Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0005652

Physical Location & Seq

Genomic Coordinates Forward (+)

34113264 .. 34121308

Gene Structure 8045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1209600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGGGCCTGCAATTCCAATTGCAGATGAGTTGGCAGCCGAGTCTACTGAGTCAGAAGCGGAAGAATGGCCTGCCGCCTCTAGGGTTACGCAACCTCGGCAACTCTTGCTACCTCAACAGCGTCCTCCAGTGCCTCACCTACACCCCTCCTCTCGCCAATTTCTGCCTCCGCAAACTCCACACCTCTCTCTGTGACTCTTCGGATGCGGAGCGGAAGCGCGACTGTCCCTTTTGCATTCTGGAGAAGCAGATAGTGCGGTCCCTGAGTCAGGATCTCAGTCCGGATGCGCCACAGAAGATACAGAGCTGTCTCGGGATTTTTGCCGAACACTTTCGGTGCGGACGACAGGAGGACGCTCATGAGTTCCTGCGCTACGTCATTGATGCTTGCCACAACACCTGCCTTCGGCTCATGAAGCTGCGACGCAATGCCACAGCCAACGGAAACGCTGCCAATGGCAATGGCAAAATGGCCAACGGCATAGGCAATGGGGAGGCGGCAACTTCAACGGTGGTGAAGGAGATATTTGGTGGAGCATTGCAGAGCCAGGTGAAGTGTCTATCTTGTGGCACAGAATCCAATAAGGTTGATGAGATAATGGATATTAGTCTTGATGTTTTGCATTGTAATTCGCTTAAAGACGCATTGCAAAGGTTCTTTCAGCCTGAGATTTTGGATGGCCAGAACAAGTACAAATGCGAAAGTTGTAAGAAATTGGTGGCAGCACGGAAGCAAATGTCTTTTCTTCAAGCACCAAATGTTCTTGTTATTCAACTTAAGAGATTTGAGGGTGTACTTGGCGGGAAGATTGATAAATCTATTTCATTTGAGGAGTTTTTGGTGCTTTCAGGGTTCATGTGCAAAACAAGCAAGGATACGCGGCCAGAGTATAAGCTTTTTGGTACTATTGTGCATTCAGGCTTCTCACCAGAGTCTGGTCACTATTATGCATATATTAAGGATGTCATAGGTCGGTGGTATTGCTGCAATGATTCATCTGTCTCACTTTCAACCTTGCAAAAGGTCTTATCTGAAAAGGTTTACATCCTTTTCTTCTCTCGTACCAATCAAAGGCCAGCATTGGCTAGCACTGCTTCCAATGGGGTGAGTTCTCATGATTGTAATGGTCGTGAAACATCTAAAACCCTGAAGTCCGCTCTTCCACCGAAAGGAGTTCAAACAAAACCTTATGATGTCTCAGCCGTATCTAAAGTTGATAAAGTGCCTTCCAGCCCACGGATGAAGTTCAATTTGAGCGGAAATTCCATCTCCAAGAGAGCACTCACAACTGATAATGGAATAACCGTTTACAAGAATCAATCCTTAGGGTCAAACGGGGAAAGATCTACTTCAACTGCTAATGGAAAAAGTGTTTACAAGAATCAGTCCTTAGGATCAAACGAGGAAAGAGTTCCTGCAACTGATAATGGAAAAATTGCTTACAAAAATGAATCGTGTGGGTCAAATGGGGAAAGAACTCCTGCAAATGATAATGGAAAAATTGCTGACAATAATCAATTATTAGGAACAAATGGGGAAAGAGCACGTGCAACTGATACTGGTAAAATTCCTTACAAGAATCAATCCACAGGATTAAATGGGGATGCAAAGGACTCAGTTAGTTTGGAGAAAAGTGAGAAGTCATTGTTGATAAACAGGGATTGTTTGAACAGGGGTAAAAGTCCTGCTATAGTTGACGGTAACAGTAGCCAGGCATCTTTATTATCACAAGTAAATGATGTAAAAGCTGAAGCCTGTGAAGGTGTTGATACAAAAGACAGGTTGGCAGCTAGGAAAGTGCCTAACAGTAGCCAAGCATCTTTGTTATCACGAGGAAATGTTGGTACTGGTTCAGTAAAAATTGAATCCTGTGAAGGTATTGGTACAAAAGATAGGTTGCCAGCTGGGAAAGTGCCTGATACGAGTGAATCGGAAAAAAGTGGTCTTCATGGCCGCTCTAAAGTGTCTGGGTCTAAAAGAAAATTTCTGGATTCATGCATTCTGTTTGCACCTGATGCTCAATCACAGGCAGAAGTTGAAGGACTAAAGGAAATTCTCAAGAAAGAAGCTTCTTCAGTTTTGCGATCATGTGGTTGGCTGGATGAAGTTCATAGTTTTATGCTTTCAAGGAAAAGATTATGTTCAGATCAAGTTGGAACCACTCCAAACAGCAACAAAGTGAAGAAGTTGTTGATCACAGATGCCAAATCAAGTTTTCTTTCACAAATACCCGCTTCTTTAAGAGGGGATTTAGTCAAGCGCATTCAATCATTTAGCAAAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0022626 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

762

Amino Acids

82.9

Weight (kDa)

9.27

Isoelectric Point (pI)

45.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	28 - 352	8.9e-56	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	28 - 334	3.4e-17	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14400
fragaria_vesca	FvH4_3g16490 FvH4_3g16490 FvH4_3g16490 FvH4_3g16490
malus_domestica	MD05G1209600.v1.1 MD10G1195900.v1.1
prunus_persica	Prupe.4G147900_v2.0.a1
pyrus_communis	pycom05g19560 pycom10g16950
rosa_chinensis	RchiOBHm_Chr5g0027541
rosa_laevigata	RLG00000033025
rosa_multiflora	Rmu_co8326735.1_g000001 Rmu_co8467017.1_g000001 Rmu_sc0004493.1_g000008 Rmu_sc0007802.1_g000039 Rmu_sc0011056.1_g000009
rosa_roxburghii	Rroxscaffold_1G00052000 Rroxscaffold_1G00052020
rosa_rugosa	Rorug05G0099400 Rorug05G0099500 Rorug05G0099600
rosa_samantha	Rh5AG193700 Rh5BG191700 Rh5CG211900 Rh5DG193400 Rh5DG193600
rosa_wichuraiana	Rw5G017660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	407
Acc36I	ACCTGC	1 cut(s)	407
AccB7I	CCANNNNNTGG	1 cut(s)	935
AccBSI	CCGCTC	4 cut(s)	211, 1157, 1257, 1956
AccI	GTMKAC	1 cut(s)	43
AccII	CGCG	2 cut(s)	219, 880
AccIII	TCCGGA	1 cut(s)	280
AclWI	GGATC	2 cut(s)	279, 1402
AcoI	YGGCCR	4 cut(s)	471, 679, 881, 1951
AcsI	RAATTY	4 cut(s)	1261, 1566, 1982, 2052
AcuI	CTGAAG	3 cut(s)	1169, 1770, 2058
AcvI	CACGTG	1 cut(s)	1547
AfaI	GTAC	6 cut(s)	692, 795, 904, 1063, 1846, 1885
AfiI	CCNNNNNNNGG	7 cut(s)	80, 268, 405, 935, 1071, 1169, 1236
AflII	CTTAAG	1 cut(s)	776
AjnI	CCWGG	2 cut(s)	546, 1710
AluBI	AGCT	7 cut(s)	306, 418, 895, 1748, 1790, 1904, 2069
AluI	AGCT	7 cut(s)	306, 418, 895, 1748, 1790, 1904, 2069
Alw21I	GWGCWC	2 cut(s)	1282, 1546
Alw26I	GTCTC	3 cut(s)	314, 1006, 1201
AlwI	GGATC	2 cut(s)	279, 1402
AlwNI	CAGNNNCTG	1 cut(s)	935
Ama87I	CYCGRG	1 cut(s)	311
Aor13HI	TCCGGA	1 cut(s)	280
AoxI	GGCC	7 cut(s)	4, 67, 471, 679, 881, 1073, 1951
ApeKI	GCWGC	6 cut(s)	34, 418, 449, 722, 984, 1787
ApoI	RAATTY	4 cut(s)	1261, 1566, 1982, 2052
Asp700I	GAANNNNTTC	2 cut(s)	330, 1410
AspLEI	GCGC	4 cut(s)	219, 289, 372, 2262
AspS9I	GGNCC	2 cut(s)	4, 258
AsuHPI	GGTGA	5 cut(s)	127, 526, 562, 918, 1117
AsuNHI	GCTAGC	1 cut(s)	1085
AvaI	CYCGRG	1 cut(s)	311
AvaII	GGWCC	1 cut(s)	258
AxyI	CCTNAGG	2 cut(s)	1324, 1390
BaeI	ACNNNNGTAYC	2 cut(s)	894, 927
BalI	TGGCCA	2 cut(s)	473, 681
BauI	CACGAG	1 cut(s)	1830
BbrPI	CACGTG	1 cut(s)	1547
BbsI	GAAGAC	1 cut(s)	1937
Bbv12I	GWGCWC	2 cut(s)	1282, 1546
BbvI	GCAGC	6 cut(s)	46, 405, 436, 734, 971, 1799
BccI	CCATC	2 cut(s)	671, 1274
BceAI	ACGGC	2 cut(s)	493, 1187
BciT130I	CCWGG	2 cut(s)	548, 1712
BciVI	GTATCC	1 cut(s)	868
BclI	TGATCA	1 cut(s)	2193
BcoDI	GTCTC	3 cut(s)	314, 1006, 1201
BfaI	CTAG	3 cut(s)	80, 1086, 1791
BfmI	CTRYAG	1 cut(s)	1689
BfrI	CTTAAG	1 cut(s)	776
BfuAI	ACCTGC	1 cut(s)	407
BfuI	GTATCC	1 cut(s)	868
BglII	AGATCT	1 cut(s)	1343
Bme1390I	CCNGG	2 cut(s)	548, 1712
Bme18I	GGWCC	1 cut(s)	258
BmeT110I	CYCGRG	1 cut(s)	311
BmgT120I	GGNCC	2 cut(s)	4, 258
BmiI	GGNNCC	2 cut(s)	260, 2158
BmrFI	CCNGG	2 cut(s)	548, 1712
BmsI	GCATC	8 cut(s)	193, 274, 373, 1594, 1724, 1826, 2005, 2191
BmtI	GCTAGC	1 cut(s)	1089
BpiI	GAAGAC	1 cut(s)	1937
BpmI	CTGGAG	2 cut(s)	110, 260
BpuEI	CTTGAG	1 cut(s)	2042
BsaAI	YACGTR	1 cut(s)	1547
BsaJI	CCNNGG	2 cut(s)	94, 1235
BsaWI	WCCGGW	1 cut(s)	280
Bsc4I	CCNNNNNNNGG	7 cut(s)	80, 268, 405, 935, 1071, 1169, 1236
Bse1I	ACTGG	3 cut(s)	127, 1564, 1852
Bse21I	CCTNAGG	2 cut(s)	1324, 1390
Bse3DI	GCAATG	6 cut(s)	433, 466, 493, 536, 644, 994
BseAI	TCCGGA	1 cut(s)	280
BseBI	CCWGG	2 cut(s)	548, 1712
BseDI	CCNNGG	2 cut(s)	94, 1235
BseGI	GGATG	8 cut(s)	208, 289, 682, 967, 1044, 1245, 1609, 2107
BseLI	CCNNNNNNNGG	7 cut(s)	80, 268, 405, 935, 1071, 1169, 1236
BseMI	GCAATG	6 cut(s)	433, 466, 493, 536, 644, 994
BseMII	CTCAG	6 cut(s)	38, 254, 289, 657, 1212, 1629
BseNI	ACTGG	3 cut(s)	127, 1564, 1852
BseRI	GAGGAG	2 cut(s)	138, 845
BseXI	GCAGC	6 cut(s)	46, 405, 436, 734, 971, 1799
BseYI	CCCAGC	1 cut(s)	1904
Bsh1236I	CGCG	2 cut(s)	219, 880
BshFI	GGCC	7 cut(s)	6, 69, 473, 681, 883, 1075, 1953
BsiHKAI	GWGCWC	2 cut(s)	1282, 1546
BsiHKCI	CYCGRG	1 cut(s)	311
BsiSI	CCGG	1 cut(s)	281
BslFI	GGGAC	2 cut(s)	210, 244
BslI	CCNNNNNNNGG	7 cut(s)	80, 268, 405, 935, 1071, 1169, 1236
BsmAI	GTCTC	3 cut(s)	314, 1006, 1201
BsmFI	GGGAC	2 cut(s)	210, 244
BsmI	GAATGC	4 cut(s)	234, 913, 1998, 2262
BsnI	GGCC	7 cut(s)	6, 69, 473, 681, 883, 1075, 1953
BsoBI	CYCGRG	1 cut(s)	311
Bsp1286I	GDGCHC	2 cut(s)	1282, 1546
Bsp13I	TCCGGA	1 cut(s)	280
Bsp143I	GATC	6 cut(s)	271, 1343, 1394, 2084, 2146, 2193
BspANI	GGCC	7 cut(s)	6, 69, 473, 681, 883, 1075, 1953
BspCNI	CTCAG	6 cut(s)	39, 255, 288, 658, 1211, 1628
BspEI	TCCGGA	1 cut(s)	280
BspFNI	CGCG	2 cut(s)	219, 880
BspHI	TCATGA	3 cut(s)	358, 411, 1114
BspLI	GGNNCC	2 cut(s)	260, 2158
BspMI	ACCTGC	1 cut(s)	407
BspOI	GCTAGC	1 cut(s)	1089
BspPI	GGATC	2 cut(s)	279, 1402
BspQI	GCTCTTC	1 cut(s)	1164
BspTI	CTTAAG	1 cut(s)	776
BsrBI	CCGCTC	4 cut(s)	211, 1157, 1257, 1956
BsrDI	GCAATG	6 cut(s)	433, 466, 493, 536, 644, 994
BsrI	ACTGG	3 cut(s)	127, 1564, 1852
BssECI	CCNNGG	2 cut(s)	94, 1235
BssMI	GATC	6 cut(s)	271, 1343, 1394, 2084, 2146, 2193
BssSI	CACGAG	1 cut(s)	1830
Bst2BI	CACGAG	1 cut(s)	1830
Bst2UI	CCWGG	2 cut(s)	548, 1712
Bst4CI	ACNGT	6 cut(s)	224, 511, 1306, 1700, 1706, 1808
Bst6I	CTCTTC	2 cut(s)	202, 1164
BstAFI	CTTAAG	1 cut(s)	776
BstAPI	GCANNNNNTGC	3 cut(s)	105, 253, 2015
BstBAI	YACGTR	1 cut(s)	1547
BstC8I	GCNNGC	6 cut(s)	8, 71, 388, 1077, 1087, 1902
BstDEI	CTNAG	8 cut(s)	47, 263, 275, 666, 1198, 1324, 1390, 1615
BstDSI	CCRYGG	1 cut(s)	1235
BstENI	CCTNNNNNAGG	1 cut(s)	266
BstF5I	GGATG	8 cut(s)	208, 289, 682, 967, 1044, 1245, 1609, 2107
BstFNI	CGCG	2 cut(s)	219, 880
BstHHI	GCGC	4 cut(s)	219, 289, 372, 2262
BstKTI	GATC	6 cut(s)	274, 1346, 1397, 2087, 2149, 2196
BstMAI	GTCTC	3 cut(s)	314, 1006, 1201
BstMBI	GATC	6 cut(s)	271, 1343, 1394, 2084, 2146, 2193
BstMWI	GCNNNNNNNGC	7 cut(s)	96, 105, 253, 415, 867, 1091, 2015
BstNI	CCWGG	2 cut(s)	548, 1712
BstSCI	CCNGG	2 cut(s)	546, 1710
BstSFI	CTRYAG	1 cut(s)	1689
BstUI	CGCG	2 cut(s)	219, 880
BstV1I	GCAGC	6 cut(s)	46, 405, 436, 734, 971, 1799
BstV2I	GAAGAC	1 cut(s)	1937
BstX2I	RGATCY	2 cut(s)	271, 1343
BstYI	RGATCY	2 cut(s)	271, 1343
Bsu36I	CCTNAGG	2 cut(s)	1324, 1390
BsuI	GTATCC	1 cut(s)	868
BsuRI	GGCC	7 cut(s)	6, 69, 473, 681, 883, 1075, 1953
BtgI	CCRYGG	1 cut(s)	1235
BtsCI	GGATG	8 cut(s)	208, 289, 682, 967, 1044, 1245, 1609, 2107
BtsI	GCAGTG	1 cut(s)	1089
BtsIMutI	CAGTG	2 cut(s)	134, 1089
BveI	ACCTGC	1 cut(s)	407
Cac8I	GCNNGC	6 cut(s)	8, 71, 388, 1077, 1087, 1902
CaiI	CAGNNNCTG	1 cut(s)	935
CciI	TCATGA	3 cut(s)	358, 411, 1114
CfoI	GCGC	4 cut(s)	219, 289, 372, 2262
Cfr13I	GGNCC	2 cut(s)	4, 258
CseI	GACGC	4 cut(s)	109, 362, 432, 650
Csp6I	GTAC	6 cut(s)	691, 794, 903, 1062, 1845, 1884
CviAII	CATG	7 cut(s)	359, 412, 856, 1115, 1949, 1995, 2088
CviQI	GTAC	6 cut(s)	691, 794, 903, 1062, 1845, 1884
DdeI	CTNAG	8 cut(s)	47, 263, 275, 666, 1198, 1324, 1390, 1615
DpnI	GATC	6 cut(s)	273, 1345, 1396, 2086, 2148, 2195
DpnII	GATC	6 cut(s)	271, 1343, 1394, 2084, 2146, 2193
EaeI	YGGCCR	4 cut(s)	471, 679, 881, 1951
Eam1104I	CTCTTC	2 cut(s)	202, 1164
EarI	CTCTTC	2 cut(s)	202, 1164
Eco47I	GGWCC	1 cut(s)	258
Eco57I	CTGAAG	3 cut(s)	1169, 1770, 2058
Eco72I	CACGTG	1 cut(s)	1547
Eco81I	CCTNAGG	2 cut(s)	1324, 1390
Eco88I	CYCGRG	1 cut(s)	311
EcoNI	CCTNNNNNAGG	1 cut(s)	266
EcoRII	CCWGG	2 cut(s)	546, 1710
EcoT22I	ATGCAT	2 cut(s)	952, 2000
FaeI	CATG	7 cut(s)	362, 415, 859, 1118, 1952, 1998, 2091
FalI	AAGNNNNNCTT	2 cut(s)	1333, 1365
FaqI	GGGAC	2 cut(s)	210, 244
FatI	CATG	7 cut(s)	358, 411, 855, 1114, 1948, 1994, 2087
FauI	CCCGC	2 cut(s)	794, 2239
FbaI	TGATCA	1 cut(s)	2193
FblI	GTMKAC	1 cut(s)	43
FokI	GGATG	8 cut(s)	215, 296, 689, 974, 1031, 1252, 1616, 2114
FspBI	CTAG	3 cut(s)	80, 1086, 1791
GlaI	GCGC	4 cut(s)	218, 288, 371, 2261
GsaI	CCCAGC	1 cut(s)	1908
GsuI	CTGGAG	2 cut(s)	110, 260
HaeIII	GGCC	7 cut(s)	6, 69, 473, 681, 883, 1075, 1953
HapII	CCGG	1 cut(s)	281
HgaI	GACGC	4 cut(s)	109, 362, 432, 650
HhaI	GCGC	4 cut(s)	219, 289, 372, 2262
Hin1II	CATG	7 cut(s)	362, 415, 859, 1118, 1952, 1998, 2091
Hin6I	GCGC	4 cut(s)	217, 287, 370, 2260
HinP1I	GCGC	4 cut(s)	217, 287, 370, 2260
HincII	GTYRAC	1 cut(s)	1696
HindII	GTYRAC	1 cut(s)	1696
HindIII	AAGCTT	2 cut(s)	893, 2067
HpaII	CCGG	1 cut(s)	281
HphI	GGTGA	5 cut(s)	127, 526, 562, 918, 1117
Hpy166II	GTNNAC	6 cut(s)	44, 794, 1042, 1309, 1375, 1696
Hpy188I	TCNGA	5 cut(s)	54, 202, 1033, 1933, 2146
Hpy8I	GTNNAC	6 cut(s)	44, 794, 1042, 1309, 1375, 1696
Hpy99I	CGWCG	1 cut(s)	426
HpyAV	CCTTC	6 cut(s)	413, 511, 1236, 1754, 1868, 2033
HpyCH4III	ACNGT	6 cut(s)	224, 511, 1306, 1700, 1706, 1808
HpyCH4IV	ACGT	2 cut(s)	375, 1546
HpyF10VI	GCNNNNNNNGC	7 cut(s)	96, 105, 253, 415, 867, 1091, 2015
HpyF3I	CTNAG	8 cut(s)	47, 263, 275, 666, 1198, 1324, 1390, 1615
HpySE526I	ACGT	2 cut(s)	375, 1546
Hsp92II	CATG	7 cut(s)	362, 415, 859, 1118, 1952, 1998, 2091
HspAI	GCGC	4 cut(s)	217, 287, 370, 2260
Kpn2I	TCCGGA	1 cut(s)	280
Ksp22I	TGATCA	1 cut(s)	2193
Kzo9I	GATC	6 cut(s)	271, 1343, 1394, 2084, 2146, 2193
LguI	GCTCTTC	1 cut(s)	1164
LmnI	GCTCC	2 cut(s)	208, 533
Lsp1109I	GCAGC	6 cut(s)	46, 405, 436, 734, 971, 1799
LweI	GCATC	8 cut(s)	193, 274, 373, 1594, 1724, 1826, 2005, 2191
MaeI	CTAG	3 cut(s)	80, 1086, 1791
MaeII	ACGT	2 cut(s)	375, 1546
MaeIII	GTNAC	4 cut(s)	84, 191, 938, 1700
MalI	GATC	6 cut(s)	273, 1345, 1396, 2086, 2148, 2195
MbiI	CCGCTC	4 cut(s)	211, 1157, 1257, 1956
MboI	GATC	6 cut(s)	271, 1343, 1394, 2084, 2146, 2193
MfeI	CAATTG	1 cut(s)	17
MflI	RGATCY	2 cut(s)	271, 1343
MhlI	GDGCHC	2 cut(s)	1282, 1546
MlsI	TGGCCA	2 cut(s)	473, 681
MluNI	TGGCCA	2 cut(s)	473, 681
MlyI	GAGTC	6 cut(s)	49, 58, 188, 274, 941, 1607
MmeI	TCCRAC	1 cut(s)	2134
Mox20I	TGGCCA	2 cut(s)	473, 681
Mph1103I	ATGCAT	2 cut(s)	952, 2000
MroI	TCCGGA	1 cut(s)	280
MroXI	GAANNNNTTC	2 cut(s)	330, 1410
MscI	TGGCCA	2 cut(s)	473, 681
MseI	TTAA	5 cut(s)	636, 777, 957, 1595, 2240
MslI	CAYNNNNRTG	1 cut(s)	945
Msp20I	TGGCCA	2 cut(s)	473, 681
MspA1I	CMGCKG	1 cut(s)	1904
MspCI	CTTAAG	1 cut(s)	776
MspI	CCGG	1 cut(s)	281
MspR9I	CCNGG	2 cut(s)	548, 1712
MunI	CAATTG	1 cut(s)	17
Mva1269I	GAATGC	4 cut(s)	234, 913, 1998, 2262
MvaI	CCWGG	2 cut(s)	548, 1712
MvnI	CGCG	2 cut(s)	219, 880
MwoI	GCNNNNNNNGC	7 cut(s)	96, 105, 253, 415, 867, 1091, 2015
NdeII	GATC	6 cut(s)	271, 1343, 1394, 2084, 2146, 2193
NheI	GCTAGC	1 cut(s)	1085
NlaIII	CATG	7 cut(s)	362, 415, 859, 1118, 1952, 1998, 2091
NlaIV	GGNNCC	2 cut(s)	260, 2158
NmeAIII	GCCGAG	2 cut(s)	63, 75
NmuCI	GTSAC	2 cut(s)	191, 938
NsiI	ATGCAT	2 cut(s)	952, 2000
PagI	TCATGA	3 cut(s)	358, 411, 1114
PaqCI	CACCTGC	1 cut(s)	407
PciSI	GCTCTTC	1 cut(s)	1164
PcsI	WCGNNNNNNNCGW	1 cut(s)	340
PctI	GAATGC	4 cut(s)	234, 913, 1998, 2262
PdmI	GAANNNNTTC	2 cut(s)	330, 1410
PfeI	GAWTC	9 cut(s)	575, 992, 1315, 1381, 1451, 1579, 1865, 1928, 1991
PflMI	CCANNNNNTGG	1 cut(s)	935
PleI	GAGTC	6 cut(s)	48, 57, 188, 273, 940, 1607
PmaCI	CACGTG	1 cut(s)	1547
PmlI	CACGTG	1 cut(s)	1547
PpsI	GAGTC	6 cut(s)	48, 57, 188, 273, 940, 1607
Ppu21I	YACGTR	1 cut(s)	1547
Psp6I	CCWGG	2 cut(s)	546, 1710
PspCI	CACGTG	1 cut(s)	1547
PspFI	CCCAGC	1 cut(s)	1904
PspGI	CCWGG	2 cut(s)	546, 1710
PspN4I	GGNNCC	2 cut(s)	260, 2158
PspPI	GGNCC	2 cut(s)	4, 258
PstNI	CAGNNNCTG	1 cut(s)	935
PsuI	RGATCY	2 cut(s)	271, 1343
PvuII	CAGCTG	1 cut(s)	1904
RsaI	GTAC	6 cut(s)	692, 795, 904, 1063, 1846, 1885
RsaNI	GTAC	6 cut(s)	691, 794, 903, 1062, 1845, 1884
RseI	CAYNNNNRTG	1 cut(s)	945
SapI	GCTCTTC	1 cut(s)	1164
SaqAI	TTAA	5 cut(s)	636, 777, 957, 1595, 2240
Sau3AI	GATC	6 cut(s)	271, 1343, 1394, 2084, 2146, 2193
Sau96I	GGNCC	2 cut(s)	4, 258
SchI	GAGTC	6 cut(s)	49, 58, 188, 274, 941, 1607
ScrFI	CCNGG	2 cut(s)	548, 1712
SduI	GDGCHC	2 cut(s)	1282, 1546
SfaNI	GCATC	8 cut(s)	193, 274, 373, 1594, 1724, 1826, 2005, 2191
SfcI	CTRYAG	1 cut(s)	1689
SinI	GGWCC	1 cut(s)	258
SmiMI	CAYNNNNRTG	1 cut(s)	945
SmlI	CTYRAG	2 cut(s)	776, 2057
SmoI	CTYRAG	2 cut(s)	776, 2057
SspMI	CTAG	3 cut(s)	80, 1086, 1791
StyD4I	CCNGG	2 cut(s)	546, 1710
TaaI	ACNGT	6 cut(s)	224, 511, 1306, 1700, 1706, 1808
TaiI	ACGT	2 cut(s)	378, 1549
TatI	WGTACW	2 cut(s)	690, 793
TauI	GCSGC	4 cut(s)	76, 500, 883, 1956
TfiI	GAWTC	9 cut(s)	575, 992, 1315, 1381, 1451, 1579, 1865, 1928, 1991
Tru1I	TTAA	5 cut(s)	636, 777, 957, 1595, 2240
Tru9I	TTAA	5 cut(s)	636, 777, 957, 1595, 2240
TscAI	CASTG	2 cut(s)	134, 1096
TseFI	GTSAC	2 cut(s)	191, 938
TseI	GCWGC	6 cut(s)	34, 418, 449, 722, 984, 1787
Tsp45I	GTSAC	2 cut(s)	191, 938
TspGWI	ACGGA	3 cut(s)	456, 742, 1252
TspRI	CASTG	2 cut(s)	134, 1096
Van91I	CCANNNNNTGG	1 cut(s)	935
Vha464I	CTTAAG	1 cut(s)	776
VpaK11BI	GGWCC	1 cut(s)	258
XagI	CCTNNNNNAGG	1 cut(s)	266
XapI	RAATTY	4 cut(s)	1261, 1566, 1982, 2052
XmiI	GTMKAC	1 cut(s)	43
XmnI	GAANNNNTTC	2 cut(s)	330, 1410
XspI	CTAG	3 cut(s)	80, 1086, 1791
Zsp2I	ATGCAT	2 cut(s)	952, 2000

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.