Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004570

Physical Location & Seq

Genomic Coordinates Forward (+)

6028688 .. 6031986

Gene Structure 3299 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G17630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGGCAAGCACCAACGTTACAGGGCAATGCCCGGGTCCAATGAAGGCTACCTCCAATGGAGCCTTCCAAAACGAAAGCCCTCTTGATTTCGCGCTTCCTCTTATCATCCTACAAATCGTCTTGGTGGTTGTGTTTACAAGGCTCTTAGCTTACTTTCTTAAGCCTCTCAAACAGCCCCGAGTCATTGCTGAGATCATTGGAGGGATACTGCTTGGACCTTCTGCACTAGGGAGAAGCAAGGCCTATCTTGACACCATCTTCCCAAAGAAGAGCTTGACCGTTTTAGACACACTCGCCAACATTGGTCTTCTGTTTTTCTTGTTCCTAGTTGGGCTTGAGCTTGACTTTGCAGCAATAAAAAAAACTGGAAAGAAATCACTATTGATAGCCATAGCTGGGATCTCACTTCCTTTTATAGTGGGTGTAGGCACATCTTTTGTTCTCAGTGCCACCATAAGCAAAGGAGTCGATCAGCTTCCTTTTATTGTCTTCATGGGTGTTGCCTTATCAATCACTGCCTTCCCTGTGCTTGCTCGTATACTAGCTGAGCTAAAGCTTCTAACAACTGACATTGGACGTATGGCAATGTCTGCAGCGGGAGTAAACGATGTTGCAGCTTGGATACTCCTTGCGCTTGCTATTGCTCTCTCAGGAGATGGGACTTCTCCTCTTGTATCTGTTTGGGTTCTTCTCTGTGGAACTGGATTCGTGATCTTTGCAGTTGTGGCAATCAAACCTCTGCTTGCTTATATGGCTAGACGCTGTCCTGAGGGAGAGCCTGTAAAGGAACTCTATGTTTGTGTCACTCTAACCGTGGTTTTAGCAGCAAGCTTTGTGACAGACACTATTGGGATACACGCGCTGTTCGGGGCGTTTGTGGTAGGTATAGTAGCTCCTAAAGAAGGACCATTTTGCAGGATTTTGACTGAGAAGATAGAGGATCTTGTTTCGGGGCTTCTTCTACCTCTGTATTTTGCGGCTAGCGGTCTCAAAACTGATGTAACAACGATCAGGGGAGCACAGTCATGGGGACTTCTAGTTCTTGTCATTCTCACCACTTGTTTCGGGAAGATTGTAGGAACAGTTGGTTCCTCGATGCTCTGCAAGGTTCCTTTCAGAGAAGCCGTGACACTTGGATTCCTTATGAATACCAAAGGTTTAGTAGAGCTCATTGTTCTTAACATTGGCAAGGACCGGAAGGTGCTGAATGATCAAGCATTTGCGATCTTAGTCCTAATGGCATTGTTCACAACCTTCATCACAACTCCAATTGTGATGCTTATTTACAAGCCTGCAAGAAAAGGAGCACCGTACAAGCACAGAACCATCCAAAGAAAAGATCATGATTCTGAGCTAAGGATACTTGCTTGCTTCCACAGTACCCGTAACATCCCCACATTGATCAATCTGATCGAATCATCAAGAGGAACAGGCAAAAAGGGACGCCTCTGCGTTTACGCGATGCATCTGATGGAGCTTTCTGAACGGTCATCAGCGATCGCGATGGTTCACAAAGCTCGAAACAATGGTCTCCCAATCTGGAATAAGATCGAGAGATCAACGGACCAGATGGTGATTGCCTTCGAGGCTTACCAGCATCTACGAGCAGTAGCGGTTAGACCCATGACTGCAATCTCTGGCCTCAGCAGCATCCACGAGGACATATGCACAAGCGCGCATCAGAAACGAGTAGCGATGATACTGCTTCCGTTTCACAAGCATCAGAGAATGGACGGAGCGATGGAGTCAATAGGACATAGGTTCCATGAAGTGAACCAACGGGTCTTGCAACGAGCTCCTTGCTCAGTCGGGATTCTTGTGGACAGAGGACTCGGAGGAACCTCACAGGTTGTAGCCAGCGAAGTGGCTTACAAAGTCGTGATTCCATTCTTTGGAGGCCTCGACGACCGAGAAGCTCTCGCATACGGGATGAAAATGGTGGAACATCCAGGAATCACACTAACTGTTTACAAATTTGTAGCTGCGAGAGGAACATTGAAGAGATTCGAGAAGAGTGAACACGACGAAAAGGAGAAAAAAGAGAAAGAGACTGACGAAGAGTTTGTGAGGGAGTTGATGAATGATCCAAGAGGAAATGAGTCATTGGCTTACGAGGAAAGAGTCGTTGAGAGCAAAGACGATATCATCGCGACACTTAAATCGATGAGTAAATGCAATCTCTTCGTCGTTGGAAGAAATGCAGCTGTTGCATCGTTGGTTAAGAGTACAGACTGTCCAGAGTTAGGACCAGTTGGACGCTTGTTGTCGTCATCAGAGTTTTCCACCACCGCGTCGGTGCTCGTCGTTCAGGGATATGATCCAGCAGCAGATACACGACCGCTCGTTGAGGAAGATGCAGAGTACGATCAGTCTTCCAGAGATATTTCAGACTTAACTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005783 GO:0006605 GO:0006623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015672 GO:0015833 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

800

Amino Acids

86.91

Weight (kDa)

8.76

Isoelectric Point (pI)

33.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	46 - 424	8.8e-63	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	482 - 619	2e-51	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	626 - 772	2.1e-26	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17630 AT3G17630
fragaria_vesca	FvH4_4g21880
malus_domestica	MD13G1136000.v1.1 MD16G1131400.v1.1
prunus_persica	Prupe.1G209400_v2.0.a1
pyrus_communis	pycom16g11580
rosa_chinensis	RchiOBHm_Chr3g0483861
rosa_laevigata	RLG00000007178 RLG00000023257
rosa_multiflora	Rmu_co8183874.1_g000001 Rmu_co8462775.1_g000001 Rmu_sc0004940.1_g000012 Rmu_sc0005901.1_g000001 Rmu_sc0009599.1_g000012
rosa_roxburghii	Rroxscaffold_5G00369850 Rroxscaffold_6G00398090
rosa_rugosa	Rorug03G0208200.1 Rorug03G0208300 Rorug04G0222700 Rorug04G0222800
rosa_samantha	Rh3AG257000 Rh3BG293400 Rh3CG291700 Rh3DG286700 Rh4AG279900 Rh4AG280100 Rh4BG285300 Rh4BG285500 Rh4CG300900
rosa_wichuraiana	Rw3G023230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1892
AccBSI	CCGCTC	1 cut(s)	2341
AccI	GTMKAC	1 cut(s)	538
AccII	CGCG	7 cut(s)	92, 860, 1460, 1502, 1676, 2150, 2291
AciI	CCGC	6 cut(s)	596, 977, 984, 1613, 2289, 2339
AclI	AACGTT	1 cut(s)	15
AclWI	GGATC	4 cut(s)	407, 948, 2078, 2312
AcsI	RAATTY	1 cut(s)	1973
AcyI	GRCGYC	1 cut(s)	1444
AfaI	GTAC	4 cut(s)	1313, 1381, 2227, 2363
AfiI	CCNNNNNNNGG	4 cut(s)	396, 902, 1892, 2243
AflII	CTTAAG	1 cut(s)	158
AgsI	TTSAA	1 cut(s)	1999
AjnI	CCWGG	1 cut(s)	1948
AjuI	GAANNNNNNNTTGG	2 cut(s)	47, 79
AloI	GAACNNNNNNTCC	2 cut(s)	1023, 1055
Alw21I	GWGCWC	5 cut(s)	1021, 1170, 1309, 1798, 2301
Alw26I	GTCTC	3 cut(s)	992, 1535, 2042
AlwI	GGATC	4 cut(s)	407, 948, 2078, 2312
Ama87I	CYCGRG	2 cut(s)	31, 177
AoxI	GGCC	3 cut(s)	240, 1639, 1897
ApeKI	GCWGC	8 cut(s)	350, 593, 614, 824, 1647, 1982, 2201, 2324
ApoI	RAATTY	1 cut(s)	1973
ArsI	GACNNNNNNTTYG	4 cut(s)	1513, 1545, 2045, 2077
AsiSI	GCGATCGC	1 cut(s)	1500
Asp700I	GAANNNNTTC	1 cut(s)	2003
AspLEI	GCGC	5 cut(s)	94, 634, 862, 1676, 1678
AspS9I	GGNCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
AsuC2I	CCSGG	2 cut(s)	32, 33
AsuHPI	GGTGA	2 cut(s)	1045, 1585
AsuNHI	GCTAGC	1 cut(s)	980
AvaI	CYCGRG	2 cut(s)	31, 177
AvaII	GGWCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
AxyI	CCTNAGG	1 cut(s)	768
BanII	GRGCYC	2 cut(s)	1170, 1798
BauI	CACGAG	1 cut(s)	1655
BbsI	GAAGAC	3 cut(s)	299, 481, 2364
Bbv12I	GWGCWC	5 cut(s)	1021, 1170, 1309, 1798, 2301
BbvCI	CCTCAGC	1 cut(s)	1643
BbvI	GCAGC	8 cut(s)	362, 605, 626, 836, 1659, 1969, 2213, 2336
BccI	CCATC	7 cut(s)	263, 650, 1334, 1465, 1498, 1564, 1735
BceAI	ACGGC	1 cut(s)	1109
BcgI	CGANNNNNNTGC	8 cut(s)	448, 482, 1684, 1718, 1782, 1816, 2164, 2198
BciT130I	CCWGG	1 cut(s)	1950
BciVI	GTATCC	4 cut(s)	198, 615, 846, 1353
BclI	TGATCA	2 cut(s)	1210, 1401
BcnI	CCSGG	2 cut(s)	32, 33
BcoDI	GTCTC	3 cut(s)	992, 1535, 2042
BfaI	CTAG	6 cut(s)	227, 326, 542, 756, 981, 1037
BfmI	CTRYAG	1 cut(s)	591
BfrI	CTTAAG	1 cut(s)	158
BfuI	GTATCC	4 cut(s)	198, 615, 846, 1353
BglI	GCCNNNNNGGC	1 cut(s)	1586
BisI	GCNGC	9 cut(s)	351, 594, 615, 825, 978, 1648, 1983, 2202, 2325
BlpI	GCTNAGC	1 cut(s)	546
BlsI	GCNGC	9 cut(s)	352, 595, 616, 826, 979, 1649, 1984, 2203, 2326
Bme1390I	CCNGG	3 cut(s)	32, 33, 1950
Bme18I	GGWCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
BmeT110I	CYCGRG	2 cut(s)	31, 177
BmgT120I	GGNCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
BmiI	GGNNCC	6 cut(s)	36, 61, 1090, 1110, 1763, 1840
BmrFI	CCNGG	3 cut(s)	32, 33, 1950
BmtI	GCTAGC	1 cut(s)	984
BpiI	GAAGAC	3 cut(s)	299, 481, 2364
BplI	GAGNNNNNCTC	2 cut(s)	1902, 1934
Bpu10I	CCTNAGC	2 cut(s)	1355, 1643
Bpu1102I	GCTNAGC	1 cut(s)	546
BpuEI	CTTGAG	1 cut(s)	356
BpuMI	CCSGG	2 cut(s)	32, 33
Bsa29I	ATCGAT	1 cut(s)	2162
BsaHI	GRCGYC	1 cut(s)	1444
BsaI	GGTCTC	2 cut(s)	992, 1535
BsaJI	CCNNGG	2 cut(s)	31, 813
BsaWI	WCCGGW	1 cut(s)	1194
BsaXI	ACNNNNNCTCC	2 cut(s)	765, 795
Bsc4I	CCNNNNNNNGG	4 cut(s)	396, 902, 1892, 2243
Bse1I	ACTGG	3 cut(s)	370, 706, 2249
Bse21I	CCTNAGG	1 cut(s)	768
Bse3DI	GCAATG	3 cut(s)	32, 183, 591
BseBI	CCWGG	1 cut(s)	1950
BseCI	ATCGAT	1 cut(s)	2162
BseDI	CCNNGG	2 cut(s)	31, 813
BseGI	GGATG	6 cut(s)	105, 1326, 1389, 1650, 1935, 1945
BseLI	CCNNNNNNNGG	4 cut(s)	396, 902, 1892, 2243
BseMI	GCAATG	3 cut(s)	32, 183, 591
BseMII	CTCAG	9 cut(s)	180, 457, 537, 663, 759, 918, 1341, 1657, 1818
BseNI	ACTGG	3 cut(s)	370, 706, 2249
BsePI	GCGCGC	1 cut(s)	1674
BseRI	GAGGAG	1 cut(s)	657
BseXI	GCAGC	8 cut(s)	362, 605, 626, 836, 1659, 1969, 2213, 2336
BseYI	CCCAGC	1 cut(s)	395
BsgI	GTGCAG	1 cut(s)	207
Bsh1236I	CGCG	7 cut(s)	92, 860, 1460, 1502, 1676, 2150, 2291
Bsh1285I	CGRYCG	3 cut(s)	1500, 1909, 2339
BshFI	GGCC	3 cut(s)	242, 1641, 1899
BshVI	ATCGAT	1 cut(s)	2162
BsiEI	CGRYCG	3 cut(s)	1500, 1909, 2339
BsiHKAI	GWGCWC	5 cut(s)	1021, 1170, 1309, 1798, 2301
BsiHKCI	CYCGRG	2 cut(s)	31, 177
BsiSI	CCGG	2 cut(s)	32, 1195
BslFI	GGGAC	3 cut(s)	673, 1044, 1455
BslI	CCNNNNNNNGG	4 cut(s)	396, 902, 1892, 2243
BsmAI	GTCTC	3 cut(s)	992, 1535, 2042
BsmFI	GGGAC	3 cut(s)	673, 1044, 1455
BsnI	GGCC	3 cut(s)	242, 1641, 1899
Bso31I	GGTCTC	2 cut(s)	992, 1535
BsoBI	CYCGRG	2 cut(s)	31, 177
Bsp1286I	GDGCHC	5 cut(s)	1021, 1170, 1309, 1798, 2301
Bsp1720I	GCTNAGC	1 cut(s)	546
Bsp68I	TCGCGA	2 cut(s)	1502, 2150
BspACI	CCGC	6 cut(s)	596, 977, 984, 1613, 2289, 2339
BspANI	GGCC	3 cut(s)	242, 1641, 1899
BspCNI	CTCAG	9 cut(s)	181, 456, 538, 662, 760, 919, 1342, 1656, 1817
BspDI	ATCGAT	1 cut(s)	2162
BspFNI	CGCG	7 cut(s)	92, 860, 1460, 1502, 1676, 2150, 2291
BspHI	TCATGA	1 cut(s)	1342
BspLI	GGNNCC	6 cut(s)	36, 61, 1090, 1110, 1763, 1840
BspMAI	CTGCAG	1 cut(s)	595
BspOI	GCTAGC	1 cut(s)	984
BspPI	GGATC	4 cut(s)	407, 948, 2078, 2312
BspQI	GCTCTTC	1 cut(s)	263
BspTI	CTTAAG	1 cut(s)	158
BspTNI	GGTCTC	2 cut(s)	992, 1535
BsrBI	CCGCTC	1 cut(s)	2341
BsrDI	GCAATG	3 cut(s)	32, 183, 591
BsrI	ACTGG	3 cut(s)	370, 706, 2249
BssECI	CCNNGG	2 cut(s)	31, 813
BssHII	GCGCGC	1 cut(s)	1674
BssNAI	GTATAC	1 cut(s)	539
BssNI	GRCGYC	1 cut(s)	1444
BssSI	CACGAG	1 cut(s)	1655
Bst1107I	GTATAC	1 cut(s)	539
Bst2BI	CACGAG	1 cut(s)	1655
Bst2UI	CCWGG	1 cut(s)	1950
Bst4CI	ACNGT	9 cut(s)	280, 814, 1023, 1084, 1311, 1379, 1488, 1966, 2234
Bst6I	CTCTTC	5 cut(s)	263, 1994, 2006, 2052, 2186
BstACI	GRCGYC	1 cut(s)	1444
BstAFI	CTTAAG	1 cut(s)	158
BstAPI	GCANNNNNTGC	2 cut(s)	590, 2207
BstDSI	CCRYGG	1 cut(s)	813
BstENI	CCTNNNNNAGG	1 cut(s)	900
BstF5I	GGATG	6 cut(s)	105, 1326, 1389, 1650, 1935, 1945
BstFNI	CGCG	7 cut(s)	92, 860, 1460, 1502, 1676, 2150, 2291
BstHHI	GCGC	5 cut(s)	94, 634, 862, 1676, 1678
BstMAI	GTCTC	3 cut(s)	992, 1535, 2042
BstMCI	CGRYCG	3 cut(s)	1500, 1909, 2339
BstMWI	GCNNNNNNNGC	6 cut(s)	590, 725, 752, 1586, 1647, 2207
BstNI	CCWGG	1 cut(s)	1950
BstSCI	CCNGG	3 cut(s)	30, 31, 1948
BstSFI	CTRYAG	1 cut(s)	591
BstUI	CGCG	7 cut(s)	92, 860, 1460, 1502, 1676, 2150, 2291
BstV1I	GCAGC	8 cut(s)	362, 605, 626, 836, 1659, 1969, 2213, 2336
BstV2I	GAAGAC	3 cut(s)	299, 481, 2364
BstX2I	RGATCY	2 cut(s)	399, 940
BstXI	CCANNNNNNTGG	1 cut(s)	1864
BstYI	RGATCY	2 cut(s)	399, 940
BstZ17I	GTATAC	1 cut(s)	539
Bsu15I	ATCGAT	1 cut(s)	2162
Bsu36I	CCTNAGG	1 cut(s)	768
BsuI	GTATCC	4 cut(s)	198, 615, 846, 1353
BsuRI	GGCC	3 cut(s)	242, 1641, 1899
BsuTUI	ATCGAT	1 cut(s)	2162
BtgI	CCRYGG	1 cut(s)	813
BtgZI	GCGATG	5 cut(s)	1475, 1517, 1709, 1754, 2131
BtsCI	GGATG	6 cut(s)	105, 1326, 1389, 1650, 1935, 1945
BtsI	GCAGTG	1 cut(s)	513
BtsIMutI	CAGTG	2 cut(s)	451, 513
BtuMI	TCGCGA	2 cut(s)	1502, 2150
CciI	TCATGA	1 cut(s)	1342
CfoI	GCGC	5 cut(s)	94, 634, 862, 1676, 1678
Cfr13I	GGNCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
Cfr9I	CCCGGG	1 cut(s)	31
ClaI	ATCGAT	1 cut(s)	2162
CseI	GACGC	4 cut(s)	768, 1452, 2265, 2280
Csp6I	GTAC	4 cut(s)	1312, 1380, 2226, 2362
CviAII	CATG	5 cut(s)	493, 1026, 1343, 1624, 1766
CviQI	GTAC	4 cut(s)	1312, 1380, 2226, 2362
Eam1104I	CTCTTC	5 cut(s)	263, 1994, 2006, 2052, 2186
EarI	CTCTTC	5 cut(s)	263, 1994, 2006, 2052, 2186
Ecl136II	GAGCTC	2 cut(s)	1168, 1796
Eco147I	AGGCCT	2 cut(s)	242, 1899
Eco24I	GRGCYC	2 cut(s)	1170, 1798
Eco31I	GGTCTC	2 cut(s)	992, 1535
Eco32I	GATATC	1 cut(s)	2143
Eco47I	GGWCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
Eco53kI	GAGCTC	2 cut(s)	1168, 1796
Eco81I	CCTNAGG	1 cut(s)	768
Eco88I	CYCGRG	2 cut(s)	31, 177
EcoICRI	GAGCTC	2 cut(s)	1168, 1796
EcoNI	CCTNNNNNAGG	1 cut(s)	900
EcoRII	CCWGG	1 cut(s)	1948
EcoRV	GATATC	1 cut(s)	2143
EcoT22I	ATGCAT	1 cut(s)	1467
EcoT38I	GRGCYC	2 cut(s)	1170, 1798
FaeI	CATG	5 cut(s)	496, 1029, 1346, 1627, 1769
FalI	AAGNNNNNCTT	2 cut(s)	257, 289
FaqI	GGGAC	3 cut(s)	673, 1044, 1455
FatI	CATG	5 cut(s)	492, 1025, 1342, 1623, 1765
FauI	CCCGC	1 cut(s)	589
FauNDI	CATATG	1 cut(s)	1664
FbaI	TGATCA	2 cut(s)	1210, 1401
FblI	GTMKAC	1 cut(s)	538
Fnu4HI	GCNGC	9 cut(s)	351, 594, 615, 825, 978, 1648, 1983, 2202, 2325
FokI	GGATG	6 cut(s)	92, 1313, 1376, 1637, 1932, 1942
FriOI	GRGCYC	2 cut(s)	1170, 1798
Fsp4HI	GCNGC	9 cut(s)	351, 594, 615, 825, 978, 1648, 1983, 2202, 2325
FspBI	CTAG	6 cut(s)	227, 326, 542, 756, 981, 1037
GlaI	GCGC	5 cut(s)	93, 633, 861, 1675, 1677
GluI	GCNGC	9 cut(s)	351, 594, 615, 825, 978, 1648, 1983, 2202, 2325
GsaI	CCCAGC	1 cut(s)	399
HaeIII	GGCC	3 cut(s)	242, 1641, 1899
HapII	CCGG	2 cut(s)	32, 1195
HgaI	GACGC	4 cut(s)	768, 1452, 2265, 2280
HhaI	GCGC	5 cut(s)	94, 634, 862, 1676, 1678
Hin1I	GRCGYC	1 cut(s)	1444
Hin1II	CATG	5 cut(s)	496, 1029, 1346, 1627, 1769
Hin6I	GCGC	5 cut(s)	92, 632, 860, 1674, 1676
HinP1I	GCGC	5 cut(s)	92, 632, 860, 1674, 1676
HindIII	AAGCTT	2 cut(s)	554, 829
HpaII	CCGG	2 cut(s)	32, 1195
HphI	GGTGA	2 cut(s)	1045, 1585
Hpy99I	CGWCG	5 cut(s)	1907, 2027, 2189, 2296, 2306
HpyAV	CCTTC	8 cut(s)	37, 73, 228, 529, 896, 1192, 1264, 1591
HpyCH4III	ACNGT	9 cut(s)	280, 814, 1023, 1084, 1311, 1379, 1488, 1966, 2234
HpyCH4IV	ACGT	2 cut(s)	15, 577
HpyF10VI	GCNNNNNNNGC	6 cut(s)	590, 725, 752, 1586, 1647, 2207
HpySE526I	ACGT	2 cut(s)	15, 577
Hsp92I	GRCGYC	1 cut(s)	1444
Hsp92II	CATG	5 cut(s)	496, 1029, 1346, 1627, 1769
HspAI	GCGC	5 cut(s)	92, 632, 860, 1674, 1676
Ksp22I	TGATCA	2 cut(s)	1210, 1401
LguI	GCTCTTC	1 cut(s)	263
LmnI	GCTCC	7 cut(s)	59, 898, 1016, 1304, 1474, 1736, 1801
Lsp1109I	GCAGC	8 cut(s)	362, 605, 626, 836, 1659, 1969, 2213, 2336
MaeI	CTAG	6 cut(s)	227, 326, 542, 756, 981, 1037
MaeII	ACGT	2 cut(s)	15, 577
MaeIII	GTNAC	6 cut(s)	16, 802, 835, 1000, 1126, 1385
MbiI	CCGCTC	1 cut(s)	2341
MfeI	CAATTG	1 cut(s)	1269
MflI	RGATCY	2 cut(s)	399, 940
MhlI	GDGCHC	5 cut(s)	1021, 1170, 1309, 1798, 2301
MluCI	AATT	2 cut(s)	1269, 1973
MlyI	GAGTC	6 cut(s)	189, 474, 1754, 1824, 2108, 2130
MmeI	TCCRAC	2 cut(s)	2170, 2233
Mph1103I	ATGCAT	1 cut(s)	1467
MroXI	GAANNNNTTC	1 cut(s)	2003
MseI	TTAA	5 cut(s)	159, 1179, 2157, 2220, 2393
MslI	CAYNNNNRTG	1 cut(s)	1024
MspA1I	CMGCKG	2 cut(s)	596, 2204
MspCI	CTTAAG	1 cut(s)	158
MspI	CCGG	2 cut(s)	32, 1195
MspR9I	CCNGG	3 cut(s)	32, 33, 1950
MunI	CAATTG	1 cut(s)	1269
MvaI	CCWGG	1 cut(s)	1950
MvnI	CGCG	7 cut(s)	92, 860, 1460, 1502, 1676, 2150, 2291
MwoI	GCNNNNNNNGC	6 cut(s)	590, 725, 752, 1586, 1647, 2207
NciI	CCSGG	2 cut(s)	32, 33
NdeI	CATATG	1 cut(s)	1664
NheI	GCTAGC	1 cut(s)	980
NlaIII	CATG	5 cut(s)	496, 1029, 1346, 1627, 1769
NlaIV	GGNNCC	6 cut(s)	36, 61, 1090, 1110, 1763, 1840
NmuCI	GTSAC	3 cut(s)	802, 835, 1126
NruI	TCGCGA	2 cut(s)	1502, 2150
NsiI	ATGCAT	1 cut(s)	1467
PagI	TCATGA	1 cut(s)	1342
PauI	GCGCGC	1 cut(s)	1674
PceI	AGGCCT	2 cut(s)	242, 1899
PciSI	GCTCTTC	1 cut(s)	263
PdmI	GAANNNNTTC	1 cut(s)	2003
PfeI	GAWTC	8 cut(s)	705, 1137, 1346, 1415, 1813, 1882, 1953, 2004
PflFI	GACNNNGTC	1 cut(s)	762
PflMI	CCANNNNNTGG	1 cut(s)	1892
PfoI	TCCNGGA	1 cut(s)	1948
PkrI	GCNGC	9 cut(s)	352, 595, 616, 826, 979, 1649, 1984, 2203, 2326
Ple19I	CGATCG	1 cut(s)	1500
PleI	GAGTC	6 cut(s)	188, 473, 1753, 1824, 2107, 2129
PpsI	GAGTC	6 cut(s)	188, 473, 1753, 1824, 2107, 2129
Psp124BI	GAGCTC	2 cut(s)	1170, 1798
Psp1406I	AACGTT	1 cut(s)	15
Psp6I	CCWGG	1 cut(s)	1948
PspFI	CCCAGC	1 cut(s)	395
PspGI	CCWGG	1 cut(s)	1948
PspN4I	GGNNCC	6 cut(s)	36, 61, 1090, 1110, 1763, 1840
PspPI	GGNCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
PstI	CTGCAG	1 cut(s)	595
PsuI	RGATCY	2 cut(s)	399, 940
PsyI	GACNNNGTC	1 cut(s)	762
PteI	GCGCGC	1 cut(s)	1674
PvuI	CGATCG	1 cut(s)	1500
PvuII	CAGCTG	1 cut(s)	2204
RgaI	GCGATCGC	1 cut(s)	1500
RruI	TCGCGA	2 cut(s)	1502, 2150
RsaI	GTAC	4 cut(s)	1313, 1381, 2227, 2363
RsaNI	GTAC	4 cut(s)	1312, 1380, 2226, 2362
RseI	CAYNNNNRTG	1 cut(s)	1024
SacI	GAGCTC	2 cut(s)	1170, 1798
SapI	GCTCTTC	1 cut(s)	263
SaqAI	TTAA	5 cut(s)	159, 1179, 2157, 2220, 2393
SatI	GCNGC	9 cut(s)	351, 594, 615, 825, 978, 1648, 1983, 2202, 2325
Sau96I	GGNCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
SchI	GAGTC	6 cut(s)	189, 474, 1754, 1824, 2108, 2130
ScrFI	CCNGG	3 cut(s)	32, 33, 1950
SduI	GDGCHC	5 cut(s)	1021, 1170, 1309, 1798, 2301
SfaAI	GCGATCGC	1 cut(s)	1500
SfcI	CTRYAG	1 cut(s)	591
SgfI	GCGATCGC	1 cut(s)	1500
SinI	GGWCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
SmaI	CCCGGG	1 cut(s)	33
SmiMI	CAYNNNNRTG	1 cut(s)	1024
SmlI	CTYRAG	2 cut(s)	158, 335
SmoI	CTYRAG	2 cut(s)	158, 335
Sse9I	AATT	2 cut(s)	1269, 1973
SseBI	AGGCCT	2 cut(s)	242, 1899
SsiI	CCGC	6 cut(s)	596, 977, 984, 1613, 2289, 2339
SspMI	CTAG	6 cut(s)	227, 326, 542, 756, 981, 1037
SstI	GAGCTC	2 cut(s)	1170, 1798
StuI	AGGCCT	2 cut(s)	242, 1899
StyD4I	CCNGG	3 cut(s)	30, 31, 1948
TaaI	ACNGT	9 cut(s)	280, 814, 1023, 1084, 1311, 1379, 1488, 1966, 2234
TaiI	ACGT	2 cut(s)	18, 580
TaqI	TCGA	9 cut(s)	468, 1094, 1413, 1519, 1551, 1584, 1902, 2007, 2162
TaqII	GACCGA	1 cut(s)	1923
TasI	AATT	2 cut(s)	1269, 1973
TatI	WGTACW	1 cut(s)	2225
TauI	GCSGC	1 cut(s)	980
TfiI	GAWTC	8 cut(s)	705, 1137, 1346, 1415, 1813, 1882, 1953, 2004
Tru1I	TTAA	5 cut(s)	159, 1179, 2157, 2220, 2393
Tru9I	TTAA	5 cut(s)	159, 1179, 2157, 2220, 2393
TscAI	CASTG	2 cut(s)	451, 520
TseFI	GTSAC	3 cut(s)	802, 835, 1126
TseI	GCWGC	8 cut(s)	350, 593, 614, 824, 1647, 1982, 2201, 2324
Tsp45I	GTSAC	3 cut(s)	802, 835, 1126
TspDTI	ATGAA	7 cut(s)	56, 481, 1160, 1246, 1782, 1946, 2093
TspGWI	ACGGA	3 cut(s)	1577, 1698, 1749
TspMI	CCCGGG	1 cut(s)	31
TspRI	CASTG	2 cut(s)	451, 520
Tth111I	GACNNNGTC	1 cut(s)	762
Van91I	CCANNNNNTGG	1 cut(s)	1892
Vha464I	CTTAAG	1 cut(s)	158
VpaK11BI	GGWCC	6 cut(s)	35, 215, 905, 1192, 1564, 2246
XagI	CCTNNNNNAGG	1 cut(s)	900
XapI	RAATTY	1 cut(s)	1973
XmaI	CCCGGG	1 cut(s)	31
XmiI	GTMKAC	1 cut(s)	538
XmnI	GAANNNNTTC	1 cut(s)	2003
XspI	CTAG	6 cut(s)	227, 326, 542, 756, 981, 1037
Zsp2I	ATGCAT	1 cut(s)	1467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.