Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002971

Physical Location & Seq

Genomic Coordinates Forward (+)

4710563 .. 4715076

Gene Structure 4514 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G14610.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGGCTGCTACTGCTTCTGCAATTCGTTACGCTCCTGAGGATCCGAATCTCCCTAAGCCATGGAAAGGTCTTGTGGATAGTAGAACTGGGTACCTCTACTTTTGGAATCCAGAAACCAATGTTACTCAGTACGAGAGACCGGCTTCTTCCGCTCCTCCCAAGCTTGCTGCTATTCCCGTAAGCTCTTCGGTTCAGACTAATCAGCAATCTTCTTCTGGATTTAACTCTGGCAAGGAAGATGATAAGTATGGTAGGGGCAGTGATGGGCCTAAGTCTGACTCTGGATCAAGGTTTAATGAGGCTGGAAGAACTGGACCTATATCTTCTAATGATGCTGCTAGTGGACTAGGGAATGCTTCATCTGGTGGCTCATCTGCCAGAGGGCCTCCTTCTTCAGCCGCAGGAAATGAATTGTCCCCAGAGGCCTATTGCCGCAAACATGAAATTACTGTCAGTGGAGGCCAAGTACCACCACCTCTAATGTCTTTTGAAGCCACTGGTCTTCCCAATGAGCTTCTGCGGGAGTGTCCCAATTTTATGCCATATGCGCTCTCTTTTGTCCCAGGTGCGATATTTGCTCTTGGAGGAGCTAATGTCGTACGCTGTGCCACTTCTTTGGGGTTCTTGCAAATTATTTGGAGTGCCCTTTTTGGTGGACCAAATTTTTTGAGGTGTCCTCCTGCTGCAGGTTTCAACAGCTATCTTGTGTTGCCTGCAAACGGGAGGATGGTATACAGTGCAGGATTCTCAGCTCCATCTCCAATTCAAGCTCAGTCATGGCCAATTGCGATGCAAAACAGAGACATAGTAGCCATTGCTAAAACAGGCTCGGGAAAAACTTTGGGTTACTTGATTCCTGGTTTCATGCATCTCCAACGGATCCACAATGATTCACGAATGGGCCCAACGATCTTGGTCTTGTCCCCTACTAGGGAGTTGGCCACACAAATCCAAGTTGAAGCTCTGAAATTTGGCAAGTCATCTAAAATTTCGTGTGCGTGTTTGTATGGTGGAGCACCCAAGGGTCCTCAGCTGAAGGAAATAGAAAGAGGTGTAGATATTGTTGTTGCAACTCCCGGGCGACTGAATGATATCCTTGAAATGAAGAGAATCAGTCTGCATCAAGTATCTTACCTTGTGCTGGACGAGGCAGATAGAATGCTGGACATGGGGTTCGAACCTCAGATCAGAAAAATTGTGAATGAGGTTCCCACTAAGCGTCAAACCCTCATGTACACTGCAACATGGCCAAAGGAGGTGAGGAAAATCGCAGCTGATCTTCTTGTTAACCCTGCCCAGGTCAATATTGGTAATGTTGATGAGCTTGTGGCGAACAAGTCCATTACTCAGACTATTGAAGTCTTAGCACCGATGGAGAAACATAGTAGGTTAGAGCAGATATTGCGCTCTCAGGAACCGGGTTCCAAGATTATAATTTTCTGTTCAACCAAAAGGATGTGTGATCAACTGGCAAGGAACCTGACCCGTACGTTTGGAGCTGCTGCTATACATGGAGACAAGTCGCAGGCTGAGAGAGACGACGTACTGAATCAATTTAGAAGTGGTAGGACTCCTGTTCTTGTTGCAACTGATGTAGCTGCTCGTGGACTTGACGTTAAGGACATAAGGGTGGTGGTCAACTATGATTTTCCAAATGGAGTAGAGGATTATGTCCATAGAATTGGAAGAACTGGAAGAGCTGGAGCAACCGGTCTAGCTTACACCTTCTTTGGAGACCAAGATGCAAAACATGCTTCAGATCTGATCAAGATCTTGGAAGGAGCAAACCAGAAAGTTCCTCCACAGGTCCGCGAAATGGCTACACGTGGTGGTGGTGGAATGAACAAATTTCGTCGCTGGGGTACACCTTCCAGTGGTGGTGGTGGCGGCCGTGGTGGCTATGGTGATTCTGGTTATGGTGGTCGTGGTGAGTCTGGCTATGGTAGTCGTGGTGATTCTGGTTATGGTGGTCGTGGTGATTCTGGTGGTAGAGGAAGCTGGGCTCCTTCACGTGACAGTGGCAGCTCAGGATGGGGAAGAGAGAGAAGCCGTAGTCCTGAGAGATTCAGAGGAGGTCCACCGTCCACTTCATCTCCGCCTCGCAGCTTTCATGAGGCGATGATGATGAAAAATAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009628 GO:0009651 GO:0009987 GO:0010501 GO:0016070 GO:0016301 GO:0016310 GO:0016462 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031974 GO:0031981 GO:0034641 GO:0036211 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046777 GO:0050896 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140096 GO:0140098 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C WW

Protein Analysis

712

Amino Acids

76.26

Weight (kDa)

9.45

Isoelectric Point (pI)

45.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	25 - 55	1.2e-07	WW domain
DEAD	PF00270	193 - 362	9e-49	DEAD/DEAH box helicase
ResIII	PF04851	204 - 356	2.1e-07	Type III restriction enzyme, res subunit
Helicase_C	PF00271	400 - 508	7e-35	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002971)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01540 AT3G01540 AT3G01540 AT3G01540 AT5G14610 AT5G14610 AT5G14610 AT5G14610 AT5G14610 AT5G14610 AT5G14610
fragaria_vesca	FvH4_3g33550 FvH4_6g50990
malus_domestica	MD09G1029800.v1.1 MD17G1031800.v1.1
prunus_persica	Prupe.3G287500_v2.0.a1 Prupe.3G287500_v2.0.a1
pyrus_communis	pycom17g02940
rosa_chinensis	RchiOBHm_Chr2g0172491 RchiOBHm_Chr3g0496011
rosa_laevigata	RLG00000022110 RLG00000026510
rosa_multiflora	Rmu_co8447803.1_g000001 Rmu_sc0008577.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079810 Rroxscaffold_6G00401610
rosa_rugosa	Rorug02G0559500
rosa_samantha	Rh1CG060200 Rh2AG635200 Rh2BG648700 Rh2CG615300 Rh2DG663200 Rh3AG325700 Rh5DG348900 Rh5DG552200 Rh7AG279200 Rh7CG298300
rosa_wichuraiana	Rw2G052550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1433
Acc36I	ACCTGC	1 cut(s)	677
Acc65I	GGTACC	1 cut(s)	90
AccB1I	GGYRCC	1 cut(s)	90
AccBSI	CCGCTC	1 cut(s)	152
AccI	GTMKAC	1 cut(s)	732
AccII	CGCG	1 cut(s)	1812
AciI	CCGC	7 cut(s)	150, 399, 433, 520, 1810, 1887, 2096
AclWI	GGATC	5 cut(s)	35, 48, 292, 874, 887
AcoI	YGGCCR	4 cut(s)	779, 939, 1247, 1888
AcsI	RAATTY	4 cut(s)	661, 968, 987, 1847
AcuI	CTGAAG	3 cut(s)	378, 1055, 1740
AcvI	CACGTG	2 cut(s)	1826, 2012
AdeI	CACNNNGTG	1 cut(s)	1829
AfaI	GTAC	8 cut(s)	92, 131, 468, 600, 1235, 1489, 1545, 1864
AfiI	CCNNNNNNNGG	9 cut(s)	65, 686, 719, 930, 931, 1141, 1297, 1816, 1874
AflIII	ACRYGT	1 cut(s)	1823
AgeI	ACCGGT	1 cut(s)	1709
AgsI	TTSAA	7 cut(s)	491, 694, 767, 959, 1100, 1358, 1446
AjnI	CCWGG	3 cut(s)	562, 856, 1296
AloI	GAACNNNNNNTCC	2 cut(s)	1157, 1189
Alw21I	GWGCWC	1 cut(s)	1018
Alw26I	GTCTC	5 cut(s)	130, 795, 1509, 1530, 1728
AlwI	GGATC	5 cut(s)	35, 48, 292, 874, 887
Ama87I	CYCGRG	2 cut(s)	829, 1076
AoxI	GGCC	9 cut(s)	266, 383, 423, 460, 779, 901, 939, 1247, 1888
ApaI	GGGCCC	1 cut(s)	905
ApoI	RAATTY	4 cut(s)	661, 968, 987, 1847
ArsI	GACNNNNNNTTYG	2 cut(s)	1157, 1189
AsiGI	ACCGGT	1 cut(s)	1709
Asp718I	GGTACC	1 cut(s)	90
AspLEI	GCGC	2 cut(s)	550, 1407
AspS9I	GGNCC	9 cut(s)	266, 314, 383, 656, 901, 902, 1025, 1807, 2075
AsuC2I	CCSGG	3 cut(s)	1077, 1078, 1419
AsuHPI	GGTGA	5 cut(s)	1270, 1916, 1940, 1964, 1988
AsuII	TTCGAA	1 cut(s)	1176
AvaI	CYCGRG	2 cut(s)	829, 1076
AvaII	GGWCC	5 cut(s)	314, 656, 1025, 1807, 2075
AxyI	CCTNAGG	1 cut(s)	36
BaeGI	GKGCMC	2 cut(s)	646, 905
BalI	TGGCCA	3 cut(s)	781, 941, 1249
BamHI	GGATCC	2 cut(s)	40, 879
BanI	GGYRCC	1 cut(s)	90
BanII	GRGCYC	2 cut(s)	905, 2005
BauI	CACGAG	1 cut(s)	1602
BbrPI	CACGTG	2 cut(s)	1826, 2012
BbsI	GAAGAC	1 cut(s)	494
Bbv12I	GWGCWC	1 cut(s)	1018
BbvCI	CCTCAGC	1 cut(s)	1029
BbvI	GCAGC	9 cut(s)	154, 322, 670, 1283, 1486, 1489, 1585, 2034, 2115
BccI	CCATC	5 cut(s)	257, 721, 763, 1366, 2025
BceAI	ACGGC	2 cut(s)	1875, 2034
BciT130I	CCWGG	3 cut(s)	564, 858, 1298
BclI	TGATCA	2 cut(s)	1462, 1764
BcnI	CCSGG	3 cut(s)	1077, 1078, 1419
BcoDI	GTCTC	5 cut(s)	130, 795, 1509, 1530, 1728
BfaI	CTAG	4 cut(s)	339, 347, 930, 1715
BfmI	CTRYAG	1 cut(s)	684
BfuAI	ACCTGC	1 cut(s)	677
BglI	GCCNNNNNGGC	1 cut(s)	1896
BglII	AGATCT	2 cut(s)	1759, 1770
Bme1390I	CCNGG	6 cut(s)	564, 858, 1077, 1078, 1298, 1419
Bme18I	GGWCC	5 cut(s)	314, 656, 1025, 1807, 2075
BmeT110I	CYCGRG	2 cut(s)	829, 1076
BmgT120I	GGNCC	9 cut(s)	266, 314, 383, 656, 901, 902, 1025, 1807, 2075
BmrFI	CCNGG	6 cut(s)	564, 858, 1077, 1078, 1298, 1419
BmrI	ACTGGG	1 cut(s)	96
BmsI	GCATC	5 cut(s)	322, 780, 877, 1129, 1732
BmuI	ACTGGG	1 cut(s)	96
BpiI	GAAGAC	1 cut(s)	494
BplI	GAGNNNNNCTC	2 cut(s)	661, 693
BpmI	CTGGAG	1 cut(s)	1722
Bpu10I	CCTNAGC	3 cut(s)	54, 1029, 2026
Bpu14I	TTCGAA	1 cut(s)	1176
BpuMI	CCSGG	3 cut(s)	1077, 1078, 1419
BsaAI	YACGTR	2 cut(s)	1826, 2012
BsaBI	GATNNNNATC	2 cut(s)	45, 1769
BsaI	GGTCTC	2 cut(s)	130, 1728
BsaJI	CCNNGG	6 cut(s)	59, 562, 1020, 1076, 1296, 1891
BsaWI	WCCGGW	1 cut(s)	1709
BsaXI	ACNNNNNCTCC	6 cut(s)	450, 480, 579, 609, 2077, 2107
Bsc4I	CCNNNNNNNGG	9 cut(s)	65, 686, 719, 930, 931, 1141, 1297, 1816, 1874
Bse118I	RCCGGY	2 cut(s)	139, 1709
Bse1I	ACTGG	6 cut(s)	91, 316, 502, 1473, 1696, 1872
Bse21I	CCTNAGG	1 cut(s)	36
Bse3DI	GCAATG	1 cut(s)	813
Bse8I	GATNNNNATC	2 cut(s)	45, 1769
BseBI	CCWGG	3 cut(s)	564, 858, 1298
BseDI	CCNNGG	6 cut(s)	59, 562, 1020, 1076, 1296, 1891
BseGI	GGATG	3 cut(s)	732, 1461, 2036
BseJI	GATNNNNATC	2 cut(s)	45, 1769
BseLI	CCNNNNNNNGG	9 cut(s)	65, 686, 719, 930, 931, 1141, 1297, 1816, 1874
BseMI	GCAATG	1 cut(s)	813
BseNI	ACTGG	6 cut(s)	91, 316, 502, 1473, 1696, 1872
BseRI	GAGGAG	3 cut(s)	144, 600, 2085
BseSI	GKGCMC	2 cut(s)	646, 905
BseX3I	CGGCCG	1 cut(s)	1888
BseXI	GCAGC	9 cut(s)	154, 322, 670, 1283, 1486, 1489, 1585, 2034, 2115
BseYI	CCCAGC	2 cut(s)	1857, 1998
BsgI	GTGCAG	1 cut(s)	759
Bsh1236I	CGCG	1 cut(s)	1812
Bsh1285I	CGRYCG	1 cut(s)	1891
BshFI	GGCC	9 cut(s)	268, 385, 425, 462, 781, 903, 941, 1249, 1890
BshNI	GGYRCC	1 cut(s)	90
BshTI	ACCGGT	1 cut(s)	1709
BsiEI	CGRYCG	1 cut(s)	1891
BsiHKAI	GWGCWC	1 cut(s)	1018
BsiHKCI	CYCGRG	2 cut(s)	829, 1076
BsiSI	CCGG	4 cut(s)	140, 1077, 1418, 1710
BsiWI	CGTACG	2 cut(s)	598, 1487
BslFI	GGGAC	4 cut(s)	400, 513, 545, 907
BslI	CCNNNNNNNGG	9 cut(s)	65, 686, 719, 930, 931, 1141, 1297, 1816, 1874
BsmAI	GTCTC	5 cut(s)	130, 795, 1509, 1530, 1728
BsmBI	CGTCTC	1 cut(s)	1530
BsmFI	GGGAC	4 cut(s)	400, 513, 545, 907
BsmI	GAATGC	2 cut(s)	358, 1164
BsnI	GGCC	9 cut(s)	268, 385, 425, 462, 781, 903, 941, 1249, 1890
Bso31I	GGTCTC	2 cut(s)	130, 1728
BsoBI	CYCGRG	2 cut(s)	829, 1076
Bsp119I	TTCGAA	1 cut(s)	1176
Bsp120I	GGGCCC	1 cut(s)	901
Bsp1286I	GDGCHC	4 cut(s)	646, 905, 1018, 2005
Bsp1407I	TGTACA	1 cut(s)	1233
Bsp19I	CCATGG	1 cut(s)	59
BspACI	CCGC	7 cut(s)	150, 399, 433, 520, 1810, 1887, 2096
BspANI	GGCC	9 cut(s)	268, 385, 425, 462, 781, 903, 941, 1249, 1890
BspFNI	CGCG	1 cut(s)	1812
BspHI	TCATGA	1 cut(s)	2110
BspMAI	CTGCAG	1 cut(s)	688
BspMI	ACCTGC	1 cut(s)	677
BspPI	GGATC	5 cut(s)	35, 48, 292, 874, 887
BspQI	GCTCTTC	2 cut(s)	190, 1690
BspT104I	TTCGAA	1 cut(s)	1176
BspT107I	GGYRCC	1 cut(s)	90
BspTNI	GGTCTC	2 cut(s)	130, 1728
BsrBI	CCGCTC	1 cut(s)	152
BsrDI	GCAATG	1 cut(s)	813
BsrFI	RCCGGY	2 cut(s)	139, 1709
BsrGI	TGTACA	1 cut(s)	1233
BsrI	ACTGG	6 cut(s)	91, 316, 502, 1473, 1696, 1872
BssAI	RCCGGY	2 cut(s)	139, 1709
BssECI	CCNNGG	6 cut(s)	59, 562, 1020, 1076, 1296, 1891
BssNAI	GTATAC	1 cut(s)	733
BssSI	CACGAG	1 cut(s)	1602
BssT1I	CCWWGG	2 cut(s)	59, 1020
Bst1107I	GTATAC	1 cut(s)	733
Bst2BI	CACGAG	1 cut(s)	1602
Bst2UI	CCWGG	3 cut(s)	564, 858, 1298
Bst4CI	ACNGT	4 cut(s)	451, 737, 2018, 2082
Bst6I	CTCTTC	4 cut(s)	190, 1100, 1690, 2032
BstAPI	GCANNNNNTGC	2 cut(s)	1402, 1751
BstAUI	TGTACA	1 cut(s)	1233
BstBAI	YACGTR	2 cut(s)	1826, 2012
BstBI	TTCGAA	1 cut(s)	1176
BstC8I	GCNNGC	3 cut(s)	165, 714, 1527
BstDSI	CCRYGG	2 cut(s)	59, 1891
BstENI	CCTNNNNNAGG	1 cut(s)	684
BstF5I	GGATG	3 cut(s)	732, 1461, 2036
BstFNI	CGCG	1 cut(s)	1812
BstHHI	GCGC	2 cut(s)	550, 1407
BstMAI	GTCTC	5 cut(s)	130, 795, 1509, 1530, 1728
BstMCI	CGRYCG	1 cut(s)	1891
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 149, 547, 575, 1402, 1751, 1896
BstNI	CCWGG	3 cut(s)	564, 858, 1298
BstNSI	RCATGY	1 cut(s)	1754
BstSCI	CCNGG	6 cut(s)	562, 856, 1075, 1076, 1296, 1417
BstSFI	CTRYAG	1 cut(s)	684
BstSLI	GKGCMC	2 cut(s)	646, 905
BstUI	CGCG	1 cut(s)	1812
BstV1I	GCAGC	9 cut(s)	154, 322, 670, 1283, 1486, 1489, 1585, 2034, 2115
BstV2I	GAAGAC	1 cut(s)	494
BstX2I	RGATCY	4 cut(s)	40, 879, 1759, 1770
BstXI	CCANNNNNNTGG	2 cut(s)	616, 1682
BstYI	RGATCY	4 cut(s)	40, 879, 1759, 1770
BstZ17I	GTATAC	1 cut(s)	733
BstZI	CGGCCG	1 cut(s)	1888
Bsu36I	CCTNAGG	1 cut(s)	36
BsuRI	GGCC	9 cut(s)	268, 385, 425, 462, 781, 903, 941, 1249, 1890
BtgI	CCRYGG	2 cut(s)	59, 1891
BtgZI	GCGATG	2 cut(s)	803, 2132
BtsCI	GGATG	3 cut(s)	732, 1461, 2036
BtsI	GCAGTG	2 cut(s)	265, 1236
BtsIMutI	CAGTG	7 cut(s)	265, 460, 495, 742, 1236, 1879, 2023
BveI	ACCTGC	1 cut(s)	677
Cac8I	GCNNGC	3 cut(s)	165, 714, 1527
CciI	TCATGA	1 cut(s)	2110
CfoI	GCGC	2 cut(s)	550, 1407
Cfr10I	RCCGGY	2 cut(s)	139, 1709
Cfr13I	GGNCC	9 cut(s)	266, 314, 383, 656, 901, 902, 1025, 1807, 2075
Cfr9I	CCCGGG	1 cut(s)	1076
CseI	GACGC	1 cut(s)	1208
Csp6I	GTAC	8 cut(s)	91, 130, 467, 599, 1234, 1488, 1544, 1863
CspAI	ACCGGT	1 cut(s)	1709
CviQI	GTAC	8 cut(s)	91, 130, 467, 599, 1234, 1488, 1544, 1863
DraIII	CACNNNGTG	1 cut(s)	1829
EaeI	YGGCCR	4 cut(s)	779, 939, 1247, 1888
EagI	CGGCCG	1 cut(s)	1888
Eam1104I	CTCTTC	4 cut(s)	190, 1100, 1690, 2032
EarI	CTCTTC	4 cut(s)	190, 1100, 1690, 2032
EciI	GGCGGA	1 cut(s)	2085
EclXI	CGGCCG	1 cut(s)	1888
Eco130I	CCWWGG	2 cut(s)	59, 1020
Eco147I	AGGCCT	1 cut(s)	425
Eco24I	GRGCYC	2 cut(s)	905, 2005
Eco31I	GGTCTC	2 cut(s)	130, 1728
Eco32I	GATATC	1 cut(s)	1093
Eco47I	GGWCC	5 cut(s)	314, 656, 1025, 1807, 2075
Eco52I	CGGCCG	1 cut(s)	1888
Eco57I	CTGAAG	3 cut(s)	378, 1055, 1740
Eco72I	CACGTG	2 cut(s)	1826, 2012
Eco81I	CCTNAGG	1 cut(s)	36
Eco88I	CYCGRG	2 cut(s)	829, 1076
EcoNI	CCTNNNNNAGG	1 cut(s)	684
EcoO109I	RGGNCCY	2 cut(s)	383, 1025
EcoRII	CCWGG	3 cut(s)	562, 856, 1296
EcoRV	GATATC	1 cut(s)	1093
EcoT14I	CCWWGG	2 cut(s)	59, 1020
EcoT22I	ATGCAT	1 cut(s)	870
EcoT38I	GRGCYC	2 cut(s)	905, 2005
ErhI	CCWWGG	2 cut(s)	59, 1020
Esp3I	CGTCTC	1 cut(s)	1530
FaqI	GGGAC	4 cut(s)	400, 513, 545, 907
FauI	CCCGC	1 cut(s)	513
FauNDI	CATATG	1 cut(s)	544
FbaI	TGATCA	2 cut(s)	1462, 1764
FblI	GTMKAC	1 cut(s)	732
FokI	GGATG	3 cut(s)	739, 1468, 2043
FriOI	GRGCYC	2 cut(s)	905, 2005
FspBI	CTAG	4 cut(s)	339, 347, 930, 1715
GlaI	GCGC	2 cut(s)	549, 1406
GsaI	CCCAGC	2 cut(s)	1861, 2002
GsuI	CTGGAG	1 cut(s)	1722
HaeIII	GGCC	9 cut(s)	268, 385, 425, 462, 781, 903, 941, 1249, 1890
HapII	CCGG	4 cut(s)	140, 1077, 1418, 1710
HgaI	GACGC	1 cut(s)	1208
HhaI	GCGC	2 cut(s)	550, 1407
Hin6I	GCGC	2 cut(s)	548, 1405
HinP1I	GCGC	2 cut(s)	548, 1405
HincII	GTYRAC	2 cut(s)	1288, 1639
HindII	GTYRAC	2 cut(s)	1288, 1639
HindIII	AAGCTT	1 cut(s)	161
HpaI	GTTAAC	1 cut(s)	1288
HpaII	CCGG	4 cut(s)	140, 1077, 1418, 1710
HphI	GGTGA	5 cut(s)	1270, 1916, 1940, 1964, 1988
Hpy99I	CGWCG	2 cut(s)	1544, 1857
HpyAV	CCTTC	6 cut(s)	399, 1030, 1735, 1772, 1878, 2016
HpyCH4III	ACNGT	4 cut(s)	451, 737, 2018, 2082
HpyCH4IV	ACGT	5 cut(s)	1490, 1542, 1614, 1825, 2011
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 149, 547, 575, 1402, 1751, 1896
HpySE526I	ACGT	5 cut(s)	1490, 1542, 1614, 1825, 2011
HspAI	GCGC	2 cut(s)	548, 1405
KpnI	GGTACC	1 cut(s)	94
Ksp22I	TGATCA	2 cut(s)	1462, 1764
KspAI	GTTAAC	1 cut(s)	1288
LguI	GCTCTTC	2 cut(s)	190, 1690
LmnI	GCTCC	9 cut(s)	37, 157, 587, 757, 1013, 1496, 1703, 1781, 2008
Lsp1109I	GCAGC	9 cut(s)	154, 322, 670, 1283, 1486, 1489, 1585, 2034, 2115
LweI	GCATC	5 cut(s)	322, 780, 877, 1129, 1732
MaeI	CTAG	4 cut(s)	339, 347, 930, 1715
MaeII	ACGT	5 cut(s)	1490, 1542, 1614, 1825, 2011
MaeIII	GTNAC	4 cut(s)	26, 121, 845, 2012
MbiI	CCGCTC	1 cut(s)	152
MfeI	CAATTG	1 cut(s)	783
MflI	RGATCY	4 cut(s)	40, 879, 1759, 1770
MhlI	GDGCHC	4 cut(s)	646, 905, 1018, 2005
MlsI	TGGCCA	3 cut(s)	781, 941, 1249
MluNI	TGGCCA	3 cut(s)	781, 941, 1249
MlyI	GAGTC	3 cut(s)	272, 1564, 1940
MmeI	TCCRAC	1 cut(s)	898
Mox20I	TGGCCA	3 cut(s)	781, 941, 1249
Mph1103I	ATGCAT	1 cut(s)	870
MscI	TGGCCA	3 cut(s)	781, 941, 1249
MseI	TTAA	4 cut(s)	222, 294, 1287, 1617
MslI	CAYNNNNRTG	1 cut(s)	1628
Msp20I	TGGCCA	3 cut(s)	781, 941, 1249
MspA1I	CMGCKG	2 cut(s)	1033, 1274
MspI	CCGG	4 cut(s)	140, 1077, 1418, 1710
MspR9I	CCNGG	6 cut(s)	564, 858, 1077, 1078, 1298, 1419
MunI	CAATTG	1 cut(s)	783
Mva1269I	GAATGC	2 cut(s)	358, 1164
MvaI	CCWGG	3 cut(s)	564, 858, 1298
MvnI	CGCG	1 cut(s)	1812
MwoI	GCNNNNNNNGC	7 cut(s)	11, 149, 547, 575, 1402, 1751, 1896
NciI	CCSGG	3 cut(s)	1077, 1078, 1419
NcoI	CCATGG	1 cut(s)	59
NdeI	CATATG	1 cut(s)	544
NmuCI	GTSAC	1 cut(s)	2012
NsiI	ATGCAT	1 cut(s)	870
NspI	RCATGY	1 cut(s)	1754
NspV	TTCGAA	1 cut(s)	1176
PagI	TCATGA	1 cut(s)	2110
PceI	AGGCCT	1 cut(s)	425
PciSI	GCTCTTC	2 cut(s)	190, 1690
PctI	GAATGC	2 cut(s)	358, 1164
Pfl23II	CGTACG	2 cut(s)	598, 1487
PinAI	ACCGGT	1 cut(s)	1709
PleI	GAGTC	3 cut(s)	272, 1564, 1939
PmaCI	CACGTG	2 cut(s)	1826, 2012
PmlI	CACGTG	2 cut(s)	1826, 2012
PpsI	GAGTC	3 cut(s)	272, 1564, 1939
Ppu21I	YACGTR	2 cut(s)	1826, 2012
PpuMI	RGGWCCY	1 cut(s)	1025
PsiI	TTATAA	1 cut(s)	1433
Psp5II	RGGWCCY	1 cut(s)	1025
Psp6I	CCWGG	3 cut(s)	562, 856, 1296
PspCI	CACGTG	2 cut(s)	1826, 2012
PspFI	CCCAGC	2 cut(s)	1857, 1998
PspGI	CCWGG	3 cut(s)	562, 856, 1296
PspLI	CGTACG	2 cut(s)	598, 1487
PspOMI	GGGCCC	1 cut(s)	901
PspPI	GGNCC	9 cut(s)	266, 314, 383, 656, 901, 902, 1025, 1807, 2075
PspPPI	RGGWCCY	1 cut(s)	1025
PstI	CTGCAG	1 cut(s)	688
PsuI	RGATCY	4 cut(s)	40, 879, 1759, 1770
PvuII	CAGCTG	2 cut(s)	1033, 1274
RsaI	GTAC	8 cut(s)	92, 131, 468, 600, 1235, 1489, 1545, 1864
RsaNI	GTAC	8 cut(s)	91, 130, 467, 599, 1234, 1488, 1544, 1863
RseI	CAYNNNNRTG	1 cut(s)	1628
SapI	GCTCTTC	2 cut(s)	190, 1690
SaqAI	TTAA	4 cut(s)	222, 294, 1287, 1617
Sau96I	GGNCC	9 cut(s)	266, 314, 383, 656, 901, 902, 1025, 1807, 2075
SchI	GAGTC	3 cut(s)	272, 1564, 1940
ScrFI	CCNGG	6 cut(s)	564, 858, 1077, 1078, 1298, 1419
SduI	GDGCHC	4 cut(s)	646, 905, 1018, 2005
SfaNI	GCATC	5 cut(s)	322, 780, 877, 1129, 1732
SfcI	CTRYAG	1 cut(s)	684
SfuI	TTCGAA	1 cut(s)	1176
SinI	GGWCC	5 cut(s)	314, 656, 1025, 1807, 2075
SmaI	CCCGGG	1 cut(s)	1078
SmiMI	CAYNNNNRTG	1 cut(s)	1628
SseBI	AGGCCT	1 cut(s)	425
SsiI	CCGC	7 cut(s)	150, 399, 433, 520, 1810, 1887, 2096
SspI	AATATT	1 cut(s)	1306
SspMI	CTAG	4 cut(s)	339, 347, 930, 1715
StuI	AGGCCT	1 cut(s)	425
StyD4I	CCNGG	6 cut(s)	562, 856, 1075, 1076, 1296, 1417
StyI	CCWWGG	2 cut(s)	59, 1020
TaaI	ACNGT	4 cut(s)	451, 737, 2018, 2082
TaiI	ACGT	5 cut(s)	1493, 1545, 1617, 1828, 2014
TaqI	TCGA	1 cut(s)	1176
TatI	WGTACW	1 cut(s)	1233
TauI	GCSGC	3 cut(s)	401, 435, 1890
Tru1I	TTAA	4 cut(s)	222, 294, 1287, 1617
Tru9I	TTAA	4 cut(s)	222, 294, 1287, 1617
TscAI	CASTG	7 cut(s)	265, 460, 502, 742, 1243, 1879, 2023
TseFI	GTSAC	1 cut(s)	2012
Tsp45I	GTSAC	1 cut(s)	2012
TspDTI	ATGAA	8 cut(s)	348, 423, 456, 853, 1118, 1856, 2079, 2099
TspGWI	ACGGA	1 cut(s)	892
TspMI	CCCGGG	1 cut(s)	1076
TspRI	CASTG	7 cut(s)	265, 460, 502, 742, 1243, 1879, 2023
VpaK11BI	GGWCC	5 cut(s)	314, 656, 1025, 1807, 2075
XagI	CCTNNNNNAGG	1 cut(s)	684
XapI	RAATTY	4 cut(s)	661, 968, 987, 1847
XceI	RCATGY	1 cut(s)	1754
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1304
XmaI	CCCGGG	1 cut(s)	1076
XmiI	GTMKAC	1 cut(s)	732
XspI	CTAG	4 cut(s)	339, 347, 930, 1715
Zsp2I	ATGCAT	1 cut(s)	870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.