Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0005652

Physical Location & Seq

Genomic Coordinates Reverse (-)

10412351 .. 10417981

Gene Structure 5631 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g16490.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGGGCGTGCAGTTTCAATTGCAGATGAGTTGGCAGCCGAGTCTACTGAGTCAGAAACGGAAGACAGGCCCGCCTCTAGGGTTGAAGAACCTCGGCAACTCTTGCTACCTCAACAGCGTCCTCCAGTGCCTCACCTACACCCCTCCCCTCGCCAATTTCTGCCTTCGAAACCAGCACTCCTCCCTCTGTGACTCTAACGATAAGGAGAGGAAGCGCGAGTGTCCGTTTTGCATGCTGGAGAGGAGGATAGTCAGGTCTCTCAGTGTGGATCTCAGTCTAGATGCGCCCGCCAAGATTCGGAGCTGTCTGAATATTTTCGCCGACCATTTTCGCCACGGCCGGCAGGAAGACGCGCATGAGTTCCTCCGTTACGTTATTGATGCTTGCCACAACACTTGCCTCCGCTTGAAGAAGCTCCGGCGCAACATCACCGGAAATGGTTTGTCCAACGGCAATGGCCATGCCAACGGGAATGGTCACTCCAACGTTGTTACGGTGGCTCCGTCGTCCACGGTGGTGATGGAGATATTCGGGGGAGCTTTACAGAGCCAGGTGAAGTGTTTGTCCTGTGGCAAGGAGTCTAATAAGGTTGATGAGATAATGGATATTAGTCTGGATGTTTTGCATAGTAATTCGCTTAAAGACGCTTTGCAAAAGTTCTTCCAGTCTGAGCTTTTGGATGGCCAAAACAAGTACAAGTGTGAAAGATGTAACAAATTAGTGGCAGCTAAGAAGCAAATGTCCATACTTCAAGCACCTAATGTTCTTGTAATCCAACTTAAGAGATTCGAGGGTCTATTGGGTGGGAAGATTGATAAATCCATTTCATTTGAAGAGTTTTTGGTGCTTTCGAGCTTCATGTGCAAAAAAAGCCAGGATCCACGTCCGGAATATAAGCTTTGTGGTACTATTGTGCACTCTGGTTTTTCACCTGAATCTGGTCATTATTATGCATATATTAAGGATGCAATGGGTCGTTGGTATTGCTGCAACGATCAGTTTGTCTCACTTTCAACTTTGCAAGAGGTTTTATCTGAAAAAGTTTACATCCTTTTCTTTTCCCGTACCAACCAACGGTCGGTTAATGCTGCTTCAAATGGTCTGAAGTCTCCTGATTGTAATGGTCATGAAGCTTCTAAAAAGCCAAAACCTGGTCTTCCACCAAAAGGACCACAGATAAAAATTTCTGATAAAGTGCCTTCAGGTGCGCGGATGAAGTTTAATATCAATGGGAACAATAGCACCAAAAGAAGTCCTGCAAGTGAGAATGGAAAAGTAGCTCACAAGAAACAACCTCTGGGATCAAATGGGGAGGTGAAGGACTTGGTTAGTTTGAACAGAAGTGATAAAGTCAAGGTGTCTTTGATAAATGGGGATGGTTTGAACAGGAGTATAAAATCTGATACTATTGAAGCTAGCAACAACCAGGCATTTTCATCACCAATAGAAAACAGTAGTGCGGCTTCAGTGAAATCCGAACTCTCTGAATGTACTGGTTCAGTGAAAACTGAACTCCCTGATCACTCTGAATTGGATAGCAGTGTTCTCCATGGCCACCCTATGGTCCTTGGGCCCAAAAGAAAATCTCAGGGTTCATGCATTTTGTTTGAACATGATGCTCAATCTCTGGAAAAAGTTGAAAAACTGAAGGAAGGTCTGAAGAAAGAAGCTCTATCAGTTTTGCGATCATGTGGTTGGGTAGACGACATTACCAGTTTTATGCGATCCCGGAAAAAGTTATGTGTAGATCAAGTTGGACTCGCTCAGAATGGTGATGAAGCAAAGAAACAGTTGATCAGGGATTCCAAATCAACTTTTATTTCAAAGATACCTGAGTCTTTGAAAGGGGGCTTCATCAAACGTATTAAATCATTTAGCCAAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0022626 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

629

Amino Acids

69.5

Weight (kDa)

9.26

Isoelectric Point (pI)

53.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	27 - 353	7.7e-56	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	27 - 334	6.6e-19	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14400
fragaria_vesca	FvH4_3g16490 FvH4_3g16490 FvH4_3g16490 FvH4_3g16490
malus_domestica	MD05G1209600.v1.1 MD10G1195900.v1.1
prunus_persica	Prupe.4G147900_v2.0.a1
pyrus_communis	pycom05g19560 pycom10g16950
rosa_chinensis	RchiOBHm_Chr5g0027541
rosa_laevigata	RLG00000033025
rosa_multiflora	Rmu_co8326735.1_g000001 Rmu_co8467017.1_g000001 Rmu_sc0004493.1_g000008 Rmu_sc0007802.1_g000039 Rmu_sc0011056.1_g000009
rosa_roxburghii	Rroxscaffold_1G00052000 Rroxscaffold_1G00052020
rosa_rugosa	Rorug05G0099400 Rorug05G0099500 Rorug05G0099600
rosa_samantha	Rh5AG193700 Rh5BG191700 Rh5CG211900 Rh5DG193400 Rh5DG193600
rosa_wichuraiana	Rw5G017660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1151, 1561
AccI	GTMKAC	2 cut(s)	43, 1701
AccII	CGCG	3 cut(s)	216, 353, 1210
AccIII	TCCGGA	1 cut(s)	886
AciI	CCGC	5 cut(s)	71, 288, 403, 1210, 1460
AclI	AACGTT	1 cut(s)	486
AclWI	GGATC	5 cut(s)	276, 872, 885, 1309, 1719
AcoI	YGGCCR	4 cut(s)	337, 457, 682, 1552
AcsI	RAATTY	1 cut(s)	1182
AcuI	CTGAAG	5 cut(s)	1124, 1185, 1449, 1667, 1679
AfaI	GTAC	4 cut(s)	695, 907, 1066, 1492
AfiI	CCNNNNNNNGG	8 cut(s)	77, 297, 938, 1074, 1078, 1151, 1166, 1561
AflII	CTTAAG	1 cut(s)	779
AjiI	CACGTC	1 cut(s)	884
AjnI	CCWGG	4 cut(s)	549, 873, 1150, 1425
AleI	CACNNNNGTG	1 cut(s)	515
Alw21I	GWGCWC	1 cut(s)	918
Alw26I	GTCTC	3 cut(s)	261, 1009, 1113
Alw44I	GTGCAC	1 cut(s)	914
AlwI	GGATC	5 cut(s)	276, 872, 885, 1309, 1719
Aor13HI	TCCGGA	1 cut(s)	886
AoxI	GGCC	6 cut(s)	67, 337, 457, 682, 1552, 1571
ApaI	GGGCCC	1 cut(s)	1575
ApaLI	GTGCAC	1 cut(s)	914
ApeKI	GCWGC	4 cut(s)	34, 725, 987, 1088
ApoI	RAATTY	1 cut(s)	1182
Asp700I	GAANNNNTTC	1 cut(s)	314
AspLEI	GCGC	5 cut(s)	216, 286, 355, 423, 1210
AspS9I	GGNCC	5 cut(s)	68, 1169, 1564, 1571, 1572
AsuC2I	CCSGG	1 cut(s)	1729
AsuHPI	GGTGA	8 cut(s)	124, 421, 529, 565, 921, 1327, 1431, 1784
AsuII	TTCGAA	1 cut(s)	166
AsuNHI	GCTAGC	1 cut(s)	1415
AvaII	GGWCC	2 cut(s)	1169, 1564
BaeGI	GKGCMC	2 cut(s)	918, 1575
BaeI	ACNNNNGTAYC	4 cut(s)	897, 930, 1820, 1853
BalI	TGGCCA	3 cut(s)	459, 684, 1554
BamHI	GGATCC	1 cut(s)	877
BanII	GRGCYC	1 cut(s)	1575
BarI	GAAGNNNNNNTAC	2 cut(s)	1447, 1479
BbsI	GAAGAC	3 cut(s)	68, 354, 1148
Bbv12I	GWGCWC	1 cut(s)	918
BbvI	GCAGC	4 cut(s)	46, 737, 974, 1075
BccI	CCATC	3 cut(s)	514, 674, 1370
BceAI	ACGGC	2 cut(s)	352, 466
BciT130I	CCWGG	4 cut(s)	551, 875, 1152, 1427
BclI	TGATCA	2 cut(s)	1519, 1794
BcnI	CCSGG	1 cut(s)	1729
BcoDI	GTCTC	3 cut(s)	261, 1009, 1113
BfaI	CTAG	3 cut(s)	77, 278, 1416
BfrI	CTTAAG	1 cut(s)	779
BisI	GCNGC	5 cut(s)	35, 726, 988, 1089, 1461
BlsI	GCNGC	5 cut(s)	36, 727, 989, 1090, 1462
Bme1390I	CCNGG	5 cut(s)	551, 875, 1152, 1427, 1729
Bme18I	GGWCC	2 cut(s)	1169, 1564
BmgBI	CACGTC	1 cut(s)	884
BmgT120I	GGNCC	5 cut(s)	68, 1169, 1564, 1571, 1572
BmiI	GGNNCC	3 cut(s)	501, 879, 1573
BmrFI	CCNGG	5 cut(s)	551, 875, 1152, 1427, 1729
BmsI	GCATC	4 cut(s)	271, 370, 955, 1606
BmtI	GCTAGC	1 cut(s)	1419
BpiI	GAAGAC	3 cut(s)	68, 354, 1148
BpmI	CTGGAG	2 cut(s)	107, 257
Bpu14I	TTCGAA	1 cut(s)	166
BpuMI	CCSGG	1 cut(s)	1729
BsaI	GGTCTC	1 cut(s)	261
BsaJI	CCNNGG	5 cut(s)	91, 334, 510, 1549, 1567
BsaWI	WCCGGW	2 cut(s)	431, 886
BsaXI	ACNNNNNCTCC	4 cut(s)	161, 191, 484, 514
Bsc4I	CCNNNNNNNGG	8 cut(s)	77, 297, 938, 1074, 1078, 1151, 1166, 1561
Bse118I	RCCGGY	1 cut(s)	339
Bse1I	ACTGG	4 cut(s)	124, 664, 1498, 1713
Bse3DI	GCAATG	2 cut(s)	460, 975
BseAI	TCCGGA	1 cut(s)	886
BseBI	CCWGG	4 cut(s)	551, 875, 1152, 1427
BseDI	CCNNGG	5 cut(s)	91, 334, 510, 1549, 1567
BseGI	GGATG	6 cut(s)	622, 685, 970, 1047, 1218, 1381
BseLI	CCNNNNNNNGG	8 cut(s)	77, 297, 938, 1074, 1078, 1151, 1166, 1561
BseMI	GCAATG	2 cut(s)	460, 975
BseMII	CTCAG	7 cut(s)	38, 274, 286, 660, 1601, 1778, 1824
BseNI	ACTGG	4 cut(s)	124, 664, 1498, 1713
BseRI	GAGGAG	2 cut(s)	169, 256
BseSI	GKGCMC	2 cut(s)	918, 1575
BseX3I	CGGCCG	1 cut(s)	337
BseXI	GCAGC	4 cut(s)	46, 737, 974, 1075
BsgI	GTGCAG	1 cut(s)	29
Bsh1236I	CGCG	3 cut(s)	216, 353, 1210
Bsh1285I	CGRYCG	2 cut(s)	340, 1079
BshFI	GGCC	6 cut(s)	69, 339, 459, 684, 1554, 1573
BsiEI	CGRYCG	2 cut(s)	340, 1079
BsiHKAI	GWGCWC	1 cut(s)	918
BsiSI	CCGG	5 cut(s)	340, 418, 432, 887, 1729
BslI	CCNNNNNNNGG	8 cut(s)	77, 297, 938, 1074, 1078, 1151, 1166, 1561
BsmAI	GTCTC	3 cut(s)	261, 1009, 1113
BsnI	GGCC	6 cut(s)	69, 339, 459, 684, 1554, 1573
Bso31I	GGTCTC	1 cut(s)	261
Bsp119I	TTCGAA	1 cut(s)	166
Bsp120I	GGGCCC	1 cut(s)	1571
Bsp1286I	GDGCHC	2 cut(s)	918, 1575
Bsp13I	TCCGGA	1 cut(s)	886
Bsp143I	GATC	9 cut(s)	268, 877, 994, 1301, 1519, 1685, 1724, 1747, 1794
Bsp19I	CCATGG	1 cut(s)	1549
BspACI	CCGC	5 cut(s)	71, 288, 403, 1210, 1460
BspANI	GGCC	6 cut(s)	69, 339, 459, 684, 1554, 1573
BspCNI	CTCAG	7 cut(s)	39, 273, 285, 661, 1600, 1777, 1825
BspEI	TCCGGA	1 cut(s)	886
BspFNI	CGCG	3 cut(s)	216, 353, 1210
BspHI	TCATGA	1 cut(s)	1126
BspLI	GGNNCC	3 cut(s)	501, 879, 1573
BspOI	GCTAGC	1 cut(s)	1419
BspPI	GGATC	5 cut(s)	276, 872, 885, 1309, 1719
BspT104I	TTCGAA	1 cut(s)	166
BspTI	CTTAAG	1 cut(s)	779
BspTNI	GGTCTC	1 cut(s)	261
BsrDI	GCAATG	2 cut(s)	460, 975
BsrFI	RCCGGY	1 cut(s)	339
BsrI	ACTGG	4 cut(s)	124, 664, 1498, 1713
BssAI	RCCGGY	1 cut(s)	339
BssECI	CCNNGG	5 cut(s)	91, 334, 510, 1549, 1567
BssMI	GATC	9 cut(s)	268, 877, 994, 1301, 1519, 1685, 1724, 1747, 1794
BssT1I	CCWWGG	2 cut(s)	1549, 1567
Bst2UI	CCWGG	4 cut(s)	551, 875, 1152, 1427
Bst4CI	ACNGT	5 cut(s)	496, 514, 1077, 1454, 1791
Bst6I	CTCTTC	1 cut(s)	828
BstAFI	CTTAAG	1 cut(s)	779
BstAPI	GCANNNNNTGC	1 cut(s)	102
BstBI	TTCGAA	1 cut(s)	166
BstC8I	GCNNGC	7 cut(s)	8, 71, 233, 288, 341, 385, 1417
BstDEI	CTNAG	8 cut(s)	47, 260, 272, 669, 729, 1587, 1764, 1833
BstDSI	CCRYGG	3 cut(s)	334, 510, 1549
BstF5I	GGATG	6 cut(s)	622, 685, 970, 1047, 1218, 1381
BstFNI	CGCG	3 cut(s)	216, 353, 1210
BstHHI	GCGC	5 cut(s)	216, 286, 355, 423, 1210
BstKTI	GATC	9 cut(s)	271, 880, 997, 1304, 1522, 1688, 1727, 1750, 1797
BstMAI	GTCTC	3 cut(s)	261, 1009, 1113
BstMBI	GATC	9 cut(s)	268, 877, 994, 1301, 1519, 1685, 1724, 1747, 1794
BstMCI	CGRYCG	2 cut(s)	340, 1079
BstMWI	GCNNNNNNNGC	3 cut(s)	102, 861, 870
BstNI	CCWGG	4 cut(s)	551, 875, 1152, 1427
BstNSI	RCATGY	1 cut(s)	235
BstSCI	CCNGG	5 cut(s)	549, 873, 1150, 1425, 1727
BstSLI	GKGCMC	2 cut(s)	918, 1575
BstUI	CGCG	3 cut(s)	216, 353, 1210
BstV1I	GCAGC	4 cut(s)	46, 737, 974, 1075
BstV2I	GAAGAC	3 cut(s)	68, 354, 1148
BstX2I	RGATCY	2 cut(s)	268, 877
BstYI	RGATCY	2 cut(s)	268, 877
BstZI	CGGCCG	1 cut(s)	337
BsuRI	GGCC	6 cut(s)	69, 339, 459, 684, 1554, 1573
BtgI	CCRYGG	3 cut(s)	334, 510, 1549
BtrI	CACGTC	1 cut(s)	884
BtsCI	GGATG	6 cut(s)	622, 685, 970, 1047, 1218, 1381
BtsI	GCAGTG	1 cut(s)	1546
BtsIMutI	CAGTG	5 cut(s)	131, 268, 1473, 1506, 1546
Cac8I	GCNNGC	7 cut(s)	8, 71, 233, 288, 341, 385, 1417
CciI	TCATGA	1 cut(s)	1126
CfoI	GCGC	5 cut(s)	216, 286, 355, 423, 1210
Cfr10I	RCCGGY	1 cut(s)	339
Cfr13I	GGNCC	5 cut(s)	68, 1169, 1564, 1571, 1572
CseI	GACGC	3 cut(s)	106, 359, 653
CsiI	ACCWGGT	1 cut(s)	1150
Csp6I	GTAC	4 cut(s)	694, 906, 1065, 1491
CspCI	CAANNNNNGTGG	2 cut(s)	377, 412
CviAII	CATG	9 cut(s)	232, 356, 461, 859, 1127, 1550, 1596, 1613, 1689
CviQI	GTAC	4 cut(s)	694, 906, 1065, 1491
DdeI	CTNAG	8 cut(s)	47, 260, 272, 669, 729, 1587, 1764, 1833
DpnI	GATC	9 cut(s)	270, 879, 996, 1303, 1521, 1687, 1726, 1749, 1796
DpnII	GATC	9 cut(s)	268, 877, 994, 1301, 1519, 1685, 1724, 1747, 1794
EaeI	YGGCCR	4 cut(s)	337, 457, 682, 1552
EagI	CGGCCG	1 cut(s)	337
Eam1104I	CTCTTC	1 cut(s)	828
EarI	CTCTTC	1 cut(s)	828
EclXI	CGGCCG	1 cut(s)	337
Eco130I	CCWWGG	2 cut(s)	1549, 1567
Eco24I	GRGCYC	1 cut(s)	1575
Eco31I	GGTCTC	1 cut(s)	261
Eco47I	GGWCC	2 cut(s)	1169, 1564
Eco52I	CGGCCG	1 cut(s)	337
Eco57I	CTGAAG	5 cut(s)	1124, 1185, 1449, 1667, 1679
EcoRII	CCWGG	4 cut(s)	549, 873, 1150, 1425
EcoT14I	CCWWGG	2 cut(s)	1549, 1567
EcoT22I	ATGCAT	2 cut(s)	955, 1601
EcoT38I	GRGCYC	1 cut(s)	1575
ErhI	CCWWGG	2 cut(s)	1549, 1567
FaeI	CATG	9 cut(s)	235, 359, 464, 862, 1130, 1553, 1599, 1616, 1692
FatI	CATG	9 cut(s)	231, 355, 460, 858, 1126, 1549, 1595, 1612, 1688
FauI	CCCGC	2 cut(s)	78, 295
FbaI	TGATCA	2 cut(s)	1519, 1794
FblI	GTMKAC	2 cut(s)	43, 1701
Fnu4HI	GCNGC	5 cut(s)	35, 726, 988, 1089, 1461
FokI	GGATG	6 cut(s)	629, 692, 977, 1034, 1225, 1388
FriOI	GRGCYC	1 cut(s)	1575
Fsp4HI	GCNGC	5 cut(s)	35, 726, 988, 1089, 1461
FspBI	CTAG	3 cut(s)	77, 278, 1416
GlaI	GCGC	5 cut(s)	215, 285, 354, 422, 1209
GluI	GCNGC	5 cut(s)	35, 726, 988, 1089, 1461
GsuI	CTGGAG	2 cut(s)	107, 257
HaeIII	GGCC	6 cut(s)	69, 339, 459, 684, 1554, 1573
HapII	CCGG	5 cut(s)	340, 418, 432, 887, 1729
HgaI	GACGC	3 cut(s)	106, 359, 653
HhaI	GCGC	5 cut(s)	216, 286, 355, 423, 1210
Hin1II	CATG	9 cut(s)	235, 359, 464, 862, 1130, 1553, 1599, 1616, 1692
Hin6I	GCGC	5 cut(s)	214, 284, 353, 421, 1208
HinP1I	GCGC	5 cut(s)	214, 284, 353, 421, 1208
HindIII	AAGCTT	2 cut(s)	896, 1131
HpaII	CCGG	5 cut(s)	340, 418, 432, 887, 1729
HphI	GGTGA	8 cut(s)	124, 421, 529, 565, 921, 1327, 1431, 1784
Hpy166II	GTNNAC	5 cut(s)	44, 510, 916, 1045, 1702
Hpy188III	TCNNGA	6 cut(s)	278, 614, 887, 1112, 1127, 1628
Hpy8I	GTNNAC	5 cut(s)	44, 510, 916, 1045, 1702
Hpy99I	CGWCG	1 cut(s)	508
HpyAV	CCTTC	5 cut(s)	173, 1209, 1312, 1642, 1646
HpyCH4III	ACNGT	5 cut(s)	496, 514, 1077, 1454, 1791
HpyCH4IV	ACGT	4 cut(s)	372, 486, 883, 1861
HpyF10VI	GCNNNNNNNGC	3 cut(s)	102, 861, 870
HpyF3I	CTNAG	8 cut(s)	47, 260, 272, 669, 729, 1587, 1764, 1833
HpySE526I	ACGT	4 cut(s)	372, 486, 883, 1861
Hsp92II	CATG	9 cut(s)	235, 359, 464, 862, 1130, 1553, 1599, 1616, 1692
HspAI	GCGC	5 cut(s)	214, 284, 353, 421, 1208
Kpn2I	TCCGGA	1 cut(s)	886
KroI	GCCGGC	1 cut(s)	339
KroNI	GCCGGC	1 cut(s)	341
Ksp22I	TGATCA	2 cut(s)	1519, 1794
Kzo9I	GATC	9 cut(s)	268, 877, 994, 1301, 1519, 1685, 1724, 1747, 1794
LmnI	GCTCC	4 cut(s)	300, 420, 505, 536
Lsp1109I	GCAGC	4 cut(s)	46, 737, 974, 1075
LweI	GCATC	4 cut(s)	271, 370, 955, 1606
MabI	ACCWGGT	1 cut(s)	1150
MaeI	CTAG	3 cut(s)	77, 278, 1416
MaeII	ACGT	4 cut(s)	372, 486, 883, 1861
MaeIII	GTNAC	5 cut(s)	188, 368, 476, 490, 710
MalI	GATC	9 cut(s)	270, 879, 996, 1303, 1521, 1687, 1726, 1749, 1796
MboI	GATC	9 cut(s)	268, 877, 994, 1301, 1519, 1685, 1724, 1747, 1794
MboII	GAAGA	9 cut(s)	73, 97, 359, 421, 652, 820, 845, 1148, 1672
MfeI	CAATTG	1 cut(s)	17
MflI	RGATCY	2 cut(s)	268, 877
MhlI	GDGCHC	2 cut(s)	918, 1575
MlsI	TGGCCA	3 cut(s)	459, 684, 1554
MluCI	AATT	6 cut(s)	17, 154, 631, 716, 1182, 1529
MluNI	TGGCCA	3 cut(s)	459, 684, 1554
MlyI	GAGTC	6 cut(s)	49, 58, 185, 587, 1752, 1844
MmeI	TCCRAC	4 cut(s)	471, 507, 799, 1735
Mox20I	TGGCCA	3 cut(s)	459, 684, 1554
Mph1103I	ATGCAT	2 cut(s)	955, 1601
MroI	TCCGGA	1 cut(s)	886
MroNI	GCCGGC	1 cut(s)	339
MroXI	GAANNNNTTC	1 cut(s)	314
MscI	TGGCCA	3 cut(s)	459, 684, 1554
MseI	TTAA	6 cut(s)	639, 780, 960, 1083, 1221, 1866
MslI	CAYNNNNRTG	2 cut(s)	515, 948
Msp20I	TGGCCA	3 cut(s)	459, 684, 1554
MspCI	CTTAAG	1 cut(s)	779
MspI	CCGG	5 cut(s)	340, 418, 432, 887, 1729
MspR9I	CCNGG	5 cut(s)	551, 875, 1152, 1427, 1729
MunI	CAATTG	1 cut(s)	17
MvaI	CCWGG	4 cut(s)	551, 875, 1152, 1427
MvnI	CGCG	3 cut(s)	216, 353, 1210
MwoI	GCNNNNNNNGC	3 cut(s)	102, 861, 870
NaeI	GCCGGC	1 cut(s)	341
NciI	CCSGG	1 cut(s)	1729
NcoI	CCATGG	1 cut(s)	1549
NdeII	GATC	9 cut(s)	268, 877, 994, 1301, 1519, 1685, 1724, 1747, 1794
NgoMIV	GCCGGC	1 cut(s)	339
NheI	GCTAGC	1 cut(s)	1415
NlaIII	CATG	9 cut(s)	235, 359, 464, 862, 1130, 1553, 1599, 1616, 1692
NlaIV	GGNNCC	3 cut(s)	501, 879, 1573
NmeAIII	GCCGAG	2 cut(s)	63, 72
NmuCI	GTSAC	2 cut(s)	188, 476
NsiI	ATGCAT	2 cut(s)	955, 1601
NspI	RCATGY	1 cut(s)	235
NspV	TTCGAA	1 cut(s)	166
OliI	CACNNNNGTG	1 cut(s)	515
PaeI	GCATGC	1 cut(s)	235
PagI	TCATGA	1 cut(s)	1126
PcsI	WCGNNNNNNNCGW	1 cut(s)	500
PdiI	GCCGGC	1 cut(s)	341
PdmI	GAANNNNTTC	1 cut(s)	314
PfeI	GAWTC	4 cut(s)	295, 786, 935, 1802
PflMI	CCANNNNNTGG	2 cut(s)	1151, 1561
PfoI	TCCNGGA	1 cut(s)	1727
PkrI	GCNGC	5 cut(s)	36, 727, 989, 1090, 1462
PleI	GAGTC	6 cut(s)	48, 57, 185, 586, 1752, 1843
PpsI	GAGTC	6 cut(s)	48, 57, 185, 586, 1752, 1843
Psp1406I	AACGTT	1 cut(s)	486
Psp6I	CCWGG	4 cut(s)	549, 873, 1150, 1425
PspGI	CCWGG	4 cut(s)	549, 873, 1150, 1425
PspN4I	GGNNCC	3 cut(s)	501, 879, 1573
PspOMI	GGGCCC	1 cut(s)	1571
PspPI	GGNCC	5 cut(s)	68, 1169, 1564, 1571, 1572
PsuI	RGATCY	2 cut(s)	268, 877
RsaI	GTAC	4 cut(s)	695, 907, 1066, 1492
RsaNI	GTAC	4 cut(s)	694, 906, 1065, 1491
RseI	CAYNNNNRTG	2 cut(s)	515, 948
SaqAI	TTAA	6 cut(s)	639, 780, 960, 1083, 1221, 1866
SatI	GCNGC	5 cut(s)	35, 726, 988, 1089, 1461
Sau3AI	GATC	9 cut(s)	268, 877, 994, 1301, 1519, 1685, 1724, 1747, 1794
Sau96I	GGNCC	5 cut(s)	68, 1169, 1564, 1571, 1572
SchI	GAGTC	6 cut(s)	49, 58, 185, 587, 1752, 1844
ScrFI	CCNGG	5 cut(s)	551, 875, 1152, 1427, 1729
SduI	GDGCHC	2 cut(s)	918, 1575
SexAI	ACCWGGT	1 cut(s)	1150
SfaNI	GCATC	4 cut(s)	271, 370, 955, 1606
SfuI	TTCGAA	1 cut(s)	166
SinI	GGWCC	2 cut(s)	1169, 1564
SmiMI	CAYNNNNRTG	2 cut(s)	515, 948
SmlI	CTYRAG	1 cut(s)	779
SmoI	CTYRAG	1 cut(s)	779
SphI	GCATGC	1 cut(s)	235
Sse9I	AATT	6 cut(s)	17, 154, 631, 716, 1182, 1529
SsiI	CCGC	5 cut(s)	71, 288, 403, 1210, 1460
SspI	AATATT	1 cut(s)	313
SspMI	CTAG	3 cut(s)	77, 278, 1416
StyD4I	CCNGG	5 cut(s)	549, 873, 1150, 1425, 1727
StyI	CCWWGG	2 cut(s)	1549, 1567
TaaI	ACNGT	5 cut(s)	496, 514, 1077, 1454, 1791
TaiI	ACGT	4 cut(s)	375, 489, 886, 1864
TaqI	TCGA	3 cut(s)	166, 789, 851
TasI	AATT	6 cut(s)	17, 154, 631, 716, 1182, 1529
TatI	WGTACW	2 cut(s)	693, 1490
TauI	GCSGC	1 cut(s)	1463
TfiI	GAWTC	4 cut(s)	295, 786, 935, 1802
Tru1I	TTAA	6 cut(s)	639, 780, 960, 1083, 1221, 1866
Tru9I	TTAA	6 cut(s)	639, 780, 960, 1083, 1221, 1866
TscAI	CASTG	5 cut(s)	131, 268, 1473, 1506, 1546
TseFI	GTSAC	2 cut(s)	188, 476
TseI	GCWGC	4 cut(s)	34, 725, 987, 1088
Tsp45I	GTSAC	2 cut(s)	188, 476
TspDTI	ATGAA	8 cut(s)	816, 847, 1143, 1229, 1425, 1584, 1791, 1843
TspGWI	ACGGA	4 cut(s)	73, 213, 356, 492
TspRI	CASTG	5 cut(s)	131, 268, 1473, 1506, 1546
Van91I	CCANNNNNTGG	2 cut(s)	1151, 1561
Vha464I	CTTAAG	1 cut(s)	779
VneI	GTGCAC	1 cut(s)	914
VpaK11BI	GGWCC	2 cut(s)	1169, 1564
XapI	RAATTY	1 cut(s)	1182
XbaI	TCTAGA	1 cut(s)	277
XceI	RCATGY	1 cut(s)	235
XcmI	CCANNNNNNNNNTGG	1 cut(s)	517
XmiI	GTMKAC	2 cut(s)	43, 1701
XmnI	GAANNNNTTC	1 cut(s)	314
XspI	CTAG	3 cut(s)	77, 278, 1416
Zsp2I	ATGCAT	2 cut(s)	955, 1601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.