Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0005652

Physical Location & Seq

Genomic Coordinates Reverse (-)

22562249 .. 22568558

Gene Structure 6310 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G017660.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGGGCCTGCAATTTCAATTGCAGATGAGTTGGCAGCCGAGTCTACTGAATCAGAAGCGGAAGACAGGCCCGCCTCTAGGGTTGAAGAACCTCGGCAACTCTTGCTACCTCAACAGCGTCCTTCAGTGCCTCACCTACACCCCTCCTCTGGCCAATTTCTGCCTCCGAAACCAGCACTCCTCCCTCTGTGACTCTTCCGACAAAGAACGGAAGCGCGAGTGTCCGTTTTGCATGCTGGAGAGGCGAATAGTCCGCTCCTTGAGTGTGGATCTCAGTCTAGATGCGCCGGCGAAGATTCGGAGCTGTCTGAATATTTTCGCCGAACACTTTCGCCACGGTCGTCAGGAAGACGCTCATGAATTCCTGCGTTACGTTATTGATGCTTGCCACAACACGTGCCTTCGCCTGAAGAAGCTCCGGCGCAACATCACCAGCAATGGCCATGCCAACGGCAATGGTCAGGCCAACGGCAAAGCCAATGGGACGGCTCCGGGGTCGTCCACTGTGGTGATGGAGATTTTCGGGGGAGCTTTGCAGAGCCAGGTGAAGTGTCTATCCTGTGGCACAGAGTCCAATAAGGTTGATGAGATAATGGATATTAGTCTTGATGTTTTGCATAGTAATTCACTTAAAGACGCCTTGCAAAGGTTCTTCCAGTCTGAGCTTTTGGATGGCCAGAACAAGTACAAGTGTGAAAGATGTAACAAATTGGTGGCGGCTAGGAAGCAGATGTCGATACTTCAAGCACCTAATGTTCTTGTAATCCAACTTAAGAGATTTGAGGGTCTATTGGGTGGGAAGATTGATAAATCCATTGCATTTGAAGAGTTTTTGGTGCTGTCGAGCTTCATGTGCAAAACAAGTCAGGATCCACGTCCAGAATATAAGCTTTGTGGTACTATTGTACATTCTGGTTTTTCACCTGAGTCTGGTCATTATTATGCATATATTAAGGATGCGATGGGTCGTTGGTATTGCTGCAACGATCAGTTTGTCTCTCTTTCATCTTTGCAAGAGGTTTTATCTGAAAAGGTTTACATCCTTTTCTTCTCCCGTACCAACCAAAGGTCGGTTAATGCTGCTTCAAATGGGGTAAAGTCTCAAAATTGTAATGGTCATGAAGCTTCCAAAAAACCAAAGCCTGCTCTTCCACCAAAAGGACCGCAACAAAAAAATTCTGAACAGTCTTCTTGGAAGGATATTTCTACTAAATCTCAGGTTGATAAAGTGCCTTCAGGCCCACGGATGAAGTTTAACATCAATGGAAACTTGAGCACCAAAAGAACTCCTGCAACTGATAATGGAAACATTGCTTACAAGAACCAATCTGTGGGATCAAATGGGGAGGTGAAGGACTCGGTTAGTTTGGACAAAAGTGAGAAAGCCAAGATGACTTTGATAAATGGGGATGGTTTGAACGGGAATATAACATCTGATACTGTTGAAGCTAACAACACCCAATCATTTTCTTCACCAATAGAAAATGGTAGTGTGGGTTCAGTGAAATCCGAACCCTCTGAAGTTACTGCTTCAGTGAAAACCAAACTCCCTGATCACTCTGAATTGGATAGCAGTGGTCCCAATGGTCACTCCATGGTCCTTGGGCCCAAAAGGAAATCTCGGGGTTCATGCATTTTGTTTGAACATGATGCTCAATCTCTGGAAAAAGTTGAAGAATTGAAGGCAGGTCTCAAGAAAGAAGCTCTCTCAGTTTTGCGCTCATGCGGTTGGGCAGATGAGGTTTTCAGTTTTATGCGTTCCCGGAAGAGGTTATGTGTAGATCAAGTTGAACTTACTCAGAATGGTGATGAAGCAAAGAAACTGTTGATCAGGGATTCCAAATCAACTTTTATTTCAAAGATACCTGAGTCTTTGAAGGGGGGCTTCATCAAACGTATTAAATCATTTAGCCAAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0022626 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

639

Amino Acids

70.71

Weight (kDa)

9.16

Isoelectric Point (pI)

53.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	27 - 350	4.3e-55	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	27 - 331	1.2e-18	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14400
fragaria_vesca	FvH4_3g16490 FvH4_3g16490 FvH4_3g16490 FvH4_3g16490
malus_domestica	MD05G1209600.v1.1 MD10G1195900.v1.1
prunus_persica	Prupe.4G147900_v2.0.a1
pyrus_communis	pycom05g19560 pycom10g16950
rosa_chinensis	RchiOBHm_Chr5g0027541
rosa_laevigata	RLG00000033025
rosa_multiflora	Rmu_co8326735.1_g000001 Rmu_co8467017.1_g000001 Rmu_sc0004493.1_g000008 Rmu_sc0007802.1_g000039 Rmu_sc0011056.1_g000009
rosa_roxburghii	Rroxscaffold_1G00052000 Rroxscaffold_1G00052020
rosa_rugosa	Rorug05G0099400 Rorug05G0099500 Rorug05G0099600
rosa_samantha	Rh5AG193700 Rh5BG191700 Rh5CG211900 Rh5DG193400 Rh5DG193600
rosa_wichuraiana	Rw5G017660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1676
AccB7I	CCANNNNNTGG	1 cut(s)	1330
AccBSI	CCGCTC	1 cut(s)	255
AccI	GTMKAC	1 cut(s)	43
AccII	CGCG	1 cut(s)	216
AciI	CCGC	6 cut(s)	58, 71, 253, 716, 1163, 1725
AclWI	GGATC	4 cut(s)	276, 863, 876, 1342
AcoI	YGGCCR	3 cut(s)	150, 439, 673
AcsI	RAATTY	2 cut(s)	359, 1174
AcuI	CTGAAG	5 cut(s)	107, 428, 1218, 1515, 1539
AcvI	CACGTG	1 cut(s)	396
AcyI	GRCGYC	1 cut(s)	636
AfaI	GTAC	4 cut(s)	686, 898, 906, 1057
AfiI	CCNNNNNNNGG	9 cut(s)	77, 148, 645, 929, 1065, 1069, 1157, 1330, 1767
AflII	CTTAAG	1 cut(s)	770
AflIII	ACRYGT	1 cut(s)	393
AjiI	CACGTC	1 cut(s)	875
AjnI	CCWGG	1 cut(s)	540
AleI	CACNNNNGTG	1 cut(s)	506
AluBI	AGCT	9 cut(s)	303, 415, 530, 664, 846, 889, 1124, 1448, 1703
AluI	AGCT	9 cut(s)	303, 415, 530, 664, 846, 889, 1124, 1448, 1703
Alw21I	GWGCWC	1 cut(s)	1277
Alw26I	GTCTC	3 cut(s)	1000, 1104, 1694
AlwI	GGATC	4 cut(s)	276, 863, 876, 1342
Ama87I	CYCGRG	1 cut(s)	1620
AoxI	GGCC	8 cut(s)	4, 67, 150, 439, 462, 673, 1237, 1604
ApaI	GGGCCC	1 cut(s)	1608
ApeKI	GCWGC	3 cut(s)	34, 978, 1079
ApoI	RAATTY	2 cut(s)	359, 1174
Asp700I	GAANNNNTTC	2 cut(s)	314, 327
AspLEI	GCGC	4 cut(s)	216, 286, 423, 1719
AspS9I	GGNCC	8 cut(s)	4, 68, 1160, 1238, 1577, 1597, 1604, 1605
AsuC2I	CCSGG	2 cut(s)	492, 1762
AsuHPI	GGTGA	8 cut(s)	124, 421, 520, 556, 912, 1360, 1464, 1817
AvaI	CYCGRG	1 cut(s)	1620
AvaII	GGWCC	3 cut(s)	1160, 1577, 1597
BaeGI	GKGCMC	1 cut(s)	1608
BaeI	ACNNNNGTAYC	4 cut(s)	888, 921, 1853, 1886
BalI	TGGCCA	3 cut(s)	152, 441, 675
BamHI	GGATCC	1 cut(s)	868
BanII	GRGCYC	1 cut(s)	1608
BbrPI	CACGTG	1 cut(s)	396
BbsI	GAAGAC	3 cut(s)	68, 354, 1179
Bbv12I	GWGCWC	1 cut(s)	1277
BbvI	GCAGC	3 cut(s)	46, 965, 1066
BccI	CCATC	4 cut(s)	505, 665, 955, 1403
BceAI	ACGGC	3 cut(s)	466, 484, 501
BciT130I	CCWGG	1 cut(s)	542
BclI	TGATCA	2 cut(s)	1552, 1827
BcnI	CCSGG	2 cut(s)	492, 1762
BcoDI	GTCTC	3 cut(s)	1000, 1104, 1694
BfaI	CTAG	3 cut(s)	77, 278, 720
BfrI	CTTAAG	1 cut(s)	770
BfuAI	ACCTGC	1 cut(s)	1676
BisI	GCNGC	4 cut(s)	35, 717, 979, 1080
BlsI	GCNGC	4 cut(s)	36, 718, 980, 1081
Bme1390I	CCNGG	3 cut(s)	492, 542, 1762
Bme18I	GGWCC	3 cut(s)	1160, 1577, 1597
BmeT110I	CYCGRG	1 cut(s)	1620
BmgBI	CACGTC	1 cut(s)	875
BmgT120I	GGNCC	8 cut(s)	4, 68, 1160, 1238, 1577, 1597, 1604, 1605
BmiI	GGNNCC	4 cut(s)	489, 870, 1579, 1606
BmrFI	CCNGG	3 cut(s)	492, 542, 1762
BmsI	GCATC	4 cut(s)	271, 370, 946, 1639
BpiI	GAAGAC	3 cut(s)	68, 354, 1179
BpmI	CTGGAG	1 cut(s)	257
BpuEI	CTTGAG	3 cut(s)	280, 1291, 1676
BpuMI	CCSGG	2 cut(s)	492, 1762
BsaAI	YACGTR	1 cut(s)	396
BsaHI	GRCGYC	1 cut(s)	636
BsaI	GGTCTC	1 cut(s)	1694
BsaJI	CCNNGG	6 cut(s)	91, 334, 491, 1241, 1593, 1600
BsaXI	ACNNNNNCTCC	2 cut(s)	161, 191
Bsc4I	CCNNNNNNNGG	9 cut(s)	77, 148, 645, 929, 1065, 1069, 1157, 1330, 1767
Bse118I	RCCGGY	1 cut(s)	286
Bse1I	ACTGG	1 cut(s)	655
Bse3DI	GCAATG	4 cut(s)	442, 460, 813, 1308
BseBI	CCWGG	1 cut(s)	542
BseDI	CCNNGG	6 cut(s)	91, 334, 491, 1241, 1593, 1600
BseGI	GGATG	5 cut(s)	676, 961, 1038, 1251, 1414
BseLI	CCNNNNNNNGG	9 cut(s)	77, 148, 645, 929, 1065, 1069, 1157, 1330, 1767
BseMI	GCAATG	4 cut(s)	442, 460, 813, 1308
BseMII	CTCAG	7 cut(s)	286, 651, 915, 1229, 1722, 1811, 1857
BseNI	ACTGG	1 cut(s)	655
BseRI	GAGGAG	2 cut(s)	135, 169
BseSI	GKGCMC	1 cut(s)	1608
BseXI	GCAGC	3 cut(s)	46, 965, 1066
Bsh1236I	CGCG	1 cut(s)	216
Bsh1285I	CGRYCG	1 cut(s)	340
BshFI	GGCC	8 cut(s)	6, 69, 152, 441, 464, 675, 1239, 1606
BsiEI	CGRYCG	1 cut(s)	340
BsiHKAI	GWGCWC	1 cut(s)	1277
BsiHKCI	CYCGRG	1 cut(s)	1620
BsiSI	CCGG	4 cut(s)	287, 418, 491, 1762
BslFI	GGGAC	2 cut(s)	496, 1563
BslI	CCNNNNNNNGG	9 cut(s)	77, 148, 645, 929, 1065, 1069, 1157, 1330, 1767
BsmAI	GTCTC	3 cut(s)	1000, 1104, 1694
BsmFI	GGGAC	2 cut(s)	496, 1563
BsnI	GGCC	8 cut(s)	6, 69, 152, 441, 464, 675, 1239, 1606
Bso31I	GGTCTC	1 cut(s)	1694
BsoBI	CYCGRG	1 cut(s)	1620
Bsp120I	GGGCCC	1 cut(s)	1604
Bsp1286I	GDGCHC	2 cut(s)	1277, 1608
Bsp1407I	TGTACA	1 cut(s)	904
Bsp143I	GATC	7 cut(s)	268, 868, 985, 1334, 1552, 1780, 1827
Bsp19I	CCATGG	1 cut(s)	1593
BspACI	CCGC	6 cut(s)	58, 71, 253, 716, 1163, 1725
BspANI	GGCC	8 cut(s)	6, 69, 152, 441, 464, 675, 1239, 1606
BspCNI	CTCAG	7 cut(s)	285, 652, 916, 1228, 1721, 1810, 1858
BspFNI	CGCG	1 cut(s)	216
BspHI	TCATGA	2 cut(s)	355, 1117
BspLI	GGNNCC	4 cut(s)	489, 870, 1579, 1606
BspMI	ACCTGC	1 cut(s)	1676
BspPI	GGATC	4 cut(s)	276, 863, 876, 1342
BspQI	GCTCTTC	1 cut(s)	1152
BspTI	CTTAAG	1 cut(s)	770
BspTNI	GGTCTC	1 cut(s)	1694
BsrBI	CCGCTC	1 cut(s)	255
BsrDI	GCAATG	4 cut(s)	442, 460, 813, 1308
BsrFI	RCCGGY	1 cut(s)	286
BsrGI	TGTACA	1 cut(s)	904
BsrI	ACTGG	1 cut(s)	655
BssAI	RCCGGY	1 cut(s)	286
BssECI	CCNNGG	6 cut(s)	91, 334, 491, 1241, 1593, 1600
BssMI	GATC	7 cut(s)	268, 868, 985, 1334, 1552, 1780, 1827
BssNI	GRCGYC	1 cut(s)	636
BssT1I	CCWWGG	2 cut(s)	1593, 1600
Bst2UI	CCWGG	1 cut(s)	542
Bst4CI	ACNGT	5 cut(s)	338, 505, 1185, 1441, 1824
Bst6I	CTCTTC	4 cut(s)	199, 819, 1152, 1760
BstACI	GRCGYC	1 cut(s)	636
BstAFI	CTTAAG	1 cut(s)	770
BstAPI	GCANNNNNTGC	1 cut(s)	102
BstAUI	TGTACA	1 cut(s)	904
BstBAI	YACGTR	1 cut(s)	396
BstC8I	GCNNGC	6 cut(s)	8, 71, 233, 288, 385, 1143
BstDEI	CTNAG	7 cut(s)	272, 660, 924, 1215, 1708, 1797, 1866
BstDSI	CCRYGG	3 cut(s)	334, 1241, 1593
BstENI	CCTNNNNNAGG	1 cut(s)	643
BstF5I	GGATG	5 cut(s)	676, 961, 1038, 1251, 1414
BstFNI	CGCG	1 cut(s)	216
BstHHI	GCGC	4 cut(s)	216, 286, 423, 1719
BstKTI	GATC	7 cut(s)	271, 871, 988, 1337, 1555, 1783, 1830
BstMAI	GTCTC	3 cut(s)	1000, 1104, 1694
BstMBI	GATC	7 cut(s)	268, 868, 985, 1334, 1552, 1780, 1827
BstMCI	CGRYCG	1 cut(s)	340
BstMWI	GCNNNNNNNGC	3 cut(s)	102, 241, 852
BstNI	CCWGG	1 cut(s)	542
BstNSI	RCATGY	1 cut(s)	235
BstSCI	CCNGG	3 cut(s)	490, 540, 1760
BstSLI	GKGCMC	1 cut(s)	1608
BstUI	CGCG	1 cut(s)	216
BstV1I	GCAGC	3 cut(s)	46, 965, 1066
BstV2I	GAAGAC	3 cut(s)	68, 354, 1179
BstX2I	RGATCY	2 cut(s)	268, 868
BstYI	RGATCY	2 cut(s)	268, 868
BsuRI	GGCC	8 cut(s)	6, 69, 152, 441, 464, 675, 1239, 1606
BtgI	CCRYGG	3 cut(s)	334, 1241, 1593
BtgZI	GCGATG	1 cut(s)	974
BtrI	CACGTC	1 cut(s)	875
BtsCI	GGATG	5 cut(s)	676, 961, 1038, 1251, 1414
BtsI	GCAGTG	1 cut(s)	1579
BtsIMutI	CAGTG	5 cut(s)	131, 501, 1506, 1539, 1579
BveI	ACCTGC	1 cut(s)	1676
Cac8I	GCNNGC	6 cut(s)	8, 71, 233, 288, 385, 1143
CciI	TCATGA	2 cut(s)	355, 1117
CfoI	GCGC	4 cut(s)	216, 286, 423, 1719
Cfr10I	RCCGGY	1 cut(s)	286
Cfr13I	GGNCC	8 cut(s)	4, 68, 1160, 1238, 1577, 1597, 1604, 1605
CseI	GACGC	3 cut(s)	106, 359, 644
Csp6I	GTAC	4 cut(s)	685, 897, 905, 1056
CviAII	CATG	9 cut(s)	232, 356, 443, 850, 1118, 1594, 1629, 1646, 1722
CviQI	GTAC	4 cut(s)	685, 897, 905, 1056
DdeI	CTNAG	7 cut(s)	272, 660, 924, 1215, 1708, 1797, 1866
DpnI	GATC	7 cut(s)	270, 870, 987, 1336, 1554, 1782, 1829
DpnII	GATC	7 cut(s)	268, 868, 985, 1334, 1552, 1780, 1827
EaeI	YGGCCR	3 cut(s)	150, 439, 673
Eam1104I	CTCTTC	4 cut(s)	199, 819, 1152, 1760
EarI	CTCTTC	4 cut(s)	199, 819, 1152, 1760
Eco130I	CCWWGG	2 cut(s)	1593, 1600
Eco24I	GRGCYC	1 cut(s)	1608
Eco31I	GGTCTC	1 cut(s)	1694
Eco47I	GGWCC	3 cut(s)	1160, 1577, 1597
Eco57I	CTGAAG	5 cut(s)	107, 428, 1218, 1515, 1539
Eco72I	CACGTG	1 cut(s)	396
Eco88I	CYCGRG	1 cut(s)	1620
EcoNI	CCTNNNNNAGG	1 cut(s)	643
EcoRI	GAATTC	1 cut(s)	359
EcoRII	CCWGG	1 cut(s)	540
EcoT14I	CCWWGG	2 cut(s)	1593, 1600
EcoT22I	ATGCAT	2 cut(s)	946, 1634
EcoT38I	GRGCYC	1 cut(s)	1608
ErhI	CCWWGG	2 cut(s)	1593, 1600
FaeI	CATG	9 cut(s)	235, 359, 446, 853, 1121, 1597, 1632, 1649, 1725
FalI	AAGNNNNNCTT	4 cut(s)	1776, 1808, 1868, 1900
FaqI	GGGAC	2 cut(s)	496, 1563
FatI	CATG	9 cut(s)	231, 355, 442, 849, 1117, 1593, 1628, 1645, 1721
FauI	CCCGC	1 cut(s)	78
FbaI	TGATCA	2 cut(s)	1552, 1827
FblI	GTMKAC	1 cut(s)	43
Fnu4HI	GCNGC	4 cut(s)	35, 717, 979, 1080
FokI	GGATG	5 cut(s)	683, 968, 1025, 1258, 1421
FriOI	GRGCYC	1 cut(s)	1608
Fsp4HI	GCNGC	4 cut(s)	35, 717, 979, 1080
FspBI	CTAG	3 cut(s)	77, 278, 720
GlaI	GCGC	4 cut(s)	215, 285, 422, 1718
GluI	GCNGC	4 cut(s)	35, 717, 979, 1080
GsuI	CTGGAG	1 cut(s)	257
HaeIII	GGCC	8 cut(s)	6, 69, 152, 441, 464, 675, 1239, 1606
HapII	CCGG	4 cut(s)	287, 418, 491, 1762
HgaI	GACGC	3 cut(s)	106, 359, 644
HhaI	GCGC	4 cut(s)	216, 286, 423, 1719
Hin1I	GRCGYC	1 cut(s)	636
Hin1II	CATG	9 cut(s)	235, 359, 446, 853, 1121, 1597, 1632, 1649, 1725
Hin6I	GCGC	4 cut(s)	214, 284, 421, 1717
HinP1I	GCGC	4 cut(s)	214, 284, 421, 1717
HindIII	AAGCTT	2 cut(s)	887, 1122
HinfI	GANTC	9 cut(s)	40, 49, 191, 295, 569, 926, 1355, 1835, 1868
HpaII	CCGG	4 cut(s)	287, 418, 491, 1762
HphI	GGTGA	8 cut(s)	124, 421, 520, 556, 912, 1360, 1464, 1817
Hpy166II	GTNNAC	3 cut(s)	44, 501, 1036
Hpy188III	TCNNGA	9 cut(s)	278, 344, 356, 605, 866, 878, 1118, 1661, 1693
Hpy8I	GTNNAC	3 cut(s)	44, 501, 1036
HpyAV	CCTTC	7 cut(s)	131, 410, 1189, 1242, 1345, 1675, 1870
HpyCH4III	ACNGT	5 cut(s)	338, 505, 1185, 1441, 1824
HpyCH4IV	ACGT	4 cut(s)	372, 395, 874, 1894
HpyF10VI	GCNNNNNNNGC	3 cut(s)	102, 241, 852
HpyF3I	CTNAG	7 cut(s)	272, 660, 924, 1215, 1708, 1797, 1866
HpySE526I	ACGT	4 cut(s)	372, 395, 874, 1894
Hsp92I	GRCGYC	1 cut(s)	636
Hsp92II	CATG	9 cut(s)	235, 359, 446, 853, 1121, 1597, 1632, 1649, 1725
HspAI	GCGC	4 cut(s)	214, 284, 421, 1717
KroI	GCCGGC	1 cut(s)	286
KroNI	GCCGGC	1 cut(s)	288
Ksp22I	TGATCA	2 cut(s)	1552, 1827
Kzo9I	GATC	7 cut(s)	268, 868, 985, 1334, 1552, 1780, 1827
LguI	GCTCTTC	1 cut(s)	1152
LmnI	GCTCC	5 cut(s)	260, 300, 420, 493, 527
Lsp1109I	GCAGC	3 cut(s)	46, 965, 1066
LweI	GCATC	4 cut(s)	271, 370, 946, 1639
MaeI	CTAG	3 cut(s)	77, 278, 720
MaeII	ACGT	4 cut(s)	372, 395, 874, 1894
MaeIII	GTNAC	5 cut(s)	188, 368, 701, 1522, 1586
MalI	GATC	7 cut(s)	270, 870, 987, 1336, 1554, 1782, 1829
MbiI	CCGCTC	1 cut(s)	255
MboI	GATC	7 cut(s)	268, 868, 985, 1334, 1552, 1780, 1827
MfeI	CAATTG	1 cut(s)	17
MflI	RGATCY	2 cut(s)	268, 868
MhlI	GDGCHC	2 cut(s)	1277, 1608
MlsI	TGGCCA	3 cut(s)	152, 441, 675
MluNI	TGGCCA	3 cut(s)	152, 441, 675
MlyI	GAGTC	6 cut(s)	49, 185, 578, 935, 1349, 1877
MmeI	TCCRAC	2 cut(s)	222, 790
Mox20I	TGGCCA	3 cut(s)	152, 441, 675
Mph1103I	ATGCAT	2 cut(s)	946, 1634
MreI	CGCCGGCG	1 cut(s)	286
MroNI	GCCGGC	1 cut(s)	286
MroXI	GAANNNNTTC	2 cut(s)	314, 327
MscI	TGGCCA	3 cut(s)	152, 441, 675
MseI	TTAA	6 cut(s)	630, 771, 951, 1074, 1254, 1899
MslI	CAYNNNNRTG	2 cut(s)	506, 939
Msp20I	TGGCCA	3 cut(s)	152, 441, 675
MspCI	CTTAAG	1 cut(s)	770
MspI	CCGG	4 cut(s)	287, 418, 491, 1762
MspR9I	CCNGG	3 cut(s)	492, 542, 1762
MunI	CAATTG	1 cut(s)	17
MvaI	CCWGG	1 cut(s)	542
MvnI	CGCG	1 cut(s)	216
MwoI	GCNNNNNNNGC	3 cut(s)	102, 241, 852
NaeI	GCCGGC	1 cut(s)	288
NciI	CCSGG	2 cut(s)	492, 1762
NcoI	CCATGG	1 cut(s)	1593
NdeII	GATC	7 cut(s)	268, 868, 985, 1334, 1552, 1780, 1827
NgoMIV	GCCGGC	1 cut(s)	286
NlaIII	CATG	9 cut(s)	235, 359, 446, 853, 1121, 1597, 1632, 1649, 1725
NlaIV	GGNNCC	4 cut(s)	489, 870, 1579, 1606
NmeAIII	GCCGAG	2 cut(s)	63, 72
NmuCI	GTSAC	2 cut(s)	188, 1586
NsiI	ATGCAT	2 cut(s)	946, 1634
NspI	RCATGY	1 cut(s)	235
OliI	CACNNNNGTG	1 cut(s)	506
PaeI	GCATGC	1 cut(s)	235
PagI	TCATGA	2 cut(s)	355, 1117
PciSI	GCTCTTC	1 cut(s)	1152
PcsI	WCGNNNNNNNCGW	1 cut(s)	337
PdiI	GCCGGC	1 cut(s)	288
PdmI	GAANNNNTTC	2 cut(s)	314, 327
PfeI	GAWTC	3 cut(s)	49, 295, 1835
PflMI	CCANNNNNTGG	1 cut(s)	1330
PfoI	TCCNGGA	1 cut(s)	1760
PkrI	GCNGC	4 cut(s)	36, 718, 980, 1081
PleI	GAGTC	6 cut(s)	48, 185, 577, 934, 1349, 1876
PmaCI	CACGTG	1 cut(s)	396
PmlI	CACGTG	1 cut(s)	396
PpsI	GAGTC	6 cut(s)	48, 185, 577, 934, 1349, 1876
Ppu21I	YACGTR	1 cut(s)	396
Psp6I	CCWGG	1 cut(s)	540
PspCI	CACGTG	1 cut(s)	396
PspGI	CCWGG	1 cut(s)	540
PspN4I	GGNNCC	4 cut(s)	489, 870, 1579, 1606
PspOMI	GGGCCC	1 cut(s)	1604
PspPI	GGNCC	8 cut(s)	4, 68, 1160, 1238, 1577, 1597, 1604, 1605
PsrI	GAACNNNNNNTAC	2 cut(s)	1480, 1512
PsuI	RGATCY	2 cut(s)	268, 868
RsaI	GTAC	4 cut(s)	686, 898, 906, 1057
RsaNI	GTAC	4 cut(s)	685, 897, 905, 1056
RseI	CAYNNNNRTG	2 cut(s)	506, 939
SapI	GCTCTTC	1 cut(s)	1152
SaqAI	TTAA	6 cut(s)	630, 771, 951, 1074, 1254, 1899
SatI	GCNGC	4 cut(s)	35, 717, 979, 1080
Sau3AI	GATC	7 cut(s)	268, 868, 985, 1334, 1552, 1780, 1827
Sau96I	GGNCC	8 cut(s)	4, 68, 1160, 1238, 1577, 1597, 1604, 1605
SchI	GAGTC	6 cut(s)	49, 185, 578, 935, 1349, 1877
ScrFI	CCNGG	3 cut(s)	492, 542, 1762
SduI	GDGCHC	2 cut(s)	1277, 1608
SfaNI	GCATC	4 cut(s)	271, 370, 946, 1639
SgrAI	CRCCGGYG	1 cut(s)	286
SinI	GGWCC	3 cut(s)	1160, 1577, 1597
SmiMI	CAYNNNNRTG	2 cut(s)	506, 939
SmlI	CTYRAG	4 cut(s)	259, 770, 1270, 1691
SmoI	CTYRAG	4 cut(s)	259, 770, 1270, 1691
SphI	GCATGC	1 cut(s)	235
SsiI	CCGC	6 cut(s)	58, 71, 253, 716, 1163, 1725
SspI	AATATT	1 cut(s)	313
SspMI	CTAG	3 cut(s)	77, 278, 720
StyD4I	CCNGG	3 cut(s)	490, 540, 1760
StyI	CCWWGG	2 cut(s)	1593, 1600
TaaI	ACNGT	5 cut(s)	338, 505, 1185, 1441, 1824
TaiI	ACGT	4 cut(s)	375, 398, 877, 1897
TaqI	TCGA	2 cut(s)	734, 842
TatI	WGTACW	2 cut(s)	684, 904
TauI	GCSGC	1 cut(s)	719
TfiI	GAWTC	3 cut(s)	49, 295, 1835
Tru1I	TTAA	6 cut(s)	630, 771, 951, 1074, 1254, 1899
Tru9I	TTAA	6 cut(s)	630, 771, 951, 1074, 1254, 1899
TscAI	CASTG	5 cut(s)	131, 508, 1506, 1539, 1579
TseFI	GTSAC	2 cut(s)	188, 1586
TseI	GCWGC	3 cut(s)	34, 978, 1079
Tsp45I	GTSAC	2 cut(s)	188, 1586
TspDTI	ATGAA	8 cut(s)	372, 838, 993, 1134, 1262, 1617, 1824, 1876
TspGWI	ACGGA	3 cut(s)	213, 223, 1258
TspRI	CASTG	5 cut(s)	131, 508, 1506, 1539, 1579
Van91I	CCANNNNNTGG	1 cut(s)	1330
Vha464I	CTTAAG	1 cut(s)	770
VpaK11BI	GGWCC	3 cut(s)	1160, 1577, 1597
XagI	CCTNNNNNAGG	1 cut(s)	643
XapI	RAATTY	2 cut(s)	359, 1174
XbaI	TCTAGA	1 cut(s)	277
XceI	RCATGY	1 cut(s)	235
XcmI	CCANNNNNNNNNTGG	1 cut(s)	508
XmiI	GTMKAC	1 cut(s)	43
XmnI	GAANNNNTTC	2 cut(s)	314, 327
XspI	CTAG	3 cut(s)	77, 278, 720
Zsp2I	ATGCAT	2 cut(s)	946, 1634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.