Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0002971

Physical Location & Seq

Genomic Coordinates Forward (+)

25935102 .. 25940318

Gene Structure 5217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G287500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGCTGCCACTGCAACTGCCTCTAGTGGTCCTCGATATGCTCCGGAGGACCCCACTCTTCCCAAACCATGGAGAGGATTGGTTGATGGTAAAACTGGGTATCTTTACTTTTGGAACCCCGAGACTAATGTTACCCAATATGACAGGCCTACGGGCTCAGCTCCTCCGTTAAAGCCGTCTTCGGCACAATCTATAAGTTCTTCAGTTCATGTTCAACAATCTTCACAAGGACGTCGTCCGGATGAGGGAGATGATAGGTATGGCAGAGGCAGCAATGGTGGGTCAAAATTTGACGCTGGACCAAGAAATCAGCAGAGTGCAAGAAGTGCAACAGTTTCTTCTCATAATATCCCGAATGGGACACTTAGTGCACTTGGAGGATCTTCTCTGAGAGGAAATGGATCATCAGACACTGGAATTGGTTTGTCTGCTGAGGCTTATAGTCGTCGACACGAAATATCTGTTATTGGTGATAATGTGCCTCCACCCTTCACTTCATTTGAAGCTACTGGCTTCCCATCCGAGATTCTTAGAGAGGTACAAAATGCAGGTTTTTCTTCCCCAACTCCAATTCAGGCACAGTCTTGGCCGGTTGCTCTTCAAAGTAGAGATATAGTAGCCATTGCTAAAACAGGTTCAGGGAAGACCTTGGGGTATTTACTTCCTGGATTCATCCATCTCAAGCGCAGCCGTAATGACCCTCAGTTGGGTCCCACTGTGTTGGTGCTATCACCAACAAGGGAGCTGGCAACACAGATTCAAGATGAGGCAGTGAAGTTTGGGAAGTCCTCAAGGATATCTTGTGTGTGTTTGTATGGAGGAGCTCCAAAGGGTCCACAGTTGAGAGATATTGACCGAGGAGCCGATGTTGTGGTTGCCACTCCTGGCCGCTTGAATGATATTCTTGAAATGAAGAGAATCAGCCTCCATCAAGTTTCGTACTTAGTGTTGGATGAGGCTGACCGTATGCTGGACATGGGATTTGAACCTCAAATAAGGAAGATTGTGAATGAGGTACCTGCTCGCCGCCAGACCCTAATGTATACAGCAACTTGGCCAAAGGAGGTTCGCAAGATTGCAGCAGATCTGCTGGTCAATCCTGTTCAGGTTAACATTGGCAATGTTGATGAACTGGTTGCGAATAAATCGATCACACAGTATATTGAAGTACTCGCCCCAATGGAGAAACACAGGCGACTGGAGCAAATATTGCGATCTCAAGAGCCAGGATCCAAAATAATAATCTTTTGTTCAACCAAGAAGATGTGCGATCAACTTTCTCGCAACCTAACCCGCCAGTTTGGAGCTGCCGCAATTCATGGTGACAAATCTCAGAGTGAGAGGGACTACGTGTTGAATCAATTTCGCTCTGGGAGGACTCCAATTCTTGTAGCAACTGATGTTGCAGCTCGAGGATTGGACATCAAGGACATAAGGGTGGTTATCAACTACGACTTCCCCACTGGAGTGGAGGATTATGTTCACAGAATTGGGAGAACTGGAAGAGCTGGTGCCACTGGGCTGGCTTACACATTCTTCGGTGATCAGGATTCAAAGTACGCATCAGATCTCATCAAAGTTTTGGAAGGGGCAAATCAGCGTGTCCCCCCAGAAATTCGTGAGATGGCTACCCGTGGTGGTGGGATGAACAGGTTCAGACGTTGGGGTTCTGGGTCTGGTGGCCGTGATGGGGGTCGTGGTGGACGAAATGATTCAAGTTATGGTGGAAGGGATGGTGGGAGGGGAGGCGGATGGGGATTTACTCCCTCTTCTGGCAGGTATGACCGTGGTCACAACAATGGGTATGATAGAGGCCGAAGCCCTGACAAGGGGTCAGGACATAGAGGCTCTAACCGCAGCCGTAGTCGTAGTCTTGAGAGGTTCGACAAGGCTCTGCCTACAGGTGGAGGCTCTGCAGGGTGGAGTTTTCACAAAGCAATGATGGAACGTGAACGGTCATCGCCGCCACCTCCACGGTCACTCCCGTATGGTGGTGGGGTGGATGAAGCTGAGGAAGGTATGATACCTCAAGAAGAGGAGGGTGGGTATCATATTGCAAATGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009628 GO:0009651 GO:0009987 GO:0010501 GO:0016070 GO:0016301 GO:0016310 GO:0016462 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031974 GO:0031981 GO:0034641 GO:0036211 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046777 GO:0050896 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140096 GO:0140098 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C WW

Protein Analysis

689

Amino Acids

74.6

Weight (kDa)

9.48

Isoelectric Point (pI)

54.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002971)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01540 AT3G01540 AT3G01540 AT3G01540 AT5G14610 AT5G14610 AT5G14610 AT5G14610 AT5G14610 AT5G14610 AT5G14610
fragaria_vesca	FvH4_3g33550 FvH4_6g50990
malus_domestica	MD09G1029800.v1.1 MD17G1031800.v1.1
prunus_persica	Prupe.3G287500_v2.0.a1 Prupe.3G287500_v2.0.a1
pyrus_communis	pycom17g02940
rosa_chinensis	RchiOBHm_Chr2g0172491 RchiOBHm_Chr3g0496011
rosa_laevigata	RLG00000022110 RLG00000026510
rosa_multiflora	Rmu_co8447803.1_g000001 Rmu_sc0008577.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079810 Rroxscaffold_6G00401610
rosa_rugosa	Rorug02G0559500
rosa_samantha	Rh1CG060200 Rh2AG635200 Rh2BG648700 Rh2CG615300 Rh2DG663200 Rh3AG325700 Rh5DG348900 Rh5DG552200 Rh7AG279200 Rh7CG298300
rosa_wichuraiana	Rw2G052550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	235
Acc36I	ACCTGC	3 cut(s)	539, 1027, 1767
Acc65I	GGTACC	1 cut(s)	1015
AccB1I	GGYRCC	2 cut(s)	1015, 1511
AccB7I	CCANNNNNTGG	1 cut(s)	69
AccI	GTMKAC	2 cut(s)	448, 1043
AccIII	TCCGGA	2 cut(s)	43, 238
AciI	CCGC	7 cut(s)	889, 1027, 1294, 1311, 1749, 1855, 1964
AclWI	GGATC	4 cut(s)	388, 409, 1224, 1237
AcoI	YGGCCR	4 cut(s)	587, 886, 1055, 1681
AcsI	RAATTY	2 cut(s)	287, 1614
AcuI	CTGAAG	1 cut(s)	186
AcyI	GRCGYC	1 cut(s)	232
AdeI	CACNNNGTG	1 cut(s)	368
AfaI	GTAC	5 cut(s)	540, 941, 1017, 1170, 1559
AflIII	ACRYGT	1 cut(s)	1350
AhdI	GACNNNNNGTC	1 cut(s)	1831
AjnI	CCWGG	3 cut(s)	664, 883, 1225
AleI	CACNNNNGTG	1 cut(s)	1466
AluBI	AGCT	8 cut(s)	161, 506, 745, 824, 1307, 1409, 1508, 2009
AluI	AGCT	8 cut(s)	161, 506, 745, 824, 1307, 1409, 1508, 2009
Alw21I	GWGCWC	2 cut(s)	373, 826
Alw26I	GTCTC	1 cut(s)	116
Alw44I	GTGCAC	1 cut(s)	369
AlwI	GGATC	4 cut(s)	388, 409, 1224, 1237
AlwNI	CAGNNNCTG	1 cut(s)	413
Ama87I	CYCGRG	2 cut(s)	119, 1410
Aor13HI	TCCGGA	2 cut(s)	43, 238
AoxI	GGCC	6 cut(s)	146, 587, 886, 1055, 1681, 1813
ApaLI	GTGCAC	1 cut(s)	369
ApeKI	GCWGC	7 cut(s)	5, 270, 687, 1079, 1307, 1406, 1857
ApoI	RAATTY	2 cut(s)	287, 1614
ArsI	GACNNNNNNTTYG	2 cut(s)	965, 997
Asp700I	GAANNNNTTC	2 cut(s)	1652, 1711
Asp718I	GGTACC	1 cut(s)	1015
AspLEI	GCGC	1 cut(s)	687
AspS9I	GGNCC	5 cut(s)	29, 49, 299, 710, 833
AsuHPI	GGTGA	4 cut(s)	482, 723, 1334, 1553
AvaI	CYCGRG	2 cut(s)	119, 1410
AvaII	GGWCC	5 cut(s)	29, 49, 299, 710, 833
BaeGI	GKGCMC	1 cut(s)	373
BalI	TGGCCA	1 cut(s)	1057
BamHI	GGATCC	1 cut(s)	1229
BanI	GGYRCC	2 cut(s)	1015, 1511
BanII	GRGCYC	2 cut(s)	158, 826
BarI	GAAGNNNNNNTAC	2 cut(s)	2007, 2039
BbsI	GAAGAC	2 cut(s)	171, 650
Bbv12I	GWGCWC	2 cut(s)	373, 826
BbvCI	CCTCAGC	2 cut(s)	432, 2010
BbvI	GCAGC	6 cut(s)	282, 699, 1091, 1294, 1418, 1869
BccI	CCATC	9 cut(s)	80, 526, 684, 936, 1618, 1682, 1727, 1746, 1936
BceAI	ACGGC	4 cut(s)	160, 675, 1668, 1845
BciT130I	CCWGG	3 cut(s)	666, 885, 1227
BclI	TGATCA	1 cut(s)	1543
BcoDI	GTCTC	1 cut(s)	116
BfaI	CTAG	1 cut(s)	24
BfmI	CTRYAG	2 cut(s)	1899, 1914
BfuAI	ACCTGC	3 cut(s)	539, 1027, 1767
BglII	AGATCT	2 cut(s)	1084, 1567
BlpI	GCTNAGC	1 cut(s)	157
BmcAI	AGTACT	1 cut(s)	1170
Bme1390I	CCNGG	3 cut(s)	666, 885, 1227
Bme18I	GGWCC	5 cut(s)	29, 49, 299, 710, 833
BmeRI	GACNNNNNGTC	1 cut(s)	1831
BmeT110I	CYCGRG	2 cut(s)	119, 1410
BmgT120I	GGNCC	5 cut(s)	29, 49, 299, 710, 833
BmiI	GGNNCC	9 cut(s)	51, 116, 711, 712, 834, 862, 1017, 1231, 1513
BmrFI	CCNGG	3 cut(s)	666, 885, 1227
BmrI	ACTGGG	2 cut(s)	105, 1527
BmsI	GCATC	1 cut(s)	1571
BmuI	ACTGGG	2 cut(s)	105, 1527
BoxI	GACNNNNGTC	1 cut(s)	1788
BpiI	GAAGAC	2 cut(s)	171, 650
BpmI	CTGGAG	2 cut(s)	1220, 1485
Bpu10I	CCTNAGC	2 cut(s)	432, 2010
Bpu1102I	GCTNAGC	1 cut(s)	157
BpuEI	CTTGAG	5 cut(s)	665, 775, 1203, 1895, 2013
Bsa29I	ATCGAT	1 cut(s)	1148
BsaAI	YACGTR	1 cut(s)	1351
BsaHI	GRCGYC	1 cut(s)	232
BsaJI	CCNNGG	6 cut(s)	68, 648, 856, 1633, 1786, 1973
BsaWI	WCCGGW	2 cut(s)	43, 238
BsaXI	ACNNNNNCTCC	6 cut(s)	852, 882, 1965, 1995, 2030, 2060
Bse118I	RCCGGY	1 cut(s)	589
Bse1I	ACTGG	9 cut(s)	100, 418, 514, 1137, 1203, 1297, 1468, 1504, 1522
Bse3DI	GCAATG	4 cut(s)	280, 621, 1126, 1944
BseAI	TCCGGA	2 cut(s)	43, 238
BseBI	CCWGG	3 cut(s)	666, 885, 1227
BseCI	ATCGAT	1 cut(s)	1148
BseDI	CCNNGG	6 cut(s)	68, 648, 856, 1633, 1786, 1973
BseGI	GGATG	8 cut(s)	247, 518, 672, 958, 1650, 1738, 1757, 2008
BseMI	GCAATG	4 cut(s)	280, 621, 1126, 1944
BseMII	CTCAG	6 cut(s)	171, 380, 423, 716, 1346, 2001
BseNI	ACTGG	9 cut(s)	100, 418, 514, 1137, 1203, 1297, 1468, 1504, 1522
BseRI	GAGGAG	4 cut(s)	153, 834, 873, 2051
BseSI	GKGCMC	1 cut(s)	373
BseXI	GCAGC	6 cut(s)	282, 699, 1091, 1294, 1418, 1869
BshFI	GGCC	6 cut(s)	148, 589, 888, 1057, 1683, 1815
BshNI	GGYRCC	2 cut(s)	1015, 1511
BshVI	ATCGAT	1 cut(s)	1148
BsiHKAI	GWGCWC	2 cut(s)	373, 826
BsiHKCI	CYCGRG	2 cut(s)	119, 1410
BsiSI	CCGG	3 cut(s)	44, 239, 590
BslFI	GGGAC	4 cut(s)	373, 696, 1358, 1589
BsmAI	GTCTC	1 cut(s)	116
BsmFI	GGGAC	4 cut(s)	373, 696, 1358, 1589
BsnI	GGCC	6 cut(s)	148, 589, 888, 1057, 1683, 1815
BsoBI	CYCGRG	2 cut(s)	119, 1410
Bsp1286I	GDGCHC	3 cut(s)	158, 373, 826
Bsp13I	TCCGGA	2 cut(s)	43, 238
Bsp143I	GATC	9 cut(s)	380, 401, 1084, 1149, 1214, 1229, 1270, 1543, 1567
Bsp1720I	GCTNAGC	1 cut(s)	157
Bsp19I	CCATGG	1 cut(s)	68
BspACI	CCGC	7 cut(s)	889, 1027, 1294, 1311, 1749, 1855, 1964
BspANI	GGCC	6 cut(s)	148, 589, 888, 1057, 1683, 1815
BspCNI	CTCAG	6 cut(s)	170, 381, 424, 715, 1345, 2002
BspDI	ATCGAT	1 cut(s)	1148
BspEI	TCCGGA	2 cut(s)	43, 238
BspLI	GGNNCC	9 cut(s)	51, 116, 711, 712, 834, 862, 1017, 1231, 1513
BspMAI	CTGCAG	1 cut(s)	1918
BspMI	ACCTGC	3 cut(s)	539, 1027, 1767
BspPI	GGATC	4 cut(s)	388, 409, 1224, 1237
BspQI	GCTCTTC	2 cut(s)	603, 1498
BspT107I	GGYRCC	2 cut(s)	1015, 1511
BsrDI	GCAATG	4 cut(s)	280, 621, 1126, 1944
BsrFI	RCCGGY	1 cut(s)	589
BsrI	ACTGG	9 cut(s)	100, 418, 514, 1137, 1203, 1297, 1468, 1504, 1522
BssAI	RCCGGY	1 cut(s)	589
BssECI	CCNNGG	6 cut(s)	68, 648, 856, 1633, 1786, 1973
BssMI	GATC	9 cut(s)	380, 401, 1084, 1149, 1214, 1229, 1270, 1543, 1567
BssNAI	GTATAC	1 cut(s)	1044
BssNI	GRCGYC	1 cut(s)	232
BssT1I	CCWWGG	2 cut(s)	68, 648
Bst1107I	GTATAC	1 cut(s)	1044
Bst2UI	CCWGG	3 cut(s)	666, 885, 1227
Bst4CI	ACNGT	9 cut(s)	334, 582, 718, 840, 965, 1158, 1787, 1956, 1977
Bst6I	CTCTTC	6 cut(s)	63, 603, 908, 1498, 1774, 2028
BstACI	GRCGYC	1 cut(s)	232
BstAPI	GCANNNNNTGC	2 cut(s)	326, 1210
BstBAI	YACGTR	1 cut(s)	1351
BstC8I	GCNNGC	3 cut(s)	747, 1024, 1524
BstDEI	CTNAG	9 cut(s)	157, 365, 389, 432, 530, 702, 943, 1332, 2010
BstDSI	CCRYGG	4 cut(s)	68, 1633, 1786, 1973
BstF5I	GGATG	8 cut(s)	247, 518, 672, 958, 1650, 1738, 1757, 2008
BstHHI	GCGC	1 cut(s)	687
BstKTI	GATC	9 cut(s)	383, 404, 1087, 1152, 1217, 1232, 1273, 1546, 1570
BstMAI	GTCTC	1 cut(s)	116
BstMBI	GATC	9 cut(s)	380, 401, 1084, 1149, 1214, 1229, 1270, 1543, 1567
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 270, 326, 1201, 1210, 1854
BstNI	CCWGG	3 cut(s)	666, 885, 1227
BstPAI	GACNNNNGTC	1 cut(s)	1788
BstSCI	CCNGG	3 cut(s)	664, 883, 1225
BstSFI	CTRYAG	2 cut(s)	1899, 1914
BstSLI	GKGCMC	1 cut(s)	373
BstV1I	GCAGC	6 cut(s)	282, 699, 1091, 1294, 1418, 1869
BstV2I	GAAGAC	2 cut(s)	171, 650
BstX2I	RGATCY	4 cut(s)	380, 1084, 1229, 1567
BstXI	CCANNNNNNTGG	3 cut(s)	721, 1468, 1522
BstYI	RGATCY	4 cut(s)	380, 1084, 1229, 1567
BstZ17I	GTATAC	1 cut(s)	1044
Bsu15I	ATCGAT	1 cut(s)	1148
BsuRI	GGCC	6 cut(s)	148, 589, 888, 1057, 1683, 1815
BsuTUI	ATCGAT	1 cut(s)	1148
BtgI	CCRYGG	4 cut(s)	68, 1633, 1786, 1973
BtgZI	GCGATG	1 cut(s)	1944
BtsCI	GGATG	8 cut(s)	247, 518, 672, 958, 1650, 1738, 1757, 2008
BtsI	GCAGTG	2 cut(s)	9, 777
BtsIMutI	CAGTG	6 cut(s)	9, 411, 714, 777, 1461, 1515
BveI	ACCTGC	3 cut(s)	539, 1027, 1767
Cac8I	GCNNGC	3 cut(s)	747, 1024, 1524
CaiI	CAGNNNCTG	1 cut(s)	413
CfoI	GCGC	1 cut(s)	687
Cfr10I	RCCGGY	1 cut(s)	589
Cfr13I	GGNCC	5 cut(s)	29, 49, 299, 710, 833
ClaI	ATCGAT	1 cut(s)	1148
CseI	GACGC	1 cut(s)	302
Csp6I	GTAC	5 cut(s)	539, 940, 1016, 1169, 1558
CviAII	CATG	4 cut(s)	69, 209, 976, 1319
CviQI	GTAC	5 cut(s)	539, 940, 1016, 1169, 1558
DdeI	CTNAG	9 cut(s)	157, 365, 389, 432, 530, 702, 943, 1332, 2010
DpnI	GATC	9 cut(s)	382, 403, 1086, 1151, 1216, 1231, 1272, 1545, 1569
DpnII	GATC	9 cut(s)	380, 401, 1084, 1149, 1214, 1229, 1270, 1543, 1567
DraIII	CACNNNGTG	1 cut(s)	368
DriI	GACNNNNNGTC	1 cut(s)	1831
EaeI	YGGCCR	4 cut(s)	587, 886, 1055, 1681
Eam1104I	CTCTTC	6 cut(s)	63, 603, 908, 1498, 1774, 2028
Eam1105I	GACNNNNNGTC	1 cut(s)	1831
EarI	CTCTTC	6 cut(s)	63, 603, 908, 1498, 1774, 2028
EciI	GGCGGA	1 cut(s)	1764
Ecl136II	GAGCTC	1 cut(s)	824
Eco130I	CCWWGG	2 cut(s)	68, 648
Eco147I	AGGCCT	1 cut(s)	148
Eco24I	GRGCYC	2 cut(s)	158, 826
Eco32I	GATATC	1 cut(s)	798
Eco47I	GGWCC	5 cut(s)	29, 49, 299, 710, 833
Eco53kI	GAGCTC	1 cut(s)	824
Eco57I	CTGAAG	1 cut(s)	186
Eco88I	CYCGRG	2 cut(s)	119, 1410
EcoICRI	GAGCTC	1 cut(s)	824
EcoO109I	RGGNCCY	2 cut(s)	49, 710
EcoRII	CCWGG	3 cut(s)	664, 883, 1225
EcoRV	GATATC	1 cut(s)	798
EcoT14I	CCWWGG	2 cut(s)	68, 648
EcoT22I	ATGCAT	1 cut(s)	2065
EcoT38I	GRGCYC	2 cut(s)	158, 826
ErhI	CCWWGG	2 cut(s)	68, 648
FaeI	CATG	4 cut(s)	72, 212, 979, 1322
FalI	AAGNNNNNCTT	2 cut(s)	784, 816
FaqI	GGGAC	4 cut(s)	373, 696, 1358, 1589
FatI	CATG	4 cut(s)	68, 208, 975, 1318
FauI	CCCGC	1 cut(s)	1301
FbaI	TGATCA	1 cut(s)	1543
FblI	GTMKAC	2 cut(s)	448, 1043
FokI	GGATG	8 cut(s)	254, 505, 659, 965, 1657, 1745, 1764, 2015
FriOI	GRGCYC	2 cut(s)	158, 826
FspBI	CTAG	1 cut(s)	24
GlaI	GCGC	1 cut(s)	686
GsuI	CTGGAG	2 cut(s)	1220, 1485
HaeIII	GGCC	6 cut(s)	148, 589, 888, 1057, 1683, 1815
HapII	CCGG	3 cut(s)	44, 239, 590
HgaI	GACGC	1 cut(s)	302
HhaI	GCGC	1 cut(s)	687
Hin1I	GRCGYC	1 cut(s)	232
Hin1II	CATG	4 cut(s)	72, 212, 979, 1322
Hin6I	GCGC	1 cut(s)	685
HinP1I	GCGC	1 cut(s)	685
HincII	GTYRAC	2 cut(s)	449, 1111
HindII	GTYRAC	2 cut(s)	449, 1111
HinfI	GANTC	8 cut(s)	526, 669, 757, 918, 1357, 1378, 1550, 1712
HpaI	GTTAAC	1 cut(s)	1111
HpaII	CCGG	3 cut(s)	44, 239, 590
HphI	GGTGA	4 cut(s)	482, 723, 1334, 1553
Hpy166II	GTNNAC	8 cut(s)	371, 449, 836, 1044, 1111, 1483, 1703, 1952
Hpy188I	TCNGA	6 cut(s)	390, 409, 523, 1335, 1567, 1658
Hpy8I	GTNNAC	8 cut(s)	371, 449, 836, 1044, 1111, 1483, 1703, 1952
Hpy99I	CGWCG	2 cut(s)	237, 450
HpyAV	CCTTC	4 cut(s)	499, 1580, 1722, 2009
HpyCH4III	ACNGT	9 cut(s)	334, 582, 718, 840, 965, 1158, 1787, 1956, 1977
HpyCH4IV	ACGT	4 cut(s)	232, 1350, 1660, 1948
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 270, 326, 1201, 1210, 1854
HpyF3I	CTNAG	9 cut(s)	157, 365, 389, 432, 530, 702, 943, 1332, 2010
HpySE526I	ACGT	4 cut(s)	232, 1350, 1660, 1948
Hsp92I	GRCGYC	1 cut(s)	232
Hsp92II	CATG	4 cut(s)	72, 212, 979, 1322
HspAI	GCGC	1 cut(s)	685
KflI	GGGWCCC	1 cut(s)	710
Kpn2I	TCCGGA	2 cut(s)	43, 238
KpnI	GGTACC	1 cut(s)	1019
Ksp22I	TGATCA	1 cut(s)	1543
KspAI	GTTAAC	1 cut(s)	1111
Kzo9I	GATC	9 cut(s)	380, 401, 1084, 1149, 1214, 1229, 1270, 1543, 1567
LguI	GCTCTTC	2 cut(s)	603, 1498
LmnI	GCTCC	8 cut(s)	46, 166, 742, 821, 829, 860, 1201, 1304
Lsp1109I	GCAGC	6 cut(s)	282, 699, 1091, 1294, 1418, 1869
LweI	GCATC	1 cut(s)	1571
MaeI	CTAG	1 cut(s)	24
MaeII	ACGT	4 cut(s)	232, 1350, 1660, 1948
MaeIII	GTNAC	4 cut(s)	130, 1322, 1790, 1977
MalI	GATC	9 cut(s)	382, 403, 1086, 1151, 1216, 1231, 1272, 1545, 1569
MboI	GATC	9 cut(s)	380, 401, 1084, 1149, 1214, 1229, 1270, 1543, 1567
MflI	RGATCY	4 cut(s)	380, 1084, 1229, 1567
MhlI	GDGCHC	3 cut(s)	158, 373, 826
MlsI	TGGCCA	1 cut(s)	1057
MluCI	AATT	8 cut(s)	287, 417, 570, 1314, 1361, 1383, 1488, 1614
MluNI	TGGCCA	1 cut(s)	1057
MlyI	GAGTC	1 cut(s)	1372
MmeI	TCCRAC	1 cut(s)	930
Mox20I	TGGCCA	1 cut(s)	1057
Mph1103I	ATGCAT	1 cut(s)	2065
MroI	TCCGGA	2 cut(s)	43, 238
MroXI	GAANNNNTTC	2 cut(s)	1652, 1711
MscI	TGGCCA	1 cut(s)	1057
MseI	TTAA	2 cut(s)	170, 1110
MslI	CAYNNNNRTG	3 cut(s)	1436, 1466, 1797
Msp20I	TGGCCA	1 cut(s)	1057
MspI	CCGG	3 cut(s)	44, 239, 590
MspR9I	CCNGG	3 cut(s)	666, 885, 1227
MvaI	CCWGG	3 cut(s)	666, 885, 1227
MwoI	GCNNNNNNNGC	6 cut(s)	11, 270, 326, 1201, 1210, 1854
NcoI	CCATGG	1 cut(s)	68
NdeII	GATC	9 cut(s)	380, 401, 1084, 1149, 1214, 1229, 1270, 1543, 1567
NlaIII	CATG	4 cut(s)	72, 212, 979, 1322
NlaIV	GGNNCC	9 cut(s)	51, 116, 711, 712, 834, 862, 1017, 1231, 1513
NmuCI	GTSAC	3 cut(s)	1322, 1790, 1977
NsiI	ATGCAT	1 cut(s)	2065
OliI	CACNNNNGTG	1 cut(s)	1466
PaeR7I	CTCGAG	1 cut(s)	1410
PceI	AGGCCT	1 cut(s)	148
PciSI	GCTCTTC	2 cut(s)	603, 1498
PcsI	WCGNNNNNNNCGW	1 cut(s)	1702
PdmI	GAANNNNTTC	2 cut(s)	1652, 1711
PfeI	GAWTC	7 cut(s)	526, 669, 757, 918, 1357, 1550, 1712
PflFI	GACNNNGTC	1 cut(s)	234
PflMI	CCANNNNNTGG	1 cut(s)	69
PfoI	TCCNGGA	1 cut(s)	664
PleI	GAGTC	1 cut(s)	1372
PpsI	GAGTC	1 cut(s)	1372
Ppu21I	YACGTR	1 cut(s)	1351
PpuMI	RGGWCCY	2 cut(s)	49, 710
PshAI	GACNNNNGTC	1 cut(s)	1788
Psp124BI	GAGCTC	1 cut(s)	826
Psp5II	RGGWCCY	2 cut(s)	49, 710
Psp6I	CCWGG	3 cut(s)	664, 883, 1225
PspGI	CCWGG	3 cut(s)	664, 883, 1225
PspN4I	GGNNCC	9 cut(s)	51, 116, 711, 712, 834, 862, 1017, 1231, 1513
PspPI	GGNCC	5 cut(s)	29, 49, 299, 710, 833
PspPPI	RGGWCCY	2 cut(s)	49, 710
PspXI	VCTCGAGB	1 cut(s)	1410
PstI	CTGCAG	1 cut(s)	1918
PstNI	CAGNNNCTG	1 cut(s)	413
PsuI	RGATCY	4 cut(s)	380, 1084, 1229, 1567
PsyI	GACNNNGTC	1 cut(s)	234
RsaI	GTAC	5 cut(s)	540, 941, 1017, 1170, 1559
RsaNI	GTAC	5 cut(s)	539, 940, 1016, 1169, 1558
RseI	CAYNNNNRTG	3 cut(s)	1436, 1466, 1797
SacI	GAGCTC	1 cut(s)	826
SalI	GTCGAC	1 cut(s)	447
SapI	GCTCTTC	2 cut(s)	603, 1498
SaqAI	TTAA	2 cut(s)	170, 1110
Sau3AI	GATC	9 cut(s)	380, 401, 1084, 1149, 1214, 1229, 1270, 1543, 1567
Sau96I	GGNCC	5 cut(s)	29, 49, 299, 710, 833
ScaI	AGTACT	1 cut(s)	1170
SchI	GAGTC	1 cut(s)	1372
ScrFI	CCNGG	3 cut(s)	666, 885, 1227
SduI	GDGCHC	3 cut(s)	158, 373, 826
SfaNI	GCATC	1 cut(s)	1571
SfcI	CTRYAG	2 cut(s)	1899, 1914
Sfr274I	CTCGAG	1 cut(s)	1410
SinI	GGWCC	5 cut(s)	29, 49, 299, 710, 833
SlaI	CTCGAG	1 cut(s)	1410
SmiMI	CAYNNNNRTG	3 cut(s)	1436, 1466, 1797
SmlI	CTYRAG	6 cut(s)	680, 790, 1218, 1410, 1874, 2028
SmoI	CTYRAG	6 cut(s)	680, 790, 1218, 1410, 1874, 2028
Sse9I	AATT	8 cut(s)	287, 417, 570, 1314, 1361, 1383, 1488, 1614
SseBI	AGGCCT	1 cut(s)	148
SsiI	CCGC	7 cut(s)	889, 1027, 1294, 1311, 1749, 1855, 1964
SspI	AATATT	1 cut(s)	1209
SspMI	CTAG	1 cut(s)	24
SstI	GAGCTC	1 cut(s)	826
StuI	AGGCCT	1 cut(s)	148
StyD4I	CCNGG	3 cut(s)	664, 883, 1225
StyI	CCWWGG	2 cut(s)	68, 648
TaaI	ACNGT	9 cut(s)	334, 582, 718, 840, 965, 1158, 1787, 1956, 1977
TaiI	ACGT	4 cut(s)	235, 1353, 1663, 1951
TaqI	TCGA	5 cut(s)	34, 448, 1148, 1411, 1884
TaqII	GACCGA	1 cut(s)	870
TasI	AATT	8 cut(s)	287, 417, 570, 1314, 1361, 1383, 1488, 1614
TatI	WGTACW	1 cut(s)	1168
TauI	GCSGC	4 cut(s)	891, 1029, 1313, 1966
TfiI	GAWTC	7 cut(s)	526, 669, 757, 918, 1357, 1550, 1712
Tru1I	TTAA	2 cut(s)	170, 1110
Tru9I	TTAA	2 cut(s)	170, 1110
TscAI	CASTG	6 cut(s)	16, 418, 721, 777, 1468, 1522
TseFI	GTSAC	3 cut(s)	1322, 1790, 1977
TseI	GCWGC	7 cut(s)	5, 270, 687, 1079, 1307, 1406, 1857
Tsp45I	GTSAC	3 cut(s)	1322, 1790, 1977
TspDTI	ATGAA	8 cut(s)	197, 486, 661, 926, 1143, 1307, 1661, 2019
TspGWI	ACGGA	1 cut(s)	156
TspRI	CASTG	6 cut(s)	16, 418, 721, 777, 1468, 1522
Tth111I	GACNNNGTC	1 cut(s)	234
Van91I	CCANNNNNTGG	1 cut(s)	69
VneI	GTGCAC	1 cut(s)	369
VpaK11BI	GGWCC	5 cut(s)	29, 49, 299, 710, 833
XapI	RAATTY	2 cut(s)	287, 1614
XhoI	CTCGAG	1 cut(s)	1410
XmiI	GTMKAC	2 cut(s)	448, 1043
XmnI	GAANNNNTTC	2 cut(s)	1652, 1711
XspI	CTAG	1 cut(s)	24
ZraI	GACGTC	1 cut(s)	233
ZrmI	AGTACT	1 cut(s)	1170
Zsp2I	ATGCAT	1 cut(s)	2065

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.