Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002971

Physical Location & Seq

Genomic Coordinates Reverse (-)

212518 .. 216736

Gene Structure 4219 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G01540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGGCTGCTACCGCTGCTGCTTCTGTTGTCCGTTACGCACCTGAGGATCATACTCTTCCCAAGCCCTGGAAAGGCCTTATCGATGATAGAACTGGTTACTTGTACTTTTGGAATCCTGAGACCAATGTTACTCAGTACGAGAAACCAACCCCCTCTCTACCTCCTAAGTTTTCTCCCGCCGTTTCTGTTAGCTCTTCCGTTCAGGTTCAACAAACTGATGCCTATGCTCCTCCCAAGGATGACGATAAGTACTCCAGAGGCTCTGAACGTGTGTCCAGGTTTTCTGAGGGTGGCAGGAGTGGACCGCCTTATTCGAACGGTGCTGCTAATGGAGTTGGGGATTCTGCTTATGGTGCAGCATCTACCAGAGTTCCTCTTCCTTCATCAGCTCCAGCAAGTGAACTATCCCCTGAGGCCTATTCCCGCCGTCATGAAATTACTGTCAGTGGGGGCCAAGTACCACCACCTCTAATGTCCTTTGAAGCTACTGGTTTTCCACCTGAGCTTCTGCGGGAGGTACTCAGTGCAGGTTTCTCTGCTCCAACTCCAATTCAAGCTCAGTCATGGCCCATTGCTATGCAAGGTAGGGACATAGTAGCCATTGCTAAAACTGGCTCGGGAAAAACTTTGGGTTACTTGATTCCTGGATTTTTGCATCTTCAACGTATCCGAAATGATTCGCGAATGGGCCCAACAATCTTGGTATTGTCTCCAACGAGAGAGCTGGCCACACAAATCCAAGAAGAAGCTGTTAAATTTGGGAGGTCATCAAGAATTTCGTGTACGTGTTTGTATGGTGGTGCACCAAAGGGCCCTCAGTTGAGGGATTTAGAAAGAGGAGCAGATATCGTGGTTGCAACTCCTGGGAGATTGAATGATATCCTTGAAATGAGGAGGATTAGTCTGCGTCAGATATCTTATCTTGTGCTAGATGAGGCAGATAGAATGTTGGACATGGGTTTTGAACCTCAGATAAGGAAGATTGTGAAAGAAATTCCCACTAAGCGTCAAACCCTTATGTACACAGCTACATGGCCAAAGGGAGTTAGGAAAATTGCAGCTGACTTGCTTGTTAACCCTGCTCAAGTCAACATTGGCAATGTTGACGAGCTTGTGGCTAACAAGTCAATCACACAGCATATTGAAGTGGTAGCACCAATGGAGAAACAGAGGAGGTTAGAGCAGATCTTGCGGTCTCAGGAACCAGGCTCAAAGGTGATAATATTCTGCTCAACCAAAAGGATGTGTGATCAACTAACACGCAATCTAACCCGCCAATTTGGAGCTGCTGCTATACATGGAGACAAGTCCCAGCCTGAGAGAGACAATGTTCTTAATCAATTCCGCAGTGGCAGAACTCCGGTTCTTGTAGCAACCGATGTTGCTGCTCGTGGTCTGGACGTTAAGGACATCAGGGCGGTCGTAAACTATGATTTCCCCAATGGAGTGGAAGACTATGTTCATAGAATCGGAAGAACAGGAAGAGCTGGAGCGACTGGTCAGGCATTCACATTCTTTGGTGATCAAGATTCGAAACATGCTTCGGATCTGATCAAGATTTTGGAAGGAGCAAACCAGCGAGTTCCTCCTCAGATCCGCGAAATGGCTACACGTGGTGGTGGGGGAATGAACAAATTCAGTCGTTGGGGACCTCCTTCCGGCGGCCGTGGTCGTGGTGGCGACTCTGGTTATGGTGGCAGAGGTAGCTTTGCTTCCCGTGACAGAAGCAGCAATGGATGGGGAAGAGAGCGAGAAAGGAGCCGTAGCCCTGAGAGATTCAACAGAGCTCCACCACCGTCTTCCACCGGATCTCCTCCTCGCAGCTTCCACGAGACGATGATGATGAAACACAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009628 GO:0009651 GO:0009987 GO:0010501 GO:0016070 GO:0016301 GO:0016310 GO:0016462 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031974 GO:0031981 GO:0034641 GO:0036211 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046777 GO:0050896 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140096 GO:0140098 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C WW

Protein Analysis

618

Amino Acids

67.64

Weight (kDa)

9.77

Isoelectric Point (pI)

52.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	19 - 49	1.4e-07	WW domain
DEAD	PF00270	182 - 351	6e-49	DEAD/DEAH box helicase
ResIII	PF04851	194 - 345	6.1e-07	Type III restriction enzyme, res subunit
Helicase_C	PF00271	389 - 497	1.5e-34	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002971)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01540 AT3G01540 AT3G01540 AT3G01540 AT5G14610 AT5G14610 AT5G14610 AT5G14610 AT5G14610 AT5G14610 AT5G14610
fragaria_vesca	FvH4_3g33550 FvH4_6g50990
malus_domestica	MD09G1029800.v1.1 MD17G1031800.v1.1
prunus_persica	Prupe.3G287500_v2.0.a1 Prupe.3G287500_v2.0.a1
pyrus_communis	pycom17g02940
rosa_chinensis	RchiOBHm_Chr2g0172491 RchiOBHm_Chr3g0496011
rosa_laevigata	RLG00000022110 RLG00000026510
rosa_multiflora	Rmu_co8447803.1_g000001 Rmu_sc0008577.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079810 Rroxscaffold_6G00401610
rosa_rugosa	Rorug02G0559500
rosa_samantha	Rh1CG060200 Rh2AG635200 Rh2BG648700 Rh2CG615300 Rh2DG663200 Rh3AG325700 Rh5DG348900 Rh5DG552200 Rh7AG279200 Rh7CG298300
rosa_wichuraiana	Rw2G052550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	518
AccB7I	CCANNNNNTGG	1 cut(s)	66
AccII	CGCG	2 cut(s)	682, 1599
AclWI	GGATC	4 cut(s)	54, 1554, 1588, 1816
AcoI	YGGCCR	3 cut(s)	726, 1034, 1663
AcsI	RAATTY	4 cut(s)	755, 774, 993, 1634
AcvI	CACGTG	1 cut(s)	1613
AdeI	CACNNNGTG	1 cut(s)	1616
AfaI	GTAC	7 cut(s)	104, 137, 251, 459, 519, 784, 1022
AfiI	CCNNNNNNNGG	5 cut(s)	66, 71, 1603, 1658, 1661
AflIII	ACRYGT	3 cut(s)	268, 785, 1610
AgsI	TTSAA	9 cut(s)	209, 482, 554, 662, 874, 887, 965, 1145, 1780
AjnI	CCWGG	5 cut(s)	65, 275, 643, 862, 1204
Alw21I	GWGCWC	2 cut(s)	805, 1789
Alw26I	GTCTC	6 cut(s)	113, 714, 1200, 1296, 1317, 1826
Alw44I	GTGCAC	1 cut(s)	801
AlwI	GGATC	4 cut(s)	54, 1554, 1588, 1816
Ama87I	CYCGRG	1 cut(s)	616
AoxI	GGCC	9 cut(s)	73, 414, 451, 566, 688, 726, 811, 1034, 1663
ApaI	GGGCCC	2 cut(s)	692, 815
ApaLI	GTGCAC	1 cut(s)	801
ApoI	RAATTY	4 cut(s)	755, 774, 993, 1634
ArsI	GACNNNNNNTTYG	2 cut(s)	944, 976
Asp700I	GAANNNNTTC	2 cut(s)	676, 1634
AspS9I	GGNCC	8 cut(s)	302, 451, 567, 688, 689, 811, 812, 1649
AsuHPI	GGTGA	2 cut(s)	1228, 1532
AsuII	TTCGAA	2 cut(s)	314, 1532
AvaI	CYCGRG	1 cut(s)	616
AvaII	GGWCC	2 cut(s)	302, 1649
AxyI	CCTNAGG	2 cut(s)	42, 411
BaeGI	GKGCMC	3 cut(s)	692, 805, 815
BalI	TGGCCA	2 cut(s)	728, 1036
BanII	GRGCYC	3 cut(s)	692, 815, 1789
BarI	GAAGNNNNNNTAC	2 cut(s)	1696, 1728
BauI	CACGAG	2 cut(s)	1389, 1829
BbrPI	CACGTG	1 cut(s)	1613
BbsI	GAAGAC	2 cut(s)	1458, 1791
Bbv12I	GWGCWC	2 cut(s)	805, 1789
BbvI	GCAGC	9 cut(s)	4, 310, 368, 1070, 1273, 1276, 1372, 1740, 1833
BccI	CCATC	1 cut(s)	1731
BceAI	ACGGC	4 cut(s)	164, 411, 1650, 1746
BcgI	CGANNNNNNTGC	2 cut(s)	1367, 1401
BciT130I	CCWGG	5 cut(s)	67, 277, 645, 864, 1206
BciVI	GTATCC	1 cut(s)	677
BclI	TGATCA	3 cut(s)	1249, 1522, 1551
BcoDI	GTCTC	6 cut(s)	113, 714, 1200, 1296, 1317, 1826
BfaI	CTAG	1 cut(s)	929
BfuAI	ACCTGC	1 cut(s)	518
BfuI	GTATCC	1 cut(s)	677
BglII	AGATCT	1 cut(s)	1185
BmcAI	AGTACT	1 cut(s)	251
Bme1390I	CCNGG	5 cut(s)	67, 277, 645, 864, 1206
Bme18I	GGWCC	2 cut(s)	302, 1649
BmeT110I	CYCGRG	1 cut(s)	616
BmgT120I	GGNCC	8 cut(s)	302, 451, 567, 688, 689, 811, 812, 1649
BmiI	GGNNCC	6 cut(s)	452, 690, 813, 1203, 1650, 1760
BmrFI	CCNGG	5 cut(s)	67, 277, 645, 864, 1206
BmsI	GCATC	3 cut(s)	208, 368, 664
BpiI	GAAGAC	2 cut(s)	1458, 1791
BpmI	CTGGAG	3 cut(s)	238, 375, 1509
Bpu10I	CCTNAGC	1 cut(s)	501
Bpu14I	TTCGAA	2 cut(s)	314, 1532
BpuEI	CTTGAG	1 cut(s)	1068
Bsa29I	ATCGAT	1 cut(s)	81
BsaAI	YACGTR	2 cut(s)	786, 1613
BsaI	GGTCTC	2 cut(s)	113, 1200
BsaJI	CCNNGG	4 cut(s)	65, 234, 863, 1666
BsaWI	WCCGGW	2 cut(s)	1360, 1805
BsaXI	ACNNNNNCTCC	4 cut(s)	886, 916, 1795, 1825
Bsc4I	CCNNNNNNNGG	5 cut(s)	66, 71, 1603, 1658, 1661
Bse1I	ACTGG	4 cut(s)	97, 493, 616, 1501
Bse21I	CCTNAGG	2 cut(s)	42, 411
Bse3DI	GCAATG	4 cut(s)	570, 600, 1105, 1738
BseBI	CCWGG	5 cut(s)	67, 277, 645, 864, 1206
BseCI	ATCGAT	1 cut(s)	81
BseDI	CCNNGG	4 cut(s)	65, 234, 863, 1666
BseGI	GGATG	3 cut(s)	244, 1248, 1742
BseLI	CCNNNNNNNGG	5 cut(s)	66, 71, 1603, 1658, 1661
BseMI	GCAATG	4 cut(s)	570, 600, 1105, 1738
BseNI	ACTGG	4 cut(s)	97, 493, 616, 1501
BseRI	GAGGAG	7 cut(s)	219, 852, 907, 1186, 1578, 1803, 1806
BseSI	GKGCMC	3 cut(s)	692, 805, 815
BseX3I	CGGCCG	1 cut(s)	1663
BseXI	GCAGC	9 cut(s)	4, 310, 368, 1070, 1273, 1276, 1372, 1740, 1833
BseYI	CCCAGC	1 cut(s)	1311
BsgI	GTGCAG	2 cut(s)	375, 546
Bsh1236I	CGCG	2 cut(s)	682, 1599
Bsh1285I	CGRYCG	2 cut(s)	1422, 1666
BshFI	GGCC	9 cut(s)	75, 416, 453, 568, 690, 728, 813, 1036, 1665
BshVI	ATCGAT	1 cut(s)	81
BsiEI	CGRYCG	2 cut(s)	1422, 1666
BsiHKAI	GWGCWC	2 cut(s)	805, 1789
BsiHKCI	CYCGRG	1 cut(s)	616
BsiSI	CCGG	3 cut(s)	1361, 1659, 1806
BslFI	GGGAC	3 cut(s)	602, 1294, 1662
BslI	CCNNNNNNNGG	5 cut(s)	66, 71, 1603, 1658, 1661
BsmAI	GTCTC	6 cut(s)	113, 714, 1200, 1296, 1317, 1826
BsmBI	CGTCTC	1 cut(s)	1826
BsmFI	GGGAC	3 cut(s)	602, 1294, 1662
BsmI	GAATGC	1 cut(s)	1505
BsnI	GGCC	9 cut(s)	75, 416, 453, 568, 690, 728, 813, 1036, 1665
Bso31I	GGTCTC	2 cut(s)	113, 1200
BsoBI	CYCGRG	1 cut(s)	616
Bsp119I	TTCGAA	2 cut(s)	314, 1532
Bsp120I	GGGCCC	2 cut(s)	688, 811
Bsp1286I	GDGCHC	4 cut(s)	692, 805, 815, 1789
Bsp1407I	TGTACA	1 cut(s)	1020
Bsp143I	GATC	8 cut(s)	46, 1185, 1249, 1522, 1546, 1551, 1593, 1808
Bsp68I	TCGCGA	1 cut(s)	682
BspANI	GGCC	9 cut(s)	75, 416, 453, 568, 690, 728, 813, 1036, 1665
BspDI	ATCGAT	1 cut(s)	81
BspFNI	CGCG	2 cut(s)	682, 1599
BspHI	TCATGA	1 cut(s)	430
BspLI	GGNNCC	6 cut(s)	452, 690, 813, 1203, 1650, 1760
BspMI	ACCTGC	1 cut(s)	518
BspPI	GGATC	4 cut(s)	54, 1554, 1588, 1816
BspQI	GCTCTTC	2 cut(s)	199, 1477
BspT104I	TTCGAA	2 cut(s)	314, 1532
BspTNI	GGTCTC	2 cut(s)	113, 1200
BsrDI	GCAATG	4 cut(s)	570, 600, 1105, 1738
BsrGI	TGTACA	1 cut(s)	1020
BsrI	ACTGG	4 cut(s)	97, 493, 616, 1501
BssECI	CCNNGG	4 cut(s)	65, 234, 863, 1666
BssMI	GATC	8 cut(s)	46, 1185, 1249, 1522, 1546, 1551, 1593, 1808
BssSI	CACGAG	2 cut(s)	1389, 1829
BssT1I	CCWWGG	1 cut(s)	234
Bst2BI	CACGAG	2 cut(s)	1389, 1829
Bst2UI	CCWGG	5 cut(s)	67, 277, 645, 864, 1206
Bst4CI	ACNGT	3 cut(s)	320, 442, 1797
Bst6I	CTCTTC	5 cut(s)	60, 199, 381, 1477, 1738
BstAPI	GCANNNNNTGC	1 cut(s)	1189
BstAUI	TGTACA	1 cut(s)	1020
BstBAI	YACGTR	2 cut(s)	786, 1613
BstBI	TTCGAA	2 cut(s)	314, 1532
BstC8I	GCNNGC	1 cut(s)	726
BstDSI	CCRYGG	1 cut(s)	1666
BstF5I	GGATG	3 cut(s)	244, 1248, 1742
BstFNI	CGCG	2 cut(s)	682, 1599
BstKTI	GATC	8 cut(s)	49, 1188, 1252, 1525, 1549, 1554, 1596, 1811
BstMAI	GTCTC	6 cut(s)	113, 714, 1200, 1296, 1317, 1826
BstMBI	GATC	8 cut(s)	46, 1185, 1249, 1522, 1546, 1551, 1593, 1808
BstMCI	CGRYCG	2 cut(s)	1422, 1666
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 14, 353, 1189, 1704
BstNI	CCWGG	5 cut(s)	67, 277, 645, 864, 1206
BstNSI	RCATGY	1 cut(s)	1541
BstSCI	CCNGG	5 cut(s)	65, 275, 643, 862, 1204
BstSLI	GKGCMC	3 cut(s)	692, 805, 815
BstUI	CGCG	2 cut(s)	682, 1599
BstV1I	GCAGC	9 cut(s)	4, 310, 368, 1070, 1273, 1276, 1372, 1740, 1833
BstV2I	GAAGAC	2 cut(s)	1458, 1791
BstX2I	RGATCY	4 cut(s)	1185, 1546, 1593, 1808
BstXI	CCANNNNNNTGG	1 cut(s)	1447
BstYI	RGATCY	4 cut(s)	1185, 1546, 1593, 1808
BstZI	CGGCCG	1 cut(s)	1663
Bsu15I	ATCGAT	1 cut(s)	81
Bsu36I	CCTNAGG	2 cut(s)	42, 411
BsuI	GTATCC	1 cut(s)	677
BsuRI	GGCC	9 cut(s)	75, 416, 453, 568, 690, 728, 813, 1036, 1665
BsuTUI	ATCGAT	1 cut(s)	81
BtgI	CCRYGG	1 cut(s)	1666
BtsCI	GGATG	3 cut(s)	244, 1248, 1742
BtsI	GCAGTG	1 cut(s)	1354
BtsIMutI	CAGTG	3 cut(s)	451, 529, 1354
BtuMI	TCGCGA	1 cut(s)	682
BveI	ACCTGC	1 cut(s)	518
Cac8I	GCNNGC	1 cut(s)	726
CciI	TCATGA	1 cut(s)	430
Cfr13I	GGNCC	8 cut(s)	302, 451, 567, 688, 689, 811, 812, 1649
ClaI	ATCGAT	1 cut(s)	81
CseI	GACGC	2 cut(s)	896, 995
Csp6I	GTAC	7 cut(s)	103, 136, 250, 458, 518, 783, 1021
CviAII	CATG	6 cut(s)	431, 564, 955, 1032, 1298, 1538
CviQI	GTAC	7 cut(s)	103, 136, 250, 458, 518, 783, 1021
DpnI	GATC	8 cut(s)	48, 1187, 1251, 1524, 1548, 1553, 1595, 1810
DpnII	GATC	8 cut(s)	46, 1185, 1249, 1522, 1546, 1551, 1593, 1808
DraIII	CACNNNGTG	1 cut(s)	1616
EaeI	YGGCCR	3 cut(s)	726, 1034, 1663
EagI	CGGCCG	1 cut(s)	1663
Eam1104I	CTCTTC	5 cut(s)	60, 199, 381, 1477, 1738
EarI	CTCTTC	5 cut(s)	60, 199, 381, 1477, 1738
Ecl136II	GAGCTC	1 cut(s)	1787
EclXI	CGGCCG	1 cut(s)	1663
Eco130I	CCWWGG	1 cut(s)	234
Eco147I	AGGCCT	2 cut(s)	75, 416
Eco24I	GRGCYC	3 cut(s)	692, 815, 1789
Eco31I	GGTCTC	2 cut(s)	113, 1200
Eco32I	GATATC	3 cut(s)	847, 880, 915
Eco47I	GGWCC	2 cut(s)	302, 1649
Eco52I	CGGCCG	1 cut(s)	1663
Eco53kI	GAGCTC	1 cut(s)	1787
Eco72I	CACGTG	1 cut(s)	1613
Eco81I	CCTNAGG	2 cut(s)	42, 411
Eco88I	CYCGRG	1 cut(s)	616
EcoICRI	GAGCTC	1 cut(s)	1787
EcoO109I	RGGNCCY	3 cut(s)	811, 812, 1649
EcoRII	CCWGG	5 cut(s)	65, 275, 643, 862, 1204
EcoRV	GATATC	3 cut(s)	847, 880, 915
EcoT14I	CCWWGG	1 cut(s)	234
EcoT38I	GRGCYC	3 cut(s)	692, 815, 1789
ErhI	CCWWGG	1 cut(s)	234
Esp3I	CGTCTC	1 cut(s)	1826
FaeI	CATG	6 cut(s)	434, 567, 958, 1035, 1301, 1541
FaqI	GGGAC	3 cut(s)	602, 1294, 1662
FatI	CATG	6 cut(s)	430, 563, 954, 1031, 1297, 1537
FauI	CCCGC	4 cut(s)	184, 431, 504, 1280
FbaI	TGATCA	3 cut(s)	1249, 1522, 1551
FokI	GGATG	3 cut(s)	251, 1255, 1749
FriOI	GRGCYC	3 cut(s)	692, 815, 1789
FspBI	CTAG	1 cut(s)	929
GsaI	CCCAGC	1 cut(s)	1315
GsuI	CTGGAG	3 cut(s)	238, 375, 1509
HaeIII	GGCC	9 cut(s)	75, 416, 453, 568, 690, 728, 813, 1036, 1665
HapII	CCGG	3 cut(s)	1361, 1659, 1806
HgaI	GACGC	2 cut(s)	896, 995
Hin1II	CATG	6 cut(s)	434, 567, 958, 1035, 1301, 1541
HincII	GTYRAC	3 cut(s)	1075, 1090, 1105
HindII	GTYRAC	3 cut(s)	1075, 1090, 1105
HinfI	GANTC	8 cut(s)	112, 341, 640, 677, 1467, 1529, 1682, 1776
HpaI	GTTAAC	1 cut(s)	1075
HpaII	CCGG	3 cut(s)	1361, 1659, 1806
HphI	GGTGA	2 cut(s)	1228, 1532
Hpy166II	GTNNAC	9 cut(s)	302, 401, 783, 803, 1023, 1075, 1090, 1105, 1426
Hpy188I	TCNGA	9 cut(s)	265, 286, 671, 912, 972, 1472, 1546, 1551, 1593
Hpy8I	GTNNAC	9 cut(s)	302, 401, 783, 803, 1023, 1075, 1090, 1105, 1426
HpyAV	CCTTC	3 cut(s)	390, 1559, 1665
HpyCH4III	ACNGT	3 cut(s)	320, 442, 1797
HpyCH4IV	ACGT	5 cut(s)	268, 664, 785, 1401, 1612
HpyCH4V	TGCA	7 cut(s)	356, 527, 580, 655, 803, 857, 1058
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 14, 353, 1189, 1704
HpySE526I	ACGT	5 cut(s)	268, 664, 785, 1401, 1612
Hsp92II	CATG	6 cut(s)	434, 567, 958, 1035, 1301, 1541
Ksp22I	TGATCA	3 cut(s)	1249, 1522, 1551
KspAI	GTTAAC	1 cut(s)	1075
Kzo9I	GATC	8 cut(s)	46, 1185, 1249, 1522, 1546, 1551, 1593, 1808
LguI	GCTCTTC	2 cut(s)	199, 1477
LmnI	GCTCC	9 cut(s)	232, 394, 544, 839, 1283, 1490, 1568, 1758, 1792
Lsp1109I	GCAGC	9 cut(s)	4, 310, 368, 1070, 1273, 1276, 1372, 1740, 1833
LweI	GCATC	3 cut(s)	208, 368, 664
MaeI	CTAG	1 cut(s)	929
MaeII	ACGT	5 cut(s)	268, 664, 785, 1401, 1612
MaeIII	GTNAC	5 cut(s)	32, 95, 127, 632, 1718
MalI	GATC	8 cut(s)	48, 1187, 1251, 1524, 1548, 1553, 1595, 1810
MboI	GATC	8 cut(s)	46, 1185, 1249, 1522, 1546, 1551, 1593, 1808
MflI	RGATCY	4 cut(s)	1185, 1546, 1593, 1808
MhlI	GDGCHC	4 cut(s)	692, 805, 815, 1789
MlsI	TGGCCA	2 cut(s)	728, 1036
MluCI	AATT	9 cut(s)	435, 549, 755, 774, 993, 1053, 1277, 1340, 1634
MluNI	TGGCCA	2 cut(s)	728, 1036
MlyI	GAGTC	1 cut(s)	1676
MmeI	TCCRAC	3 cut(s)	566, 737, 930
Mox20I	TGGCCA	2 cut(s)	728, 1036
MroXI	GAANNNNTTC	2 cut(s)	676, 1634
MscI	TGGCCA	2 cut(s)	728, 1036
MseI	TTAA	4 cut(s)	753, 1074, 1335, 1404
MslI	CAYNNNNRTG	1 cut(s)	575
Msp20I	TGGCCA	2 cut(s)	728, 1036
MspA1I	CMGCKG	2 cut(s)	14, 1061
MspI	CCGG	3 cut(s)	1361, 1659, 1806
MspR9I	CCNGG	5 cut(s)	67, 277, 645, 864, 1206
Mva1269I	GAATGC	1 cut(s)	1505
MvaI	CCWGG	5 cut(s)	67, 277, 645, 864, 1206
MvnI	CGCG	2 cut(s)	682, 1599
MwoI	GCNNNNNNNGC	5 cut(s)	11, 14, 353, 1189, 1704
NdeII	GATC	8 cut(s)	46, 1185, 1249, 1522, 1546, 1551, 1593, 1808
NlaIII	CATG	6 cut(s)	434, 567, 958, 1035, 1301, 1541
NlaIV	GGNNCC	6 cut(s)	452, 690, 813, 1203, 1650, 1760
NmuCI	GTSAC	1 cut(s)	1718
NruI	TCGCGA	1 cut(s)	682
NspI	RCATGY	1 cut(s)	1541
NspV	TTCGAA	2 cut(s)	314, 1532
PagI	TCATGA	1 cut(s)	430
PceI	AGGCCT	2 cut(s)	75, 416
PciSI	GCTCTTC	2 cut(s)	199, 1477
PctI	GAATGC	1 cut(s)	1505
PdmI	GAANNNNTTC	2 cut(s)	676, 1634
PfeI	GAWTC	7 cut(s)	112, 341, 640, 677, 1467, 1529, 1776
PflMI	CCANNNNNTGG	1 cut(s)	66
PfoI	TCCNGGA	1 cut(s)	643
PleI	GAGTC	1 cut(s)	1676
PmaCI	CACGTG	1 cut(s)	1613
PmlI	CACGTG	1 cut(s)	1613
PpsI	GAGTC	1 cut(s)	1676
Ppu21I	YACGTR	2 cut(s)	786, 1613
PpuMI	RGGWCCY	1 cut(s)	1649
Psp124BI	GAGCTC	1 cut(s)	1789
Psp5II	RGGWCCY	1 cut(s)	1649
Psp6I	CCWGG	5 cut(s)	65, 275, 643, 862, 1204
PspCI	CACGTG	1 cut(s)	1613
PspFI	CCCAGC	1 cut(s)	1311
PspGI	CCWGG	5 cut(s)	65, 275, 643, 862, 1204
PspN4I	GGNNCC	6 cut(s)	452, 690, 813, 1203, 1650, 1760
PspOMI	GGGCCC	2 cut(s)	688, 811
PspPI	GGNCC	8 cut(s)	302, 451, 567, 688, 689, 811, 812, 1649
PspPPI	RGGWCCY	1 cut(s)	1649
PsuI	RGATCY	4 cut(s)	1185, 1546, 1593, 1808
PvuII	CAGCTG	1 cut(s)	1061
RruI	TCGCGA	1 cut(s)	682
RsaI	GTAC	7 cut(s)	104, 137, 251, 459, 519, 784, 1022
RsaNI	GTAC	7 cut(s)	103, 136, 250, 458, 518, 783, 1021
RseI	CAYNNNNRTG	1 cut(s)	575
SacI	GAGCTC	1 cut(s)	1789
SapI	GCTCTTC	2 cut(s)	199, 1477
SaqAI	TTAA	4 cut(s)	753, 1074, 1335, 1404
Sau3AI	GATC	8 cut(s)	46, 1185, 1249, 1522, 1546, 1551, 1593, 1808
Sau96I	GGNCC	8 cut(s)	302, 451, 567, 688, 689, 811, 812, 1649
ScaI	AGTACT	1 cut(s)	251
SchI	GAGTC	1 cut(s)	1676
ScrFI	CCNGG	5 cut(s)	67, 277, 645, 864, 1206
SduI	GDGCHC	4 cut(s)	692, 805, 815, 1789
SfaNI	GCATC	3 cut(s)	208, 368, 664
SfuI	TTCGAA	2 cut(s)	314, 1532
SinI	GGWCC	2 cut(s)	302, 1649
SmiMI	CAYNNNNRTG	1 cut(s)	575
SmlI	CTYRAG	1 cut(s)	1083
SmoI	CTYRAG	1 cut(s)	1083
Sse9I	AATT	9 cut(s)	435, 549, 755, 774, 993, 1053, 1277, 1340, 1634
SseBI	AGGCCT	2 cut(s)	75, 416
SspI	AATATT	1 cut(s)	1224
SspMI	CTAG	1 cut(s)	929
SstI	GAGCTC	1 cut(s)	1789
StuI	AGGCCT	2 cut(s)	75, 416
StyD4I	CCNGG	5 cut(s)	65, 275, 643, 862, 1204
StyI	CCWWGG	1 cut(s)	234
TaaI	ACNGT	3 cut(s)	320, 442, 1797
TaiI	ACGT	5 cut(s)	271, 667, 788, 1404, 1615
TaqI	TCGA	3 cut(s)	81, 314, 1532
TasI	AATT	9 cut(s)	435, 549, 755, 774, 993, 1053, 1277, 1340, 1634
TatI	WGTACW	3 cut(s)	102, 249, 1020
TauI	GCSGC	1 cut(s)	1665
TfiI	GAWTC	7 cut(s)	112, 341, 640, 677, 1467, 1529, 1776
Tru1I	TTAA	4 cut(s)	753, 1074, 1335, 1404
Tru9I	TTAA	4 cut(s)	753, 1074, 1335, 1404
TscAI	CASTG	3 cut(s)	451, 529, 1354
TseFI	GTSAC	1 cut(s)	1718
Tsp45I	GTSAC	1 cut(s)	1718
TspDTI	ATGAA	4 cut(s)	372, 447, 1451, 1643
TspGWI	ACGGA	2 cut(s)	20, 187
TspRI	CASTG	3 cut(s)	451, 529, 1354
Van91I	CCANNNNNTGG	1 cut(s)	66
VneI	GTGCAC	1 cut(s)	801
VpaK11BI	GGWCC	2 cut(s)	302, 1649
XapI	RAATTY	4 cut(s)	755, 774, 993, 1634
XceI	RCATGY	1 cut(s)	1541
XmnI	GAANNNNTTC	2 cut(s)	676, 1634
XspI	CTAG	1 cut(s)	929
ZrmI	AGTACT	1 cut(s)	251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.