Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004570

Physical Location & Seq

Genomic Coordinates Reverse (-)

38259834 .. 38262437

Gene Structure 2604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0222700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGCATCTTTCTCATTATTCTTCTCCATTTTCATCGTCACCTTCTCACCAACCTTGTGCCTGAACCGGTACCATCCCCTAGACCCTCTAACCCAGTCGGAGTTCAATCAGATCAAATCCATAATTCAAAGCTCATACCCCTCTCAAAACCTCACGTTCCAATATGTCGGGTTAGACGAGCCAGAGAAGTCCACCGTCCTCTTATGGAATTCCAAATCCACAGCCAAATCCTACCCTCCTCGCCGAGCCTCAGTCGTTACAAGACTAAACAAACAGACCCACGAGATTATAGTCGATTTATCAACCCATTCCATTCTCTCTAGTAAAGTTCACATGGGAAATGGCTACCCTCTGCTAACCGTAGACGAACAAACACTTGCAAATGAGTTGCCTTTTAATTATCAACCATTCATTCAATCCATTAAAAGGAGAGGGCTTAATATATCCCAAGTTGTGTGTAGCGGTTTTACAGTTGGTTGGTTCGGAGAGGGAAAGACTAGAAGAATAATAAAGATTAATTGTTTTTACACAAATGGGACAGTGAACTTGTTTGTGAGGCCAGTGGAGGGAATAACGTTGGTTGTTGATCTTGATATAATGAAGATAGTTCAATACAGTGACAGGGGTGTAGTTCCGGTGCCAAGGGGAGAGAGAACCGAGTACCGGGCCTCAAAGCAGAAGCCGCCTTTTGGTCCACGACTAAATGGTGCTTCAGTGTTGTCTGAGGGAGATGGGTTCGTCCTCGACGGGAACATTATCAGATGGGCCAACTGGATTTTTCATCTCGGATTTGATGTTCGAACTGGAACAATTATATCTCAAGCATCAATTTACGATCTGGACAAGAAGAAATACAGGAGAGTTTTGTACAGAGGGTTTGTCTCAGAGCTGTTTGTGCCTTACATGAACCCAACTGCTGACTGGTACTACAAAACCTTCTTTGACAATGGAGAGTTTGGGTTCGGCCAAAGTTCTGTCTCACTTGAACCATTGACTGATTGTCCTAACAATGCAAAGTTCATAGATGCCTACTATGCTTCACAAGAAGGCACACCTGTGAAGATATCGAATGCTATATGTATCTTTGAACGGCATGCAGGAAACATCTTGTGGCGTCACACAGAAGTTACCATCCCAGATGAAGTGAATAAATTGCACATAACGGAGGTGAGGTCGGAGGTGACCCTAGTGGTGAGGATGATTGCAGTTGTGGGCAACTATGACTACATAATCGATTGGGAATTCAAACCAAGTGGATCCATAAAACTTGAGGTTGGGCTCACCGGTGTGCTAGAAACTGAAGGGGTCACATACACCCACAAAGACCAAATAAACGAAGAAGTTTATGGTACACTAGTTACAGATAACACAATTGCTGTGAATCATGACCACTTCTTGACTTACTATCTTGACCTTGATGTGGACGGTGAAGCCAACTCTTTTGTTAAGAACAATTTGGTGACCACACGTGTGACAGACCGGAGTATCCCAAGAAAGAGTTATTGGACAGTGGTAAGCGAGACTGCTAAGACGGAATCAGATGCAAAAATTCATTTGGGTTTGAAGCCGTCTGAACTAGTCGTGGTGAACCCTAATAAAAGGACCAAACCTGGGAATTCTGTCGGTTATCGCTTGATTCCAGGATCAGTTGCAGCACCCCTTCTGTTAGAGGATGATTACCCTCAAATTCGGGGTGCTTTTACTAAGTACAATGTGTGGGTTACACCGTATAACAAGTCTGAAAAATGGGCAGGAGGAAAATATGTTGACCAAAGCCGAGGAGGTGATACCTTAGCAGTTTGGAGTCTCAGGGATAGGGAAATTGAGAACAAAGACATAGTGCTGTGGTACACAATTGGCTTTCACCATGCTCCTTGCCAGGAAGACTTTCCAATGATGCCAACATTAAGTGGTGGATTTGAGCTCCGGCCAACCAATTTCTTTGAGCGCAGTCCGGTGCTTAAAGTTAGAATAACACCACCTCCTAAGCATGCGGACTCCCCTAACTGCACCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0031410 GO:0031982 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0097708 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

672

Amino Acids

76.1

Weight (kDa)

7.24

Isoelectric Point (pI)

38.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	25 - 109	2.7e-19	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	117 - 213	4.1e-22	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	241 - 654	6.6e-136	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17630 AT3G17630
fragaria_vesca	FvH4_4g21880
malus_domestica	MD13G1136000.v1.1 MD16G1131400.v1.1
prunus_persica	Prupe.1G209400_v2.0.a1
pyrus_communis	pycom16g11580
rosa_chinensis	RchiOBHm_Chr3g0483861
rosa_laevigata	RLG00000007178 RLG00000023257
rosa_multiflora	Rmu_co8183874.1_g000001 Rmu_co8462775.1_g000001 Rmu_sc0004940.1_g000012 Rmu_sc0005901.1_g000001 Rmu_sc0009599.1_g000012
rosa_roxburghii	Rroxscaffold_5G00369850 Rroxscaffold_6G00398090
rosa_rugosa	Rorug03G0208200.1 Rorug03G0208300 Rorug04G0222700 Rorug04G0222800
rosa_samantha	Rh3AG257000 Rh3BG293400 Rh3CG291700 Rh3DG286700 Rh4AG279900 Rh4AG280100 Rh4BG285300 Rh4BG285500 Rh4CG300900
rosa_wichuraiana	Rw3G023230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	69
AccB1I	GGYRCC	2 cut(s)	69, 637
AccI	GTMKAC	1 cut(s)	363
AciI	CCGC	3 cut(s)	462, 683, 1994
AclI	AACGTT	1 cut(s)	575
AclWI	GGATC	3 cut(s)	1251, 1264, 1651
AcoI	YGGCCR	2 cut(s)	964, 1928
AcsI	RAATTY	5 cut(s)	208, 1241, 1548, 1615, 1686
AcuI	CTGAAG	2 cut(s)	696, 1320
AcvI	CACGTG	1 cut(s)	1469
AcyI	GRCGYC	1 cut(s)	1114
AfaI	GTAC	7 cut(s)	71, 662, 869, 926, 1351, 1709, 1850
AfiI	CCNNNNNNNGG	6 cut(s)	426, 566, 663, 689, 1420, 1611
AflIII	ACRYGT	2 cut(s)	1466, 1468
AgeI	ACCGGT	2 cut(s)	66, 1283
AgsI	TTSAA	8 cut(s)	106, 128, 416, 611, 986, 1088, 1246, 1564
AhdI	GACNNNNNGTC	1 cut(s)	999
AhlI	ACTAGT	2 cut(s)	1354, 1576
AjnI	CCWGG	3 cut(s)	1609, 1639, 1878
AjuI	GAANNNNNNNTTGG	2 cut(s)	1486, 1518
AleI	CACNNNNGTG	3 cut(s)	1055, 1286, 1469
AloI	GAACNNNNNNTCC	2 cut(s)	780, 812
AluBI	AGCT	3 cut(s)	132, 889, 1924
AluI	AGCT	3 cut(s)	132, 889, 1924
Alw21I	GWGCWC	1 cut(s)	1926
Alw26I	GTCTC	4 cut(s)	886, 982, 1514, 1811
AlwI	GGATC	3 cut(s)	1251, 1264, 1651
AoxI	GGCC	5 cut(s)	557, 666, 765, 964, 1928
ApeKI	GCWGC	1 cut(s)	1652
ApoI	RAATTY	5 cut(s)	208, 1241, 1548, 1615, 1686
AseI	ATTAAT	1 cut(s)	516
AsiGI	ACCGGT	2 cut(s)	66, 1283
Asp700I	GAANNNNTTC	1 cut(s)	1887
Asp718I	GGTACC	1 cut(s)	69
AspLEI	GCGC	1 cut(s)	1950
AspS9I	GGNCC	4 cut(s)	666, 692, 765, 1602
AsuC2I	CCSGG	1 cut(s)	665
AsuII	TTCGAA	1 cut(s)	799
AvaII	GGWCC	2 cut(s)	692, 1602
BaeI	ACNNNNGTAYC	4 cut(s)	1341, 1374, 1468, 1501
BamHI	GGATCC	1 cut(s)	1256
BanI	GGYRCC	2 cut(s)	69, 637
BanII	GRGCYC	2 cut(s)	1281, 1926
BauI	CACGAG	1 cut(s)	281
BbrPI	CACGTG	1 cut(s)	1469
BbsI	GAAGAC	1 cut(s)	1890
Bbv12I	GWGCWC	1 cut(s)	1926
BbvI	GCAGC	1 cut(s)	1664
BccI	CCATC	4 cut(s)	81, 725, 756, 1139
BceAI	ACGGC	2 cut(s)	1106, 1552
BciT130I	CCWGG	3 cut(s)	1611, 1641, 1880
BciVI	GTATCC	1 cut(s)	1496
BcnI	CCSGG	1 cut(s)	665
BcoDI	GTCTC	4 cut(s)	886, 982, 1514, 1811
BcuI	ACTAGT	2 cut(s)	1354, 1576
BfaI	CTAG	7 cut(s)	80, 321, 498, 1187, 1292, 1355, 1577
BfuI	GTATCC	1 cut(s)	1496
BisI	GCNGC	2 cut(s)	683, 1653
BlsI	GCNGC	2 cut(s)	684, 1654
Bme1390I	CCNGG	4 cut(s)	665, 1611, 1641, 1880
Bme18I	GGWCC	2 cut(s)	692, 1602
BmeRI	GACNNNNNGTC	1 cut(s)	999
BmgT120I	GGNCC	4 cut(s)	666, 692, 765, 1602
BmiI	GGNNCC	3 cut(s)	71, 639, 1258
BmrFI	CCNGG	4 cut(s)	665, 1611, 1641, 1880
BmrI	ACTGGG	1 cut(s)	88
BmsI	GCATC	5 cut(s)	14, 833, 1015, 1531, 1887
BmuI	ACTGGG	1 cut(s)	88
BpiI	GAAGAC	1 cut(s)	1890
Bpu10I	CCTNAGC	2 cut(s)	1792, 1986
Bpu14I	TTCGAA	1 cut(s)	799
BpuEI	CTTGAG	2 cut(s)	804, 1289
BpuMI	CCSGG	1 cut(s)	665
Bsa29I	ATCGAT	1 cut(s)	1233
BsaAI	YACGTR	1 cut(s)	1469
BsaHI	GRCGYC	1 cut(s)	1114
BsaJI	CCNNGG	3 cut(s)	641, 1610, 1777
BsaWI	WCCGGW	5 cut(s)	66, 634, 1283, 1479, 1954
BsaXI	ACNNNNNCTCC	4 cut(s)	1157, 1187, 1966, 1996
Bsc4I	CCNNNNNNNGG	6 cut(s)	426, 566, 663, 689, 1420, 1611
Bse118I	RCCGGY	2 cut(s)	66, 1283
Bse1I	ACTGG	5 cut(s)	94, 560, 776, 808, 926
BseBI	CCWGG	3 cut(s)	1611, 1641, 1880
BseCI	ATCGAT	1 cut(s)	1233
BseDI	CCNNGG	3 cut(s)	641, 1610, 1777
BseGI	GGATG	4 cut(s)	73, 1131, 1203, 1678
BseLI	CCNNNNNNNGG	6 cut(s)	426, 566, 663, 689, 1420, 1611
BseMII	CTCAG	4 cut(s)	264, 714, 897, 1822
BseNI	ACTGG	5 cut(s)	94, 560, 776, 808, 926
BseRI	GAGGAG	2 cut(s)	228, 1794
BseXI	GCAGC	1 cut(s)	1664
BsgI	GTGCAG	1 cut(s)	1993
BshFI	GGCC	5 cut(s)	559, 668, 767, 966, 1930
BshNI	GGYRCC	2 cut(s)	69, 637
BshTI	ACCGGT	2 cut(s)	66, 1283
BshVI	ATCGAT	1 cut(s)	1233
BsiHKAI	GWGCWC	1 cut(s)	1926
BsiSI	CCGG	7 cut(s)	67, 635, 664, 1284, 1480, 1927, 1955
BslFI	GGGAC	1 cut(s)	550
BslI	CCNNNNNNNGG	6 cut(s)	426, 566, 663, 689, 1420, 1611
BsmAI	GTCTC	4 cut(s)	886, 982, 1514, 1811
BsmFI	GGGAC	1 cut(s)	550
BsmI	GAATGC	1 cut(s)	1075
BsnI	GGCC	5 cut(s)	559, 668, 767, 966, 1930
Bsp119I	TTCGAA	1 cut(s)	799
Bsp1286I	GDGCHC	2 cut(s)	1281, 1926
Bsp1407I	TGTACA	1 cut(s)	867
Bsp143I	GATC	5 cut(s)	111, 586, 835, 1256, 1643
BspACI	CCGC	3 cut(s)	462, 683, 1994
BspANI	GGCC	5 cut(s)	559, 668, 767, 966, 1930
BspCNI	CTCAG	4 cut(s)	263, 715, 896, 1821
BspDI	ATCGAT	1 cut(s)	1233
BspHI	TCATGA	1 cut(s)	1384
BspLI	GGNNCC	3 cut(s)	71, 639, 1258
BspPI	GGATC	3 cut(s)	1251, 1264, 1651
BspT104I	TTCGAA	1 cut(s)	799
BspT107I	GGYRCC	2 cut(s)	69, 637
BsrFI	RCCGGY	2 cut(s)	66, 1283
BsrGI	TGTACA	1 cut(s)	867
BsrI	ACTGG	5 cut(s)	94, 560, 776, 808, 926
BssAI	RCCGGY	2 cut(s)	66, 1283
BssECI	CCNNGG	3 cut(s)	641, 1610, 1777
BssMI	GATC	5 cut(s)	111, 586, 835, 1256, 1643
BssNI	GRCGYC	1 cut(s)	1114
BssSI	CACGAG	1 cut(s)	281
BssT1I	CCWWGG	1 cut(s)	641
Bst2BI	CACGAG	1 cut(s)	281
Bst2UI	CCWGG	3 cut(s)	1611, 1641, 1880
Bst4CI	ACNGT	8 cut(s)	196, 361, 472, 541, 617, 1427, 1510, 1728
BstACI	GRCGYC	1 cut(s)	1114
BstAUI	TGTACA	1 cut(s)	867
BstBAI	YACGTR	1 cut(s)	1469
BstBI	TTCGAA	1 cut(s)	799
BstC8I	GCNNGC	2 cut(s)	1095, 1992
BstDEI	CTNAG	8 cut(s)	250, 723, 883, 1527, 1704, 1792, 1808, 1986
BstEII	GGTNACC	2 cut(s)	1180, 1459
BstF5I	GGATG	4 cut(s)	73, 1131, 1203, 1678
BstHHI	GCGC	1 cut(s)	1950
BstKTI	GATC	5 cut(s)	114, 589, 838, 1259, 1646
BstMAI	GTCTC	4 cut(s)	886, 982, 1514, 1811
BstMBI	GATC	5 cut(s)	111, 586, 835, 1256, 1643
BstMWI	GCNNNNNNNGC	3 cut(s)	682, 895, 1034
BstNI	CCWGG	3 cut(s)	1611, 1641, 1880
BstNSI	RCATGY	2 cut(s)	1097, 1994
BstPI	GGTNACC	2 cut(s)	1180, 1459
BstSCI	CCNGG	4 cut(s)	663, 1609, 1639, 1878
BstV1I	GCAGC	1 cut(s)	1664
BstV2I	GAAGAC	1 cut(s)	1890
BstX2I	RGATCY	1 cut(s)	1256
BstYI	RGATCY	1 cut(s)	1256
Bsu15I	ATCGAT	1 cut(s)	1233
BsuI	GTATCC	1 cut(s)	1496
BsuRI	GGCC	5 cut(s)	559, 668, 767, 966, 1930
BsuTUI	ATCGAT	1 cut(s)	1233
BtsCI	GGATG	4 cut(s)	73, 1131, 1203, 1678
BtsIMutI	CAGTG	5 cut(s)	546, 567, 622, 720, 1515
Cac8I	GCNNGC	2 cut(s)	1095, 1992
CciI	TCATGA	1 cut(s)	1384
CfoI	GCGC	1 cut(s)	1950
Cfr10I	RCCGGY	2 cut(s)	66, 1283
Cfr13I	GGNCC	4 cut(s)	666, 692, 765, 1602
ClaI	ATCGAT	1 cut(s)	1233
CseI	GACGC	1 cut(s)	1103
Csp6I	GTAC	7 cut(s)	70, 661, 868, 925, 1350, 1708, 1849
CspAI	ACCGGT	2 cut(s)	66, 1283
CspCI	CAANNNNNGTGG	2 cut(s)	1234, 1269
CviAII	CATG	6 cut(s)	334, 904, 1094, 1385, 1868, 1991
CviQI	GTAC	7 cut(s)	70, 661, 868, 925, 1350, 1708, 1849
DdeI	CTNAG	8 cut(s)	250, 723, 883, 1527, 1704, 1792, 1808, 1986
DpnI	GATC	5 cut(s)	113, 588, 837, 1258, 1645
DpnII	GATC	5 cut(s)	111, 586, 835, 1256, 1643
DriI	GACNNNNNGTC	1 cut(s)	999
EaeI	YGGCCR	2 cut(s)	964, 1928
Eam1105I	GACNNNNNGTC	1 cut(s)	999
Ecl136II	GAGCTC	1 cut(s)	1924
Eco130I	CCWWGG	1 cut(s)	641
Eco24I	GRGCYC	2 cut(s)	1281, 1926
Eco32I	GATATC	1 cut(s)	1065
Eco47I	GGWCC	2 cut(s)	692, 1602
Eco53kI	GAGCTC	1 cut(s)	1924
Eco57I	CTGAAG	2 cut(s)	696, 1320
Eco72I	CACGTG	1 cut(s)	1469
Eco91I	GGTNACC	2 cut(s)	1180, 1459
EcoICRI	GAGCTC	1 cut(s)	1924
EcoO65I	GGTNACC	2 cut(s)	1180, 1459
EcoRI	GAATTC	3 cut(s)	208, 1241, 1615
EcoRII	CCWGG	3 cut(s)	1609, 1639, 1878
EcoRV	GATATC	1 cut(s)	1065
EcoT14I	CCWWGG	1 cut(s)	641
EcoT38I	GRGCYC	2 cut(s)	1281, 1926
ErhI	CCWWGG	1 cut(s)	641
FaeI	CATG	6 cut(s)	337, 907, 1097, 1388, 1871, 1994
FaqI	GGGAC	1 cut(s)	550
FatI	CATG	6 cut(s)	333, 903, 1093, 1384, 1867, 1990
FblI	GTMKAC	1 cut(s)	363
Fnu4HI	GCNGC	2 cut(s)	683, 1653
FokI	GGATG	4 cut(s)	60, 1118, 1210, 1685
FriOI	GRGCYC	2 cut(s)	1281, 1926
Fsp4HI	GCNGC	2 cut(s)	683, 1653
FspBI	CTAG	7 cut(s)	80, 321, 498, 1187, 1292, 1355, 1577
GlaI	GCGC	1 cut(s)	1949
GluI	GCNGC	2 cut(s)	683, 1653
HaeIII	GGCC	5 cut(s)	559, 668, 767, 966, 1930
HapII	CCGG	7 cut(s)	67, 635, 664, 1284, 1480, 1927, 1955
HgaI	GACGC	1 cut(s)	1103
HhaI	GCGC	1 cut(s)	1950
Hin1I	GRCGYC	1 cut(s)	1114
Hin1II	CATG	6 cut(s)	337, 907, 1097, 1388, 1871, 1994
Hin6I	GCGC	1 cut(s)	1948
HinP1I	GCGC	1 cut(s)	1948
HincII	GTYRAC	1 cut(s)	1768
HindII	GTYRAC	1 cut(s)	1768
HinfI	GANTC	5 cut(s)	1381, 1535, 1636, 1804, 1997
HpaII	CCGG	7 cut(s)	67, 635, 664, 1284, 1480, 1927, 1955
Hpy188III	TCNNGA	5 cut(s)	590, 839, 1385, 1396, 1409
Hpy99I	CGWCG	1 cut(s)	749
HpyAV	CCTTC	5 cut(s)	52, 946, 1040, 1295, 1670
HpyCH4III	ACNGT	8 cut(s)	196, 361, 472, 541, 617, 1427, 1510, 1728
HpyCH4IV	ACGT	3 cut(s)	155, 575, 1468
HpyCH4V	TGCA	8 cut(s)	380, 1013, 1097, 1156, 1205, 1544, 1652, 2010
HpyF10VI	GCNNNNNNNGC	3 cut(s)	682, 895, 1034
HpyF3I	CTNAG	8 cut(s)	250, 723, 883, 1527, 1704, 1792, 1808, 1986
HpySE526I	ACGT	3 cut(s)	155, 575, 1468
Hsp92I	GRCGYC	1 cut(s)	1114
Hsp92II	CATG	6 cut(s)	337, 907, 1097, 1388, 1871, 1994
HspAI	GCGC	1 cut(s)	1948
KpnI	GGTACC	1 cut(s)	73
Kzo9I	GATC	5 cut(s)	111, 586, 835, 1256, 1643
LmnI	GCTCC	2 cut(s)	1876, 1929
Lsp1109I	GCAGC	1 cut(s)	1664
LweI	GCATC	5 cut(s)	14, 833, 1015, 1531, 1887
MaeI	CTAG	7 cut(s)	80, 321, 498, 1187, 1292, 1355, 1577
MaeII	ACGT	3 cut(s)	155, 575, 1468
MalI	GATC	5 cut(s)	113, 588, 837, 1258, 1645
MboI	GATC	5 cut(s)	111, 586, 835, 1256, 1643
MboII	GAAGA	7 cut(s)	13, 513, 613, 859, 1072, 1349, 1895
MfeI	CAATTG	2 cut(s)	1371, 1854
MflI	RGATCY	1 cut(s)	1256
MhlI	GDGCHC	2 cut(s)	1281, 1926
MlyI	GAGTC	2 cut(s)	1813, 1991
MmeI	TCCRAC	2 cut(s)	78, 1155
MroXI	GAANNNNTTC	1 cut(s)	1887
MseI	TTAA	7 cut(s)	396, 423, 438, 516, 1446, 1907, 1962
MslI	CAYNNNNRTG	3 cut(s)	1055, 1286, 1469
MspI	CCGG	7 cut(s)	67, 635, 664, 1284, 1480, 1927, 1955
MspR9I	CCNGG	4 cut(s)	665, 1611, 1641, 1880
MunI	CAATTG	2 cut(s)	1371, 1854
Mva1269I	GAATGC	1 cut(s)	1075
MvaI	CCWGG	3 cut(s)	1611, 1641, 1880
MwoI	GCNNNNNNNGC	3 cut(s)	682, 895, 1034
NciI	CCSGG	1 cut(s)	665
NdeII	GATC	5 cut(s)	111, 586, 835, 1256, 1643
NlaIII	CATG	6 cut(s)	337, 907, 1097, 1388, 1871, 1994
NlaIV	GGNNCC	3 cut(s)	71, 639, 1258
NmeAIII	GCCGAG	2 cut(s)	269, 1802
NmuCI	GTSAC	7 cut(s)	37, 617, 1115, 1180, 1306, 1459, 1471
NspI	RCATGY	2 cut(s)	1097, 1994
NspV	TTCGAA	1 cut(s)	799
OliI	CACNNNNGTG	3 cut(s)	1055, 1286, 1469
PaeI	GCATGC	2 cut(s)	1097, 1994
PagI	TCATGA	1 cut(s)	1384
PcsI	WCGNNNNNNNCGW	1 cut(s)	174
PctI	GAATGC	1 cut(s)	1075
PdmI	GAANNNNTTC	1 cut(s)	1887
PfeI	GAWTC	3 cut(s)	1381, 1535, 1636
PfoI	TCCNGGA	1 cut(s)	1639
PinAI	ACCGGT	2 cut(s)	66, 1283
PkrI	GCNGC	2 cut(s)	684, 1654
PleI	GAGTC	2 cut(s)	1812, 1991
PmaCI	CACGTG	1 cut(s)	1469
PmlI	CACGTG	1 cut(s)	1469
PpsI	GAGTC	2 cut(s)	1812, 1991
Ppu21I	YACGTR	1 cut(s)	1469
PshBI	ATTAAT	1 cut(s)	516
Psp124BI	GAGCTC	1 cut(s)	1926
Psp1406I	AACGTT	1 cut(s)	575
Psp6I	CCWGG	3 cut(s)	1609, 1639, 1878
PspCI	CACGTG	1 cut(s)	1469
PspEI	GGTNACC	2 cut(s)	1180, 1459
PspGI	CCWGG	3 cut(s)	1609, 1639, 1878
PspN4I	GGNNCC	3 cut(s)	71, 639, 1258
PspPI	GGNCC	4 cut(s)	666, 692, 765, 1602
PsuI	RGATCY	1 cut(s)	1256
RsaI	GTAC	7 cut(s)	71, 662, 869, 926, 1351, 1709, 1850
RsaNI	GTAC	7 cut(s)	70, 661, 868, 925, 1350, 1708, 1849
RseI	CAYNNNNRTG	3 cut(s)	1055, 1286, 1469
SacI	GAGCTC	1 cut(s)	1926
SaqAI	TTAA	7 cut(s)	396, 423, 438, 516, 1446, 1907, 1962
SatI	GCNGC	2 cut(s)	683, 1653
Sau3AI	GATC	5 cut(s)	111, 586, 835, 1256, 1643
Sau96I	GGNCC	4 cut(s)	666, 692, 765, 1602
SchI	GAGTC	2 cut(s)	1813, 1991
ScrFI	CCNGG	4 cut(s)	665, 1611, 1641, 1880
SduI	GDGCHC	2 cut(s)	1281, 1926
SfaNI	GCATC	5 cut(s)	14, 833, 1015, 1531, 1887
SfuI	TTCGAA	1 cut(s)	799
SgrAI	CRCCGGYG	1 cut(s)	1283
SinI	GGWCC	2 cut(s)	692, 1602
SmiMI	CAYNNNNRTG	3 cut(s)	1055, 1286, 1469
SmlI	CTYRAG	2 cut(s)	819, 1268
SmoI	CTYRAG	2 cut(s)	819, 1268
SpeI	ACTAGT	2 cut(s)	1354, 1576
SphI	GCATGC	2 cut(s)	1097, 1994
SsiI	CCGC	3 cut(s)	462, 683, 1994
SspMI	CTAG	7 cut(s)	80, 321, 498, 1187, 1292, 1355, 1577
SstI	GAGCTC	1 cut(s)	1926
StyD4I	CCNGG	4 cut(s)	663, 1609, 1639, 1878
StyI	CCWWGG	1 cut(s)	641
TaaI	ACNGT	8 cut(s)	196, 361, 472, 541, 617, 1427, 1510, 1728
TaiI	ACGT	3 cut(s)	158, 578, 1471
TaqI	TCGA	5 cut(s)	294, 744, 799, 1067, 1233
TatI	WGTACW	2 cut(s)	867, 1707
TauI	GCSGC	1 cut(s)	685
TfiI	GAWTC	3 cut(s)	1381, 1535, 1636
Tru1I	TTAA	7 cut(s)	396, 423, 438, 516, 1446, 1907, 1962
Tru9I	TTAA	7 cut(s)	396, 423, 438, 516, 1446, 1907, 1962
TscAI	CASTG	5 cut(s)	546, 567, 622, 720, 1515
TseFI	GTSAC	7 cut(s)	37, 617, 1115, 1180, 1306, 1459, 1471
TseI	GCWGC	1 cut(s)	1652
Tsp45I	GTSAC	7 cut(s)	37, 617, 1115, 1180, 1306, 1459, 1471
TspDTI	ATGAA	8 cut(s)	22, 400, 614, 770, 920, 1009, 1155, 1541
TspGWI	ACGGA	2 cut(s)	1178, 1547
TspRI	CASTG	5 cut(s)	546, 567, 622, 720, 1515
VpaK11BI	GGWCC	2 cut(s)	692, 1602
VspI	ATTAAT	1 cut(s)	516
XapI	RAATTY	5 cut(s)	208, 1241, 1548, 1615, 1686
XceI	RCATGY	2 cut(s)	1097, 1994
XcmI	CCANNNNNNNNNTGG	1 cut(s)	918
XmiI	GTMKAC	1 cut(s)	363
XmnI	GAANNNNTTC	1 cut(s)	1887
XspI	CTAG	7 cut(s)	80, 321, 498, 1187, 1292, 1355, 1577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.