Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0001361

Physical Location & Seq

Genomic Coordinates Reverse (-)

28698741 .. 28702693

Gene Structure 3953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g27830.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGGGAGAGAGCTCAATGGGTGGTGCGCTGGTCCCCACCGTGAAATCCGAACACTTCACGGACTCCGCCGCCGAAACGGCGCCGTTTGACGACGAGCCGGACAAGGACATGACGTGTCCGATATGCATGCAGATCATCAGAGACGCCTTCCTCACCGCCTGCGGCCATAGTTTTTGCCACGTCTGCATTTCAACTCACCTCCGCATCAAGAGCGATTGCCCTTGCTGCGCTAGCTCCCTCACCCCGGCCAGCATTTTCCCCAATTTCTTGCTCGACAAGTTGCTGAAAAATGCTTTGGATTCTCGGATGGCGAAGAATGCATCTCCGTTTGAACTTCTTAGTCGGGAATTGAACAAGGGCTGCGAGATTTCGATCAAAGAGCTGGACGGCCTTTTGTCCTTGCTTGAAGAGAAGAGGAGAAAAATGGAGCTACAAGAAGCCGAGAAAAGCATGGACATCATGCTTAGCTTCTTACATTGTCTGAGAAGGCAAAAGCTTCAAGAGCTCAATGAGTTAGAGGCCGATCTCAGGTACATCGAGGAGGACATTACTGCCGTTGAGAGGCATAGACTAGAACTATGCAGCTGGGAACAGGAGAGGTCCGCAAAGCTGAGAATGCTTGTTCCCGGTGATCAGCATGGCAACGGCATTGCCTGCAGCACGCAATATGTGCAAGACCGGATGAGTTCTTTCAACCTACAGAACAAGAGAGCTGATGTAAACGGGCAATCAAGCTCCAAGTTGCTCCAACTGAAGGATGCTTATGGAAGGTCTGAAATGCTGTGTGTTACAACACCAGGAGCACTATCACTAGCAAGAAAAAGGCGTGTCCATTCGCAGTTTAATGATCTACAAGAGTGCTACTTGCAAAAGCGACGAAATTGGAACAGACAGGAAGAGGACACAAACACCATGGACATAGAAGGTTACAATCCAGGCCTTGAAGATTTTCAATCTGTGTTTGCAAGCTTTACACAATACAGTCGATTGAGAGTCATTGCTGAACTGAGTCACGGTGATCTTTTTCACTCTGCTAATATTGTGTCAAGTATAGAATTTGATCGTGATGAAGAGCTCTTTGCTACTGCTGGAGTTTCACGGTGCATCAAGGTTTTTGAATTTTCCTCGCTGGTTAACGAACCAACCGATATCCACTGTCCTATTGTGGAGTTATCCTCACGATCCAAACTTAGTTGCTTGAGCTGGAATATGTACACTAAAAACCATATTGCTAGTAGCGACTACGAGGGGATAGTAACTGTTTGGGATGTAAATACTCGTCAGAGTATGATGGAATATGAGGAGCATGAAAAGCGAGCTTGGAGCGTTGATTTTTCATGCACCGATCCTTCAATGCTTGTGTCCGGAAGTGATGACTGCAAGGTCAAAATTTGGTGCACAAAGCAAGAAGTAAGTGTTCTTAACATCGACATGAAGGCAAATATATGTTCTGTCAAGTATAATCCTGGATCCAGCTTTTTCGTGGCAGTTGGCTCTGCTGACCATCACATTCATTATTATGACTTGAGAAACATCAGCCAACCACTGCACCTGTTCCGTGGGCATAGAAAAGCTGTTTCGTATGTAAAATTCTTGTCTAACAACGAACTTGCTTCTGCATCCACTGACAGCACACTGCGGTTGTGGGACGTAAAGGAAAACTTGCCTTTGTGCATGTACAGAGGCCACATGAACGAGAAGAACTTTGTAGGTCTTGCGGTAAATAATGAATACATTGCTTGCGGCAGCGAGACAAATGAACTATTCGTATACCACAAGGCTATCTCGAAACCTATGACTTGGCACAGATTTGGCTCTTCGGATTTAGGCGATAATGATGGCTATCCAGGACCATACTTTATCAGTGCGGTATGTTGGAAGAGGGATAGCCCTATGATATTGACTGCAAACAGTCAAGGAACGATTAAAGTGCTCGTACTTGCAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009628 GO:0009639 GO:0009640 GO:0009641 GO:0009642 GO:0009646 GO:0009647 GO:0009648 GO:0009649 GO:0009791 GO:0009812 GO:0009987 GO:0010119 GO:0010228 GO:0016567 GO:0016604 GO:0016740 GO:0019538 GO:0019787 GO:0022414 GO:0031461 GO:0031974 GO:0031981 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0036211 GO:0042440 GO:0042752 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046283 GO:0046483 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080008 GO:0090304 GO:0140096 GO:1901360 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04115 ko04120 ko04712 map04115 map04120 map04712

Pfam Domains

Protein Families

WD40 zf-C3HC4_2

Protein Analysis

650

Amino Acids

73.55

Weight (kDa)

5.76

Isoelectric Point (pI)

56.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32950 AT2G32950
fragaria_vesca	FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_5g22570 FvH4_5g22570
malus_domestica	MD06G1037700.v1.1 MD10G1328500.v1.1 MD15G1405100.v1.1 MD15G1405200.v1.1 MD16G1272200.v1.1
prunus_persica	Prupe.4G013500_v2.0.a1 Prupe.5G031300_v2.0.a1 Prupe.5G031300_v2.0.a1 Prupe.5G031300_v2.0.a1 Prupe.5G031300_v2.0.a1
pyrus_communis	pycom10g27830 pycom16g24110
rosa_chinensis	RchiOBHm_Chr5g0001791 RchiOBHm_Chr7g0210341
rosa_laevigata	RLG00000003045 RLG00000030973
rosa_multiflora	Rmu_co8137394.1_g000001 Rmu_sc0003807.1_g000002 Rmu_ssc0000237.1_g000012
rosa_roxburghii	Rroxscaffold_1G00071250 Rroxscaffold_1G00074540 Rroxscaffold_3G00248380
rosa_rugosa	Rorug04G0393100 Rorug04G0393200 Rorug04G0393300 Rorug07G0121200 Rorug07G0121200 Rorug07G0121300
rosa_samantha	Rh5AG014400 Rh5BG017800 Rh5CG015500 Rh5DG015900 Rh7AG253900 Rh7BG248800 Rh7CG270700 Rh7DG261400
rosa_wichuraiana	Rw5G001390 Rw7G021640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1382
AccB1I	GGYRCC	1 cut(s)	79
AccI	GTMKAC	1 cut(s)	1770
AccIII	TCCGGA	1 cut(s)	1364
AclWI	GGATC	4 cut(s)	1176, 1340, 1464, 1477
AcoI	YGGCCR	2 cut(s)	163, 246
AcsI	RAATTY	4 cut(s)	1055, 1118, 1389, 1589
AcuI	CTGAAG	1 cut(s)	773
AcyI	GRCGYC	2 cut(s)	80, 144
AfaI	GTAC	4 cut(s)	533, 1214, 1679, 1938
AfiI	CCNNNNNNNGG	4 cut(s)	244, 528, 561, 754
AflIII	ACRYGT	1 cut(s)	113
AjiI	CACGTC	2 cut(s)	114, 181
AjnI	CCWGG	4 cut(s)	796, 934, 1465, 1846
AjuI	GAANNNNNNNTTGG	2 cut(s)	278, 310
Alw21I	GWGCWC	6 cut(s)	14, 507, 805, 1077, 1400, 1935
Alw26I	GTCTC	2 cut(s)	135, 1745
Alw44I	GTGCAC	1 cut(s)	1396
AlwI	GGATC	4 cut(s)	1176, 1340, 1464, 1477
Aor13HI	TCCGGA	1 cut(s)	1364
AoxI	GGCC	6 cut(s)	163, 246, 388, 519, 937, 1684
ApaLI	GTGCAC	1 cut(s)	1396
ApeKI	GCWGC	6 cut(s)	225, 360, 582, 657, 1746, 1943
ApoI	RAATTY	4 cut(s)	1055, 1118, 1389, 1589
Asp700I	GAANNNNTTC	1 cut(s)	948
AspLEI	GCGC	3 cut(s)	28, 82, 230
AspS9I	GGNCC	3 cut(s)	31, 600, 1850
AsuC2I	CCSGG	2 cut(s)	245, 627
AsuHPI	GGTGA	5 cut(s)	145, 188, 232, 641, 1028
AsuNHI	GCTAGC	1 cut(s)	230
AvaII	GGWCC	3 cut(s)	31, 600, 1850
BaeGI	GKGCMC	1 cut(s)	1400
BamHI	GGATCC	1 cut(s)	1469
BanI	GGYRCC	1 cut(s)	79
BanII	GRGCYC	3 cut(s)	14, 507, 1077
Bbv12I	GWGCWC	6 cut(s)	14, 507, 805, 1077, 1400, 1935
BbvI	GCAGC	5 cut(s)	212, 347, 594, 669, 1758
BccI	CCATC	4 cut(s)	301, 1285, 1512, 1832
BceAI	ACGGC	5 cut(s)	67, 93, 403, 539, 661
BcgI	CGANNNNNNTGC	4 cut(s)	109, 143, 1912, 1946
BciT130I	CCWGG	4 cut(s)	798, 936, 1467, 1848
BclI	TGATCA	1 cut(s)	631
BcnI	CCSGG	2 cut(s)	245, 627
BcoDI	GTCTC	2 cut(s)	135, 1745
BfaI	CTAG	4 cut(s)	231, 572, 812, 1233
BfmI	CTRYAG	2 cut(s)	655, 698
BfoI	RGCGCY	1 cut(s)	83
BglI	GCCNNNNNGGC	1 cut(s)	77
BisI	GCNGC	9 cut(s)	69, 163, 226, 361, 583, 658, 1744, 1747, 1944
BlpI	GCTNAGC	1 cut(s)	464
BlsI	GCNGC	9 cut(s)	70, 164, 227, 362, 584, 659, 1745, 1748, 1945
Bme1390I	CCNGG	6 cut(s)	245, 627, 798, 936, 1467, 1848
Bme18I	GGWCC	3 cut(s)	31, 600, 1850
BmgBI	CACGTC	2 cut(s)	114, 181
BmgT120I	GGNCC	3 cut(s)	31, 600, 1850
BmiI	GGNNCC	3 cut(s)	33, 81, 1471
BmrFI	CCNGG	6 cut(s)	245, 627, 798, 936, 1467, 1848
BmsI	GCATC	5 cut(s)	213, 329, 748, 1113, 1628
BmtI	GCTAGC	1 cut(s)	234
BplI	GAGNNNNNCTC	2 cut(s)	1160, 1192
BpmI	CTGGAG	1 cut(s)	1110
Bpu1102I	GCTNAGC	1 cut(s)	464
BpuEI	CTTGAG	2 cut(s)	1219, 1546
BpuMI	CCSGG	2 cut(s)	245, 627
BsaBI	GATNNNNATC	2 cut(s)	371, 1842
BsaHI	GRCGYC	2 cut(s)	80, 144
BsaJI	CCNNGG	3 cut(s)	243, 912, 1558
BsaWI	WCCGGW	2 cut(s)	678, 1364
Bsc4I	CCNNNNNNNGG	4 cut(s)	244, 528, 561, 754
Bse3DI	GCAATG	3 cut(s)	648, 996, 1734
Bse8I	GATNNNNATC	2 cut(s)	371, 1842
BseAI	TCCGGA	1 cut(s)	1364
BseBI	CCWGG	4 cut(s)	798, 936, 1467, 1848
BseDI	CCNNGG	3 cut(s)	243, 912, 1558
BseGI	GGATG	5 cut(s)	312, 687, 763, 1273, 1619
BseJI	GATNNNNATC	2 cut(s)	371, 1842
BseLI	CCNNNNNNNGG	4 cut(s)	244, 528, 561, 754
BseMI	GCAATG	3 cut(s)	648, 996, 1734
BseMII	CTCAG	4 cut(s)	473, 541, 602, 998
BseRI	GAGGAG	3 cut(s)	430, 554, 1316
BseSI	GKGCMC	1 cut(s)	1400
BseXI	GCAGC	5 cut(s)	212, 347, 594, 669, 1758
BseYI	CCCAGC	1 cut(s)	585
BsgI	GTGCAG	1 cut(s)	1532
BshFI	GGCC	6 cut(s)	165, 248, 390, 521, 939, 1686
BshNI	GGYRCC	1 cut(s)	79
BsiHKAI	GWGCWC	6 cut(s)	14, 507, 805, 1077, 1400, 1935
BsiSI	CCGG	5 cut(s)	98, 245, 627, 679, 1365
BslFI	GGGAC	2 cut(s)	17, 1661
BslI	CCNNNNNNNGG	4 cut(s)	244, 528, 561, 754
BsmAI	GTCTC	2 cut(s)	135, 1745
BsmBI	CGTCTC	1 cut(s)	135
BsmFI	GGGAC	2 cut(s)	17, 1661
BsmI	GAATGC	2 cut(s)	322, 621
BsnI	GGCC	6 cut(s)	165, 248, 390, 521, 939, 1686
Bsp1286I	GDGCHC	6 cut(s)	14, 507, 805, 1077, 1400, 1935
Bsp13I	TCCGGA	1 cut(s)	1364
Bsp1407I	TGTACA	2 cut(s)	1212, 1677
Bsp1720I	GCTNAGC	1 cut(s)	464
Bsp19I	CCATGG	1 cut(s)	912
BspANI	GGCC	6 cut(s)	165, 248, 390, 521, 939, 1686
BspCNI	CTCAG	4 cut(s)	474, 540, 603, 999
BspEI	TCCGGA	1 cut(s)	1364
BspLI	GGNNCC	3 cut(s)	33, 81, 1471
BspMAI	CTGCAG	1 cut(s)	659
BspOI	GCTAGC	1 cut(s)	234
BspPI	GGATC	4 cut(s)	1176, 1340, 1464, 1477
BspQI	GCTCTTC	2 cut(s)	1065, 1822
BspT107I	GGYRCC	1 cut(s)	79
BsrDI	GCAATG	3 cut(s)	648, 996, 1734
BsrGI	TGTACA	2 cut(s)	1212, 1677
BssECI	CCNNGG	3 cut(s)	243, 912, 1558
BssNAI	GTATAC	1 cut(s)	1771
BssNI	GRCGYC	2 cut(s)	80, 144
BssT1I	CCWWGG	1 cut(s)	912
Bst1107I	GTATAC	1 cut(s)	1771
Bst2UI	CCWGG	4 cut(s)	798, 936, 1467, 1848
Bst4CI	ACNGT	7 cut(s)	40, 983, 1016, 1101, 1157, 1261, 1913
Bst6I	CTCTTC	6 cut(s)	402, 407, 891, 1065, 1822, 1874
BstACI	GRCGYC	2 cut(s)	80, 144
BstAPI	GCANNNNNTGC	2 cut(s)	654, 670
BstAUI	TGTACA	2 cut(s)	1212, 1677
BstC8I	GCNNGC	9 cut(s)	128, 160, 232, 250, 655, 662, 967, 1317, 1741
BstDEI	CTNAG	7 cut(s)	338, 464, 482, 527, 611, 1007, 1190
BstDSI	CCRYGG	2 cut(s)	912, 1558
BstF5I	GGATG	5 cut(s)	312, 687, 763, 1273, 1619
BstH2I	RGCGCY	1 cut(s)	83
BstHHI	GCGC	3 cut(s)	28, 82, 230
BstMAI	GTCTC	2 cut(s)	135, 1745
BstNI	CCWGG	4 cut(s)	798, 936, 1467, 1848
BstNSI	RCATGY	2 cut(s)	130, 1678
BstSCI	CCNGG	6 cut(s)	243, 625, 796, 934, 1465, 1846
BstSFI	CTRYAG	2 cut(s)	655, 698
BstSLI	GKGCMC	1 cut(s)	1400
BstV1I	GCAGC	5 cut(s)	212, 347, 594, 669, 1758
BstX2I	RGATCY	1 cut(s)	1469
BstYI	RGATCY	1 cut(s)	1469
BstZ17I	GTATAC	1 cut(s)	1771
BsuRI	GGCC	6 cut(s)	165, 248, 390, 521, 939, 1686
BtgI	CCRYGG	2 cut(s)	912, 1558
BtrI	CACGTC	2 cut(s)	114, 181
BtsCI	GGATG	5 cut(s)	312, 687, 763, 1273, 1619
BtsI	GCAGTG	2 cut(s)	1544, 1634
BtsIMutI	CAGTG	5 cut(s)	1153, 1544, 1623, 1634, 1870
Cac8I	GCNNGC	9 cut(s)	128, 160, 232, 250, 655, 662, 967, 1317, 1741
CfoI	GCGC	3 cut(s)	28, 82, 230
Cfr13I	GGNCC	3 cut(s)	31, 600, 1850
CseI	GACGC	1 cut(s)	152
Csp6I	GTAC	4 cut(s)	532, 1213, 1678, 1937
CviQI	GTAC	4 cut(s)	532, 1213, 1678, 1937
DdeI	CTNAG	7 cut(s)	338, 464, 482, 527, 611, 1007, 1190
DinI	GGCGCC	1 cut(s)	81
DrdI	GACNNNNNNGTC	1 cut(s)	1382
DseDI	GACNNNNNNGTC	1 cut(s)	1382
EaeI	YGGCCR	2 cut(s)	163, 246
Eam1104I	CTCTTC	6 cut(s)	402, 407, 891, 1065, 1822, 1874
EarI	CTCTTC	6 cut(s)	402, 407, 891, 1065, 1822, 1874
EciI	GGCGGA	1 cut(s)	55
Ecl136II	GAGCTC	3 cut(s)	12, 505, 1075
Eco130I	CCWWGG	1 cut(s)	912
Eco147I	AGGCCT	1 cut(s)	939
Eco24I	GRGCYC	3 cut(s)	14, 507, 1077
Eco32I	GATATC	1 cut(s)	1150
Eco47I	GGWCC	3 cut(s)	31, 600, 1850
Eco53kI	GAGCTC	3 cut(s)	12, 505, 1075
Eco57I	CTGAAG	1 cut(s)	773
EcoICRI	GAGCTC	3 cut(s)	12, 505, 1075
EcoRII	CCWGG	4 cut(s)	796, 934, 1465, 1846
EcoRV	GATATC	1 cut(s)	1150
EcoT14I	CCWWGG	1 cut(s)	912
EcoT22I	ATGCAT	2 cut(s)	128, 322
EcoT38I	GRGCYC	3 cut(s)	14, 507, 1077
EgeI	GGCGCC	1 cut(s)	81
EheI	GGCGCC	1 cut(s)	81
ErhI	CCWWGG	1 cut(s)	912
Esp3I	CGTCTC	1 cut(s)	135
FalI	AAGNNNNNCTT	2 cut(s)	1646, 1678
FaqI	GGGAC	2 cut(s)	17, 1661
FbaI	TGATCA	1 cut(s)	631
FblI	GTMKAC	1 cut(s)	1770
Fnu4HI	GCNGC	9 cut(s)	69, 163, 226, 361, 583, 658, 1744, 1747, 1944
FokI	GGATG	5 cut(s)	319, 694, 770, 1280, 1606
FriOI	GRGCYC	3 cut(s)	14, 507, 1077
Fsp4HI	GCNGC	9 cut(s)	69, 163, 226, 361, 583, 658, 1744, 1747, 1944
FspBI	CTAG	4 cut(s)	231, 572, 812, 1233
GlaI	GCGC	3 cut(s)	27, 81, 229
GluI	GCNGC	9 cut(s)	69, 163, 226, 361, 583, 658, 1744, 1747, 1944
GsaI	CCCAGC	1 cut(s)	589
GsuI	CTGGAG	1 cut(s)	1110
HaeII	RGCGCY	1 cut(s)	83
HaeIII	GGCC	6 cut(s)	165, 248, 390, 521, 939, 1686
HapII	CCGG	5 cut(s)	98, 245, 627, 679, 1365
HgaI	GACGC	1 cut(s)	152
HhaI	GCGC	3 cut(s)	28, 82, 230
Hin1I	GRCGYC	2 cut(s)	80, 144
Hin6I	GCGC	3 cut(s)	26, 80, 228
HinP1I	GCGC	3 cut(s)	26, 80, 228
HincII	GTYRAC	1 cut(s)	1135
HindII	GTYRAC	1 cut(s)	1135
HindIII	AAGCTT	2 cut(s)	494, 967
HinfI	GANTC	4 cut(s)	62, 299, 993, 1009
HpaI	GTTAAC	1 cut(s)	1135
HpaII	CCGG	5 cut(s)	98, 245, 627, 679, 1365
HphI	GGTGA	5 cut(s)	145, 188, 232, 641, 1028
Hpy166II	GTNNAC	5 cut(s)	721, 1135, 1215, 1398, 1771
Hpy188I	TCNGA	8 cut(s)	49, 120, 140, 306, 483, 775, 1284, 1822
Hpy188III	TCNNGA	7 cut(s)	208, 344, 500, 1064, 1179, 1365, 1786
Hpy8I	GTNNAC	5 cut(s)	721, 1135, 1215, 1398, 1771
Hpy99I	CGWCG	2 cut(s)	95, 879
HpyAV	CCTTC	7 cut(s)	157, 480, 748, 762, 917, 1359, 1429
HpyCH4III	ACNGT	7 cut(s)	40, 983, 1016, 1101, 1157, 1261, 1913
HpyCH4IV	ACGT	3 cut(s)	113, 180, 1650
HpyF3I	CTNAG	7 cut(s)	338, 464, 482, 527, 611, 1007, 1190
HpySE526I	ACGT	3 cut(s)	113, 180, 1650
Hsp92I	GRCGYC	2 cut(s)	80, 144
HspAI	GCGC	3 cut(s)	26, 80, 228
KasI	GGCGCC	1 cut(s)	79
Kpn2I	TCCGGA	1 cut(s)	1364
Ksp22I	TGATCA	1 cut(s)	631
KspAI	GTTAAC	1 cut(s)	1135
LguI	GCTCTTC	2 cut(s)	1065, 1822
LmnI	GCTCC	7 cut(s)	239, 427, 740, 750, 800, 1303, 1323
Lsp1109I	GCAGC	5 cut(s)	212, 347, 594, 669, 1758
LweI	GCATC	5 cut(s)	213, 329, 748, 1113, 1628
MaeI	CTAG	4 cut(s)	231, 572, 812, 1233
MaeII	ACGT	3 cut(s)	113, 180, 1650
MaeIII	GTNAC	4 cut(s)	787, 926, 1010, 1255
MboII	GAAGA	9 cut(s)	325, 419, 424, 908, 956, 1082, 1711, 1809, 1891
MflI	RGATCY	1 cut(s)	1469
MhlI	GDGCHC	6 cut(s)	14, 507, 805, 1077, 1400, 1935
MluCI	AATT	7 cut(s)	262, 347, 880, 1055, 1118, 1389, 1589
Mly113I	GGCGCC	1 cut(s)	80
MlyI	GAGTC	3 cut(s)	56, 1002, 1018
MmeI	TCCRAC	2 cut(s)	772, 1856
Mph1103I	ATGCAT	2 cut(s)	128, 322
MroI	TCCGGA	1 cut(s)	1364
MroXI	GAANNNNTTC	1 cut(s)	948
MseI	TTAA	4 cut(s)	843, 1134, 1422, 1926
MslI	CAYNNNNRTG	2 cut(s)	1430, 1518
MspA1I	CMGCKG	1 cut(s)	585
MspI	CCGG	5 cut(s)	98, 245, 627, 679, 1365
MspR9I	CCNGG	6 cut(s)	245, 627, 798, 936, 1467, 1848
Mva1269I	GAATGC	2 cut(s)	322, 621
MvaI	CCWGG	4 cut(s)	798, 936, 1467, 1848
NarI	GGCGCC	1 cut(s)	80
NciI	CCSGG	2 cut(s)	245, 627
NcoI	CCATGG	1 cut(s)	912
NheI	GCTAGC	1 cut(s)	230
NlaIV	GGNNCC	3 cut(s)	33, 81, 1471
NmeAIII	GCCGAG	1 cut(s)	466
NmuCI	GTSAC	1 cut(s)	1010
NsiI	ATGCAT	2 cut(s)	128, 322
NspI	RCATGY	2 cut(s)	130, 1678
PaeI	GCATGC	1 cut(s)	130
PceI	AGGCCT	1 cut(s)	939
PciSI	GCTCTTC	2 cut(s)	1065, 1822
PcsI	WCGNNNNNNNCGW	1 cut(s)	1143
PctI	GAATGC	2 cut(s)	322, 621
PdmI	GAANNNNTTC	1 cut(s)	948
PfeI	GAWTC	1 cut(s)	299
PfoI	TCCNGGA	2 cut(s)	1465, 1846
PkrI	GCNGC	9 cut(s)	70, 164, 227, 362, 584, 659, 1745, 1748, 1945
PleI	GAGTC	3 cut(s)	56, 1001, 1017
PluTI	GGCGCC	1 cut(s)	83
PpsI	GAGTC	3 cut(s)	56, 1001, 1017
Psp124BI	GAGCTC	3 cut(s)	14, 507, 1077
Psp6I	CCWGG	4 cut(s)	796, 934, 1465, 1846
PspFI	CCCAGC	1 cut(s)	585
PspGI	CCWGG	4 cut(s)	796, 934, 1465, 1846
PspN4I	GGNNCC	3 cut(s)	33, 81, 1471
PspPI	GGNCC	3 cut(s)	31, 600, 1850
PstI	CTGCAG	1 cut(s)	659
PsuI	RGATCY	1 cut(s)	1469
PvuII	CAGCTG	1 cut(s)	585
RsaI	GTAC	4 cut(s)	533, 1214, 1679, 1938
RsaNI	GTAC	4 cut(s)	532, 1213, 1678, 1937
RseI	CAYNNNNRTG	2 cut(s)	1430, 1518
SacI	GAGCTC	3 cut(s)	14, 507, 1077
SapI	GCTCTTC	2 cut(s)	1065, 1822
SaqAI	TTAA	4 cut(s)	843, 1134, 1422, 1926
SatI	GCNGC	9 cut(s)	69, 163, 226, 361, 583, 658, 1744, 1747, 1944
Sau96I	GGNCC	3 cut(s)	31, 600, 1850
SchI	GAGTC	3 cut(s)	56, 1002, 1018
ScrFI	CCNGG	6 cut(s)	245, 627, 798, 936, 1467, 1848
SduI	GDGCHC	6 cut(s)	14, 507, 805, 1077, 1400, 1935
SfaNI	GCATC	5 cut(s)	213, 329, 748, 1113, 1628
SfcI	CTRYAG	2 cut(s)	655, 698
SfoI	GGCGCC	1 cut(s)	81
SinI	GGWCC	3 cut(s)	31, 600, 1850
SmiMI	CAYNNNNRTG	2 cut(s)	1430, 1518
SmlI	CTYRAG	2 cut(s)	1198, 1525
SmoI	CTYRAG	2 cut(s)	1198, 1525
SphI	GCATGC	1 cut(s)	130
Sse9I	AATT	7 cut(s)	262, 347, 880, 1055, 1118, 1389, 1589
SseBI	AGGCCT	1 cut(s)	939
SspDI	GGCGCC	1 cut(s)	79
SspI	AATATT	1 cut(s)	1039
SspMI	CTAG	4 cut(s)	231, 572, 812, 1233
SstI	GAGCTC	3 cut(s)	14, 507, 1077
StuI	AGGCCT	1 cut(s)	939
StyD4I	CCNGG	6 cut(s)	243, 625, 796, 934, 1465, 1846
StyI	CCWWGG	1 cut(s)	912
TaaI	ACNGT	7 cut(s)	40, 983, 1016, 1101, 1157, 1261, 1913
TaiI	ACGT	3 cut(s)	116, 183, 1653
TaqI	TCGA	6 cut(s)	273, 371, 537, 985, 1428, 1787
TasI	AATT	7 cut(s)	262, 347, 880, 1055, 1118, 1389, 1589
TatI	WGTACW	2 cut(s)	1212, 1677
TauI	GCSGC	3 cut(s)	71, 165, 1746
TfiI	GAWTC	1 cut(s)	299
Tru1I	TTAA	4 cut(s)	843, 1134, 1422, 1926
Tru9I	TTAA	4 cut(s)	843, 1134, 1422, 1926
TscAI	CASTG	5 cut(s)	1160, 1551, 1630, 1641, 1870
TseFI	GTSAC	1 cut(s)	1010
TseI	GCWGC	6 cut(s)	225, 360, 582, 657, 1746, 1943
Tsp45I	GTSAC	1 cut(s)	1010
TspDTI	ATGAA	8 cut(s)	1083, 1323, 1326, 1448, 1502, 1706, 1743, 1773
TspGWI	ACGGA	3 cut(s)	74, 315, 1547
TspRI	CASTG	5 cut(s)	1160, 1551, 1630, 1641, 1870
VneI	GTGCAC	1 cut(s)	1396
VpaK11BI	GGWCC	3 cut(s)	31, 600, 1850
XapI	RAATTY	4 cut(s)	1055, 1118, 1389, 1589
XceI	RCATGY	2 cut(s)	130, 1678
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1480
XmiI	GTMKAC	1 cut(s)	1770
XmnI	GAANNNNTTC	1 cut(s)	948
XspI	CTAG	4 cut(s)	231, 572, 812, 1233
Zsp2I	ATGCAT	2 cut(s)	128, 322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.