Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0005652

Physical Location & Seq

Genomic Coordinates Reverse (-)

22491881 .. 22498309

Gene Structure 6429 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG193700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGCTGGAGAGGCGAATAGTCCGCTCCTTGAGTGTGGATCTCAGTCTAGATGCGCCGGCGAAGATTCGGAGCTGTCTGAATATTTTCGCCGAACACTTTCGCCACGGTCGTCAGGAAGACGCTCATGAATTCCTGCGTTACGTTATTGATGCTTGCCACAACACGTGCCTTCGCCTGAAGAAGCTCCGGCGCAACATCACCAGCAATGGCCATGCCAACGGCAATGGTCAGGCCAACGGCAAAGCCAATGGGACGGCTCCGGGGTCGTCCACTGTGGTGATGGAGATTTTCGGGGGAGCTTTGCAGAGCCAGGTGAAGTGTCTATCCTGTGGCACAGAGTCCAATAAGGTTGATGAGATAATGGATATTAGTCTTGATGTTTTGCATAGTAATTCACTTAAAGACGCCTTGCAAAGGTTCTTCCAGTCTGAGCTTTTGGATGGCCAGAACAAGTACAAGTGTGAAAGATGTAACAAATTGGTGGCGGCTAGGAAGCAGATGTCGATACTTCAAGCACCTAATGTTCTTGTAATCCAACTTAAGAGATTTGAGGGTCTATTGGGTGGGAAGATTGATAAATCCATTGCATTTGAAGAGTTTTTGGTGCTGTCGAGCTTCATGTGCAAAACAAGTCAGGATCCACGTCCAGAATATAAGCTTTGTGGTACTATTGTACATTCTGGTTTTTCACCTGAGTCTGGTCATTATTATGCATATATTAAGGATGCGATGGGTCGTTGGTATTGCTGCAACGATCAGTTTGTCTCTCTTTCATCTTTGCAAGAGGTTTTATCTGAAAAGGTTTACATCCTTTTCTTCTCCCGTACCAACCAAAGGTCGGTTAATGCTGCTTCAAATGGGGTAAAGTCTCAAAATTGTAATGGTCATGAAGCTTCCAAAAAACCAAAGCCTGCTCTTCCACCAAAAGGACCGCAACAAAAAAATTCTGAACAGTCTTCTTGGAAGGATATTTCTACTAAATCTCAGGTTGATAAAGTGCCTTCAGGCCCACGGATGAAGTTTAACATCAATGGAAACTTGAGCACCAAAAGAACTCCTGCAACTGATAATGGAAACATTGCTTACAAGAACCAATCTGTGGGATCAAATGGGGAGGTGAAGGACTCGGTTAGTTTGGACAAAAGTGAGAAAGCCAAGATGACTTTGATAAATGGGGATGGTTTGAACGGGAATATAACATCTGATACTGTTGAAGCTAACAACACCCAATCATTTTCTTCACCAATAGAAAATGGTAGTGTGGGTTCAGTGAAATCCGAACCCTCTGAAGTTACTGCTTCAGTGAAAACCAAACTCCCTGATCACTCTGAATTGGATAGCAGTGGTCCCAATGGTCACTCCATGGTCCTTGGGCCCAAAAGGAAATCTCGGGGTTCATGCATTTTGTTTGAACATGATGCTCAATCTCTGGAAAAAGTTGAAGAATTGAAGGCAGGTCTCAAGAAAGAAGCTCTCTCAGTTTTGCGCTCATGCGGTTGGGCAGATGAGGTTTTCAGTTTTATGCGTTCCCGGAAGAGGTTATGTGTAGATCAAGTTGAACTTACTCAGAATGGTGATGAAGCAAAGAAACTGTTGATCAGGGATTCCAAATCAACTTTTATTTCAAAGATACCTGAGTCTTTGAAGGGGGGCTTCATCAAACGTATTAAATCATTTAGCCAAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0022626 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

562

Amino Acids

61.95

Weight (kDa)

9.14

Isoelectric Point (pI)

50.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	18 - 273	1.1e-39	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	45 - 254	3.4e-12	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14400
fragaria_vesca	FvH4_3g16490 FvH4_3g16490 FvH4_3g16490 FvH4_3g16490
malus_domestica	MD05G1209600.v1.1 MD10G1195900.v1.1
prunus_persica	Prupe.4G147900_v2.0.a1
pyrus_communis	pycom05g19560 pycom10g16950
rosa_chinensis	RchiOBHm_Chr5g0027541
rosa_laevigata	RLG00000033025
rosa_multiflora	Rmu_co8326735.1_g000001 Rmu_co8467017.1_g000001 Rmu_sc0004493.1_g000008 Rmu_sc0007802.1_g000039 Rmu_sc0011056.1_g000009
rosa_roxburghii	Rroxscaffold_1G00052000 Rroxscaffold_1G00052020
rosa_rugosa	Rorug05G0099400 Rorug05G0099500 Rorug05G0099600
rosa_samantha	Rh5AG193700 Rh5BG191700 Rh5CG211900 Rh5DG193400 Rh5DG193600
rosa_wichuraiana	Rw5G017660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1445
AccB7I	CCANNNNNTGG	1 cut(s)	1099
AccBSI	CCGCTC	1 cut(s)	24
AciI	CCGC	4 cut(s)	22, 485, 932, 1494
AclWI	GGATC	4 cut(s)	45, 632, 645, 1111
AcoI	YGGCCR	2 cut(s)	208, 442
AcsI	RAATTY	2 cut(s)	128, 943
AcuI	CTGAAG	4 cut(s)	197, 987, 1284, 1308
AcvI	CACGTG	1 cut(s)	165
AcyI	GRCGYC	1 cut(s)	405
AfaI	GTAC	4 cut(s)	455, 667, 675, 826
AfiI	CCNNNNNNNGG	7 cut(s)	414, 698, 834, 838, 926, 1099, 1536
AflII	CTTAAG	1 cut(s)	539
AflIII	ACRYGT	1 cut(s)	162
AjiI	CACGTC	1 cut(s)	644
AjnI	CCWGG	1 cut(s)	309
AleI	CACNNNNGTG	1 cut(s)	275
AluBI	AGCT	9 cut(s)	72, 184, 299, 433, 615, 658, 893, 1217, 1472
AluI	AGCT	9 cut(s)	72, 184, 299, 433, 615, 658, 893, 1217, 1472
Alw21I	GWGCWC	1 cut(s)	1046
Alw26I	GTCTC	3 cut(s)	769, 873, 1463
AlwI	GGATC	4 cut(s)	45, 632, 645, 1111
Ama87I	CYCGRG	1 cut(s)	1389
AoxI	GGCC	5 cut(s)	208, 231, 442, 1006, 1373
ApaI	GGGCCC	1 cut(s)	1377
ApeKI	GCWGC	2 cut(s)	747, 848
ApoI	RAATTY	2 cut(s)	128, 943
Asp700I	GAANNNNTTC	2 cut(s)	83, 96
AspLEI	GCGC	3 cut(s)	55, 192, 1488
AspS9I	GGNCC	6 cut(s)	929, 1007, 1346, 1366, 1373, 1374
AsuC2I	CCSGG	2 cut(s)	261, 1531
AsuHPI	GGTGA	7 cut(s)	190, 289, 325, 681, 1129, 1233, 1586
AvaI	CYCGRG	1 cut(s)	1389
AvaII	GGWCC	3 cut(s)	929, 1346, 1366
BaeGI	GKGCMC	1 cut(s)	1377
BaeI	ACNNNNGTAYC	4 cut(s)	657, 690, 1622, 1655
BalI	TGGCCA	2 cut(s)	210, 444
BamHI	GGATCC	1 cut(s)	637
BanII	GRGCYC	1 cut(s)	1377
BbrPI	CACGTG	1 cut(s)	165
BbsI	GAAGAC	2 cut(s)	123, 948
Bbv12I	GWGCWC	1 cut(s)	1046
BbvI	GCAGC	2 cut(s)	734, 835
BccI	CCATC	4 cut(s)	274, 434, 724, 1172
BceAI	ACGGC	3 cut(s)	235, 253, 270
BciT130I	CCWGG	1 cut(s)	311
BclI	TGATCA	2 cut(s)	1321, 1596
BcnI	CCSGG	2 cut(s)	261, 1531
BcoDI	GTCTC	3 cut(s)	769, 873, 1463
BfaI	CTAG	2 cut(s)	47, 489
BfrI	CTTAAG	1 cut(s)	539
BfuAI	ACCTGC	1 cut(s)	1445
BisI	GCNGC	3 cut(s)	486, 748, 849
BlsI	GCNGC	3 cut(s)	487, 749, 850
Bme1390I	CCNGG	3 cut(s)	261, 311, 1531
Bme18I	GGWCC	3 cut(s)	929, 1346, 1366
BmeT110I	CYCGRG	1 cut(s)	1389
BmgBI	CACGTC	1 cut(s)	644
BmgT120I	GGNCC	6 cut(s)	929, 1007, 1346, 1366, 1373, 1374
BmiI	GGNNCC	4 cut(s)	258, 639, 1348, 1375
BmrFI	CCNGG	3 cut(s)	261, 311, 1531
BmsI	GCATC	4 cut(s)	40, 139, 715, 1408
BpiI	GAAGAC	2 cut(s)	123, 948
BpmI	CTGGAG	1 cut(s)	26
BpuEI	CTTGAG	3 cut(s)	49, 1060, 1445
BpuMI	CCSGG	2 cut(s)	261, 1531
BsaAI	YACGTR	1 cut(s)	165
BsaHI	GRCGYC	1 cut(s)	405
BsaI	GGTCTC	1 cut(s)	1463
BsaJI	CCNNGG	5 cut(s)	103, 260, 1010, 1362, 1369
Bsc4I	CCNNNNNNNGG	7 cut(s)	414, 698, 834, 838, 926, 1099, 1536
Bse118I	RCCGGY	1 cut(s)	55
Bse1I	ACTGG	1 cut(s)	424
Bse3DI	GCAATG	4 cut(s)	211, 229, 582, 1077
BseBI	CCWGG	1 cut(s)	311
BseDI	CCNNGG	5 cut(s)	103, 260, 1010, 1362, 1369
BseGI	GGATG	5 cut(s)	445, 730, 807, 1020, 1183
BseLI	CCNNNNNNNGG	7 cut(s)	414, 698, 834, 838, 926, 1099, 1536
BseMI	GCAATG	4 cut(s)	211, 229, 582, 1077
BseMII	CTCAG	7 cut(s)	55, 420, 684, 998, 1491, 1580, 1626
BseNI	ACTGG	1 cut(s)	424
BseSI	GKGCMC	1 cut(s)	1377
BseXI	GCAGC	2 cut(s)	734, 835
Bsh1285I	CGRYCG	1 cut(s)	109
BshFI	GGCC	5 cut(s)	210, 233, 444, 1008, 1375
BsiEI	CGRYCG	1 cut(s)	109
BsiHKAI	GWGCWC	1 cut(s)	1046
BsiHKCI	CYCGRG	1 cut(s)	1389
BsiSI	CCGG	4 cut(s)	56, 187, 260, 1531
BslFI	GGGAC	2 cut(s)	265, 1332
BslI	CCNNNNNNNGG	7 cut(s)	414, 698, 834, 838, 926, 1099, 1536
BsmAI	GTCTC	3 cut(s)	769, 873, 1463
BsmFI	GGGAC	2 cut(s)	265, 1332
BsnI	GGCC	5 cut(s)	210, 233, 444, 1008, 1375
Bso31I	GGTCTC	1 cut(s)	1463
BsoBI	CYCGRG	1 cut(s)	1389
Bsp120I	GGGCCC	1 cut(s)	1373
Bsp1286I	GDGCHC	2 cut(s)	1046, 1377
Bsp1407I	TGTACA	1 cut(s)	673
Bsp143I	GATC	7 cut(s)	37, 637, 754, 1103, 1321, 1549, 1596
Bsp19I	CCATGG	1 cut(s)	1362
BspACI	CCGC	4 cut(s)	22, 485, 932, 1494
BspANI	GGCC	5 cut(s)	210, 233, 444, 1008, 1375
BspCNI	CTCAG	7 cut(s)	54, 421, 685, 997, 1490, 1579, 1627
BspHI	TCATGA	2 cut(s)	124, 886
BspLI	GGNNCC	4 cut(s)	258, 639, 1348, 1375
BspMI	ACCTGC	1 cut(s)	1445
BspPI	GGATC	4 cut(s)	45, 632, 645, 1111
BspQI	GCTCTTC	1 cut(s)	921
BspTI	CTTAAG	1 cut(s)	539
BspTNI	GGTCTC	1 cut(s)	1463
BsrBI	CCGCTC	1 cut(s)	24
BsrDI	GCAATG	4 cut(s)	211, 229, 582, 1077
BsrFI	RCCGGY	1 cut(s)	55
BsrGI	TGTACA	1 cut(s)	673
BsrI	ACTGG	1 cut(s)	424
BssAI	RCCGGY	1 cut(s)	55
BssECI	CCNNGG	5 cut(s)	103, 260, 1010, 1362, 1369
BssMI	GATC	7 cut(s)	37, 637, 754, 1103, 1321, 1549, 1596
BssNI	GRCGYC	1 cut(s)	405
BssT1I	CCWWGG	2 cut(s)	1362, 1369
Bst2UI	CCWGG	1 cut(s)	311
Bst4CI	ACNGT	5 cut(s)	107, 274, 954, 1210, 1593
Bst6I	CTCTTC	3 cut(s)	588, 921, 1529
BstACI	GRCGYC	1 cut(s)	405
BstAFI	CTTAAG	1 cut(s)	539
BstAUI	TGTACA	1 cut(s)	673
BstBAI	YACGTR	1 cut(s)	165
BstC8I	GCNNGC	3 cut(s)	57, 154, 912
BstDEI	CTNAG	7 cut(s)	41, 429, 693, 984, 1477, 1566, 1635
BstDSI	CCRYGG	3 cut(s)	103, 1010, 1362
BstENI	CCTNNNNNAGG	1 cut(s)	412
BstF5I	GGATG	5 cut(s)	445, 730, 807, 1020, 1183
BstHHI	GCGC	3 cut(s)	55, 192, 1488
BstKTI	GATC	7 cut(s)	40, 640, 757, 1106, 1324, 1552, 1599
BstMAI	GTCTC	3 cut(s)	769, 873, 1463
BstMBI	GATC	7 cut(s)	37, 637, 754, 1103, 1321, 1549, 1596
BstMCI	CGRYCG	1 cut(s)	109
BstMWI	GCNNNNNNNGC	2 cut(s)	10, 621
BstNI	CCWGG	1 cut(s)	311
BstSCI	CCNGG	3 cut(s)	259, 309, 1529
BstSLI	GKGCMC	1 cut(s)	1377
BstV1I	GCAGC	2 cut(s)	734, 835
BstV2I	GAAGAC	2 cut(s)	123, 948
BstX2I	RGATCY	2 cut(s)	37, 637
BstYI	RGATCY	2 cut(s)	37, 637
BsuRI	GGCC	5 cut(s)	210, 233, 444, 1008, 1375
BtgI	CCRYGG	3 cut(s)	103, 1010, 1362
BtgZI	GCGATG	1 cut(s)	743
BtrI	CACGTC	1 cut(s)	644
BtsCI	GGATG	5 cut(s)	445, 730, 807, 1020, 1183
BtsI	GCAGTG	1 cut(s)	1348
BtsIMutI	CAGTG	4 cut(s)	270, 1275, 1308, 1348
BveI	ACCTGC	1 cut(s)	1445
Cac8I	GCNNGC	3 cut(s)	57, 154, 912
CciI	TCATGA	2 cut(s)	124, 886
CfoI	GCGC	3 cut(s)	55, 192, 1488
Cfr10I	RCCGGY	1 cut(s)	55
Cfr13I	GGNCC	6 cut(s)	929, 1007, 1346, 1366, 1373, 1374
CseI	GACGC	2 cut(s)	128, 413
Csp6I	GTAC	4 cut(s)	454, 666, 674, 825
CviAII	CATG	8 cut(s)	125, 212, 619, 887, 1363, 1398, 1415, 1491
CviQI	GTAC	4 cut(s)	454, 666, 674, 825
DdeI	CTNAG	7 cut(s)	41, 429, 693, 984, 1477, 1566, 1635
DpnI	GATC	7 cut(s)	39, 639, 756, 1105, 1323, 1551, 1598
DpnII	GATC	7 cut(s)	37, 637, 754, 1103, 1321, 1549, 1596
EaeI	YGGCCR	2 cut(s)	208, 442
Eam1104I	CTCTTC	3 cut(s)	588, 921, 1529
EarI	CTCTTC	3 cut(s)	588, 921, 1529
Eco130I	CCWWGG	2 cut(s)	1362, 1369
Eco24I	GRGCYC	1 cut(s)	1377
Eco31I	GGTCTC	1 cut(s)	1463
Eco47I	GGWCC	3 cut(s)	929, 1346, 1366
Eco57I	CTGAAG	4 cut(s)	197, 987, 1284, 1308
Eco72I	CACGTG	1 cut(s)	165
Eco88I	CYCGRG	1 cut(s)	1389
EcoNI	CCTNNNNNAGG	1 cut(s)	412
EcoRI	GAATTC	1 cut(s)	128
EcoRII	CCWGG	1 cut(s)	309
EcoT14I	CCWWGG	2 cut(s)	1362, 1369
EcoT22I	ATGCAT	2 cut(s)	715, 1403
EcoT38I	GRGCYC	1 cut(s)	1377
ErhI	CCWWGG	2 cut(s)	1362, 1369
FaeI	CATG	8 cut(s)	128, 215, 622, 890, 1366, 1401, 1418, 1494
FalI	AAGNNNNNCTT	4 cut(s)	1545, 1577, 1637, 1669
FaqI	GGGAC	2 cut(s)	265, 1332
FatI	CATG	8 cut(s)	124, 211, 618, 886, 1362, 1397, 1414, 1490
FbaI	TGATCA	2 cut(s)	1321, 1596
Fnu4HI	GCNGC	3 cut(s)	486, 748, 849
FokI	GGATG	5 cut(s)	452, 737, 794, 1027, 1190
FriOI	GRGCYC	1 cut(s)	1377
Fsp4HI	GCNGC	3 cut(s)	486, 748, 849
FspBI	CTAG	2 cut(s)	47, 489
GlaI	GCGC	3 cut(s)	54, 191, 1487
GluI	GCNGC	3 cut(s)	486, 748, 849
GsuI	CTGGAG	1 cut(s)	26
HaeIII	GGCC	5 cut(s)	210, 233, 444, 1008, 1375
HapII	CCGG	4 cut(s)	56, 187, 260, 1531
HgaI	GACGC	2 cut(s)	128, 413
HhaI	GCGC	3 cut(s)	55, 192, 1488
Hin1I	GRCGYC	1 cut(s)	405
Hin1II	CATG	8 cut(s)	128, 215, 622, 890, 1366, 1401, 1418, 1494
Hin6I	GCGC	3 cut(s)	53, 190, 1486
HinP1I	GCGC	3 cut(s)	53, 190, 1486
HindIII	AAGCTT	2 cut(s)	656, 891
HinfI	GANTC	6 cut(s)	64, 338, 695, 1124, 1604, 1637
HpaII	CCGG	4 cut(s)	56, 187, 260, 1531
HphI	GGTGA	7 cut(s)	190, 289, 325, 681, 1129, 1233, 1586
Hpy166II	GTNNAC	2 cut(s)	270, 805
Hpy188III	TCNNGA	9 cut(s)	47, 113, 125, 374, 635, 647, 887, 1430, 1462
Hpy8I	GTNNAC	2 cut(s)	270, 805
HpyAV	CCTTC	6 cut(s)	179, 958, 1011, 1114, 1444, 1639
HpyCH4III	ACNGT	5 cut(s)	107, 274, 954, 1210, 1593
HpyCH4IV	ACGT	4 cut(s)	141, 164, 643, 1663
HpyF10VI	GCNNNNNNNGC	2 cut(s)	10, 621
HpyF3I	CTNAG	7 cut(s)	41, 429, 693, 984, 1477, 1566, 1635
HpySE526I	ACGT	4 cut(s)	141, 164, 643, 1663
Hsp92I	GRCGYC	1 cut(s)	405
Hsp92II	CATG	8 cut(s)	128, 215, 622, 890, 1366, 1401, 1418, 1494
HspAI	GCGC	3 cut(s)	53, 190, 1486
KroI	GCCGGC	1 cut(s)	55
KroNI	GCCGGC	1 cut(s)	57
Ksp22I	TGATCA	2 cut(s)	1321, 1596
Kzo9I	GATC	7 cut(s)	37, 637, 754, 1103, 1321, 1549, 1596
LguI	GCTCTTC	1 cut(s)	921
LmnI	GCTCC	5 cut(s)	29, 69, 189, 262, 296
Lsp1109I	GCAGC	2 cut(s)	734, 835
LweI	GCATC	4 cut(s)	40, 139, 715, 1408
MaeI	CTAG	2 cut(s)	47, 489
MaeII	ACGT	4 cut(s)	141, 164, 643, 1663
MaeIII	GTNAC	4 cut(s)	137, 470, 1291, 1355
MalI	GATC	7 cut(s)	39, 639, 756, 1105, 1323, 1551, 1598
MbiI	CCGCTC	1 cut(s)	24
MboI	GATC	7 cut(s)	37, 637, 754, 1103, 1321, 1549, 1596
MflI	RGATCY	2 cut(s)	37, 637
MhlI	GDGCHC	2 cut(s)	1046, 1377
MlsI	TGGCCA	2 cut(s)	210, 444
MluCI	AATT	7 cut(s)	128, 391, 476, 874, 943, 1331, 1445
MluNI	TGGCCA	2 cut(s)	210, 444
MlyI	GAGTC	4 cut(s)	347, 704, 1118, 1646
MmeI	TCCRAC	1 cut(s)	559
MnlI	CCTC	7 cut(s)	3, 544, 778, 1108, 1294, 1501, 1530
Mox20I	TGGCCA	2 cut(s)	210, 444
Mph1103I	ATGCAT	2 cut(s)	715, 1403
MreI	CGCCGGCG	1 cut(s)	55
MroNI	GCCGGC	1 cut(s)	55
MroXI	GAANNNNTTC	2 cut(s)	83, 96
MscI	TGGCCA	2 cut(s)	210, 444
MseI	TTAA	6 cut(s)	399, 540, 720, 843, 1023, 1668
MslI	CAYNNNNRTG	2 cut(s)	275, 708
Msp20I	TGGCCA	2 cut(s)	210, 444
MspCI	CTTAAG	1 cut(s)	539
MspI	CCGG	4 cut(s)	56, 187, 260, 1531
MspR9I	CCNGG	3 cut(s)	261, 311, 1531
MvaI	CCWGG	1 cut(s)	311
MwoI	GCNNNNNNNGC	2 cut(s)	10, 621
NaeI	GCCGGC	1 cut(s)	57
NciI	CCSGG	2 cut(s)	261, 1531
NcoI	CCATGG	1 cut(s)	1362
NdeII	GATC	7 cut(s)	37, 637, 754, 1103, 1321, 1549, 1596
NgoMIV	GCCGGC	1 cut(s)	55
NlaIII	CATG	8 cut(s)	128, 215, 622, 890, 1366, 1401, 1418, 1494
NlaIV	GGNNCC	4 cut(s)	258, 639, 1348, 1375
NmuCI	GTSAC	1 cut(s)	1355
NsiI	ATGCAT	2 cut(s)	715, 1403
OliI	CACNNNNGTG	1 cut(s)	275
PagI	TCATGA	2 cut(s)	124, 886
PciSI	GCTCTTC	1 cut(s)	921
PcsI	WCGNNNNNNNCGW	1 cut(s)	106
PdiI	GCCGGC	1 cut(s)	57
PdmI	GAANNNNTTC	2 cut(s)	83, 96
PfeI	GAWTC	2 cut(s)	64, 1604
PflMI	CCANNNNNTGG	1 cut(s)	1099
PfoI	TCCNGGA	1 cut(s)	1529
PkrI	GCNGC	3 cut(s)	487, 749, 850
PleI	GAGTC	4 cut(s)	346, 703, 1118, 1645
PmaCI	CACGTG	1 cut(s)	165
PmlI	CACGTG	1 cut(s)	165
PpsI	GAGTC	4 cut(s)	346, 703, 1118, 1645
Ppu21I	YACGTR	1 cut(s)	165
Psp6I	CCWGG	1 cut(s)	309
PspCI	CACGTG	1 cut(s)	165
PspGI	CCWGG	1 cut(s)	309
PspN4I	GGNNCC	4 cut(s)	258, 639, 1348, 1375
PspOMI	GGGCCC	1 cut(s)	1373
PspPI	GGNCC	6 cut(s)	929, 1007, 1346, 1366, 1373, 1374
PsrI	GAACNNNNNNTAC	2 cut(s)	1249, 1281
PsuI	RGATCY	2 cut(s)	37, 637
RsaI	GTAC	4 cut(s)	455, 667, 675, 826
RsaNI	GTAC	4 cut(s)	454, 666, 674, 825
RseI	CAYNNNNRTG	2 cut(s)	275, 708
SapI	GCTCTTC	1 cut(s)	921
SaqAI	TTAA	6 cut(s)	399, 540, 720, 843, 1023, 1668
SatI	GCNGC	3 cut(s)	486, 748, 849
Sau3AI	GATC	7 cut(s)	37, 637, 754, 1103, 1321, 1549, 1596
Sau96I	GGNCC	6 cut(s)	929, 1007, 1346, 1366, 1373, 1374
SchI	GAGTC	4 cut(s)	347, 704, 1118, 1646
ScrFI	CCNGG	3 cut(s)	261, 311, 1531
SduI	GDGCHC	2 cut(s)	1046, 1377
SfaNI	GCATC	4 cut(s)	40, 139, 715, 1408
SgrAI	CRCCGGYG	1 cut(s)	55
SinI	GGWCC	3 cut(s)	929, 1346, 1366
SmiMI	CAYNNNNRTG	2 cut(s)	275, 708
SmlI	CTYRAG	4 cut(s)	28, 539, 1039, 1460
SmoI	CTYRAG	4 cut(s)	28, 539, 1039, 1460
Sse9I	AATT	7 cut(s)	128, 391, 476, 874, 943, 1331, 1445
SsiI	CCGC	4 cut(s)	22, 485, 932, 1494
SspI	AATATT	1 cut(s)	82
SspMI	CTAG	2 cut(s)	47, 489
StyD4I	CCNGG	3 cut(s)	259, 309, 1529
StyI	CCWWGG	2 cut(s)	1362, 1369
TaaI	ACNGT	5 cut(s)	107, 274, 954, 1210, 1593
TaiI	ACGT	4 cut(s)	144, 167, 646, 1666
TaqI	TCGA	2 cut(s)	503, 611
TasI	AATT	7 cut(s)	128, 391, 476, 874, 943, 1331, 1445
TatI	WGTACW	2 cut(s)	453, 673
TauI	GCSGC	1 cut(s)	488
TfiI	GAWTC	2 cut(s)	64, 1604
Tru1I	TTAA	6 cut(s)	399, 540, 720, 843, 1023, 1668
Tru9I	TTAA	6 cut(s)	399, 540, 720, 843, 1023, 1668
TscAI	CASTG	4 cut(s)	277, 1275, 1308, 1348
TseFI	GTSAC	1 cut(s)	1355
TseI	GCWGC	2 cut(s)	747, 848
Tsp45I	GTSAC	1 cut(s)	1355
TspDTI	ATGAA	8 cut(s)	141, 607, 762, 903, 1031, 1386, 1593, 1645
TspGWI	ACGGA	1 cut(s)	1027
TspRI	CASTG	4 cut(s)	277, 1275, 1308, 1348
Van91I	CCANNNNNTGG	1 cut(s)	1099
Vha464I	CTTAAG	1 cut(s)	539
VpaK11BI	GGWCC	3 cut(s)	929, 1346, 1366
XagI	CCTNNNNNAGG	1 cut(s)	412
XapI	RAATTY	2 cut(s)	128, 943
XbaI	TCTAGA	1 cut(s)	46
XcmI	CCANNNNNNNNNTGG	1 cut(s)	277
XmnI	GAANNNNTTC	2 cut(s)	83, 96
XspI	CTAG	2 cut(s)	47, 489
Zsp2I	ATGCAT	2 cut(s)	715, 1403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.