Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005652

Physical Location & Seq

Genomic Coordinates Reverse (-)

4811486 .. 4815515

Gene Structure 4030 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G14400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGGGATTTAAACTGCAGATGAGCTGGATGCCGAGTCTACTGAGTCAAAAGCGTAGGAATGGTCCTCCCTTAGGGTTACGGAATCTCGGCAACACCTGTTACCTCAATAGTGTCCTTCAGTGTCTCACTTTCACTCCTCCTCTCGCTAATTTCTGCCTTACTCACAAACACTCCTCTCACTGCGACACATATGTGGATGGAGAGAGGAAAAGGGATTGTCCATTTTGCATAGTTGAGAAAAGAATAGCAAGGTCTCTTAGTGTGGATCTAACTACCGATGCGCCTAACAAGATTTCAAGCTGTCTCAAAATTTTTGCTGAGCATTTTAAGCTTGGTCGTCAAGAGGATGCTCATGAGTTCTTGCGCTATGTCATTGATGCATGCCACAATACGTCTCTCAGACTCAAGAAGTTGCGATACAACGGTAACGAGCCCTTTAATGGCAATAGTGTCGTGAAGGAGATTTTTGGTGGTGCTTTGCAGAGCCAGGTCAAGTGTTTGTCTTGTGGTGCGGAGTCTAATAAAGCCGATGAGATTATGGATATCAGTCTTGAGATTTTGCAGAGTAGCTCTGTGAAGGAGTCATTGCAAAAGTTCTTTCAATCAGAGATTTTAGATGGCAACAATAAGTATAGATGCGAGTCCTGTGAAAAACTGGTGACGGCGAGGAAGCAGATGTCTATACTGCAAGCGCCTAATATCCTTGTTATCCAATTGAAAAGGTTTGGGGGCATTTTTGGTGGGAAGATTGATAAAGCCATTTCATTTGGTGAGATTCTGGTTCTCTCGAACTTCATGAGTAAAGCAAGCAAGGACCCTCAACCGGAATACAAGCTCTTTGGGATAATTGTGCACTCAGGATTTTCTCCTGAATCTGGGCACTATTATGCATACGTTAAGGATTCCTTGGGTCGATGGTATTGCTGCAATGATTCGTTTGTCTCGCTCTCCACCTTGCAGGAGGTTTTATCAGAGAAAGCTTATATCCTGTTTTTCAGCCGTTCAAACCAGAGGCCAGCGTCTGCTAAAACTCTGGTAACATCCAATGGGACTACATCTCATGAAGTTAATGGCTGTGAGACATCAAATCCCCAGAAGTTTATTGGGCCCCTTAATGGTTTCAACATGAAACCTCAAGCCGAGCAGTCCTTCCAGAAGGGTAACCTGGCTTCTTCAAAGCCCCATAAATTTATTAGGCCCAAACCACGAGCCGAGCAGGCCCCACTAGAGGATAACCTGCTTTCTTCCAAAGTTGAAAAGGCGCCTTTAAGGCCACATGCGAAAGTCAGTATATCTGTCAACCTTGGTGCCAAAAGGGTCTCTCCTGTCAATGGTAGACTTTCTTTCCACCAAGATGAGAACATAGCTCCAAAGGCAAACAAAGAGAATAGTGTATCAGTTTTGCCGACTAAAGTTAACTCTGGTACGGAGAGAAAGTTTGGTACTGAAAATGGTGGCAATGGAGTTAAAGAAAACGGCAGTGCACCAGGTAGTAGTAATCATAAAGTGGCATTGCATCCTCATGAGCGGAGTAATGGCTCCAGCAATGGGGGTGATCACCACAAGGATAACTTACATCCATGTGGAAGTAATGGCTCACAAAATGGAACTGCTCACCCCGAAACTGAGAGGAACGGTGTTAGTACCACCCAATCCAAAGGCTTGTGTTCTTCAACAAAGGAAGACCCCTGCATTTTGCTGAGAAAAGACGAATCATCTCGGAATGAACTTGAAGCAATAAAAGAGAGCCTGAAAAAAGACGCGCTGTCACATCTACGTTCATGCGGATGGTATGACAAGGTTCTCATCTCCATGCATGCCAAGAAGAGATTGCGTACAGAGCAATCAGGTGGAGAAGATGGTAGCGACTTGAAAAGGAGGTTGATTGAAGATGTGAAATCAAGTTTGAAATCACAGATTCCAGAGGAGTTGAAAGCAGATCTGGTAAATCGTATCTGGGAGATTAGCAAGAAGAAGTACTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0022626 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

661

Amino Acids

73.29

Weight (kDa)

9.21

Isoelectric Point (pI)

57.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	25 - 332	1.5e-56	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	25 - 314	1.5e-18	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14400
fragaria_vesca	FvH4_3g16490 FvH4_3g16490 FvH4_3g16490 FvH4_3g16490
malus_domestica	MD05G1209600.v1.1 MD10G1195900.v1.1
prunus_persica	Prupe.4G147900_v2.0.a1
pyrus_communis	pycom05g19560 pycom10g16950
rosa_chinensis	RchiOBHm_Chr5g0027541
rosa_laevigata	RLG00000033025
rosa_multiflora	Rmu_co8326735.1_g000001 Rmu_co8467017.1_g000001 Rmu_sc0004493.1_g000008 Rmu_sc0007802.1_g000039 Rmu_sc0011056.1_g000009
rosa_roxburghii	Rroxscaffold_1G00052000 Rroxscaffold_1G00052020
rosa_rugosa	Rorug05G0099400 Rorug05G0099500 Rorug05G0099600
rosa_samantha	Rh5AG193700 Rh5BG191700 Rh5CG211900 Rh5DG193400 Rh5DG193600
rosa_wichuraiana	Rw5G017660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1245
AccB1I	GGYRCC	2 cut(s)	1261, 1307
AccBSI	CCGCTC	1 cut(s)	1528
AccI	GTMKAC	2 cut(s)	37, 1336
AccII	CGCG	1 cut(s)	1763
AciI	CCGC	3 cut(s)	512, 1528, 1785
AclWI	GGATC	1 cut(s)	273
AcsI	RAATTY	2 cut(s)	309, 1187
AcuI	CTGAAG	1 cut(s)	101
AcyI	GRCGYC	1 cut(s)	1262
AfaI	GTAC	5 cut(s)	1426, 1444, 1645, 1837, 1979
AfiI	CCNNNNNNNGG	8 cut(s)	71, 440, 823, 875, 1115, 1228, 1331, 1548
AhdI	GACNNNNNGTC	1 cut(s)	1765
AjnI	CCWGG	3 cut(s)	486, 1164, 1486
AleI	CACNNNNGTG	1 cut(s)	191
AluBI	AGCT	7 cut(s)	24, 300, 331, 570, 835, 980, 1367
AluI	AGCT	7 cut(s)	24, 300, 331, 570, 835, 980, 1367
Alw21I	GWGCWC	2 cut(s)	855, 1486
Alw26I	GTCTC	7 cut(s)	128, 258, 308, 399, 946, 1073, 1324
Alw44I	GTGCAC	2 cut(s)	851, 1482
AlwI	GGATC	1 cut(s)	273
AlwNI	CAGNNNCTG	1 cut(s)	1022
AoxI	GGCC	5 cut(s)	1013, 1106, 1196, 1218, 1271
ApaI	GGGCCC	1 cut(s)	1110
ApaLI	GTGCAC	2 cut(s)	851, 1482
ApeKI	GCWGC	1 cut(s)	924
ApoI	RAATTY	2 cut(s)	309, 1187
AspLEI	GCGC	5 cut(s)	283, 366, 694, 1264, 1765
AspS9I	GGNCC	6 cut(s)	62, 814, 1106, 1107, 1197, 1219
AsuHPI	GGTGA	5 cut(s)	670, 782, 1550, 1565, 1607
AvaII	GGWCC	2 cut(s)	62, 814
AxyI	CCTNAGG	1 cut(s)	70
BaeGI	GKGCMC	4 cut(s)	855, 882, 1110, 1486
BaeI	ACNNNNGTAYC	2 cut(s)	409, 442
BanI	GGYRCC	2 cut(s)	1261, 1307
BanII	GRGCYC	2 cut(s)	435, 1110
BarI	GAAGNNNNNNTAC	4 cut(s)	401, 433, 1153, 1185
BauI	CACGAG	2 cut(s)	1206, 1981
BbsI	GAAGAC	1 cut(s)	1689
Bbv12I	GWGCWC	2 cut(s)	855, 1486
BbvI	GCAGC	1 cut(s)	911
BccI	CCATC	5 cut(s)	191, 611, 909, 1782, 1853
BceAI	ACGGC	3 cut(s)	678, 984, 1492
BcgI	CGANNNNNNTGC	4 cut(s)	433, 467, 903, 937
BciT130I	CCWGG	3 cut(s)	488, 1166, 1488
BclI	TGATCA	1 cut(s)	1555
BcoDI	GTCTC	7 cut(s)	128, 258, 308, 399, 946, 1073, 1324
BfaI	CTAG	1 cut(s)	1226
BfmI	CTRYAG	1 cut(s)	14
BfoI	RGCGCY	2 cut(s)	695, 1265
BfuAI	ACCTGC	1 cut(s)	1245
BglI	GCCNNNNNGGC	2 cut(s)	1217, 1270
BglII	AGATCT	1 cut(s)	1939
BisI	GCNGC	1 cut(s)	925
BlpI	GCTNAGC	1 cut(s)	318
BlsI	GCNGC	1 cut(s)	926
BmcAI	AGTACT	1 cut(s)	1979
Bme1390I	CCNGG	3 cut(s)	488, 1166, 1488
Bme18I	GGWCC	2 cut(s)	62, 814
BmeRI	GACNNNNNGTC	1 cut(s)	1765
BmgT120I	GGNCC	6 cut(s)	62, 814, 1106, 1107, 1197, 1219
BmiI	GGNNCC	7 cut(s)	816, 1108, 1109, 1221, 1263, 1309, 1540
BmrFI	CCNGG	3 cut(s)	488, 1166, 1488
BmsI	GCATC	6 cut(s)	18, 268, 337, 367, 626, 1525
BpiI	GAAGAC	1 cut(s)	1689
BpmI	CTGGAG	1 cut(s)	1525
Bpu1102I	GCTNAGC	1 cut(s)	318
BpuEI	CTTGAG	3 cut(s)	389, 572, 1119
BsaHI	GRCGYC	1 cut(s)	1262
BsaI	GGTCTC	2 cut(s)	258, 1324
BsaJI	CCNNGG	2 cut(s)	906, 1303
BsaWI	WCCGGW	1 cut(s)	823
BsaXI	ACNNNNNCTCC	6 cut(s)	118, 148, 155, 185, 1421, 1451
Bsc4I	CCNNNNNNNGG	8 cut(s)	71, 440, 823, 875, 1115, 1228, 1331, 1548
Bse1I	ACTGG	1 cut(s)	660
Bse21I	CCTNAGG	1 cut(s)	70
Bse3DI	GCAATG	5 cut(s)	584, 934, 1465, 1511, 1552
BseBI	CCWGG	3 cut(s)	488, 1166, 1488
BseDI	CCNNGG	2 cut(s)	906, 1303
BseGI	GGATG	7 cut(s)	33, 202, 352, 1040, 1516, 1576, 1793
BseLI	CCNNNNNNNGG	8 cut(s)	71, 440, 823, 875, 1115, 1228, 1331, 1548
BseMI	GCAATG	5 cut(s)	584, 934, 1465, 1511, 1552
BseMII	CTCAG	6 cut(s)	32, 309, 412, 870, 1617, 1691
BseNI	ACTGG	1 cut(s)	660
BseRI	GAGGAG	4 cut(s)	126, 129, 163, 1940
BseSI	GKGCMC	4 cut(s)	855, 882, 1110, 1486
BseXI	GCAGC	1 cut(s)	911
Bsh1236I	CGCG	1 cut(s)	1763
BshFI	GGCC	5 cut(s)	1015, 1108, 1198, 1220, 1273
BshNI	GGYRCC	2 cut(s)	1261, 1307
BsiHKAI	GWGCWC	2 cut(s)	855, 1486
BsiSI	CCGG	1 cut(s)	824
BslFI	GGGAC	1 cut(s)	1063
BslI	CCNNNNNNNGG	8 cut(s)	71, 440, 823, 875, 1115, 1228, 1331, 1548
BsmAI	GTCTC	7 cut(s)	128, 258, 308, 399, 946, 1073, 1324
BsmBI	CGTCTC	1 cut(s)	399
BsmFI	GGGAC	1 cut(s)	1063
BsnI	GGCC	5 cut(s)	1015, 1108, 1198, 1220, 1273
Bso31I	GGTCTC	2 cut(s)	258, 1324
Bsp120I	GGGCCC	1 cut(s)	1106
Bsp1286I	GDGCHC	5 cut(s)	435, 855, 882, 1110, 1486
Bsp143I	GATC	3 cut(s)	265, 1555, 1939
Bsp1720I	GCTNAGC	1 cut(s)	318
BspACI	CCGC	3 cut(s)	512, 1528, 1785
BspANI	GGCC	5 cut(s)	1015, 1108, 1198, 1220, 1273
BspCNI	CTCAG	6 cut(s)	33, 310, 411, 869, 1618, 1692
BspFNI	CGCG	1 cut(s)	1763
BspHI	TCATGA	4 cut(s)	352, 795, 1060, 1522
BspLI	GGNNCC	7 cut(s)	816, 1108, 1109, 1221, 1263, 1309, 1540
BspMAI	CTGCAG	1 cut(s)	18
BspMI	ACCTGC	1 cut(s)	1245
BspPI	GGATC	1 cut(s)	273
BspT107I	GGYRCC	2 cut(s)	1261, 1307
BspTNI	GGTCTC	2 cut(s)	258, 1324
BsrBI	CCGCTC	1 cut(s)	1528
BsrDI	GCAATG	5 cut(s)	584, 934, 1465, 1511, 1552
BsrI	ACTGG	1 cut(s)	660
BssECI	CCNNGG	2 cut(s)	906, 1303
BssMI	GATC	3 cut(s)	265, 1555, 1939
BssNI	GRCGYC	1 cut(s)	1262
BssSI	CACGAG	2 cut(s)	1206, 1981
BssT1I	CCWWGG	2 cut(s)	906, 1303
Bst2BI	CACGAG	2 cut(s)	1206, 1981
Bst2UI	CCWGG	3 cut(s)	488, 1166, 1488
Bst4CI	ACNGT	2 cut(s)	425, 1637
Bst6I	CTCTTC	1 cut(s)	1820
BstACI	GRCGYC	1 cut(s)	1262
BstC8I	GCNNGC	6 cut(s)	382, 690, 808, 1017, 1218, 1818
BstDEI	CTNAG	8 cut(s)	41, 70, 257, 318, 398, 856, 1626, 1700
BstEII	GGTNACC	1 cut(s)	1160
BstENI	CCTNNNNNAGG	1 cut(s)	69
BstF5I	GGATG	7 cut(s)	33, 202, 352, 1040, 1516, 1576, 1793
BstFNI	CGCG	1 cut(s)	1763
BstH2I	RGCGCY	2 cut(s)	695, 1265
BstHHI	GCGC	5 cut(s)	283, 366, 694, 1264, 1765
BstKTI	GATC	3 cut(s)	268, 1558, 1942
BstMAI	GTCTC	7 cut(s)	128, 258, 308, 399, 946, 1073, 1324
BstMBI	GATC	3 cut(s)	265, 1555, 1939
BstMWI	GCNNNNNNNGC	5 cut(s)	328, 1217, 1270, 1373, 1840
BstNI	CCWGG	3 cut(s)	488, 1166, 1488
BstNSI	RCATGY	3 cut(s)	384, 1280, 1820
BstPI	GGTNACC	1 cut(s)	1160
BstSCI	CCNGG	3 cut(s)	486, 1164, 1486
BstSFI	CTRYAG	1 cut(s)	14
BstSLI	GKGCMC	4 cut(s)	855, 882, 1110, 1486
BstUI	CGCG	1 cut(s)	1763
BstV1I	GCAGC	1 cut(s)	911
BstV2I	GAAGAC	1 cut(s)	1689
BstX2I	RGATCY	2 cut(s)	265, 1939
BstYI	RGATCY	2 cut(s)	265, 1939
Bsu36I	CCTNAGG	1 cut(s)	70
BsuRI	GGCC	5 cut(s)	1015, 1108, 1198, 1220, 1273
BtsCI	GGATG	7 cut(s)	33, 202, 352, 1040, 1516, 1576, 1793
BtsI	GCAGTG	2 cut(s)	178, 1486
BtsIMutI	CAGTG	3 cut(s)	125, 178, 1486
BveI	ACCTGC	1 cut(s)	1245
Cac8I	GCNNGC	6 cut(s)	382, 690, 808, 1017, 1218, 1818
CaiI	CAGNNNCTG	1 cut(s)	1022
CciI	TCATGA	4 cut(s)	352, 795, 1060, 1522
CfoI	GCGC	5 cut(s)	283, 366, 694, 1264, 1765
Cfr13I	GGNCC	6 cut(s)	62, 814, 1106, 1107, 1197, 1219
CseI	GACGC	2 cut(s)	1008, 1769
CsiI	ACCWGGT	1 cut(s)	1486
Csp6I	GTAC	5 cut(s)	1425, 1443, 1644, 1836, 1978
CviQI	GTAC	5 cut(s)	1425, 1443, 1644, 1836, 1978
DdeI	CTNAG	8 cut(s)	41, 70, 257, 318, 398, 856, 1626, 1700
DinI	GGCGCC	1 cut(s)	1263
DpnI	GATC	3 cut(s)	267, 1557, 1941
DpnII	GATC	3 cut(s)	265, 1555, 1939
DraI	TTTAAA	1 cut(s)	10
DriI	GACNNNNNGTC	1 cut(s)	1765
Eam1104I	CTCTTC	1 cut(s)	1820
Eam1105I	GACNNNNNGTC	1 cut(s)	1765
EarI	CTCTTC	1 cut(s)	1820
Eco130I	CCWWGG	2 cut(s)	906, 1303
Eco24I	GRGCYC	2 cut(s)	435, 1110
Eco31I	GGTCTC	2 cut(s)	258, 1324
Eco32I	GATATC	1 cut(s)	544
Eco47I	GGWCC	2 cut(s)	62, 814
Eco57I	CTGAAG	1 cut(s)	101
Eco81I	CCTNAGG	1 cut(s)	70
Eco91I	GGTNACC	1 cut(s)	1160
EcoNI	CCTNNNNNAGG	1 cut(s)	69
EcoO109I	RGGNCCY	3 cut(s)	814, 1107, 1219
EcoO65I	GGTNACC	1 cut(s)	1160
EcoRII	CCWGG	3 cut(s)	486, 1164, 1486
EcoRV	GATATC	1 cut(s)	544
EcoT14I	CCWWGG	2 cut(s)	906, 1303
EcoT22I	ATGCAT	3 cut(s)	382, 892, 1818
EcoT38I	GRGCYC	2 cut(s)	435, 1110
EgeI	GGCGCC	1 cut(s)	1263
EheI	GGCGCC	1 cut(s)	1263
ErhI	CCWWGG	2 cut(s)	906, 1303
Esp3I	CGTCTC	1 cut(s)	399
FalI	AAGNNNNNCTT	4 cut(s)	890, 922, 1556, 1588
FaqI	GGGAC	1 cut(s)	1063
FauNDI	CATATG	1 cut(s)	190
FbaI	TGATCA	1 cut(s)	1555
FblI	GTMKAC	2 cut(s)	37, 1336
Fnu4HI	GCNGC	1 cut(s)	925
FokI	GGATG	7 cut(s)	40, 209, 359, 1027, 1503, 1563, 1800
FriOI	GRGCYC	2 cut(s)	435, 1110
Fsp4HI	GCNGC	1 cut(s)	925
FspBI	CTAG	1 cut(s)	1226
GlaI	GCGC	5 cut(s)	282, 365, 693, 1263, 1764
GluI	GCNGC	1 cut(s)	925
GsuI	CTGGAG	1 cut(s)	1525
HaeII	RGCGCY	2 cut(s)	695, 1265
HaeIII	GGCC	5 cut(s)	1015, 1108, 1198, 1220, 1273
HapII	CCGG	1 cut(s)	824
HgaI	GACGC	2 cut(s)	1008, 1769
HhaI	GCGC	5 cut(s)	283, 366, 694, 1264, 1765
Hin1I	GRCGYC	1 cut(s)	1262
Hin6I	GCGC	5 cut(s)	281, 364, 692, 1262, 1763
HinP1I	GCGC	5 cut(s)	281, 364, 692, 1262, 1763
HincII	GTYRAC	2 cut(s)	1300, 1417
HindII	GTYRAC	2 cut(s)	1300, 1417
HindIII	AAGCTT	2 cut(s)	329, 978
HpaI	GTTAAC	1 cut(s)	1417
HpaII	CCGG	1 cut(s)	824
HphI	GGTGA	5 cut(s)	670, 782, 1550, 1565, 1607
Hpy166II	GTNNAC	6 cut(s)	38, 853, 1300, 1337, 1417, 1484
Hpy188I	TCNGA	4 cut(s)	401, 607, 973, 1722
Hpy8I	GTNNAC	6 cut(s)	38, 853, 1300, 1337, 1417, 1484
HpyAV	CCTTC	5 cut(s)	125, 451, 571, 1150, 1159
HpyCH4III	ACNGT	2 cut(s)	425, 1637
HpyCH4IV	ACGT	3 cut(s)	392, 894, 1777
HpyF10VI	GCNNNNNNNGC	5 cut(s)	328, 1217, 1270, 1373, 1840
HpyF3I	CTNAG	8 cut(s)	41, 70, 257, 318, 398, 856, 1626, 1700
HpySE526I	ACGT	3 cut(s)	392, 894, 1777
Hsp92I	GRCGYC	1 cut(s)	1262
HspAI	GCGC	5 cut(s)	281, 364, 692, 1262, 1763
KasI	GGCGCC	1 cut(s)	1261
Ksp22I	TGATCA	1 cut(s)	1555
KspAI	GTTAAC	1 cut(s)	1417
Kzo9I	GATC	3 cut(s)	265, 1555, 1939
LmnI	GCTCC	2 cut(s)	1372, 1544
Lsp1109I	GCAGC	1 cut(s)	911
LweI	GCATC	6 cut(s)	18, 268, 337, 367, 626, 1525
MabI	ACCWGGT	1 cut(s)	1486
MaeI	CTAG	1 cut(s)	1226
MaeII	ACGT	3 cut(s)	392, 894, 1777
MaeIII	GTNAC	7 cut(s)	75, 98, 425, 658, 1036, 1160, 1767
MalI	GATC	3 cut(s)	267, 1557, 1941
MbiI	CCGCTC	1 cut(s)	1528
MboI	GATC	3 cut(s)	265, 1555, 1939
MboII	GAAGA	9 cut(s)	757, 1164, 1236, 1662, 1694, 1837, 1868, 1901, 1984
MfeI	CAATTG	1 cut(s)	713
MflI	RGATCY	2 cut(s)	265, 1939
MhlI	GDGCHC	5 cut(s)	435, 855, 882, 1110, 1486
MluCI	AATT	5 cut(s)	148, 309, 713, 846, 1187
Mly113I	GGCGCC	1 cut(s)	1262
MlyI	GAGTC	6 cut(s)	43, 52, 396, 524, 590, 650
Mph1103I	ATGCAT	3 cut(s)	382, 892, 1818
MseI	TTAA	9 cut(s)	9, 327, 438, 897, 1068, 1113, 1268, 1416, 1467
MslI	CAYNNNNRTG	7 cut(s)	191, 885, 1353, 1521, 1581, 1786, 1811
MspI	CCGG	1 cut(s)	824
MspR9I	CCNGG	3 cut(s)	488, 1166, 1488
MunI	CAATTG	1 cut(s)	713
MvaI	CCWGG	3 cut(s)	488, 1166, 1488
MvnI	CGCG	1 cut(s)	1763
MwoI	GCNNNNNNNGC	5 cut(s)	328, 1217, 1270, 1373, 1840
NarI	GGCGCC	1 cut(s)	1262
NdeI	CATATG	1 cut(s)	190
NdeII	GATC	3 cut(s)	265, 1555, 1939
NlaIV	GGNNCC	7 cut(s)	816, 1108, 1109, 1221, 1263, 1309, 1540
NmeAIII	GCCGAG	4 cut(s)	57, 66, 1165, 1237
NmuCI	GTSAC	2 cut(s)	658, 1767
NsiI	ATGCAT	3 cut(s)	382, 892, 1818
NspI	RCATGY	3 cut(s)	384, 1280, 1820
OliI	CACNNNNGTG	1 cut(s)	191
PaeI	GCATGC	2 cut(s)	384, 1820
PagI	TCATGA	4 cut(s)	352, 795, 1060, 1522
PfeI	GAWTC	7 cut(s)	82, 775, 872, 902, 932, 1712, 1918
PkrI	GCNGC	1 cut(s)	926
PleI	GAGTC	6 cut(s)	42, 51, 396, 523, 589, 649
PluTI	GGCGCC	1 cut(s)	1265
PpsI	GAGTC	6 cut(s)	42, 51, 396, 523, 589, 649
PpuMI	RGGWCCY	1 cut(s)	814
Psp5II	RGGWCCY	1 cut(s)	814
Psp6I	CCWGG	3 cut(s)	486, 1164, 1486
PspEI	GGTNACC	1 cut(s)	1160
PspGI	CCWGG	3 cut(s)	486, 1164, 1486
PspN4I	GGNNCC	7 cut(s)	816, 1108, 1109, 1221, 1263, 1309, 1540
PspOMI	GGGCCC	1 cut(s)	1106
PspPI	GGNCC	6 cut(s)	62, 814, 1106, 1107, 1197, 1219
PspPPI	RGGWCCY	1 cut(s)	814
PstI	CTGCAG	1 cut(s)	18
PstNI	CAGNNNCTG	1 cut(s)	1022
PsuI	RGATCY	2 cut(s)	265, 1939
RsaI	GTAC	5 cut(s)	1426, 1444, 1645, 1837, 1979
RsaNI	GTAC	5 cut(s)	1425, 1443, 1644, 1836, 1978
RseI	CAYNNNNRTG	7 cut(s)	191, 885, 1353, 1521, 1581, 1786, 1811
SaqAI	TTAA	9 cut(s)	9, 327, 438, 897, 1068, 1113, 1268, 1416, 1467
SatI	GCNGC	1 cut(s)	925
Sau3AI	GATC	3 cut(s)	265, 1555, 1939
Sau96I	GGNCC	6 cut(s)	62, 814, 1106, 1107, 1197, 1219
ScaI	AGTACT	1 cut(s)	1979
SchI	GAGTC	6 cut(s)	43, 52, 396, 524, 590, 650
ScrFI	CCNGG	3 cut(s)	488, 1166, 1488
SduI	GDGCHC	5 cut(s)	435, 855, 882, 1110, 1486
SexAI	ACCWGGT	1 cut(s)	1486
SfaNI	GCATC	6 cut(s)	18, 268, 337, 367, 626, 1525
SfcI	CTRYAG	1 cut(s)	14
SfoI	GGCGCC	1 cut(s)	1263
SinI	GGWCC	2 cut(s)	62, 814
SmiMI	CAYNNNNRTG	7 cut(s)	191, 885, 1353, 1521, 1581, 1786, 1811
SmlI	CTYRAG	3 cut(s)	404, 551, 1134
SmoI	CTYRAG	3 cut(s)	404, 551, 1134
SphI	GCATGC	2 cut(s)	384, 1820
Sse9I	AATT	5 cut(s)	148, 309, 713, 846, 1187
SsiI	CCGC	3 cut(s)	512, 1528, 1785
SspDI	GGCGCC	1 cut(s)	1261
SspMI	CTAG	1 cut(s)	1226
StyD4I	CCNGG	3 cut(s)	486, 1164, 1486
StyI	CCWWGG	2 cut(s)	906, 1303
TaaI	ACNGT	2 cut(s)	425, 1637
TaiI	ACGT	3 cut(s)	395, 897, 1780
TaqI	TCGA	2 cut(s)	788, 913
TasI	AATT	5 cut(s)	148, 309, 713, 846, 1187
TatI	WGTACW	1 cut(s)	1977
TfiI	GAWTC	7 cut(s)	82, 775, 872, 902, 932, 1712, 1918
Tru1I	TTAA	9 cut(s)	9, 327, 438, 897, 1068, 1113, 1268, 1416, 1467
Tru9I	TTAA	9 cut(s)	9, 327, 438, 897, 1068, 1113, 1268, 1416, 1467
TscAI	CASTG	3 cut(s)	125, 185, 1486
TseFI	GTSAC	2 cut(s)	658, 1767
TseI	GCWGC	1 cut(s)	924
Tsp45I	GTSAC	2 cut(s)	658, 1767
TspDTI	ATGAA	6 cut(s)	753, 784, 1077, 1142, 1740, 1770
TspGWI	ACGGA	2 cut(s)	94, 1442
TspRI	CASTG	3 cut(s)	125, 185, 1486
VneI	GTGCAC	2 cut(s)	851, 1482
VpaK11BI	GGWCC	2 cut(s)	62, 814
XagI	CCTNNNNNAGG	1 cut(s)	69
XapI	RAATTY	2 cut(s)	309, 1187
XceI	RCATGY	3 cut(s)	384, 1280, 1820
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1100
XmiI	GTMKAC	2 cut(s)	37, 1336
XspI	CTAG	1 cut(s)	1226
ZrmI	AGTACT	1 cut(s)	1979
Zsp2I	ATGCAT	3 cut(s)	382, 892, 1818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.