Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14400 |
| fragaria_vesca | FvH4_3g16490 FvH4_3g16490 FvH4_3g16490 FvH4_3g16490 |
| malus_domestica | MD05G1209600.v1.1 MD10G1195900.v1.1 |
| prunus_persica | Prupe.4G147900_v2.0.a1 |
| pyrus_communis | pycom05g19560 pycom10g16950 |
| rosa_chinensis | RchiOBHm_Chr5g0027541 |
| rosa_laevigata | RLG00000033025 |
| rosa_multiflora | Rmu_co8326735.1_g000001 Rmu_co8467017.1_g000001 Rmu_sc0004493.1_g000008 Rmu_sc0007802.1_g000039 Rmu_sc0011056.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00052000 Rroxscaffold_1G00052020 |
| rosa_rugosa | Rorug05G0099400 Rorug05G0099500 Rorug05G0099600 |
| rosa_samantha | Rh5AG193700 Rh5BG191700 Rh5CG211900 Rh5DG193400 Rh5DG193600 |
| rosa_wichuraiana | Rw5G017660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1493 |
| Acc36I | ACCTGC | 1 cut(s) | 1493 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2006 |
| AccBSI | CCGCTC | 4 cut(s) | 411, 1297, 2328, 3027 |
| AccI | GTMKAC | 3 cut(s) | 1079, 1129, 1429 |
| AccII | CGCG | 3 cut(s) | 71, 1305, 1951 |
| AccIII | TCCGGA | 1 cut(s) | 1354 |
| AclWI | GGATC | 5 cut(s) | 15, 653, 1365, 1940, 1953 |
| AcoI | YGGCCR | 4 cut(s) | 82, 1750, 1952, 3022 |
| AcsI | RAATTY | 5 cut(s) | 1000, 2332, 2637, 3053, 3123 |
| AcuI | CTGAAG | 2 cut(s) | 2240, 3129 |
| AcvI | CACGTG | 1 cut(s) | 2618 |
| AcyI | GRCGYC | 1 cut(s) | 1059 |
| AfaI | GTAC | 9 cut(s) | 602, 727, 1763, 1866, 1931, 1975, 2134, 2917, 2956 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 1166, 1354, 1491, 2006, 2043, 2142, 2240, 2307 |
| AflII | CTTAAG | 1 cut(s) | 1847 |
| AflIII | ACRYGT | 1 cut(s) | 315 |
| AjnI | CCWGG | 2 cut(s) | 1617, 2781 |
| Alw21I | GWGCWC | 1 cut(s) | 2617 |
| Alw26I | GTCTC | 5 cut(s) | 578, 943, 1400, 2077, 2272 |
| AlwI | GGATC | 5 cut(s) | 15, 653, 1365, 1940, 1953 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 368, 2006 |
| Ama87I | CYCGRG | 1 cut(s) | 1397 |
| Aor13HI | TCCGGA | 1 cut(s) | 1354 |
| AoxI | GGCC | 8 cut(s) | 82, 1090, 1153, 1542, 1750, 1952, 2144, 3022 |
| ApeKI | GCWGC | 9 cut(s) | 13, 389, 989, 1036, 1120, 1504, 1793, 2055, 2858 |
| ApoI | RAATTY | 5 cut(s) | 1000, 2332, 2637, 3053, 3123 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1416, 2481 |
| AspLEI | GCGC | 5 cut(s) | 73, 1305, 1375, 1458, 3333 |
| AspS9I | GGNCC | 3 cut(s) | 37, 1090, 1344 |
| AsuHPI | GGTGA | 5 cut(s) | 482, 1213, 1597, 1633, 1989 |
| AsuNHI | GCTAGC | 1 cut(s) | 2156 |
| AvaI | CYCGRG | 1 cut(s) | 1397 |
| AvaII | GGWCC | 2 cut(s) | 37, 1344 |
| AxyI | CCTNAGG | 1 cut(s) | 2395 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1965, 1998 |
| BalI | TGGCCA | 1 cut(s) | 1752 |
| BamHI | GGATCC | 1 cut(s) | 1945 |
| BauI | CACGAG | 1 cut(s) | 2901 |
| BbrPI | CACGTG | 1 cut(s) | 2618 |
| BbsI | GAAGAC | 2 cut(s) | 160, 3008 |
| Bbv12I | GWGCWC | 1 cut(s) | 2617 |
| BbvI | GCAGC | 8 cut(s) | 401, 976, 1048, 1132, 1491, 1805, 2042, 2870 |
| BccI | CCATC | 8 cut(s) | 502, 661, 1003, 1062, 1081, 1742, 2345, 2762 |
| BceAI | ACGGC | 3 cut(s) | 1543, 1564, 1584 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 995, 1028, 1029, 1062 |
| BciT130I | CCWGG | 2 cut(s) | 1619, 2783 |
| BclI | TGATCA | 3 cut(s) | 426, 759, 3264 |
| BcoDI | GTCTC | 5 cut(s) | 578, 943, 1400, 2077, 2272 |
| BfaI | CTAG | 2 cut(s) | 2157, 2862 |
| BfmI | CTRYAG | 2 cut(s) | 237, 2760 |
| BfrI | CTTAAG | 1 cut(s) | 1847 |
| BfuAI | ACCTGC | 1 cut(s) | 1493 |
| BglII | AGATCT | 2 cut(s) | 87, 2414 |
| Bme1390I | CCNGG | 2 cut(s) | 1619, 2783 |
| Bme18I | GGWCC | 2 cut(s) | 37, 1344 |
| BmeT110I | CYCGRG | 1 cut(s) | 1397 |
| BmgT120I | GGNCC | 3 cut(s) | 37, 1090, 1344 |
| BmiI | GGNNCC | 3 cut(s) | 1346, 1947, 3229 |
| BmrFI | CCNGG | 2 cut(s) | 1619, 2783 |
| BmtI | GCTAGC | 1 cut(s) | 2160 |
| BpiI | GAAGAC | 2 cut(s) | 160, 3008 |
| BpmI | CTGGAG | 3 cut(s) | 61, 1196, 1346 |
| BpuEI | CTTGAG | 2 cut(s) | 419, 3113 |
| BsaAI | YACGTR | 2 cut(s) | 250, 2618 |
| BsaHI | GRCGYC | 1 cut(s) | 1059 |
| BsaI | GGTCTC | 1 cut(s) | 578 |
| BsaJI | CCNNGG | 5 cut(s) | 117, 641, 1180, 1949, 2306 |
| BsaWI | WCCGGW | 1 cut(s) | 1354 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 504, 534 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 1166, 1354, 1491, 2006, 2043, 2142, 2240, 2307 |
| Bse118I | RCCGGY | 1 cut(s) | 896 |
| Bse1I | ACTGG | 4 cut(s) | 362, 1213, 2635, 2923 |
| Bse21I | CCTNAGG | 1 cut(s) | 2395 |
| Bse3DI | GCAATG | 9 cut(s) | 282, 291, 885, 1519, 1537, 1564, 1607, 1715, 2065 |
| BseAI | TCCGGA | 1 cut(s) | 1354 |
| BseBI | CCWGG | 2 cut(s) | 1619, 2783 |
| BseDI | CCNNGG | 5 cut(s) | 117, 641, 1180, 1949, 2306 |
| BseGI | GGATG | 8 cut(s) | 1294, 1375, 1753, 2038, 2115, 2316, 2680, 3178 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 1166, 1354, 1491, 2006, 2043, 2142, 2240, 2307 |
| BseMI | GCAATG | 9 cut(s) | 282, 291, 885, 1519, 1537, 1564, 1607, 1715, 2065 |
| BseMII | CTCAG | 6 cut(s) | 1124, 1340, 1375, 1728, 2283, 2700 |
| BseNI | ACTGG | 4 cut(s) | 362, 1213, 2635, 2923 |
| BseRI | GAGGAG | 4 cut(s) | 163, 528, 1224, 1916 |
| BseXI | GCAGC | 8 cut(s) | 401, 976, 1048, 1132, 1491, 1805, 2042, 2870 |
| BseYI | CCCAGC | 2 cut(s) | 298, 2975 |
| BsgI | GTGCAG | 3 cut(s) | 637, 975, 1055 |
| Bsh1236I | CGCG | 3 cut(s) | 71, 1305, 1951 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1429 |
| BshFI | GGCC | 8 cut(s) | 84, 1092, 1155, 1544, 1752, 1954, 2146, 3024 |
| BsiEI | CGRYCG | 1 cut(s) | 1429 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2617 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1397 |
| BsiSI | CCGG | 2 cut(s) | 897, 1355 |
| BslFI | GGGAC | 3 cut(s) | 1296, 1330, 3332 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 1166, 1354, 1491, 2006, 2043, 2142, 2240, 2307 |
| BsmAI | GTCTC | 5 cut(s) | 578, 943, 1400, 2077, 2272 |
| BsmFI | GGGAC | 3 cut(s) | 1296, 1330, 3332 |
| BsmI | GAATGC | 5 cut(s) | 423, 1320, 1984, 3069, 3333 |
| BsnI | GGCC | 8 cut(s) | 84, 1092, 1155, 1544, 1752, 1954, 2146, 3024 |
| Bso31I | GGTCTC | 1 cut(s) | 578 |
| BsoBI | CYCGRG | 1 cut(s) | 1397 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2617 |
| Bsp13I | TCCGGA | 1 cut(s) | 1354 |
| Bsp1407I | TGTACA | 1 cut(s) | 1929 |
| Bsp19I | CCATGG | 1 cut(s) | 641 |
| BspANI | GGCC | 8 cut(s) | 84, 1092, 1155, 1544, 1752, 1954, 2146, 3024 |
| BspCNI | CTCAG | 6 cut(s) | 1125, 1341, 1374, 1729, 2282, 2699 |
| BspEI | TCCGGA | 1 cut(s) | 1354 |
| BspFNI | CGCG | 3 cut(s) | 71, 1305, 1951 |
| BspHI | TCATGA | 3 cut(s) | 1444, 1497, 2185 |
| BspLI | GGNNCC | 3 cut(s) | 1346, 1947, 3229 |
| BspMI | ACCTGC | 1 cut(s) | 1493 |
| BspOI | GCTAGC | 1 cut(s) | 2160 |
| BspPI | GGATC | 5 cut(s) | 15, 653, 1365, 1940, 1953 |
| BspQI | GCTCTTC | 1 cut(s) | 2235 |
| BspTI | CTTAAG | 1 cut(s) | 1847 |
| BspTNI | GGTCTC | 1 cut(s) | 578 |
| BsrBI | CCGCTC | 4 cut(s) | 411, 1297, 2328, 3027 |
| BsrDI | GCAATG | 9 cut(s) | 282, 291, 885, 1519, 1537, 1564, 1607, 1715, 2065 |
| BsrFI | RCCGGY | 1 cut(s) | 896 |
| BsrGI | TGTACA | 1 cut(s) | 1929 |
| BsrI | ACTGG | 4 cut(s) | 362, 1213, 2635, 2923 |
| BssAI | RCCGGY | 1 cut(s) | 896 |
| BssECI | CCNNGG | 5 cut(s) | 117, 641, 1180, 1949, 2306 |
| BssNI | GRCGYC | 1 cut(s) | 1059 |
| BssSI | CACGAG | 1 cut(s) | 2901 |
| BssT1I | CCWWGG | 2 cut(s) | 117, 641 |
| Bst2BI | CACGAG | 1 cut(s) | 2901 |
| Bst2UI | CCWGG | 2 cut(s) | 1619, 2783 |
| Bst4CI | ACNGT | 7 cut(s) | 238, 470, 1310, 1582, 2377, 2777, 2879 |
| Bst6I | CTCTTC | 2 cut(s) | 1288, 2235 |
| BstACI | GRCGYC | 1 cut(s) | 1059 |
| BstAFI | CTTAAG | 1 cut(s) | 1847 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 281, 1191, 1339, 3086 |
| BstAUI | TGTACA | 1 cut(s) | 1929 |
| BstBAI | YACGTR | 2 cut(s) | 250, 2618 |
| BstC8I | GCNNGC | 6 cut(s) | 1094, 1157, 1474, 2148, 2158, 2973 |
| BstDEI | CTNAG | 8 cut(s) | 1133, 1349, 1361, 1737, 2269, 2395, 2686, 3322 |
| BstDSI | CCRYGG | 3 cut(s) | 641, 1949, 2306 |
| BstF5I | GGATG | 8 cut(s) | 1294, 1375, 1753, 2038, 2115, 2316, 2680, 3178 |
| BstFNI | CGCG | 3 cut(s) | 71, 1305, 1951 |
| BstHHI | GCGC | 5 cut(s) | 73, 1305, 1375, 1458, 3333 |
| BstMAI | GTCTC | 2 cut(s) | 578, 943 |
| BstMCI | CGRYCG | 1 cut(s) | 1429 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 281, 902, 1182, 1191, 1339, 1501, 2162, 3086 |
| BstNI | CCWGG | 2 cut(s) | 1619, 2783 |
| BstNSI | RCATGY | 1 cut(s) | 319 |
| BstSCI | CCNGG | 2 cut(s) | 1617, 2781 |
| BstSFI | CTRYAG | 2 cut(s) | 237, 2760 |
| BstUI | CGCG | 3 cut(s) | 71, 1305, 1951 |
| BstV1I | GCAGC | 8 cut(s) | 401, 976, 1048, 1132, 1491, 1805, 2042, 2870 |
| BstV2I | GAAGAC | 2 cut(s) | 160, 3008 |
| BstX2I | RGATCY | 5 cut(s) | 87, 645, 1357, 1945, 2414 |
| BstYI | RGATCY | 5 cut(s) | 87, 645, 1357, 1945, 2414 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2395 |
| BsuRI | GGCC | 8 cut(s) | 84, 1092, 1155, 1544, 1752, 1954, 2146, 3024 |
| BtgI | CCRYGG | 3 cut(s) | 641, 1949, 2306 |
| BtgZI | GCGATG | 2 cut(s) | 52, 1081 |
| BtsCI | GGATG | 8 cut(s) | 1294, 1375, 1753, 2038, 2115, 2316, 2680, 3178 |
| BtsI | GCAGTG | 2 cut(s) | 625, 2160 |
| BtsIMutI | CAGTG | 5 cut(s) | 441, 625, 951, 1220, 2160 |
| BveI | ACCTGC | 1 cut(s) | 1493 |
| Cac8I | GCNNGC | 6 cut(s) | 1094, 1157, 1474, 2148, 2158, 2973 |
| CaiI | CAGNNNCTG | 2 cut(s) | 368, 2006 |
| CciI | TCATGA | 3 cut(s) | 1444, 1497, 2185 |
| CfoI | GCGC | 5 cut(s) | 73, 1305, 1375, 1458, 3333 |
| Cfr10I | RCCGGY | 1 cut(s) | 896 |
| Cfr13I | GGNCC | 3 cut(s) | 37, 1090, 1344 |
| Cfr42I | CCGCGG | 1 cut(s) | 1952 |
| CseI | GACGC | 5 cut(s) | 1048, 1195, 1448, 1518, 1721 |
| Csp6I | GTAC | 9 cut(s) | 601, 726, 1762, 1865, 1930, 1974, 2133, 2916, 2955 |
| CviQI | GTAC | 9 cut(s) | 601, 726, 1762, 1865, 1930, 1974, 2133, 2916, 2955 |
| DdeI | CTNAG | 8 cut(s) | 1133, 1349, 1361, 1737, 2269, 2395, 2686, 3322 |
| EaeI | YGGCCR | 4 cut(s) | 82, 1750, 1952, 3022 |
| Eam1104I | CTCTTC | 2 cut(s) | 1288, 2235 |
| EarI | CTCTTC | 2 cut(s) | 1288, 2235 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 2 cut(s) | 117, 641 |
| Eco31I | GGTCTC | 1 cut(s) | 578 |
| Eco47I | GGWCC | 2 cut(s) | 37, 1344 |
| Eco57I | CTGAAG | 2 cut(s) | 2240, 3129 |
| Eco72I | CACGTG | 1 cut(s) | 2618 |
| Eco81I | CCTNAGG | 1 cut(s) | 2395 |
| Eco88I | CYCGRG | 1 cut(s) | 1397 |
| EcoO109I | RGGNCCY | 1 cut(s) | 37 |
| EcoRII | CCWGG | 2 cut(s) | 1617, 2781 |
| EcoT14I | CCWWGG | 2 cut(s) | 117, 641 |
| EcoT22I | ATGCAT | 2 cut(s) | 2023, 3071 |
| ErhI | CCWWGG | 2 cut(s) | 117, 641 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2404, 2436 |
| FaqI | GGGAC | 3 cut(s) | 1296, 1330, 3332 |
| FauI | CCCGC | 2 cut(s) | 787, 3310 |
| FbaI | TGATCA | 3 cut(s) | 426, 759, 3264 |
| FblI | GTMKAC | 3 cut(s) | 1079, 1129, 1429 |
| FokI | GGATG | 8 cut(s) | 1301, 1382, 1760, 2045, 2102, 2323, 2687, 3185 |
| FspBI | CTAG | 2 cut(s) | 2157, 2862 |
| GlaI | GCGC | 5 cut(s) | 72, 1304, 1374, 1457, 3332 |
| GsaI | CCCAGC | 2 cut(s) | 302, 2979 |
| GsuI | CTGGAG | 3 cut(s) | 61, 1196, 1346 |
| HaeIII | GGCC | 8 cut(s) | 84, 1092, 1155, 1544, 1752, 1954, 2146, 3024 |
| HapII | CCGG | 2 cut(s) | 897, 1355 |
| HgaI | GACGC | 5 cut(s) | 1048, 1195, 1448, 1518, 1721 |
| HhaI | GCGC | 5 cut(s) | 73, 1305, 1375, 1458, 3333 |
| Hin1I | GRCGYC | 1 cut(s) | 1059 |
| Hin6I | GCGC | 5 cut(s) | 71, 1303, 1373, 1456, 3331 |
| HinP1I | GCGC | 5 cut(s) | 71, 1303, 1373, 1456, 3331 |
| HincII | GTYRAC | 2 cut(s) | 1080, 1430 |
| HindII | GTYRAC | 2 cut(s) | 1080, 1430 |
| HindIII | AAGCTT | 2 cut(s) | 528, 1964 |
| HpaII | CCGG | 2 cut(s) | 897, 1355 |
| HphI | GGTGA | 5 cut(s) | 482, 1213, 1597, 1633, 1989 |
| Hpy166II | GTNNAC | 8 cut(s) | 726, 1080, 1130, 1430, 1865, 2113, 2380, 2446 |
| Hpy188I | TCNGA | 8 cut(s) | 507, 1006, 1050, 1140, 1288, 2104, 3004, 3217 |
| Hpy8I | GTNNAC | 8 cut(s) | 726, 1080, 1130, 1430, 1865, 2113, 2380, 2446 |
| Hpy99I | CGWCG | 5 cut(s) | 1064, 1078, 1081, 1084, 1512 |
| HpyCH4III | ACNGT | 7 cut(s) | 238, 470, 1310, 1582, 2377, 2777, 2879 |
| HpyCH4IV | ACGT | 4 cut(s) | 249, 1082, 1461, 2617 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 281, 902, 1182, 1191, 1339, 1501, 2162, 3086 |
| HpyF3I | CTNAG | 8 cut(s) | 1133, 1349, 1361, 1737, 2269, 2395, 2686, 3322 |
| HpySE526I | ACGT | 4 cut(s) | 249, 1082, 1461, 2617 |
| Hsp92I | GRCGYC | 1 cut(s) | 1059 |
| HspAI | GCGC | 5 cut(s) | 71, 1303, 1373, 1456, 3331 |
| Kpn2I | TCCGGA | 1 cut(s) | 1354 |
| Ksp22I | TGATCA | 3 cut(s) | 426, 759, 3264 |
| KspI | CCGCGG | 1 cut(s) | 1952 |
| LguI | GCTCTTC | 1 cut(s) | 2235 |
| LmnI | GCTCC | 4 cut(s) | 1294, 1389, 1604, 1828 |
| Lsp1109I | GCAGC | 8 cut(s) | 401, 976, 1048, 1132, 1491, 1805, 2042, 2870 |
| MaeI | CTAG | 2 cut(s) | 2157, 2862 |
| MaeII | ACGT | 4 cut(s) | 249, 1082, 1461, 2617 |
| MaeIII | GTNAC | 6 cut(s) | 250, 924, 1170, 1277, 2009, 2771 |
| MbiI | CCGCTC | 4 cut(s) | 411, 1297, 2328, 3027 |
| MfeI | CAATTG | 1 cut(s) | 1103 |
| MflI | RGATCY | 5 cut(s) | 87, 645, 1357, 1945, 2414 |
| MhlI | GDGCHC | 1 cut(s) | 2617 |
| MlsI | TGGCCA | 1 cut(s) | 1752 |
| MluNI | TGGCCA | 1 cut(s) | 1752 |
| MlyI | GAGTC | 8 cut(s) | 145, 283, 1135, 1144, 1274, 1360, 2012, 2678 |
| MmeI | TCCRAC | 2 cut(s) | 1029, 3205 |
| Mox20I | TGGCCA | 1 cut(s) | 1752 |
| Mph1103I | ATGCAT | 2 cut(s) | 2023, 3071 |
| MroI | TCCGGA | 1 cut(s) | 1354 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1416, 2481 |
| MscI | TGGCCA | 1 cut(s) | 1752 |
| MslI | CAYNNNNRTG | 3 cut(s) | 434, 771, 2016 |
| Msp20I | TGGCCA | 1 cut(s) | 1752 |
| MspA1I | CMGCKG | 6 cut(s) | 81, 486, 989, 1951, 2273, 2975 |
| MspCI | CTTAAG | 1 cut(s) | 1847 |
| MspI | CCGG | 2 cut(s) | 897, 1355 |
| MspR9I | CCNGG | 2 cut(s) | 1619, 2783 |
| MunI | CAATTG | 1 cut(s) | 1103 |
| Mva1269I | GAATGC | 5 cut(s) | 423, 1320, 1984, 3069, 3333 |
| MvaI | CCWGG | 2 cut(s) | 1619, 2783 |
| MvnI | CGCG | 3 cut(s) | 71, 1305, 1951 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 281, 902, 1182, 1191, 1339, 1501, 2162, 3086 |
| NcoI | CCATGG | 1 cut(s) | 641 |
| NheI | GCTAGC | 1 cut(s) | 2156 |
| NlaIV | GGNNCC | 3 cut(s) | 1346, 1947, 3229 |
| NmeAIII | GCCGAG | 2 cut(s) | 1149, 1161 |
| NmuCI | GTSAC | 3 cut(s) | 250, 1277, 2009 |
| NsiI | ATGCAT | 2 cut(s) | 2023, 3071 |
| NspI | RCATGY | 1 cut(s) | 319 |
| PagI | TCATGA | 3 cut(s) | 1444, 1497, 2185 |
| PaqCI | CACCTGC | 1 cut(s) | 1493 |
| PciI | ACATGT | 1 cut(s) | 315 |
| PciSI | GCTCTTC | 1 cut(s) | 2235 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1079, 1426 |
| PctI | GAATGC | 5 cut(s) | 423, 1320, 1984, 3069, 3333 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1416, 2481 |
| PfeI | GAWTC | 9 cut(s) | 1646, 2063, 2386, 2452, 2522, 2650, 2936, 2999, 3062 |
| PflFI | GACNNNGTC | 1 cut(s) | 3323 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2006 |
| PleI | GAGTC | 8 cut(s) | 145, 283, 1134, 1143, 1274, 1359, 2011, 2678 |
| PmaCI | CACGTG | 1 cut(s) | 2618 |
| PmlI | CACGTG | 1 cut(s) | 2618 |
| PpsI | GAGTC | 2 cut(s) | 145, 283 |
| Ppu21I | YACGTR | 2 cut(s) | 250, 2618 |
| PpuMI | RGGWCCY | 1 cut(s) | 37 |
| PscI | ACATGT | 1 cut(s) | 315 |
| Psp5II | RGGWCCY | 1 cut(s) | 37 |
| Psp6I | CCWGG | 2 cut(s) | 1617, 2781 |
| PspCI | CACGTG | 1 cut(s) | 2618 |
| PspFI | CCCAGC | 2 cut(s) | 298, 2975 |
| PspGI | CCWGG | 2 cut(s) | 1617, 2781 |
| PspN4I | GGNNCC | 3 cut(s) | 1346, 1947, 3229 |
| PspPI | GGNCC | 3 cut(s) | 37, 1090, 1344 |
| PspPPI | RGGWCCY | 1 cut(s) | 37 |
| PstNI | CAGNNNCTG | 2 cut(s) | 368, 2006 |
| PsuI | RGATCY | 5 cut(s) | 87, 645, 1357, 1945, 2414 |
| PsyI | GACNNNGTC | 1 cut(s) | 3323 |
| PvuII | CAGCTG | 4 cut(s) | 486, 989, 2273, 2975 |
| RsaI | GTAC | 9 cut(s) | 602, 727, 1763, 1866, 1931, 1975, 2134, 2917, 2956 |
| RsaNI | GTAC | 9 cut(s) | 601, 726, 1762, 1865, 1930, 1974, 2133, 2916, 2955 |
| RseI | CAYNNNNRTG | 3 cut(s) | 434, 771, 2016 |
| SacII | CCGCGG | 1 cut(s) | 1952 |
| SalI | GTCGAC | 2 cut(s) | 1078, 1428 |
| SapI | GCTCTTC | 1 cut(s) | 2235 |
| Sau96I | GGNCC | 3 cut(s) | 37, 1090, 1344 |
| SchI | GAGTC | 8 cut(s) | 145, 283, 1135, 1144, 1274, 1360, 2012, 2678 |
| ScrFI | CCNGG | 2 cut(s) | 1619, 2783 |
| SduI | GDGCHC | 1 cut(s) | 2617 |
| SfcI | CTRYAG | 2 cut(s) | 237, 2760 |
| Sfr303I | CCGCGG | 1 cut(s) | 1952 |
| SgrBI | CCGCGG | 1 cut(s) | 1952 |
| SgrDI | CGTCGACG | 1 cut(s) | 1078 |
| SinI | GGWCC | 2 cut(s) | 37, 1344 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 434, 771, 2016 |
| SmlI | CTYRAG | 3 cut(s) | 398, 1847, 3128 |
| SmoI | CTYRAG | 3 cut(s) | 398, 1847, 3128 |
| SspMI | CTAG | 2 cut(s) | 2157, 2862 |
| StyD4I | CCNGG | 2 cut(s) | 1617, 2781 |
| StyI | CCWWGG | 2 cut(s) | 117, 641 |
| TaaI | ACNGT | 7 cut(s) | 238, 470, 1310, 1582, 2377, 2777, 2879 |
| TaiI | ACGT | 4 cut(s) | 252, 1085, 1464, 2620 |
| TaqI | TCGA | 2 cut(s) | 1079, 1429 |
| TatI | WGTACW | 5 cut(s) | 600, 725, 1761, 1864, 1929 |
| TauI | GCSGC | 7 cut(s) | 84, 414, 908, 1059, 1162, 1954, 3027 |
| TfiI | GAWTC | 9 cut(s) | 1646, 2063, 2386, 2452, 2522, 2650, 2936, 2999, 3062 |
| TscAI | CASTG | 5 cut(s) | 441, 625, 958, 1220, 2167 |
| TseFI | GTSAC | 3 cut(s) | 250, 1277, 2009 |
| TseI | GCWGC | 9 cut(s) | 13, 389, 989, 1036, 1120, 1504, 1793, 2055, 2858 |
| Tsp45I | GTSAC | 3 cut(s) | 250, 1277, 2009 |
| TspGWI | ACGGA | 3 cut(s) | 1402, 1813, 2323 |
| TspRI | CASTG | 5 cut(s) | 441, 625, 958, 1220, 2167 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3323 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2006 |
| Vha464I | CTTAAG | 1 cut(s) | 1847 |
| VpaK11BI | GGWCC | 2 cut(s) | 37, 1344 |
| XapI | RAATTY | 5 cut(s) | 1000, 2332, 2637, 3053, 3123 |
| XceI | RCATGY | 1 cut(s) | 319 |
| XmiI | GTMKAC | 3 cut(s) | 1079, 1129, 1429 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1416, 2481 |
| XspI | CTAG | 2 cut(s) | 2157, 2862 |
| Zsp2I | ATGCAT | 2 cut(s) | 2023, 3071 |