Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0001361

Physical Location & Seq

Genomic Coordinates Forward (+)

25350217 .. 25359711

Gene Structure 9495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g24110.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGAGGAGTGCTCGACTGGGGCTCTAGTCCCGGCAGTGAAACCAGATCCAAAGGCGTCAAGCGTCATGGATTTGGCAGATCCAGGCAGCGGTCACGTTGGTCGTCTGGTGCATGAGAAAGAACTGGCAGAGGTAGACAAGGACTTGTTATGCCCAATTTGTATGCAGATGATAAAGGACGCCTTCCTCACAGCGTGTGGTCATAGCTTCTGCTACATGTGCATCATCACCCACCTCCGCAACAAGAGCGACTGCCCTTGCTGCGCCCAGTTCCTCAGTGCCAAACAATTGTTCCCTAATTTTTTGCTGGACAAGCTTCTGAAGAAGACTTCCGCACGTCAAATTTCCAAAAGTGCATCTCCTGTAGAGCATTTTCGCCAGGCATTGCAGCAGGGTTGTGAAGTGTCAATCAAGGAACTAGACACCCTGTTGGCACTCCTAGCAGAGAAGAAGCGGAAAATGGAGCAAGAAGAGGCGGAGAGAAATATGCAAATATTGCTTGACTTCTTGAATTGCCTAAGGAAGCAAAAAGTTGACGAGCTTAGTGAGGTGCAAACCCATCTCCAATTTATCAAAGAGGACATAGGTGCAGTAGAGAGATGCAGAATGGACTTGTACCGTGCCAGGGACAGATACTCTGTCAAGCTGCGGATGCTTGGAGCAGATGATTCTATTTCTGGGGCAAGAAAGCAATGGCATTCCTCTCCAGATAACAACACCGGTGCGCTTAGTGGACGAGGAGGGATGTCATCTTGGAATCTTCCGAGAAGGGATGCTTTAAGTGCATCAGACTCCCAGTTTCTAACTCAAACTGGTCTTGCCATAGCCAGAAAAAAGCGGGTCCATGCACAGTTTGATGAACTTCAAGAGTGTTACCTGCGAAAGCGGTGTCAGATGGCGAACCAACCGTACTCCCAGCAAGAACGGGACAAAAGTGTAATACAGAGAGAAGGTTATACTGCAGGTCTTGCTGATTTTCAAACAGTGCTCACTACATTAACACAGTACAGTCGAATGAGGGTCATGGCTGAACTTAGGCATGGGGATCTATTTCACTCAGCCAATATAGTATCCAGCATTGAATTTGATTGTGATTACGAGTTATTTGCTACTGCTGGAGTTTCACGGTGCATAAAAGTTTTTGACTTCTCTTCGGTTCTGAATGATCCAGTTGACATGCACTGTCCTGTTGTGGAGATGCCTACACGTTCAAAACTTAGTTGCTTGAGCTGGAACAAGTTTACTAAAAACCATATAGCCAGTACTGACTATGAAGGAATAGTAACAGTTTGGGATGTAAATACTCGGCAGAGTGTCATGGAATATGAAGAGCATGAAAAACGTGCTTGGAGTGTTGATTTTTCATGCATAGACCCCACGATGCTTGTATCTGGTAGTGATGATTGTAAGGTAAAACTTTGGTGCACAAGGCAGGAAGCTAGTGTTATTGATATTGACATGAAAGCCAACATATGTTCCGTCAAGTATAATCCGGGATCTAGCAACTTCATTGCGGTTGGTTCAGCAGACCATCACATCCACTATTATGATTTAAGAAATCCGAGCGAACCACTCCACGTGTTCACTGGGCATGGGAAAACTGTTTCTTATGTAAAATTCTTGTCAAACTATGAGCTTGCCTCTGCATCCACTGATAGCACGTTGAGGTTATGGAATGTGAGGGATAATATTCCAGTTCGTACTTTTAAAGGTCACACAAATGAGAAGAACTTTGTAGGTCTTACCGTAAACAGCGAGTACATTGCGTGTGGCAGCGAAACAAATGAAGTGTTTGTGTATCATAAGGAGATCTCTAAACCTGTGACTTGGCATAAATTTGGGTCGCCTGATTTGGATGACACAGAGGATGATGCGGGGTCGTACTTCATCAGTGCTGTATGTTGGAAGAGTGATAGCCCTACCATGCTAACTGCAAACAGTCAAGGAACCATTAAAGTGTTGGTTCTTGCGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009628 GO:0009639 GO:0009640 GO:0009641 GO:0009642 GO:0009646 GO:0009647 GO:0009648 GO:0009649 GO:0009791 GO:0009812 GO:0009987 GO:0010119 GO:0010228 GO:0016567 GO:0016604 GO:0016740 GO:0019538 GO:0019787 GO:0022414 GO:0031461 GO:0031974 GO:0031981 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0036211 GO:0042440 GO:0042752 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046283 GO:0046483 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080008 GO:0090304 GO:0140096 GO:1901360 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04115 ko04120 ko04712 map04115 map04120 map04712

Pfam Domains

Protein Families

WD40 zf-C3HC4_2

Protein Analysis

659

Amino Acids

74.14

Weight (kDa)

6.25

Isoelectric Point (pI)

44.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32950 AT2G32950
fragaria_vesca	FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_3g01260 FvH4_5g22570 FvH4_5g22570
malus_domestica	MD06G1037700.v1.1 MD10G1328500.v1.1 MD15G1405100.v1.1 MD15G1405200.v1.1 MD16G1272200.v1.1
prunus_persica	Prupe.4G013500_v2.0.a1 Prupe.5G031300_v2.0.a1 Prupe.5G031300_v2.0.a1 Prupe.5G031300_v2.0.a1 Prupe.5G031300_v2.0.a1
pyrus_communis	pycom10g27830 pycom16g24110
rosa_chinensis	RchiOBHm_Chr5g0001791 RchiOBHm_Chr7g0210341
rosa_laevigata	RLG00000003045 RLG00000030973
rosa_multiflora	Rmu_co8137394.1_g000001 Rmu_sc0003807.1_g000002 Rmu_ssc0000237.1_g000012
rosa_roxburghii	Rroxscaffold_1G00071250 Rroxscaffold_1G00074540 Rroxscaffold_3G00248380
rosa_rugosa	Rorug04G0393100 Rorug04G0393200 Rorug04G0393300 Rorug07G0121200 Rorug07G0121200 Rorug07G0121300
rosa_samantha	Rh5AG014400 Rh5BG017800 Rh5CG015500 Rh5DG015900 Rh7AG253900 Rh7BG248800 Rh7CG270700 Rh7DG261400
rosa_wichuraiana	Rw5G001390 Rw7G021640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	885, 953
AccI	GTMKAC	1 cut(s)	135
AclWI	GGATC	5 cut(s)	41, 74, 1053, 1160, 1504
AcsI	RAATTY	4 cut(s)	342, 1082, 1616, 1835
AcuI	CTGAAG	1 cut(s)	341
AcvI	CACGTG	1 cut(s)	1579
AcyI	GRCGYC	2 cut(s)	56, 180
AdeI	CACNNNGTG	1 cut(s)	195
AfaI	GTAC	7 cut(s)	617, 911, 1007, 1264, 1702, 1760, 1883
AfiI	CCNNNNNNNGG	2 cut(s)	89, 625
AflIII	ACRYGT	3 cut(s)	216, 1205, 1578
AgeI	ACCGGT	1 cut(s)	719
AgsI	TTSAA	5 cut(s)	511, 866, 980, 1082, 1212
AjiI	CACGTC	1 cut(s)	338
AjnI	CCWGG	3 cut(s)	82, 378, 623
AjuI	GAANNNNNNNTTGG	2 cut(s)	275, 307
AluBI	AGCT	7 cut(s)	207, 316, 541, 646, 1230, 1439, 1636
AluI	AGCT	7 cut(s)	207, 316, 541, 646, 1230, 1439, 1636
Alw21I	GWGCWC	3 cut(s)	14, 990, 1427
Alw44I	GTGCAC	1 cut(s)	1423
AlwI	GGATC	5 cut(s)	41, 74, 1053, 1160, 1504
ApaLI	GTGCAC	1 cut(s)	1423
ApeKI	GCWGC	5 cut(s)	87, 261, 388, 646, 1773
ApoI	RAATTY	4 cut(s)	342, 1082, 1616, 1835
ArsI	GACNNNNNNTTYG	2 cut(s)	874, 906
AsiGI	ACCGGT	1 cut(s)	719
AspLEI	GCGC	2 cut(s)	266, 727
AspS9I	GGNCC	1 cut(s)	841
AsuC2I	CCSGG	2 cut(s)	32, 1494
AsuHPI	GGTGA	1 cut(s)	220
AvaII	GGWCC	1 cut(s)	841
AxyI	CCTNAGG	1 cut(s)	518
BaeGI	GKGCMC	1 cut(s)	1427
BanII	GRGCYC	1 cut(s)	25
BbrPI	CACGTG	1 cut(s)	1579
BbsI	GAAGAC	1 cut(s)	332
Bbv12I	GWGCWC	3 cut(s)	14, 990, 1427
BbvI	GCAGC	5 cut(s)	99, 248, 400, 633, 1785
BccI	CCATC	3 cut(s)	567, 889, 1539
BcgI	CGANNNNNNTGC	4 cut(s)	1088, 1122, 1745, 1779
BciT130I	CCWGG	3 cut(s)	84, 380, 625
BciVI	GTATCC	1 cut(s)	1081
BcnI	CCSGG	2 cut(s)	32, 1494
BfaI	CTAG	5 cut(s)	26, 419, 440, 1440, 1500
BfmI	CTRYAG	2 cut(s)	363, 960
BfuAI	ACCTGC	2 cut(s)	885, 953
BfuI	GTATCC	1 cut(s)	1081
BglII	AGATCT	1 cut(s)	1809
BisI	GCNGC	6 cut(s)	88, 262, 389, 647, 1774, 1971
BlsI	GCNGC	6 cut(s)	89, 263, 390, 648, 1775, 1972
BmcAI	AGTACT	1 cut(s)	1264
Bme1390I	CCNGG	5 cut(s)	32, 84, 380, 625, 1494
Bme18I	GGWCC	1 cut(s)	841
BmgBI	CACGTC	1 cut(s)	338
BmgT120I	GGNCC	1 cut(s)	841
BmiI	GGNNCC	2 cut(s)	842, 1948
BmrFI	CCNGG	5 cut(s)	32, 84, 380, 625, 1494
BmrI	ACTGGG	4 cut(s)	27, 262, 790, 1596
BmuI	ACTGGG	4 cut(s)	27, 262, 790, 1596
BpiI	GAAGAC	1 cut(s)	332
BplI	GAGNNNNNCTC	3 cut(s)	28, 1625, 1657
BpmI	CTGGAG	2 cut(s)	690, 1137
BpuEI	CTTGAG	1 cut(s)	1246
BpuMI	CCSGG	2 cut(s)	32, 1494
BsaAI	YACGTR	1 cut(s)	1579
BsaHI	GRCGYC	2 cut(s)	56, 180
BsaJI	CCNNGG	1 cut(s)	624
BsaWI	WCCGGW	1 cut(s)	719
Bsc4I	CCNNNNNNNGG	2 cut(s)	89, 625
Bse118I	RCCGGY	1 cut(s)	719
Bse1I	ACTGG	9 cut(s)	22, 129, 268, 796, 817, 1169, 1260, 1591, 1694
Bse21I	CCTNAGG	1 cut(s)	518
Bse3DI	GCAATG	4 cut(s)	383, 698, 1509, 1761
BseBI	CCWGG	3 cut(s)	84, 380, 625
BseDI	CCNNGG	1 cut(s)	624
BseGI	GGATG	8 cut(s)	657, 750, 778, 1300, 1536, 1646, 1861, 1873
BseLI	CCNNNNNNNGG	2 cut(s)	89, 625
BseMI	GCAATG	4 cut(s)	383, 698, 1509, 1761
BseMII	CTCAG	2 cut(s)	289, 1071
BseNI	ACTGG	9 cut(s)	22, 129, 268, 796, 817, 1169, 1260, 1591, 1694
BseRI	GAGGAG	2 cut(s)	20, 753
BseSI	GKGCMC	1 cut(s)	1427
BseXI	GCAGC	5 cut(s)	99, 248, 400, 633, 1785
BseYI	CCCAGC	1 cut(s)	915
BsgI	GTGCAG	1 cut(s)	609
BshTI	ACCGGT	1 cut(s)	719
BsiHKAI	GWGCWC	3 cut(s)	14, 990, 1427
BsiSI	CCGG	3 cut(s)	32, 720, 1493
BslFI	GGGAC	3 cut(s)	14, 641, 941
BslI	CCNNNNNNNGG	2 cut(s)	89, 625
BsmFI	GGGAC	3 cut(s)	14, 641, 941
BsmI	GAATGC	1 cut(s)	697
Bsp1286I	GDGCHC	4 cut(s)	14, 25, 990, 1427
Bsp143I	GATC	6 cut(s)	46, 79, 1045, 1165, 1496, 1809
BspCNI	CTCAG	2 cut(s)	288, 1070
BspLI	GGNNCC	2 cut(s)	842, 1948
BspMAI	CTGCAG	1 cut(s)	964
BspMI	ACCTGC	2 cut(s)	885, 953
BspPI	GGATC	5 cut(s)	41, 74, 1053, 1160, 1504
BspQI	GCTCTTC	1 cut(s)	1323
BsrDI	GCAATG	4 cut(s)	383, 698, 1509, 1761
BsrFI	RCCGGY	1 cut(s)	719
BsrI	ACTGG	9 cut(s)	22, 129, 268, 796, 817, 1169, 1260, 1591, 1694
BssAI	RCCGGY	1 cut(s)	719
BssECI	CCNNGG	1 cut(s)	624
BssMI	GATC	6 cut(s)	46, 79, 1045, 1165, 1496, 1809
BssNI	GRCGYC	2 cut(s)	56, 180
Bst2UI	CCWGG	3 cut(s)	84, 380, 625
Bst6I	CTCTTC	4 cut(s)	465, 1156, 1323, 1901
BstACI	GRCGYC	2 cut(s)	56, 180
BstAPI	GCANNNNNTGC	2 cut(s)	496, 968
BstBAI	YACGTR	1 cut(s)	1579
BstC8I	GCNNGC	1 cut(s)	1638
BstDEI	CTNAG	7 cut(s)	275, 518, 542, 728, 1034, 1057, 1217
BstF5I	GGATG	8 cut(s)	657, 750, 778, 1300, 1536, 1646, 1861, 1873
BstHHI	GCGC	2 cut(s)	266, 727
BstKTI	GATC	6 cut(s)	49, 82, 1048, 1168, 1499, 1812
BstMBI	GATC	6 cut(s)	46, 79, 1045, 1165, 1496, 1809
BstMWI	GCNNNNNNNGC	9 cut(s)	219, 246, 261, 313, 440, 496, 652, 782, 968
BstNI	CCWGG	3 cut(s)	84, 380, 625
BstNSI	RCATGY	2 cut(s)	220, 1180
BstSCI	CCNGG	5 cut(s)	30, 82, 378, 623, 1492
BstSFI	CTRYAG	2 cut(s)	363, 960
BstSLI	GKGCMC	1 cut(s)	1427
BstV1I	GCAGC	5 cut(s)	99, 248, 400, 633, 1785
BstV2I	GAAGAC	1 cut(s)	332
BstX2I	RGATCY	5 cut(s)	46, 79, 1045, 1496, 1809
BstYI	RGATCY	5 cut(s)	46, 79, 1045, 1496, 1809
Bsu36I	CCTNAGG	1 cut(s)	518
BsuI	GTATCC	1 cut(s)	1081
BtrI	CACGTC	1 cut(s)	338
BtsCI	GGATG	8 cut(s)	657, 750, 778, 1300, 1536, 1646, 1861, 1873
BtsI	GCAGTG	1 cut(s)	42
BtsIMutI	CAGTG	7 cut(s)	42, 283, 990, 1180, 1584, 1650, 1897
BveI	ACCTGC	2 cut(s)	885, 953
Cac8I	GCNNGC	1 cut(s)	1638
CfoI	GCGC	2 cut(s)	266, 727
Cfr10I	RCCGGY	1 cut(s)	719
Cfr13I	GGNCC	1 cut(s)	841
CseI	GACGC	3 cut(s)	45, 52, 188
Csp6I	GTAC	7 cut(s)	616, 910, 1006, 1263, 1701, 1759, 1882
CspAI	ACCGGT	1 cut(s)	719
CspCI	CAANNNNNGTGG	2 cut(s)	1366, 1401
CviQI	GTAC	7 cut(s)	616, 910, 1006, 1263, 1701, 1759, 1882
DdeI	CTNAG	7 cut(s)	275, 518, 542, 728, 1034, 1057, 1217
DpnI	GATC	6 cut(s)	48, 81, 1047, 1167, 1498, 1811
DpnII	GATC	6 cut(s)	46, 79, 1045, 1165, 1496, 1809
DraI	TTTAAA	1 cut(s)	1708
DraIII	CACNNNGTG	1 cut(s)	195
Eam1104I	CTCTTC	4 cut(s)	465, 1156, 1323, 1901
EarI	CTCTTC	4 cut(s)	465, 1156, 1323, 1901
EciI	GGCGGA	1 cut(s)	491
Eco24I	GRGCYC	1 cut(s)	25
Eco47I	GGWCC	1 cut(s)	841
Eco57I	CTGAAG	1 cut(s)	341
Eco72I	CACGTG	1 cut(s)	1579
Eco81I	CCTNAGG	1 cut(s)	518
EcoRII	CCWGG	3 cut(s)	82, 378, 623
EcoT22I	ATGCAT	1 cut(s)	1370
EcoT38I	GRGCYC	1 cut(s)	25
FalI	AAGNNNNNCTT	4 cut(s)	167, 199, 760, 792
FaqI	GGGAC	3 cut(s)	14, 641, 941
FauI	CCCGC	2 cut(s)	831, 1867
FauNDI	CATATG	1 cut(s)	1472
FblI	GTMKAC	1 cut(s)	135
Fnu4HI	GCNGC	6 cut(s)	88, 262, 389, 647, 1774, 1971
FokI	GGATG	8 cut(s)	664, 757, 785, 1307, 1523, 1633, 1868, 1880
FriOI	GRGCYC	1 cut(s)	25
Fsp4HI	GCNGC	6 cut(s)	88, 262, 389, 647, 1774, 1971
FspBI	CTAG	5 cut(s)	26, 419, 440, 1440, 1500
GlaI	GCGC	2 cut(s)	265, 726
GluI	GCNGC	6 cut(s)	88, 262, 389, 647, 1774, 1971
GsaI	CCCAGC	1 cut(s)	919
GsuI	CTGGAG	2 cut(s)	690, 1137
HapII	CCGG	3 cut(s)	32, 720, 1493
HgaI	GACGC	3 cut(s)	45, 52, 188
HhaI	GCGC	2 cut(s)	266, 727
Hin1I	GRCGYC	2 cut(s)	56, 180
Hin6I	GCGC	2 cut(s)	264, 725
HinP1I	GCGC	2 cut(s)	264, 725
HincII	GTYRAC	2 cut(s)	535, 1174
HindII	GTYRAC	2 cut(s)	535, 1174
HindIII	AAGCTT	1 cut(s)	314
HinfI	GANTC	3 cut(s)	668, 757, 791
HpaII	CCGG	3 cut(s)	32, 720, 1493
HphI	GGTGA	1 cut(s)	220
Hpy166II	GTNNAC	8 cut(s)	136, 535, 734, 1174, 1242, 1425, 1584, 1750
Hpy188I	TCNGA	6 cut(s)	321, 765, 790, 894, 1161, 1563
Hpy188III	TCNNGA	3 cut(s)	508, 707, 866
Hpy8I	GTNNAC	8 cut(s)	136, 535, 734, 1174, 1242, 1425, 1584, 1750
HpyAV	CCTTC	4 cut(s)	193, 762, 944, 1268
HpyCH4IV	ACGT	6 cut(s)	96, 337, 1207, 1342, 1578, 1661
HpyF10VI	GCNNNNNNNGC	9 cut(s)	219, 246, 261, 313, 440, 496, 652, 782, 968
HpyF3I	CTNAG	7 cut(s)	275, 518, 542, 728, 1034, 1057, 1217
HpySE526I	ACGT	6 cut(s)	96, 337, 1207, 1342, 1578, 1661
Hsp92I	GRCGYC	2 cut(s)	56, 180
HspAI	GCGC	2 cut(s)	264, 725
Kzo9I	GATC	6 cut(s)	46, 79, 1045, 1165, 1496, 1809
LguI	GCTCTTC	1 cut(s)	1323
LmnI	GCTCC	2 cut(s)	463, 659
Lsp1109I	GCAGC	5 cut(s)	99, 248, 400, 633, 1785
MaeI	CTAG	5 cut(s)	26, 419, 440, 1440, 1500
MaeII	ACGT	6 cut(s)	96, 337, 1207, 1342, 1578, 1661
MaeIII	GTNAC	5 cut(s)	92, 872, 1282, 1712, 1822
MalI	GATC	6 cut(s)	48, 81, 1047, 1167, 1498, 1811
MboI	GATC	6 cut(s)	46, 79, 1045, 1165, 1496, 1809
MboII	GAAGA	9 cut(s)	334, 337, 460, 482, 752, 1143, 1340, 1738, 1918
MfeI	CAATTG	1 cut(s)	287
MflI	RGATCY	5 cut(s)	46, 79, 1045, 1496, 1809
MhlI	GDGCHC	4 cut(s)	14, 25, 990, 1427
MluCI	AATT	9 cut(s)	156, 287, 298, 342, 511, 566, 1082, 1616, 1835
MlyI	GAGTC	1 cut(s)	785
MmeI	TCCRAC	1 cut(s)	1883
Mph1103I	ATGCAT	1 cut(s)	1370
MseI	TTAA	5 cut(s)	779, 998, 1553, 1707, 1953
MslI	CAYNNNNRTG	3 cut(s)	1545, 1719, 1955
MspA1I	CMGCKG	1 cut(s)	90
MspI	CCGG	3 cut(s)	32, 720, 1493
MspR9I	CCNGG	5 cut(s)	32, 84, 380, 625, 1494
MunI	CAATTG	1 cut(s)	287
Mva1269I	GAATGC	1 cut(s)	697
MvaI	CCWGG	3 cut(s)	84, 380, 625
MwoI	GCNNNNNNNGC	9 cut(s)	219, 246, 261, 313, 440, 496, 652, 782, 968
NciI	CCSGG	2 cut(s)	32, 1494
NdeI	CATATG	1 cut(s)	1472
NdeII	GATC	6 cut(s)	46, 79, 1045, 1165, 1496, 1809
NlaIV	GGNNCC	2 cut(s)	842, 1948
NmeAIII	GCCGAG	1 cut(s)	1285
NmuCI	GTSAC	3 cut(s)	92, 1712, 1822
NsiI	ATGCAT	1 cut(s)	1370
NspI	RCATGY	2 cut(s)	220, 1180
PciI	ACATGT	1 cut(s)	216
PciSI	GCTCTTC	1 cut(s)	1323
PctI	GAATGC	1 cut(s)	697
PfeI	GAWTC	2 cut(s)	668, 757
PfoI	TCCNGGA	1 cut(s)	1492
PinAI	ACCGGT	1 cut(s)	719
PkrI	GCNGC	6 cut(s)	89, 263, 390, 648, 1775, 1972
PleI	GAGTC	1 cut(s)	785
PmaCI	CACGTG	1 cut(s)	1579
PmlI	CACGTG	1 cut(s)	1579
PpsI	GAGTC	1 cut(s)	785
Ppu21I	YACGTR	1 cut(s)	1579
PscI	ACATGT	1 cut(s)	216
Psp6I	CCWGG	3 cut(s)	82, 378, 623
PspCI	CACGTG	1 cut(s)	1579
PspFI	CCCAGC	1 cut(s)	915
PspGI	CCWGG	3 cut(s)	82, 378, 623
PspN4I	GGNNCC	2 cut(s)	842, 1948
PspPI	GGNCC	1 cut(s)	841
PsrI	GAACNNNNNNTAC	2 cut(s)	893, 925
PstI	CTGCAG	1 cut(s)	964
PsuI	RGATCY	5 cut(s)	46, 79, 1045, 1496, 1809
RsaI	GTAC	7 cut(s)	617, 911, 1007, 1264, 1702, 1760, 1883
RsaNI	GTAC	7 cut(s)	616, 910, 1006, 1263, 1701, 1759, 1882
RseI	CAYNNNNRTG	3 cut(s)	1545, 1719, 1955
SapI	GCTCTTC	1 cut(s)	1323
SaqAI	TTAA	5 cut(s)	779, 998, 1553, 1707, 1953
SatI	GCNGC	6 cut(s)	88, 262, 389, 647, 1774, 1971
Sau3AI	GATC	6 cut(s)	46, 79, 1045, 1165, 1496, 1809
Sau96I	GGNCC	1 cut(s)	841
ScaI	AGTACT	1 cut(s)	1264
SchI	GAGTC	1 cut(s)	785
ScrFI	CCNGG	5 cut(s)	32, 84, 380, 625, 1494
SduI	GDGCHC	4 cut(s)	14, 25, 990, 1427
SfcI	CTRYAG	2 cut(s)	363, 960
SgrAI	CRCCGGYG	1 cut(s)	719
SinI	GGWCC	1 cut(s)	841
SmiMI	CAYNNNNRTG	3 cut(s)	1545, 1719, 1955
SmlI	CTYRAG	1 cut(s)	1225
SmoI	CTYRAG	1 cut(s)	1225
Sse9I	AATT	9 cut(s)	156, 287, 298, 342, 511, 566, 1082, 1616, 1835
SspI	AATATT	2 cut(s)	495, 1690
SspMI	CTAG	5 cut(s)	26, 419, 440, 1440, 1500
StyD4I	CCNGG	5 cut(s)	30, 82, 378, 623, 1492
TaiI	ACGT	6 cut(s)	99, 340, 1210, 1345, 1581, 1664
TaqI	TCGA	2 cut(s)	14, 1012
TasI	AATT	9 cut(s)	156, 287, 298, 342, 511, 566, 1082, 1616, 1835
TatI	WGTACW	3 cut(s)	1005, 1262, 1758
TauI	GCSGC	1 cut(s)	1973
TfiI	GAWTC	2 cut(s)	668, 757
Tru1I	TTAA	5 cut(s)	779, 998, 1553, 1707, 1953
Tru9I	TTAA	5 cut(s)	779, 998, 1553, 1707, 1953
TscAI	CASTG	7 cut(s)	42, 283, 990, 1187, 1591, 1657, 1897
TseFI	GTSAC	3 cut(s)	92, 1712, 1822
TseI	GCWGC	5 cut(s)	87, 261, 388, 646, 1773
Tsp45I	GTSAC	3 cut(s)	92, 1712, 1822
TspDTI	ATGAA	9 cut(s)	873, 1287, 1341, 1350, 1353, 1475, 1498, 1800, 1876
TspGWI	ACGGA	1 cut(s)	1468
TspRI	CASTG	7 cut(s)	42, 283, 990, 1187, 1591, 1657, 1897
VneI	GTGCAC	1 cut(s)	1423
VpaK11BI	GGWCC	1 cut(s)	841
XapI	RAATTY	4 cut(s)	342, 1082, 1616, 1835
XceI	RCATGY	2 cut(s)	220, 1180
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1583, 1957
XmiI	GTMKAC	1 cut(s)	135
XspI	CTAG	5 cut(s)	26, 419, 440, 1440, 1500
ZrmI	AGTACT	1 cut(s)	1264
Zsp2I	ATGCAT	1 cut(s)	1370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.