Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001361

Physical Location & Seq

Genomic Coordinates Forward (+)

13977881 .. 13983609

Gene Structure 5729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G32950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGAAGAGATTTCGACGGATCCGGTTGTTCCAGCGGTGAAACCTGACCCGAGAACATCTTCAGTTGGTGAAGGTGCTAATCGTCATGAAAATGACGACGGAGGAAGCGGCGGTTCTGAGATTGGAGCACCGGATCTGGATAAAGACTTGCTTTGTCCGATTTGTATGCAGATTATTAAAGATGCTTTCCTCACGGCTTGTGGTCATAGTTTCTGCTATATGTGTATCATCACACATCTTAGGAACAAGAGTGATTGTCCCTGTTGTAGCCAACACCTCACCAATAATCAGCTTTACCCTAATTTCTTGCTCGATAAGCTATTGAAGAAAACTTCAGCTCGGCATGTGTCAAAAACTGCATCGCCCTTGGATCAGTTTCGGGAAGCACTACAAAGGGGTTGTGATGTGTCAATTAAGGAGGTTGATAATCTTCTGACACTTCTTGCGGAAAGGAAGAGAAAAATGGAACAGGAAGAAGCTGAGAGGAACATGCAGATACTTTTGGACTTTTTGCATTGTCTAAGGAAGCAAAAAGTTGATGAACTAAATGAGGTGCAAACTGATCTCCAGTATATTAAAGAAGATATAAATGCCGTTGAGAGACATAGAATAGATTTATACCGAGCTAGGGACAGATATTCTGTAAAGTTGCGGATGCTCGGAGATGATCCAAGCACAAGAAATGCATGGCCACATGAGAAGAACCAGATTGGTTTCAACTCCAATTCTCTCAGCATAAGAGGAGGAAATTTTGTAGGCAATTATCAAAACAAAAAGGTAGAGGGGAAGGCACAAGGAAGCTCTCATGGGCTACCAAAGAAGGATGCGCTGAGTGGGTCAGATTCGCAAAGTTTGAATCAGTCAACTGTCTCAATGGCTAGAAAGAAACGGATTCATGCTCAGTTCAATGATTTACAAGAATGTTACCTCCAAAAGCGGCGTCAGTTGGCAGACCAACCAAATAGTAAACAAGAAAATGATAAGAGTGTAGTACGGAGGGAAGGCTATAGCAACGGCCTTGCAGATTTTCAATCTGTGTTGACTACCTTCACTCGCTACAGTCGTCTAAGAGTTATAGCAGAAATCCGGCATGGGGATATATTTCATTCAGCCAACATTGTATCAAGCATAGAGTTTGATCGTGATGATGAGCTGTTTGCCACTGCTGGTGTTTCTAGATGTATAAAGGTTTTTGACTTCTCTTCGGTTGTAAATGAACCAGCAGATATGCAGTGTCCGATTGTGGAGATGTCAACTCGGTCTAAACTTAGTTGCTTGAGTTGGAATAAGCATGAAAAAAATCACATAGCAAGCAGTGATTATGAAGGAATAGTAACAGTGTGGGATGTAACTACTAGGCAGAGTCTTATGGAGTATGAAGAGCACGAAAAACGTGCCTGGAGTGTTGACTTTTCACGAACAGAACCATCAATGCTTGTATCTGGTAGTGACGACTGCAAGGTTAAAGTTTGGTGCACGAGGCAGGAAGCAAGTGTGATTAATATTGATATGAAAGCAAACATATGTTGTGTCAAGTACAATCCTGGCTCAAGCAACTACATTGCGGTCGGATCAGCTGATCATCACATCCATTATTACGATCTAAGAAACATAAGCCAACCACTTCATGTCTTCAGTGGACACAAGAAAGCAGTTTCCTATGTTAAATTTTTGTCCAACAACGAGCTCGCTTCTGCGTCCACAGATAGCACACTACGCTTATGGGATGTCAAAGACAACTTGCCAGTTCGAACATTCAGAGGACATACTAACGAGAAGAACTTTGTGGGTCTCACAGTGAACAGCGAGTATCTCGCCTGTGGAAGCGAGACAAACGAAGTATATGTATATCACAAGGAAATCACGAGACCCGTGACATCGCACAGATTTGGATCGCCAGACATGGACGATGCAGAGGAAGAGGCAGGTTCCTACTTTATTAGTGCGGTTTGCTGGAAGAGTGATAGTCCCACGATGTTGACTGCGAATAGTCAAGGAACCATCAAAGTTCTGGTACTCGCTGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009628 GO:0009639 GO:0009640 GO:0009641 GO:0009642 GO:0009646 GO:0009647 GO:0009648 GO:0009649 GO:0009791 GO:0009812 GO:0009987 GO:0010119 GO:0010228 GO:0016567 GO:0016604 GO:0016740 GO:0019538 GO:0019787 GO:0022414 GO:0031461 GO:0031974 GO:0031981 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0036211 GO:0042440 GO:0042752 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046283 GO:0046483 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080008 GO:0090304 GO:0140096 GO:1901360 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04115 ko04120 ko04712 map04115 map04120 map04712

Pfam Domains

Protein Families

WD40 zf-C3HC4_2

Protein Analysis

675

Amino Acids

76.19

Weight (kDa)

6.38

Isoelectric Point (pI)

47.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_3	PF13920	49 - 94	3.5e-06	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	52 - 89	2.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2	PF13923	52 - 89	1.2e-10	Zinc finger, C3HC4 type (RING finger)
Beta-prop_WDR3_1st	PF25173	371 - 497	2.1e-12	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	372 - 620	1.2e-34	WDR5 beta-propeller domain
Beta-prop_RIG_2nd	PF23775	372 - 454	1.4e-06	RIG second beta-propeller
Beta-prop_WDR3_2nd	PF25172	376 - 531	6.4e-06	WDR3 second beta-propeller domain
WD40_MABP1-WDR62_1st	PF24780	411 - 535	3.2e-06	MABP1/WDR62 first WD40 domain
WD40_Prp19	PF24814	418 - 499	1.7e-08	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	420 - 515	1.3e-11	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	420 - 537	1.8e-17	THOC3 beta-propeller domain
WD40_Gbeta	PF25391	422 - 546	2.1e-06	G protein beta WD-40 repeat protein
WD40_MABP1-WDR62_2nd	PF24782	431 - 616	1.7e-09	MABP1/WDR62 second WD40 domain
Beta-prop_EML_2	PF23414	431 - 579	5.1e-15	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_EML	PF23409	438 - 619	4.6e-09	Echinoderm microtubule-associated protein first beta-propeller
WD40_WDHD1_1st	PF24817	477 - 595	7e-14	WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	477 - 617	6.6e-12	WDR36/Utp21 second beta-propeller domain
Beta-prop_EIPR1	PF23609	498 - 575	4.6e-06	EIPR1 beta-propeller
WDR55	PF24796	501 - 670	1e-06	WDR55
Beta-prop_WDR3_1st	PF25173	504 - 612	4.4e-16	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	505 - 592	1.5e-08	TEP-1 second beta-propeller
WD40_Prp19	PF24814	505 - 625	3.1e-14	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	507 - 626	2.9e-11	CDC20/Fizzy WD40 domain
WD40_like	PF17005	511 - 622	2.9e-06	WD40-like domain
WD40_Gbeta	PF25391	519 - 612	2.8e-06	G protein beta WD-40 repeat protein
WD40	PF00400	540 - 576	9.9e-07	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	544 - 671	1e-12	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32950 AT2G32950
fragaria_vesca	FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_5g22570 FvH4_5g22570
malus_domestica	MD06G1037700.v1.1 MD10G1328500.v1.1 MD15G1405100.v1.1 MD15G1405200.v1.1 MD16G1272200.v1.1
prunus_persica	Prupe.4G013500_v2.0.a1 Prupe.5G031300_v2.0.a1 Prupe.5G031300_v2.0.a1 Prupe.5G031300_v2.0.a1 Prupe.5G031300_v2.0.a1
pyrus_communis	pycom10g27830 pycom16g24110
rosa_chinensis	RchiOBHm_Chr5g0001791 RchiOBHm_Chr7g0210341
rosa_laevigata	RLG00000003045 RLG00000030973
rosa_multiflora	Rmu_co8137394.1_g000001 Rmu_sc0003807.1_g000002 Rmu_ssc0000237.1_g000012
rosa_roxburghii	Rroxscaffold_1G00071250 Rroxscaffold_1G00074540 Rroxscaffold_3G00248380
rosa_rugosa	Rorug04G0393100 Rorug04G0393200 Rorug04G0393300 Rorug07G0121200 Rorug07G0121200 Rorug07G0121300
rosa_samantha	Rh5AG014400 Rh5BG017800 Rh5CG015500 Rh5DG015900 Rh7AG253900 Rh7BG248800 Rh7CG270700 Rh7DG261400
rosa_wichuraiana	Rw5G001390 Rw7G021640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1916
AciI	CCGC	8 cut(s)	35, 108, 111, 446, 652, 937, 1565, 1946
AclWI	GGATC	7 cut(s)	14, 27, 141, 378, 662, 1579, 1900
AcoI	YGGCCR	1 cut(s)	689
AcsI	RAATTY	2 cut(s)	748, 1667
AcuI	CTGAAG	3 cut(s)	45, 318, 1618
AcyI	GRCGYC	1 cut(s)	940
AfaI	GTAC	3 cut(s)	993, 1538, 2016
AfiI	CCNNNNNNNGG	2 cut(s)	628, 1093
AgsI	TTSAA	5 cut(s)	325, 718, 856, 907, 1031
AjnI	CCWGG	2 cut(s)	1397, 1543
AluBI	AGCT	9 cut(s)	292, 319, 338, 479, 626, 801, 1153, 1577, 1687
AluI	AGCT	9 cut(s)	292, 319, 338, 479, 626, 801, 1153, 1577, 1687
Alw21I	GWGCWC	4 cut(s)	130, 1386, 1478, 1689
Alw26I	GTCTC	5 cut(s)	595, 874, 1796, 1823, 1861
Alw44I	GTGCAC	1 cut(s)	1474
AlwI	GGATC	7 cut(s)	14, 27, 141, 378, 662, 1579, 1900
Ama87I	CYCGRG	1 cut(s)	49
AoxI	GGCC	2 cut(s)	689, 1015
ApaLI	GTGCAC	1 cut(s)	1474
ApeKI	GCWGC	1 cut(s)	2021
ApoI	RAATTY	2 cut(s)	748, 1667
ArsI	GACNNNNNNTTYG	2 cut(s)	925, 957
AseI	ATTAAT	1 cut(s)	1500
Asp700I	GAANNNNTTC	1 cut(s)	58
AspLEI	GCGC	1 cut(s)	829
AsuHPI	GGTGA	3 cut(s)	49, 80, 271
AsuII	TTCGAA	1 cut(s)	1750
AvaI	CYCGRG	1 cut(s)	49
BaeGI	GKGCMC	1 cut(s)	1478
BalI	TGGCCA	1 cut(s)	691
BamHI	GGATCC	1 cut(s)	19
BanII	GRGCYC	1 cut(s)	1689
BauI	CACGAG	2 cut(s)	1477, 1864
BbsI	GAAGAC	1 cut(s)	1624
Bbv12I	GWGCWC	4 cut(s)	130, 1386, 1478, 1689
BbvI	GCAGC	1 cut(s)	2008
BccI	CCATC	2 cut(s)	1435, 2009
BceAI	ACGGC	3 cut(s)	210, 578, 1030
BcgI	CGANNNNNNTGC	4 cut(s)	148, 182, 1376, 1410
BciT130I	CCWGG	2 cut(s)	1399, 1545
BclI	TGATCA	1 cut(s)	1579
BcoDI	GTCTC	5 cut(s)	595, 874, 1796, 1823, 1861
BfaI	CTAG	4 cut(s)	627, 879, 1176, 1356
BfmI	CTRYAG	2 cut(s)	1006, 1057
BfuAI	ACCTGC	1 cut(s)	1916
BisI	GCNGC	3 cut(s)	109, 938, 2022
BlsI	GCNGC	3 cut(s)	110, 939, 2023
Bme1390I	CCNGG	2 cut(s)	1399, 1545
BmeT110I	CYCGRG	1 cut(s)	49
BmiI	GGNNCC	3 cut(s)	21, 1930, 1999
BmrFI	CCNGG	2 cut(s)	1399, 1545
BmsI	GCATC	5 cut(s)	172, 368, 645, 814, 1900
BpiI	GAAGAC	1 cut(s)	1624
BpmI	CTGGAG	2 cut(s)	551, 1420
Bpu14I	TTCGAA	1 cut(s)	1750
BpuEI	CTTGAG	2 cut(s)	1297, 1534
BsaBI	GATNNNNATC	1 cut(s)	1891
BsaHI	GRCGYC	1 cut(s)	940
BsaI	GGTCTC	2 cut(s)	1796, 1861
BsaJI	CCNNGG	1 cut(s)	366
BsaWI	WCCGGW	2 cut(s)	22, 130
Bsc4I	CCNNNNNNNGG	2 cut(s)	628, 1093
Bse1I	ACTGG	2 cut(s)	568, 1745
Bse3DI	GCAATG	1 cut(s)	1560
Bse8I	GATNNNNATC	1 cut(s)	1891
BseBI	CCWGG	2 cut(s)	1399, 1545
BseDI	CCNNGG	1 cut(s)	366
BseGI	GGATG	5 cut(s)	660, 829, 1351, 1587, 1732
BseJI	GATNNNNATC	1 cut(s)	1891
BseLI	CCNNNNNNNGG	2 cut(s)	628, 1093
BseMI	GCAATG	1 cut(s)	1560
BseMII	CTCAG	5 cut(s)	108, 471, 745, 821, 914
BseNI	ACTGG	2 cut(s)	568, 1745
BseRI	GAGGAG	1 cut(s)	756
BseSI	GKGCMC	1 cut(s)	1478
BseXI	GCAGC	1 cut(s)	2008
Bsh1285I	CGRYCG	1 cut(s)	1569
BshFI	GGCC	2 cut(s)	691, 1017
BsiEI	CGRYCG	1 cut(s)	1569
BsiHKAI	GWGCWC	4 cut(s)	130, 1386, 1478, 1689
BsiHKCI	CYCGRG	1 cut(s)	49
BsiSI	CCGG	3 cut(s)	23, 131, 1087
BslFI	GGGAC	3 cut(s)	243, 644, 1953
BslI	CCNNNNNNNGG	2 cut(s)	628, 1093
BsmAI	GTCTC	5 cut(s)	595, 874, 1796, 1823, 1861
BsmFI	GGGAC	3 cut(s)	243, 644, 1953
BsnI	GGCC	2 cut(s)	691, 1017
Bso31I	GGTCTC	2 cut(s)	1796, 1861
BsoBI	CYCGRG	1 cut(s)	49
Bsp119I	TTCGAA	1 cut(s)	1750
Bsp1286I	GDGCHC	4 cut(s)	130, 1386, 1478, 1689
BspACI	CCGC	8 cut(s)	35, 108, 111, 446, 652, 937, 1565, 1946
BspANI	GGCC	2 cut(s)	691, 1017
BspCNI	CTCAG	5 cut(s)	109, 472, 744, 822, 913
BspHI	TCATGA	1 cut(s)	85
BspLI	GGNNCC	3 cut(s)	21, 1930, 1999
BspMI	ACCTGC	1 cut(s)	1916
BspPI	GGATC	7 cut(s)	14, 27, 141, 378, 662, 1579, 1900
BspQI	GCTCTTC	1 cut(s)	1374
BspT104I	TTCGAA	1 cut(s)	1750
BspTNI	GGTCTC	2 cut(s)	1796, 1861
BsrDI	GCAATG	1 cut(s)	1560
BsrI	ACTGG	2 cut(s)	568, 1745
BssECI	CCNNGG	1 cut(s)	366
BssNI	GRCGYC	1 cut(s)	940
BssSI	CACGAG	2 cut(s)	1477, 1864
BssT1I	CCWWGG	1 cut(s)	366
Bst2BI	CACGAG	2 cut(s)	1477, 1864
Bst2UI	CCWGG	2 cut(s)	1399, 1545
Bst4CI	ACNGT	4 cut(s)	868, 1061, 1339, 1798
Bst6I	CTCTTC	5 cut(s)	449, 1207, 1374, 1914, 1952
BstACI	GRCGYC	1 cut(s)	940
BstBI	TTCGAA	1 cut(s)	1750
BstC8I	GCNNGC	2 cut(s)	1312, 1689
BstF5I	GGATG	5 cut(s)	660, 829, 1351, 1587, 1732
BstHHI	GCGC	1 cut(s)	829
BstMAI	GTCTC	5 cut(s)	595, 874, 1796, 1823, 1861
BstMCI	CGRYCG	1 cut(s)	1569
BstMWI	GCNNNNNNNGC	2 cut(s)	316, 1716
BstNI	CCWGG	2 cut(s)	1399, 1545
BstNSI	RCATGY	2 cut(s)	347, 493
BstSCI	CCNGG	2 cut(s)	1397, 1543
BstSFI	CTRYAG	2 cut(s)	1006, 1057
BstSLI	GKGCMC	1 cut(s)	1478
BstV1I	GCAGC	1 cut(s)	2008
BstV2I	GAAGAC	1 cut(s)	1624
BstX2I	RGATCY	2 cut(s)	19, 133
BstYI	RGATCY	2 cut(s)	19, 133
BsuRI	GGCC	2 cut(s)	691, 1017
BtgZI	GCGATG	2 cut(s)	345, 1863
BtsCI	GGATG	5 cut(s)	660, 829, 1351, 1587, 1732
BtsI	GCAGTG	3 cut(s)	1161, 1238, 1321
BtsIMutI	CAGTG	6 cut(s)	1161, 1238, 1321, 1344, 1642, 1803
BveI	ACCTGC	1 cut(s)	1916
Cac8I	GCNNGC	2 cut(s)	1312, 1689
CciI	TCATGA	1 cut(s)	85
CfoI	GCGC	1 cut(s)	829
CseI	GACGC	2 cut(s)	929, 1686
Csp6I	GTAC	3 cut(s)	992, 1537, 2015
CviQI	GTAC	3 cut(s)	992, 1537, 2015
EaeI	YGGCCR	1 cut(s)	689
Eam1104I	CTCTTC	5 cut(s)	449, 1207, 1374, 1914, 1952
EarI	CTCTTC	5 cut(s)	449, 1207, 1374, 1914, 1952
Ecl136II	GAGCTC	1 cut(s)	1687
Eco130I	CCWWGG	1 cut(s)	366
Eco24I	GRGCYC	1 cut(s)	1689
Eco31I	GGTCTC	2 cut(s)	1796, 1861
Eco53kI	GAGCTC	1 cut(s)	1687
Eco57I	CTGAAG	3 cut(s)	45, 318, 1618
Eco88I	CYCGRG	1 cut(s)	49
EcoICRI	GAGCTC	1 cut(s)	1687
EcoRII	CCWGG	2 cut(s)	1397, 1543
EcoT14I	CCWWGG	1 cut(s)	366
EcoT22I	ATGCAT	1 cut(s)	688
EcoT38I	GRGCYC	1 cut(s)	1689
ErhI	CCWWGG	1 cut(s)	366
FalI	AAGNNNNNCTT	2 cut(s)	135, 167
FaqI	GGGAC	3 cut(s)	243, 644, 1953
FauNDI	CATATG	1 cut(s)	1523
FbaI	TGATCA	1 cut(s)	1579
Fnu4HI	GCNGC	3 cut(s)	109, 938, 2022
FokI	GGATG	5 cut(s)	667, 836, 1358, 1574, 1739
FriOI	GRGCYC	1 cut(s)	1689
Fsp4HI	GCNGC	3 cut(s)	109, 938, 2022
FspBI	CTAG	4 cut(s)	627, 879, 1176, 1356
GlaI	GCGC	1 cut(s)	828
GluI	GCNGC	3 cut(s)	109, 938, 2022
GsuI	CTGGAG	2 cut(s)	551, 1420
HaeIII	GGCC	2 cut(s)	691, 1017
HapII	CCGG	3 cut(s)	23, 131, 1087
HgaI	GACGC	2 cut(s)	929, 1686
HhaI	GCGC	1 cut(s)	829
Hin1I	GRCGYC	1 cut(s)	940
Hin6I	GCGC	1 cut(s)	827
HinP1I	GCGC	1 cut(s)	827
HincII	GTYRAC	5 cut(s)	864, 1041, 1254, 1408, 1980
HindII	GTYRAC	5 cut(s)	864, 1041, 1254, 1408, 1980
HinfI	GANTC	4 cut(s)	842, 856, 892, 1363
HpaII	CCGG	3 cut(s)	23, 131, 1087
HphI	GGTGA	3 cut(s)	49, 80, 271
Hpy188I	TCNGA	8 cut(s)	118, 159, 435, 662, 841, 1239, 1571, 1760
Hpy188III	TCNNGA	7 cut(s)	86, 137, 380, 1142, 1176, 1416, 1864
Hpy99I	CGWCG	2 cut(s)	19, 101
HpyAV	CCTTC	6 cut(s)	65, 781, 814, 995, 1057, 1319
HpyCH4III	ACNGT	4 cut(s)	868, 1061, 1339, 1798
HpyCH4IV	ACGT	1 cut(s)	1393
HpyF10VI	GCNNNNNNNGC	2 cut(s)	316, 1716
HpySE526I	ACGT	1 cut(s)	1393
Hsp92I	GRCGYC	1 cut(s)	940
HspAI	GCGC	1 cut(s)	827
Ksp22I	TGATCA	1 cut(s)	1579
LguI	GCTCTTC	1 cut(s)	1374
LmnI	GCTCC	1 cut(s)	125
Lsp1109I	GCAGC	1 cut(s)	2008
LweI	GCATC	5 cut(s)	172, 368, 645, 814, 1900
MaeI	CTAG	4 cut(s)	627, 879, 1176, 1356
MaeII	ACGT	1 cut(s)	1393
MaeIII	GTNAC	5 cut(s)	923, 1333, 1348, 1448, 1873
MflI	RGATCY	2 cut(s)	19, 133
MhlI	GDGCHC	4 cut(s)	130, 1386, 1478, 1689
MlsI	TGGCCA	1 cut(s)	691
MluCI	AATT	6 cut(s)	301, 411, 724, 748, 760, 1667
MluNI	TGGCCA	1 cut(s)	691
MlyI	GAGTC	1 cut(s)	1372
MmeI	TCCRAC	3 cut(s)	1262, 1549, 1701
Mox20I	TGGCCA	1 cut(s)	691
Mph1103I	ATGCAT	1 cut(s)	688
MroXI	GAANNNNTTC	1 cut(s)	58
MscI	TGGCCA	1 cut(s)	691
MseI	TTAA	6 cut(s)	177, 414, 576, 1464, 1500, 1665
MslI	CAYNNNNRTG	1 cut(s)	90
Msp20I	TGGCCA	1 cut(s)	691
MspA1I	CMGCKG	2 cut(s)	35, 1577
MspI	CCGG	3 cut(s)	23, 131, 1087
MspR9I	CCNGG	2 cut(s)	1399, 1545
MvaI	CCWGG	2 cut(s)	1399, 1545
MwoI	GCNNNNNNNGC	2 cut(s)	316, 1716
NdeI	CATATG	1 cut(s)	1523
NlaIV	GGNNCC	3 cut(s)	21, 1930, 1999
NmeAIII	GCCGAG	1 cut(s)	319
NmuCI	GTSAC	2 cut(s)	1448, 1873
NsiI	ATGCAT	1 cut(s)	688
NspI	RCATGY	2 cut(s)	347, 493
NspV	TTCGAA	1 cut(s)	1750
PagI	TCATGA	1 cut(s)	85
PciSI	GCTCTTC	1 cut(s)	1374
PcsI	WCGNNNNNNNCGW	1 cut(s)	1060
PdmI	GAANNNNTTC	1 cut(s)	58
PfeI	GAWTC	3 cut(s)	842, 856, 892
PkrI	GCNGC	3 cut(s)	110, 939, 2023
PleI	GAGTC	1 cut(s)	1371
PpsI	GAGTC	1 cut(s)	1371
PshBI	ATTAAT	1 cut(s)	1500
Psp124BI	GAGCTC	1 cut(s)	1689
Psp6I	CCWGG	2 cut(s)	1397, 1543
PspGI	CCWGG	2 cut(s)	1397, 1543
PspN4I	GGNNCC	3 cut(s)	21, 1930, 1999
PsuI	RGATCY	2 cut(s)	19, 133
PvuII	CAGCTG	1 cut(s)	1577
RsaI	GTAC	3 cut(s)	993, 1538, 2016
RsaNI	GTAC	3 cut(s)	992, 1537, 2015
RseI	CAYNNNNRTG	1 cut(s)	90
SacI	GAGCTC	1 cut(s)	1689
SapI	GCTCTTC	1 cut(s)	1374
SaqAI	TTAA	6 cut(s)	177, 414, 576, 1464, 1500, 1665
SatI	GCNGC	3 cut(s)	109, 938, 2022
SchI	GAGTC	1 cut(s)	1372
ScrFI	CCNGG	2 cut(s)	1399, 1545
SduI	GDGCHC	4 cut(s)	130, 1386, 1478, 1689
SfaNI	GCATC	5 cut(s)	172, 368, 645, 814, 1900
SfcI	CTRYAG	2 cut(s)	1006, 1057
SfuI	TTCGAA	1 cut(s)	1750
SmiMI	CAYNNNNRTG	1 cut(s)	90
SmlI	CTYRAG	2 cut(s)	1276, 1549
SmoI	CTYRAG	2 cut(s)	1276, 1549
Sse9I	AATT	6 cut(s)	301, 411, 724, 748, 760, 1667
SsiI	CCGC	8 cut(s)	35, 108, 111, 446, 652, 937, 1565, 1946
SspI	AATATT	1 cut(s)	1504
SspMI	CTAG	4 cut(s)	627, 879, 1176, 1356
SstI	GAGCTC	1 cut(s)	1689
StyD4I	CCNGG	2 cut(s)	1397, 1543
StyI	CCWWGG	1 cut(s)	366
TaaI	ACNGT	4 cut(s)	868, 1061, 1339, 1798
TaiI	ACGT	1 cut(s)	1396
TaqI	TCGA	3 cut(s)	14, 312, 1750
TaqII	GACCGA	1 cut(s)	1248
TasI	AATT	6 cut(s)	301, 411, 724, 748, 760, 1667
TatI	WGTACW	1 cut(s)	1536
TauI	GCSGC	2 cut(s)	111, 940
TfiI	GAWTC	3 cut(s)	842, 856, 892
Tru1I	TTAA	6 cut(s)	177, 414, 576, 1464, 1500, 1665
Tru9I	TTAA	6 cut(s)	177, 414, 576, 1464, 1500, 1665
TscAI	CASTG	6 cut(s)	1168, 1238, 1321, 1344, 1642, 1803
TseFI	GTSAC	2 cut(s)	1448, 1873
TseI	GCWGC	1 cut(s)	2021
Tsp45I	GTSAC	2 cut(s)	1448, 1873
TspGWI	ACGGA	4 cut(s)	32, 114, 904, 1009
TspRI	CASTG	6 cut(s)	1168, 1238, 1321, 1344, 1642, 1803
VneI	GTGCAC	1 cut(s)	1474
VspI	ATTAAT	1 cut(s)	1500
XapI	RAATTY	2 cut(s)	748, 1667
XbaI	TCTAGA	1 cut(s)	1175
XceI	RCATGY	2 cut(s)	347, 493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2008
XmnI	GAANNNNTTC	1 cut(s)	58
XspI	CTAG	4 cut(s)	627, 879, 1176, 1356
Zsp2I	ATGCAT	1 cut(s)	688

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.