Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005652

Physical Location & Seq

Genomic Coordinates Reverse (-)

21530736 .. 21536520

Gene Structure 5785 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG193600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGGGCCTGCAATTTCAATTGCAGATGAGTTGGCAGCCGAGTCTACTGAATCAGAAGCGGAAGACAGGCCCGCCTCTAGGGTTGAAGAACCTCGGCAACTCTTGCTACCTCAACAGCGTCCTTCAGTGCCTCACCTACACCCCTCCTCTCGCCAATTTCTGCCTCCGAAACCAGCACTCCTCCCTCTGTGACTCTTCCGACAAGGAACGCAAGCGCGAGTGTCCGTTCTGCATGCTGGAGAGGCGAATAGTCCGCTCCCTCAGTGTGGATCTCAGTCTAGATGCGCCGGCCAAGATTCGGAGCTGTCTGAATATTTTCGCCGAACACTTTCGCCACGGTCGTCAGGAAGACGCTCATGAGTTCCTGCGTTACGTTATTGATGCTTGCCACAACACTTGCCTTCGCCTGAAGAAGCTTCGGCGCAACATCACCGGCAATGGTTTGTCCAACGGCAACGGCCACGCCAACGGGAATGGTCAGGCCAACGGCAAAGCCAATGGGACGGCTCCGGCGTCGTCCACGGTGGTGATGGAGATATTCGGGGGAGCTATGCAGAGCCAGGTGAAGTGTCTATCCTGTGGCACAGAGTCCAATAAGGTTGATGAGATAATGGATATTAGTCTTGATGTTTTGCATAGTAATTCGCTTAAAGACGCCTTGCAAAGGTTCTTCCAGTCTGAGCTTTTGGATGGCCAAAACAAGTACAAGTGCGAAAGATGTAACAAATTGGTGGCGGCTAGGAAGCAAATGTCTATACTTCAAGCACCTAATGTTCTTGTAATCCAACTTAAGAGATTTGAGGGTCTATTGGGTGGGAAGATTGATAAATCCATTGCATTTGAAGAGTTTTTGGTGCTGTCGAGCTTCATGTGCAAAACAAGTCAGGATCCACGTCCAGAATATAAGCTTTGTGGTACTATTGTGCATTCTGGTTTTTCACCCGAGTCTGGTCATTATTATGCATATATTAAGGATGCGATGGGTCGTTGGTATTGCTGCAACGATCAGTTTGTCTCTCTTTCAACTTTGCAAGAGGTCTTATCTGAAAAGGTTTACATCCTTTTCTTCTCCCGTACCAACCAAAGGTCGGTTAATGCTGCTTCAAATGGGTTAAGGTCTCAAAATTGTAATGGTCATGAAGCTTCCAAAAAACCGAAGCCTGCTCTTCCACCAAAAGGACCACAAATAAAAATTTATGAACAGTCTTCTTGGAAGGATATTTCTACTAAATCTCAGGTTGATAAAGTGCCTTCAGGCCCACGGATGAAGTTTAACATCAATGGAAACTTGAGCACCAAAAGAACTCCTGCAACTGATAATGGAAACATTGCTTACAAGAACCAATCTGTGGGATCAAATGGGGAGGTGAAGGACTCGGTTAGTTTGGACAAAAGTGAGAAAGCCAAGATGACTTTGATAAATGGGGATGGTTTGAACGGGAATATAACATCTGATACTGTTGAAGCTAACAACACCCAACCATTTTCTTCACCAATAGAAAATGGTAGTGTGGGTTCAGTGAAATCCGAACTCTCTGAAGTAACTGCTTCAGTGAAAACCGAACTCCCTGATCACTCTGAATTGGATAGCAGTGGTCCCAAAGGTCACTCCATGGTCCTTGGGCCCAAAAGGAAATCTCGGGATTCATGCATTTTGTTTGAACATGATGCTCAATCTCTGGAAAAAGTTGAAGAATTGAAGGCAGGGTATGTGATACTCTTTTACCTTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0022626 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

577

Amino Acids

63.83

Weight (kDa)

8.91

Isoelectric Point (pI)

54.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	27 - 356	1e-55	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	27 - 337	2.4e-18	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14400
fragaria_vesca	FvH4_3g16490 FvH4_3g16490 FvH4_3g16490 FvH4_3g16490
malus_domestica	MD05G1209600.v1.1 MD10G1195900.v1.1
prunus_persica	Prupe.4G147900_v2.0.a1
pyrus_communis	pycom05g19560 pycom10g16950
rosa_chinensis	RchiOBHm_Chr5g0027541
rosa_laevigata	RLG00000033025
rosa_multiflora	Rmu_co8326735.1_g000001 Rmu_co8467017.1_g000001 Rmu_sc0004493.1_g000008 Rmu_sc0007802.1_g000039 Rmu_sc0011056.1_g000009
rosa_roxburghii	Rroxscaffold_1G00052000 Rroxscaffold_1G00052020
rosa_rugosa	Rorug05G0099400 Rorug05G0099500 Rorug05G0099600
rosa_samantha	Rh5AG193700 Rh5BG191700 Rh5CG211900 Rh5DG193400 Rh5DG193600
rosa_wichuraiana	Rw5G017660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1348
AccBSI	CCGCTC	1 cut(s)	255
AccI	GTMKAC	1 cut(s)	43
AccII	CGCG	1 cut(s)	216
AciI	CCGC	4 cut(s)	58, 71, 253, 734
AclWI	GGATC	4 cut(s)	276, 881, 894, 1360
AcoI	YGGCCR	3 cut(s)	288, 457, 691
AcsI	RAATTY	1 cut(s)	1191
AcuI	CTGAAG	5 cut(s)	107, 428, 1236, 1533, 1557
AcyI	GRCGYC	2 cut(s)	512, 654
AfaI	GTAC	3 cut(s)	704, 916, 1075
AfiI	CCNNNNNNNGG	9 cut(s)	77, 265, 297, 663, 947, 1083, 1087, 1175, 1348
AflII	CTTAAG	1 cut(s)	788
AjiI	CACGTC	1 cut(s)	893
AjnI	CCWGG	1 cut(s)	558
AleI	CACNNNNGTG	1 cut(s)	524
AluBI	AGCT	8 cut(s)	303, 415, 548, 682, 864, 907, 1142, 1466
AluI	AGCT	8 cut(s)	303, 415, 548, 682, 864, 907, 1142, 1466
Alw21I	GWGCWC	1 cut(s)	1295
Alw26I	GTCTC	2 cut(s)	1018, 1122
AlwI	GGATC	4 cut(s)	276, 881, 894, 1360
Ama87I	CYCGRG	2 cut(s)	941, 1638
AoxI	GGCC	8 cut(s)	4, 67, 288, 457, 480, 691, 1255, 1622
ApaI	GGGCCC	1 cut(s)	1626
ApeKI	GCWGC	3 cut(s)	34, 996, 1097
ApoI	RAATTY	1 cut(s)	1191
Asp700I	GAANNNNTTC	2 cut(s)	314, 327
AspLEI	GCGC	3 cut(s)	216, 286, 423
AspS9I	GGNCC	8 cut(s)	4, 68, 1178, 1256, 1595, 1615, 1622, 1623
AsuHPI	GGTGA	7 cut(s)	124, 421, 538, 574, 930, 1378, 1482
AvaI	CYCGRG	2 cut(s)	941, 1638
AvaII	GGWCC	3 cut(s)	1178, 1595, 1615
BaeGI	GKGCMC	1 cut(s)	1626
BaeI	ACNNNNGTAYC	2 cut(s)	906, 939
BalI	TGGCCA	1 cut(s)	693
BamHI	GGATCC	1 cut(s)	886
BanII	GRGCYC	1 cut(s)	1626
BbsI	GAAGAC	3 cut(s)	68, 354, 1197
Bbv12I	GWGCWC	1 cut(s)	1295
BbvI	GCAGC	3 cut(s)	46, 983, 1084
BccI	CCATC	4 cut(s)	523, 683, 973, 1421
BceAI	ACGGC	4 cut(s)	466, 472, 502, 519
BciT130I	CCWGG	1 cut(s)	560
BclI	TGATCA	1 cut(s)	1570
BcoDI	GTCTC	2 cut(s)	1018, 1122
BfaI	CTAG	3 cut(s)	77, 278, 738
BfrI	CTTAAG	1 cut(s)	788
BisI	GCNGC	4 cut(s)	35, 735, 997, 1098
BlsI	GCNGC	4 cut(s)	36, 736, 998, 1099
Bme1390I	CCNGG	1 cut(s)	560
Bme18I	GGWCC	3 cut(s)	1178, 1595, 1615
BmeT110I	CYCGRG	2 cut(s)	941, 1638
BmgBI	CACGTC	1 cut(s)	893
BmgT120I	GGNCC	8 cut(s)	4, 68, 1178, 1256, 1595, 1615, 1622, 1623
BmiI	GGNNCC	4 cut(s)	507, 888, 1597, 1624
BmrFI	CCNGG	1 cut(s)	560
BmsI	GCATC	4 cut(s)	271, 370, 964, 1657
BpiI	GAAGAC	3 cut(s)	68, 354, 1197
BpmI	CTGGAG	1 cut(s)	257
BpuEI	CTTGAG	1 cut(s)	1309
BsaHI	GRCGYC	2 cut(s)	512, 654
BsaI	GGTCTC	1 cut(s)	1122
BsaJI	CCNNGG	6 cut(s)	91, 334, 519, 1259, 1611, 1618
BsaXI	ACNNNNNCTCC	2 cut(s)	161, 191
Bsc4I	CCNNNNNNNGG	9 cut(s)	77, 265, 297, 663, 947, 1083, 1087, 1175, 1348
Bse118I	RCCGGY	2 cut(s)	286, 431
Bse1I	ACTGG	1 cut(s)	673
Bse3DI	GCAATG	3 cut(s)	442, 831, 1326
BseBI	CCWGG	1 cut(s)	560
BseDI	CCNNGG	6 cut(s)	91, 334, 519, 1259, 1611, 1618
BseGI	GGATG	5 cut(s)	694, 979, 1056, 1269, 1432
BseLI	CCNNNNNNNGG	9 cut(s)	77, 265, 297, 663, 947, 1083, 1087, 1175, 1348
BseMI	GCAATG	3 cut(s)	442, 831, 1326
BseMII	CTCAG	4 cut(s)	274, 286, 669, 1247
BseNI	ACTGG	1 cut(s)	673
BseRI	GAGGAG	2 cut(s)	135, 169
BseSI	GKGCMC	1 cut(s)	1626
BseXI	GCAGC	3 cut(s)	46, 983, 1084
Bsh1236I	CGCG	1 cut(s)	216
Bsh1285I	CGRYCG	1 cut(s)	340
BshFI	GGCC	8 cut(s)	6, 69, 290, 459, 482, 693, 1257, 1624
BsiEI	CGRYCG	1 cut(s)	340
BsiHKAI	GWGCWC	1 cut(s)	1295
BsiHKCI	CYCGRG	2 cut(s)	941, 1638
BsiSI	CCGG	3 cut(s)	287, 432, 509
BslFI	GGGAC	2 cut(s)	514, 1581
BslI	CCNNNNNNNGG	9 cut(s)	77, 265, 297, 663, 947, 1083, 1087, 1175, 1348
BsmAI	GTCTC	2 cut(s)	1018, 1122
BsmFI	GGGAC	2 cut(s)	514, 1581
BsmI	GAATGC	1 cut(s)	925
BsnI	GGCC	8 cut(s)	6, 69, 290, 459, 482, 693, 1257, 1624
Bso31I	GGTCTC	1 cut(s)	1122
BsoBI	CYCGRG	2 cut(s)	941, 1638
Bsp120I	GGGCCC	1 cut(s)	1622
Bsp1286I	GDGCHC	2 cut(s)	1295, 1626
Bsp143I	GATC	5 cut(s)	268, 886, 1003, 1352, 1570
Bsp19I	CCATGG	1 cut(s)	1611
BspACI	CCGC	4 cut(s)	58, 71, 253, 734
BspANI	GGCC	8 cut(s)	6, 69, 290, 459, 482, 693, 1257, 1624
BspCNI	CTCAG	4 cut(s)	273, 285, 670, 1246
BspFNI	CGCG	1 cut(s)	216
BspHI	TCATGA	2 cut(s)	355, 1135
BspLI	GGNNCC	4 cut(s)	507, 888, 1597, 1624
BspPI	GGATC	4 cut(s)	276, 881, 894, 1360
BspQI	GCTCTTC	1 cut(s)	1170
BspTI	CTTAAG	1 cut(s)	788
BspTNI	GGTCTC	1 cut(s)	1122
BsrBI	CCGCTC	1 cut(s)	255
BsrDI	GCAATG	3 cut(s)	442, 831, 1326
BsrFI	RCCGGY	2 cut(s)	286, 431
BsrI	ACTGG	1 cut(s)	673
BssAI	RCCGGY	2 cut(s)	286, 431
BssECI	CCNNGG	6 cut(s)	91, 334, 519, 1259, 1611, 1618
BssMI	GATC	5 cut(s)	268, 886, 1003, 1352, 1570
BssNI	GRCGYC	2 cut(s)	512, 654
BssT1I	CCWWGG	2 cut(s)	1611, 1618
Bst2UI	CCWGG	1 cut(s)	560
Bst4CI	ACNGT	4 cut(s)	338, 523, 1203, 1459
Bst6I	CTCTTC	3 cut(s)	199, 837, 1170
BstACI	GRCGYC	2 cut(s)	512, 654
BstAFI	CTTAAG	1 cut(s)	788
BstAPI	GCANNNNNTGC	1 cut(s)	102
BstC8I	GCNNGC	7 cut(s)	8, 71, 212, 233, 288, 385, 1161
BstDEI	CTNAG	4 cut(s)	260, 272, 678, 1233
BstDSI	CCRYGG	4 cut(s)	334, 519, 1259, 1611
BstENI	CCTNNNNNAGG	1 cut(s)	661
BstF5I	GGATG	5 cut(s)	694, 979, 1056, 1269, 1432
BstFNI	CGCG	1 cut(s)	216
BstHHI	GCGC	3 cut(s)	216, 286, 423
BstKTI	GATC	5 cut(s)	271, 889, 1006, 1355, 1573
BstMAI	GTCTC	2 cut(s)	1018, 1122
BstMBI	GATC	5 cut(s)	268, 886, 1003, 1352, 1570
BstMCI	CGRYCG	1 cut(s)	340
BstMWI	GCNNNNNNNGC	3 cut(s)	102, 241, 870
BstNI	CCWGG	1 cut(s)	560
BstNSI	RCATGY	1 cut(s)	235
BstSCI	CCNGG	1 cut(s)	558
BstSLI	GKGCMC	1 cut(s)	1626
BstUI	CGCG	1 cut(s)	216
BstV1I	GCAGC	3 cut(s)	46, 983, 1084
BstV2I	GAAGAC	3 cut(s)	68, 354, 1197
BstX2I	RGATCY	2 cut(s)	268, 886
BstYI	RGATCY	2 cut(s)	268, 886
BsuRI	GGCC	8 cut(s)	6, 69, 290, 459, 482, 693, 1257, 1624
BtgI	CCRYGG	4 cut(s)	334, 519, 1259, 1611
BtgZI	GCGATG	1 cut(s)	992
BtrI	CACGTC	1 cut(s)	893
BtsCI	GGATG	5 cut(s)	694, 979, 1056, 1269, 1432
BtsI	GCAGTG	1 cut(s)	1597
BtsIMutI	CAGTG	5 cut(s)	131, 268, 1524, 1557, 1597
Cac8I	GCNNGC	7 cut(s)	8, 71, 212, 233, 288, 385, 1161
CciI	TCATGA	2 cut(s)	355, 1135
CfoI	GCGC	3 cut(s)	216, 286, 423
Cfr10I	RCCGGY	2 cut(s)	286, 431
Cfr13I	GGNCC	8 cut(s)	4, 68, 1178, 1256, 1595, 1615, 1622, 1623
CseI	GACGC	4 cut(s)	106, 359, 501, 662
Csp6I	GTAC	3 cut(s)	703, 915, 1074
CspCI	CAANNNNNGTGG	2 cut(s)	377, 412
CviAII	CATG	7 cut(s)	232, 356, 868, 1136, 1612, 1647, 1664
CviQI	GTAC	3 cut(s)	703, 915, 1074
DdeI	CTNAG	4 cut(s)	260, 272, 678, 1233
DpnI	GATC	5 cut(s)	270, 888, 1005, 1354, 1572
DpnII	GATC	5 cut(s)	268, 886, 1003, 1352, 1570
EaeI	YGGCCR	3 cut(s)	288, 457, 691
Eam1104I	CTCTTC	3 cut(s)	199, 837, 1170
EarI	CTCTTC	3 cut(s)	199, 837, 1170
Eco130I	CCWWGG	2 cut(s)	1611, 1618
Eco24I	GRGCYC	1 cut(s)	1626
Eco31I	GGTCTC	1 cut(s)	1122
Eco47I	GGWCC	3 cut(s)	1178, 1595, 1615
Eco57I	CTGAAG	5 cut(s)	107, 428, 1236, 1533, 1557
Eco88I	CYCGRG	2 cut(s)	941, 1638
EcoNI	CCTNNNNNAGG	1 cut(s)	661
EcoRII	CCWGG	1 cut(s)	558
EcoT14I	CCWWGG	2 cut(s)	1611, 1618
EcoT22I	ATGCAT	2 cut(s)	964, 1652
EcoT38I	GRGCYC	1 cut(s)	1626
ErhI	CCWWGG	2 cut(s)	1611, 1618
FaeI	CATG	7 cut(s)	235, 359, 871, 1139, 1615, 1650, 1667
FaqI	GGGAC	2 cut(s)	514, 1581
FatI	CATG	7 cut(s)	231, 355, 867, 1135, 1611, 1646, 1663
FauI	CCCGC	1 cut(s)	78
FbaI	TGATCA	1 cut(s)	1570
FblI	GTMKAC	1 cut(s)	43
Fnu4HI	GCNGC	4 cut(s)	35, 735, 997, 1098
FokI	GGATG	5 cut(s)	701, 986, 1043, 1276, 1439
FriOI	GRGCYC	1 cut(s)	1626
Fsp4HI	GCNGC	4 cut(s)	35, 735, 997, 1098
FspBI	CTAG	3 cut(s)	77, 278, 738
GlaI	GCGC	3 cut(s)	215, 285, 422
GluI	GCNGC	4 cut(s)	35, 735, 997, 1098
GsuI	CTGGAG	1 cut(s)	257
HaeIII	GGCC	8 cut(s)	6, 69, 290, 459, 482, 693, 1257, 1624
HapII	CCGG	3 cut(s)	287, 432, 509
HgaI	GACGC	4 cut(s)	106, 359, 501, 662
HhaI	GCGC	3 cut(s)	216, 286, 423
Hin1I	GRCGYC	2 cut(s)	512, 654
Hin1II	CATG	7 cut(s)	235, 359, 871, 1139, 1615, 1650, 1667
Hin6I	GCGC	3 cut(s)	214, 284, 421
HinP1I	GCGC	3 cut(s)	214, 284, 421
HindIII	AAGCTT	3 cut(s)	413, 905, 1140
HinfI	GANTC	8 cut(s)	40, 49, 191, 295, 587, 944, 1373, 1643
HpaII	CCGG	3 cut(s)	287, 432, 509
HphI	GGTGA	7 cut(s)	124, 421, 538, 574, 930, 1378, 1482
Hpy166II	GTNNAC	3 cut(s)	44, 519, 1054
Hpy188III	TCNNGA	9 cut(s)	278, 344, 356, 623, 884, 896, 1136, 1640, 1679
Hpy8I	GTNNAC	3 cut(s)	44, 519, 1054
Hpy99I	CGWCG	1 cut(s)	517
HpyAV	CCTTC	6 cut(s)	131, 410, 1207, 1260, 1363, 1693
HpyCH4III	ACNGT	4 cut(s)	338, 523, 1203, 1459
HpyCH4IV	ACGT	2 cut(s)	372, 892
HpyF10VI	GCNNNNNNNGC	3 cut(s)	102, 241, 870
HpyF3I	CTNAG	4 cut(s)	260, 272, 678, 1233
HpySE526I	ACGT	2 cut(s)	372, 892
Hsp92I	GRCGYC	2 cut(s)	512, 654
Hsp92II	CATG	7 cut(s)	235, 359, 871, 1139, 1615, 1650, 1667
HspAI	GCGC	3 cut(s)	214, 284, 421
KroI	GCCGGC	1 cut(s)	286
KroNI	GCCGGC	1 cut(s)	288
Ksp22I	TGATCA	1 cut(s)	1570
Kzo9I	GATC	5 cut(s)	268, 886, 1003, 1352, 1570
LguI	GCTCTTC	1 cut(s)	1170
LmnI	GCTCC	4 cut(s)	260, 300, 511, 545
Lsp1109I	GCAGC	3 cut(s)	46, 983, 1084
LweI	GCATC	4 cut(s)	271, 370, 964, 1657
MaeI	CTAG	3 cut(s)	77, 278, 738
MaeII	ACGT	2 cut(s)	372, 892
MaeIII	GTNAC	5 cut(s)	188, 368, 719, 1540, 1604
MalI	GATC	5 cut(s)	270, 888, 1005, 1354, 1572
MbiI	CCGCTC	1 cut(s)	255
MboI	GATC	5 cut(s)	268, 886, 1003, 1352, 1570
MfeI	CAATTG	1 cut(s)	17
MflI	RGATCY	2 cut(s)	268, 886
MhlI	GDGCHC	2 cut(s)	1295, 1626
MlsI	TGGCCA	1 cut(s)	693
MluCI	AATT	9 cut(s)	11, 17, 154, 640, 725, 1123, 1191, 1580, 1694
MluNI	TGGCCA	1 cut(s)	693
MlyI	GAGTC	5 cut(s)	49, 185, 596, 953, 1367
MmeI	TCCRAC	3 cut(s)	222, 471, 808
Mox20I	TGGCCA	1 cut(s)	693
Mph1103I	ATGCAT	2 cut(s)	964, 1652
MroNI	GCCGGC	1 cut(s)	286
MroXI	GAANNNNTTC	2 cut(s)	314, 327
MscI	TGGCCA	1 cut(s)	693
MseI	TTAA	6 cut(s)	648, 789, 969, 1092, 1112, 1272
MslI	CAYNNNNRTG	2 cut(s)	524, 957
Msp20I	TGGCCA	1 cut(s)	693
MspCI	CTTAAG	1 cut(s)	788
MspI	CCGG	3 cut(s)	287, 432, 509
MspR9I	CCNGG	1 cut(s)	560
MunI	CAATTG	1 cut(s)	17
Mva1269I	GAATGC	1 cut(s)	925
MvaI	CCWGG	1 cut(s)	560
MvnI	CGCG	1 cut(s)	216
MwoI	GCNNNNNNNGC	3 cut(s)	102, 241, 870
NaeI	GCCGGC	1 cut(s)	288
NcoI	CCATGG	1 cut(s)	1611
NdeII	GATC	5 cut(s)	268, 886, 1003, 1352, 1570
NgoMIV	GCCGGC	1 cut(s)	286
NlaIII	CATG	7 cut(s)	235, 359, 871, 1139, 1615, 1650, 1667
NlaIV	GGNNCC	4 cut(s)	507, 888, 1597, 1624
NmeAIII	GCCGAG	2 cut(s)	63, 72
NmuCI	GTSAC	2 cut(s)	188, 1604
NsiI	ATGCAT	2 cut(s)	964, 1652
NspI	RCATGY	1 cut(s)	235
OliI	CACNNNNGTG	1 cut(s)	524
PaeI	GCATGC	1 cut(s)	235
PagI	TCATGA	2 cut(s)	355, 1135
PciSI	GCTCTTC	1 cut(s)	1170
PcsI	WCGNNNNNNNCGW	2 cut(s)	337, 509
PctI	GAATGC	1 cut(s)	925
PdiI	GCCGGC	1 cut(s)	288
PdmI	GAANNNNTTC	2 cut(s)	314, 327
PfeI	GAWTC	3 cut(s)	49, 295, 1643
PflMI	CCANNNNNTGG	1 cut(s)	1348
PkrI	GCNGC	4 cut(s)	36, 736, 998, 1099
PleI	GAGTC	5 cut(s)	48, 185, 595, 952, 1367
PpsI	GAGTC	5 cut(s)	48, 185, 595, 952, 1367
Psp6I	CCWGG	1 cut(s)	558
PspGI	CCWGG	1 cut(s)	558
PspN4I	GGNNCC	4 cut(s)	507, 888, 1597, 1624
PspOMI	GGGCCC	1 cut(s)	1622
PspPI	GGNCC	8 cut(s)	4, 68, 1178, 1256, 1595, 1615, 1622, 1623
PsrI	GAACNNNNNNTAC	2 cut(s)	1498, 1530
PsuI	RGATCY	2 cut(s)	268, 886
RsaI	GTAC	3 cut(s)	704, 916, 1075
RsaNI	GTAC	3 cut(s)	703, 915, 1074
RseI	CAYNNNNRTG	2 cut(s)	524, 957
SapI	GCTCTTC	1 cut(s)	1170
SaqAI	TTAA	6 cut(s)	648, 789, 969, 1092, 1112, 1272
SatI	GCNGC	4 cut(s)	35, 735, 997, 1098
Sau3AI	GATC	5 cut(s)	268, 886, 1003, 1352, 1570
Sau96I	GGNCC	8 cut(s)	4, 68, 1178, 1256, 1595, 1615, 1622, 1623
SchI	GAGTC	5 cut(s)	49, 185, 596, 953, 1367
ScrFI	CCNGG	1 cut(s)	560
SduI	GDGCHC	2 cut(s)	1295, 1626
SfaNI	GCATC	4 cut(s)	271, 370, 964, 1657
SinI	GGWCC	3 cut(s)	1178, 1595, 1615
SmiMI	CAYNNNNRTG	2 cut(s)	524, 957
SmlI	CTYRAG	2 cut(s)	788, 1288
SmoI	CTYRAG	2 cut(s)	788, 1288
SphI	GCATGC	1 cut(s)	235
Sse9I	AATT	9 cut(s)	11, 17, 154, 640, 725, 1123, 1191, 1580, 1694
SsiI	CCGC	4 cut(s)	58, 71, 253, 734
SspI	AATATT	1 cut(s)	313
SspMI	CTAG	3 cut(s)	77, 278, 738
StyD4I	CCNGG	1 cut(s)	558
StyI	CCWWGG	2 cut(s)	1611, 1618
TaaI	ACNGT	4 cut(s)	338, 523, 1203, 1459
TaiI	ACGT	2 cut(s)	375, 895
TaqI	TCGA	1 cut(s)	860
TasI	AATT	9 cut(s)	11, 17, 154, 640, 725, 1123, 1191, 1580, 1694
TatI	WGTACW	1 cut(s)	702
TauI	GCSGC	1 cut(s)	737
TfiI	GAWTC	3 cut(s)	49, 295, 1643
Tru1I	TTAA	6 cut(s)	648, 789, 969, 1092, 1112, 1272
Tru9I	TTAA	6 cut(s)	648, 789, 969, 1092, 1112, 1272
TscAI	CASTG	5 cut(s)	131, 268, 1524, 1557, 1597
TseFI	GTSAC	2 cut(s)	188, 1604
TseI	GCWGC	3 cut(s)	34, 996, 1097
Tsp45I	GTSAC	2 cut(s)	188, 1604
TspDTI	ATGAA	6 cut(s)	856, 1152, 1212, 1280, 1635, 1718
TspGWI	ACGGA	2 cut(s)	213, 1276
TspRI	CASTG	5 cut(s)	131, 268, 1524, 1557, 1597
Van91I	CCANNNNNTGG	1 cut(s)	1348
Vha464I	CTTAAG	1 cut(s)	788
VpaK11BI	GGWCC	3 cut(s)	1178, 1595, 1615
XagI	CCTNNNNNAGG	1 cut(s)	661
XapI	RAATTY	1 cut(s)	1191
XbaI	TCTAGA	1 cut(s)	277
XceI	RCATGY	1 cut(s)	235
XcmI	CCANNNNNNNNNTGG	1 cut(s)	526
XmiI	GTMKAC	1 cut(s)	43
XmnI	GAANNNNTTC	2 cut(s)	314, 327
XspI	CTAG	3 cut(s)	77, 278, 738
Zsp2I	ATGCAT	2 cut(s)	964, 1652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.