstF5I	GGATG	6 cut(s)	469, 562, 811, 819, 1722, 2232
BstFNI	CGCG	1 cut(s)	2133
BstKTI	GATC	7 cut(s)	247, 562, 598, 952, 1588, 1833, 2083
BstMAI	GTCTC	7 cut(s)	40, 73, 295, 467, 1160, 2087, 2235
BstMBI	GATC	7 cut(s)	244, 559, 595, 949, 1585, 1830, 2080
BstMWI	GCNNNNNNNGC	4 cut(s)	494, 644, 794, 1987
BstNI	CCWGG	5 cut(s)	207, 282, 1849, 1913, 2005
BstNSI	RCATGY	1 cut(s)	911
BstPAI	GACNNNNGTC	1 cut(s)	2099
BstSCI	CCNGG	7 cut(s)	172, 205, 280, 911, 1847, 1911, 2003
BstSFI	CTRYAG	3 cut(s)	529, 636, 1580
BstSLI	GKGCMC	2 cut(s)	861, 1626
BstUI	CGCG	1 cut(s)	2133
BstV1I	GCAGC	3 cut(s)	328, 650, 951
BstV2I	GAAGAC	5 cut(s)	101, 217, 1277, 1425, 1518
BstX2I	RGATCY	2 cut(s)	244, 595
BstYI	RGATCY	2 cut(s)	244, 595
BstZ17I	GTATAC	1 cut(s)	230
BsuI	GTATCC	1 cut(s)	2080
BsuRI	GGCC	7 cut(s)	31, 256, 766, 1197, 1695, 1806, 1847
BtgI	CCRYGG	1 cut(s)	1690
BtsCI	GGATG	6 cut(s)	469, 562, 811, 819, 1722, 2232
BtsIMutI	CAGTG	5 cut(s)	168, 696, 888, 1274, 1749
Cac8I	GCNNGC	2 cut(s)	636, 909
CaiI	CAGNNNCTG	2 cut(s)	80, 1787
CciI	TCATGA	2 cut(s)	615, 1114
Cfr10I	RCCGGY	1 cut(s)	27
Cfr13I	GGNCC	3 cut(s)	158, 254, 1940
CseI	GACGC	2 cut(s)	803, 1046
Csp6I	GTAC	5 cut(s)	333, 833, 1292, 1785, 1983
CviAII	CATG	6 cut(s)	616, 908, 968, 1115, 1437, 1802
CviQI	GTAC	5 cut(s)	333, 833, 1292, 1785, 1983
DpnI	GATC	7 cut(s)	246, 561, 597, 951, 1587, 1832, 2082
DpnII	GATC	7 cut(s)	244, 559, 595, 949, 1585, 1830, 2080
DraI	TTTAAA	1 cut(s)	1492
EaeI	YGGCCR	2 cut(s)	29, 1845
Eam1104I	CTCTTC	3 cut(s)	132, 874, 1737
EarI	CTCTTC	3 cut(s)	132, 874, 1737
Eco130I	CCWWGG	5 cut(s)	216, 393, 677, 1161, 2218
Eco31I	GGTCTC	2 cut(s)	295, 467
Eco32I	GATATC	1 cut(s)	568
Eco47I	GGWCC	2 cut(s)	158, 1940
Eco57I	CTGAAG	3 cut(s)	639, 912, 1764
Eco88I	CYCGRG	1 cut(s)	577
EcoNI	CCTNNNNNAGG	2 cut(s)	1087, 1700
EcoO109I	RGGNCCY	1 cut(s)	254
EcoRI	GAATTC	2 cut(s)	1666, 2008
EcoRII	CCWGG	5 cut(s)	205, 280, 1847, 1911, 2003
EcoRV	GATATC	1 cut(s)	568
EcoT14I	CCWWGG	5 cut(s)	216, 393, 677, 1161, 2218
ErhI	CCWWGG	5 cut(s)	216, 393, 677, 1161, 2218
Esp3I	CGTCTC	2 cut(s)	40, 2087
FaeI	CATG	6 cut(s)	619, 911, 971, 1118, 1440, 1805
FalI	AAGNNNNNCTT	2 cut(s)	1970, 2002
FaqI	GGGAC	2 cut(s)	806, 1368
FatI	CATG	6 cut(s)	615, 907, 967, 1114, 1436, 1801
FauI	CCCGC	1 cut(s)	1237
FbaI	TGATCA	2 cut(s)	949, 1830
FblI	GTMKAC	1 cut(s)	229
Fnu4HI	GCNGC	4 cut(s)	342, 639, 743, 965
FokI	GGATG	6 cut(s)	476, 569, 818, 826, 1729, 2239
Fsp4HI	GCNGC	4 cut(s)	342, 639, 743, 965
FspBI	CTAG	7 cut(s)	453, 504, 678, 696, 1170, 1221, 1808
GluI	GCNGC	4 cut(s)	342, 639, 743, 965
GsaI	CCCAGC	2 cut(s)	792, 963
GsuI	CTGGAG	2 cut(s)	1498, 1987
HaeIII	GGCC	7 cut(s)	31, 256, 766, 1197, 1695, 1806, 1847
HapII	CCGG	4 cut(s)	28, 173, 912, 2057
HgaI	GACGC	2 cut(s)	803, 1046
Hin1I	GRCGYC	1 cut(s)	1057
Hin1II	CATG	6 cut(s)	619, 911, 971, 1118, 1440, 1805
HindIII	AAGCTT	2 cut(s)	272, 2168
HinfI	GANTC	6 cut(s)	169, 995, 1286, 1430, 1729, 1967
HpaII	CCGG	4 cut(s)	28, 173, 912, 2057
HphI	GGTGA	8 cut(s)	479, 727, 959, 1071, 1415, 1559, 1950, 2191
Hpy166II	GTNNAC	5 cut(s)	230, 551, 859, 1051, 2036
Hpy8I	GTNNAC	5 cut(s)	230, 551, 859, 1051, 2036
HpyAV	CCTTC	7 cut(s)	245, 279, 705, 803, 1121, 1468, 1846
HpyCH4IV	ACGT	2 cut(s)	49, 1879
HpyF10VI	GCNNNNNNNGC	4 cut(s)	494, 644, 794, 1987
HpySE526I	ACGT	2 cut(s)	49, 1879
Hsp92I	GRCGYC	1 cut(s)	1057
Hsp92II	CATG	6 cut(s)	619, 911, 971, 1118, 1440, 1805
Ksp22I	TGATCA	2 cut(s)	949, 1830
Kzo9I	GATC	7 cut(s)	244, 559, 595, 949, 1585, 1830, 2080
LmnI	GCTCC	2 cut(s)	196, 679
Lsp1109I	GCAGC	3 cut(s)	328, 650, 951
LweI	GCATC	5 cut(s)	475, 484, 521, 754, 2128
MaeI	CTAG	7 cut(s)	453, 504, 678, 696, 1170, 1221, 1808
MaeII	ACGT	2 cut(s)	49, 1879
MaeIII	GTNAC	4 cut(s)	727, 863, 1010, 1598
MalI	GATC	7 cut(s)	246, 561, 597, 951, 1587, 1832, 2082
MboI	GATC	7 cut(s)	244, 559, 595, 949, 1585, 1830, 2080
MflI	RGATCY	2 cut(s)	244, 595
MhlI	GDGCHC	2 cut(s)	861, 1626
MlsI	TGGCCA	1 cut(s)	1847
MluCI	AATT	9 cut(s)	19, 201, 939, 1318, 1642, 1666, 1684, 1816, 2008
MluNI	TGGCCA	1 cut(s)	1847
MlyI	GAGTC	2 cut(s)	1439, 1976
MmeI	TCCRAC	4 cut(s)	294, 1023, 1641, 2204
Mox20I	TGGCCA	1 cut(s)	1847
MroXI	GAANNNNTTC	1 cut(s)	1573
MscI	TGGCCA	1 cut(s)	1847
MseI	TTAA	9 cut(s)	24, 300, 545, 753, 938, 1491, 1565, 1641, 2246
Msp20I	TGGCCA	1 cut(s)	1847
MspA1I	CMGCKG	1 cut(s)	341
MspCI	CTTAAG	1 cut(s)	1564
MspI	CCGG	4 cut(s)	28, 173, 912, 2057
MspR9I	CCNGG	7 cut(s)	174, 207, 282, 913, 1849, 1913, 2005
Mva1269I	GAATGC	2 cut(s)	825, 1234
MvaI	CCWGG	5 cut(s)	207, 282, 1849, 1913, 2005
MvnI	CGCG	1 cut(s)	2133
MwoI	GCNNNNNNNGC	4 cut(s)	494, 644, 794, 1987
NciI	CCSGG	2 cut(s)	174, 913
NdeII	GATC	7 cut(s)	244, 559, 595, 949, 1585, 1830, 2080
NlaIII	CATG	6 cut(s)	619, 911, 971, 1118, 1440, 1805
NlaIV	GGNNCC	1 cut(s)	705
NmuCI	GTSAC	1 cut(s)	727
NspI	RCATGY	1 cut(s)	911
PaeI	GCATGC	1 cut(s)	911
PagI	TCATGA	2 cut(s)	615, 1114
PasI	CCCWGGG	1 cut(s)	1912
PctI	GAATGC	2 cut(s)	825, 1234
PdmI	GAANNNNTTC	1 cut(s)	1573
PfeI	GAWTC	4 cut(s)	169, 995, 1286, 1729
PflMI	CCANNNNNTGG	1 cut(s)	1660
PfoI	TCCNGGA	3 cut(s)	172, 205, 2003
PkrI	GCNGC	4 cut(s)	343, 640, 744, 966
PleI	GAGTC	2 cut(s)	1438, 1975
PpsI	GAGTC	2 cut(s)	1438, 1975
PshAI	GACNNNNGTC	1 cut(s)	2099
PshBI	ATTAAT	1 cut(s)	938
Psp6I	CCWGG	5 cut(s)	205, 280, 1847, 1911, 2003
PspFI	CCCAGC	2 cut(s)	788, 959
PspGI	CCWGG	5 cut(s)	205, 280, 1847, 1911, 2003
PspN4I	GGNNCC	1 cut(s)	705
PspPI	GGNCC	3 cut(s)	158, 254, 1940
PsrI	GAACNNNNNNTAC	2 cut(s)	1081, 1113
PstI	CTGCAG	1 cut(s)	640
PstNI	CAGNNNCTG	2 cut(s)	80, 1787
PsuI	RGATCY	2 cut(s)	244, 595
PvuII	CAGCTG	1 cut(s)	341
RsaI	GTAC	5 cut(s)	334, 834, 1293, 1786, 1984
RsaNI	GTAC	5 cut(s)	333, 833, 1292, 1785, 1983
SaqAI	TTAA	9 cut(s)	24, 300, 545, 753, 938, 1491, 1565, 1641, 2246
SatI	GCNGC	4 cut(s)	342, 639, 743, 965
Sau3AI	GATC	7 cut(s)	244, 559, 595, 949, 1585, 1830, 2080
Sau96I	GGNCC	3 cut(s)	158, 254, 1940
SchI	GAGTC	2 cut(s)	1439, 1976
ScrFI	CCNGG	7 cut(s)	174, 207, 282, 913, 1849, 1913, 2005
SduI	GDGCHC	2 cut(s)	861, 1626
SfaNI	GCATC	5 cut(s)	475, 484, 521, 754, 2128
SfcI	CTRYAG	3 cut(s)	529, 636, 1580
SinI	GGWCC	2 cut(s)	158, 1940
SmlI	CTYRAG	1 cut(s)	1564
SmoI	CTYRAG	1 cut(s)	1564
SpeI	ACTAGT	2 cut(s)	452, 1169
SphI	GCATGC	1 cut(s)	911
Sse9I	AATT	9 cut(s)	19, 201, 939, 1318, 1642, 1666, 1684, 1816, 2008
SsiI	CCGC	4 cut(s)	742, 1244, 1459, 2133
SspI	AATATT	2 cut(s)	385, 1215
SspMI	CTAG	7 cut(s)	453, 504, 678, 696, 1170, 1221, 1808
StyD4I	CCNGG	7 cut(s)	172, 205, 280, 911, 1847, 1911, 2003
StyI	CCWWGG	5 cut(s)	216, 393, 677, 1161, 2218
TaiI	ACGT	2 cut(s)	52, 1882
TaqI	TCGA	2 cut(s)	778, 2079
TasI	AATT	9 cut(s)	19, 201, 939, 1318, 1642, 1666, 1684, 1816, 2008
TatI	WGTACW	1 cut(s)	1291
TauI	GCSGC	1 cut(s)	745
TfiI	GAWTC	4 cut(s)	169, 995, 1286, 1729
Tru1I	TTAA	9 cut(s)	24, 300, 545, 753, 938, 1491, 1565, 1641, 2246
Tru9I	TTAA	9 cut(s)	24, 300, 545, 753, 938, 1491, 1565, 1641, 2246
TscAI	CASTG	5 cut(s)	168, 696, 895, 1281, 1756
TseFI	GTSAC	1 cut(s)	727
TseI	GCWGC	3 cut(s)	341, 638, 964
Tsp45I	GTSAC	1 cut(s)	727
TspGWI	ACGGA	1 cut(s)	1387
TspRI	CASTG	5 cut(s)	168, 696, 895, 1281, 1756
Van91I	CCANNNNNTGG	1 cut(s)	1660
Vha464I	CTTAAG	1 cut(s)	1564
VneI	GTGCAC	1 cut(s)	857
VpaK11BI	GGWCC	2 cut(s)	158, 1940
VspI	ATTAAT	1 cut(s)	938
XagI	CCTNNNNNAGG	2 cut(s)	1087, 1700
XapI	RAATTY	6 cut(s)	19, 201, 1318, 1666, 1816, 2008
XbaI	TCTAGA	1 cut(s)	503
XceI	RCATGY	1 cut(s)	911
XmaJI	CCTAGG	1 cut(s)	677
XmiI	GTMKAC	1 cut(s)	229
XmnI	GAANNNNTTC	1 cut(s)	1573
XspI	CTAG	7 cut(s)	453, 504, 678, 696, 1170, 1221, 1808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.