Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0004570

Physical Location & Seq

Genomic Coordinates Forward (+)

24854068 .. 24857380

Gene Structure 3313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g21880.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGCGTCGCCACCGCCATCAAAGCCCATGAAGGCCACGTCGAATGGATCTTTCCAGGGCGATAGTCCACTTGATTACGCTCTTCCATTACTCATCCTTCAGATCATCTTGGTCGTTGTGTTCACTAGGTGTCTTGCATATATTCTTAAACCTCTCCGACAACCCCGAGTTATAGCGGAAGTTATCGGTGGAATTCTACTGGGCCCCTCAGCATTAGGGCGGAACAAGGCCTTTCTGAATGGGATTTTCCCGCCAAAAGGGATGACGGTGCTAGAAACGGTGGCCAACATAGGCCTCTGCTTCTTCTTGTTCCTCGTCGGCCTCGAGCTCGACTTCAACTCCATCCGCCGCACTGGAAAGAAGTCCCTCGGCATCGCTATCTGCGGCATCACCCTCCCCTTCGTCCTCGGCATCGCCACCTCCGCCATCCTACGCGCCACCATCTCGAAAGGCGTGCAACATGGCCCCTTCCTCGTCTTCAATGGCGTCGCCCTCTCCATCACCGCCTTCCCCGTCCTCGCCCGCATCCTCGCCGAGCTCAAGCTCCTCACTACCGACGTCGGCCGCATCGCCATGTCCGCCGCCGCAGTCAACGACGTCGCCGCTTGGATCCTCCTCGCCCTCGCCATTGCCCTCACCGGCACCCACTCCCCTCTCGTCTCCGTTTGGGTCCTCCTCTGCGGCGCCGGCTTCGTCGGGTTCGCCGTCGTCGCCATCCTCCCCTTACTCGCCATGATGGCGCGGAAGTCCCCCGACGGCGAACCAGTCAAGGAGCTCTACATCTGCGTCACACTCTCCATTGTCTTGGCCGCAGCGTTCGTGACGGACACGATAGGGATACACGCGCTGTTCGGCGCGTTCGTGGTGGGGATCATAATGCCGAAGGAGGGTCCGTTCGCCGGAGTGTTGATAGAGAAGATTGAGGATTTGGTTTCCGGGCTTTTCTTGCCGCTTTATTTTGTGTCAAGTGGGCTCAAGACCAACGTGGCCACCATTAGTGGAGCGCAGTCGTGGGGTTTGCTGGTGCTGGTGATATTCACGGCGTCGTTTGGGAAAATTGTGGGGACTGTGGCCTTGTCCTTGTTTTTTAAGGTGCCTCTCAGGGAGGCCGTGGCGCTTGGGGTGCTTATGAATACCAAAGGCTTGGTGGAGCTCATCGTCCTCAATATTGGCAAAGATAGAAAGGTACTGAACGACCAGACTTTTGCCATCTTTGTTATGATGGCGTTGTTCACCACCTTCATCACCACACCACTAGTGATGGCAGTGTACAAGCCAGCACGCAAGGGAGCTCCTTACAAATTACGCACCATCTTCCGCAAAAATCCCGACACCGAGCTTCGAATTTTGGCATGCTTCCACACCACCCGCAACATTCCCACCATGATCAACATCATCGAGTCGTCCCGCGGCACCCGCAAGCGCGGACGACTCACTGTCTACGCCATGCACCTCATGGAGCTCTCAGAGCGGTCCTCCGCGATCTCCATGGTTCACAAAGCCCGCCACAATGGCCTCCCGTTTTGGAACAAGAAAAGTGATAACAAGGACCAAATGGTGATCGCTTTCGAGGCCTACGAGCAGCTCAGCACCGTCAAAATTCGTCCGGCCACCGCCATCTCTTCTTTGAACAACATGCACGAGGACATATGCGCCTGTGCGCACCAAAAAACCGCGGCAATGATATTGTTGCCTTTTCACAAGCACCAGAGGCTGGACGGAACCATGGAGTCTTTGGGACACTCATTTCAAGTGGTGAACGAGCGCGTCCTCCGACATGCGCCTTGTTCCGTTGGGATCCTAGTCGACAGAGGACTCGGTGGCACCACGCAGGTCTCGGCCAGCGACGTGTCGTATACGGCGCTGGTGGCGTTCTTCGGAGGACGAGATGACCGGGAGGCACTGGCCTACGGTATGAGACTGGCTGAACATCCCGGAATTGCACTGACAGTGTTTAGATTTATTGCTCGAAAAGGGAAGACACTGAGATTTGGAGCGCAATTAGTTGGGATAACAGCTGACAACAAGAAAATACTGAAAGAAGAGGACAGTAGCCAAGAAAATGAAGAGGACGAGAAGTTCTTGGAGGAGTACAAGAAGTTAATGAGTAGCAGTAAGGAAAACGAAGAATCCATGTTGTATGAGGAGAAGATGGTCGATAGCAAAGGTGAGATTGCGGTGGCGTTAAAAACACTGAGCAAGCACAACTTGTTTATAGTAGGGAGAATGCCGCCAACTCTCCCGTTGGTAGAGTCGAGTGACTGTGCGGAGCTTGGGCCAATCGGAAGCTTCTTAGCCTCGTCAGACTTCTCTTCCACAGCTTCGGTTGTGGTGATTCAACAGTACGATACTACGGCGACGCAGCCGCTTGTGGTGGAGGAAGTTGACTGTGAGTTGCCGGAGTCGTCTAATTCTATGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0031410 GO:0031982 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0097708 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

808

Amino Acids

87.46

Weight (kDa)

8.9

Isoelectric Point (pI)

39.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	42 - 420	1.6e-62	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	475 - 615	2.8e-52	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	622 - 783	2.3e-17	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17630 AT3G17630
fragaria_vesca	FvH4_4g21880
malus_domestica	MD13G1136000.v1.1 MD16G1131400.v1.1
prunus_persica	Prupe.1G209400_v2.0.a1
pyrus_communis	pycom16g11580
rosa_chinensis	RchiOBHm_Chr3g0483861
rosa_laevigata	RLG00000007178 RLG00000023257
rosa_multiflora	Rmu_co8183874.1_g000001 Rmu_co8462775.1_g000001 Rmu_sc0004940.1_g000012 Rmu_sc0005901.1_g000001 Rmu_sc0009599.1_g000012
rosa_roxburghii	Rroxscaffold_5G00369850 Rroxscaffold_6G00398090
rosa_rugosa	Rorug03G0208200.1 Rorug03G0208300 Rorug04G0222700 Rorug04G0222800
rosa_samantha	Rh3AG257000 Rh3BG293400 Rh3CG291700 Rh3DG286700 Rh4AG279900 Rh4AG280100 Rh4BG285300 Rh4BG285500 Rh4CG300900
rosa_wichuraiana	Rw3G023230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	561, 600
Acc16I	TGCGCA	1 cut(s)	1662
Acc36I	ACCTGC	1 cut(s)	1822
AccB1I	GGYRCC	5 cut(s)	641, 683, 1093, 1412, 1823
AccB7I	CCANNNNNTGG	1 cut(s)	1714
AccBSI	CCGCTC	1 cut(s)	1471
AccI	GTMKAC	3 cut(s)	1440, 1806, 1856
AccII	CGCG	9 cut(s)	435, 742, 845, 857, 1410, 1425, 1481, 1676, 1767
AclWI	GGATC	6 cut(s)	55, 604, 617, 878, 1792, 1805
AcoI	YGGCCR	6 cut(s)	282, 562, 807, 987, 1608, 1839
AcsI	RAATTY	3 cut(s)	192, 1344, 1599
AcuI	CTGAAG	1 cut(s)	83
AcyI	GRCGYC	6 cut(s)	5, 486, 558, 597, 684, 1043
AdeI	CACNNNGTG	1 cut(s)	129
AfaI	GTAC	4 cut(s)	1188, 1271, 2093, 2345
AfiI	CCNNNNNNNGG	4 cut(s)	257, 887, 899, 1714
AflIII	ACRYGT	1 cut(s)	1848
AgsI	TTSAA	5 cut(s)	337, 481, 1630, 1751, 2339
AhdI	GACNNNNNGTC	1 cut(s)	1436
AhlI	ACTAGT	1 cut(s)	1255
AjiI	CACGTC	2 cut(s)	39, 1849
AjnI	CCWGG	1 cut(s)	54
AloI	GAACNNNNNNTCC	4 cut(s)	878, 910, 2063, 2095
Alw21I	GWGCWC	6 cut(s)	330, 540, 777, 1155, 1294, 1464
Alw26I	GTCTC	3 cut(s)	664, 1840, 1912
AlwI	GGATC	6 cut(s)	55, 604, 617, 878, 1792, 1805
AlwNI	CAGNNNCTG	1 cut(s)	1714
Ama87I	CYCGRG	2 cut(s)	165, 323
ApaI	GGGCCC	1 cut(s)	206
ApeKI	GCWGC	3 cut(s)	812, 1582, 2362
ApoI	RAATTY	3 cut(s)	192, 1344, 1599
ArsI	GACNNNNNNTTYG	2 cut(s)	1187, 1219
AspS9I	GGNCC	8 cut(s)	202, 203, 464, 670, 890, 1473, 1549, 2276
AsuC2I	CCSGG	3 cut(s)	937, 1895, 1935
AsuII	TTCGAA	1 cut(s)	1342
AvaI	CYCGRG	2 cut(s)	165, 323
AvaII	GGWCC	4 cut(s)	670, 890, 1473, 1549
BaeGI	GKGCMC	1 cut(s)	206
BalI	TGGCCA	2 cut(s)	284, 989
BamHI	GGATCC	2 cut(s)	609, 1797
BanI	GGYRCC	5 cut(s)	641, 683, 1093, 1412, 1823
BanII	GRGCYC	8 cut(s)	206, 330, 540, 777, 975, 1155, 1294, 1464
BauI	CACGAG	1 cut(s)	1640
BbsI	GAAGAC	2 cut(s)	469, 1985
Bbv12I	GWGCWC	6 cut(s)	330, 540, 777, 1155, 1294, 1464
BbvCI	CCTCAGC	1 cut(s)	208
BbvI	GCAGC	3 cut(s)	824, 1594, 2374
BceAI	ACGGC	6 cut(s)	689, 772, 1056, 1094, 1875, 2370
BcgI	CGANNNNNNTGC	2 cut(s)	436, 470
BciT130I	CCWGG	1 cut(s)	56
BciVI	GTATCC	1 cut(s)	831
BclI	TGATCA	1 cut(s)	1386
BcnI	CCSGG	3 cut(s)	937, 1895, 1935
BcoDI	GTCTC	3 cut(s)	664, 1840, 1912
BcuI	ACTAGT	1 cut(s)	1255
BfaI	CTAG	4 cut(s)	126, 272, 1256, 1802
BfoI	RGCGCY	3 cut(s)	687, 1118, 1865
BfuAI	ACCTGC	1 cut(s)	1822
BfuI	GTATCC	1 cut(s)	831
BglI	GCCNNNNNGGC	2 cut(s)	737, 1512
BlpI	GCTNAGC	1 cut(s)	1586
Bme1390I	CCNGG	4 cut(s)	56, 937, 1895, 1935
Bme18I	GGWCC	4 cut(s)	670, 890, 1473, 1549
BmeRI	GACNNNNNGTC	1 cut(s)	1436
BmeT110I	CYCGRG	2 cut(s)	165, 323
BmgBI	CACGTC	2 cut(s)	39, 1849
BmgT120I	GGNCC	8 cut(s)	202, 203, 464, 670, 890, 1473, 1549, 2276
BmrFI	CCNGG	4 cut(s)	56, 937, 1895, 1935
BmrI	ACTGGG	1 cut(s)	209
BmsI	GCATC	5 cut(s)	381, 396, 420, 534, 576
BmuI	ACTGGG	1 cut(s)	209
BpiI	GAAGAC	2 cut(s)	469, 1985
BplI	GAGNNNNNCTC	2 cut(s)	1460, 1492
Bpu10I	CCTNAGC	1 cut(s)	208
Bpu1102I	GCTNAGC	1 cut(s)	1586
Bpu14I	TTCGAA	1 cut(s)	1342
BpuEI	CTTGAG	2 cut(s)	524, 959
BpuMI	CCSGG	3 cut(s)	937, 1895, 1935
BsaBI	GATNNNNATC	1 cut(s)	1391
BsaHI	GRCGYC	6 cut(s)	5, 486, 558, 597, 684, 1043
BsaI	GGTCTC	1 cut(s)	1840
BsaJI	CCNNGG	8 cut(s)	55, 367, 406, 1110, 1408, 1488, 1674, 1725
BsaXI	ACNNNNNCTCC	4 cut(s)	323, 353, 878, 908
Bsc4I	CCNNNNNNNGG	4 cut(s)	257, 887, 899, 1714
Bse118I	RCCGGY	2 cut(s)	638, 686
Bse1I	ACTGG	5 cut(s)	204, 358, 764, 1908, 1926
Bse3DI	GCAATG	2 cut(s)	627, 1686
Bse8I	GATNNNNATC	1 cut(s)	1391
BseBI	CCWGG	1 cut(s)	56
BseDI	CCNNGG	8 cut(s)	55, 367, 406, 1110, 1408, 1488, 1674, 1725
BseGI	GGATG	7 cut(s)	93, 267, 342, 426, 525, 714, 1930
BseJI	GATNNNNATC	1 cut(s)	1391
BseLI	CCNNNNNNNGG	4 cut(s)	257, 887, 899, 1714
BseMI	GCAATG	2 cut(s)	627, 1686
BseMII	CTCAG	6 cut(s)	222, 1114, 1479, 1600, 1976, 2186
BseNI	ACTGG	5 cut(s)	204, 358, 764, 1908, 1926
BseRI	GAGGAG	5 cut(s)	536, 605, 665, 2102, 2159
BseSI	GKGCMC	1 cut(s)	206
BseX3I	CGGCCG	1 cut(s)	562
BseXI	GCAGC	3 cut(s)	824, 1594, 2374
Bsh1236I	CGCG	9 cut(s)	435, 742, 845, 857, 1410, 1425, 1481, 1676, 1767
Bsh1285I	CGRYCG	1 cut(s)	565
BshNI	GGYRCC	5 cut(s)	641, 683, 1093, 1412, 1823
BsiEI	CGRYCG	1 cut(s)	565
BsiHKAI	GWGCWC	6 cut(s)	330, 540, 777, 1155, 1294, 1464
BsiHKCI	CYCGRG	2 cut(s)	165, 323
BsiSI	CCGG	8 cut(s)	639, 687, 900, 936, 1607, 1894, 1935, 2399
BslFI	GGGAC	5 cut(s)	349, 733, 1078, 1390, 1752
BslI	CCNNNNNNNGG	4 cut(s)	257, 887, 899, 1714
BsmAI	GTCTC	3 cut(s)	664, 1840, 1912
BsmBI	CGTCTC	1 cut(s)	664
BsmFI	GGGAC	5 cut(s)	349, 733, 1078, 1390, 1752
BsmI	GAATGC	1 cut(s)	2232
Bso31I	GGTCTC	1 cut(s)	1840
BsoBI	CYCGRG	2 cut(s)	165, 323
Bsp119I	TTCGAA	1 cut(s)	1342
Bsp120I	GGGCCC	1 cut(s)	202
Bsp1286I	GDGCHC	8 cut(s)	206, 330, 540, 777, 975, 1155, 1294, 1464
Bsp1407I	TGTACA	1 cut(s)	1269
Bsp143I	GATC	8 cut(s)	47, 102, 609, 870, 1386, 1482, 1560, 1797
Bsp1720I	GCTNAGC	1 cut(s)	1586
Bsp19I	CCATGG	2 cut(s)	1488, 1725
BspCNI	CTCAG	6 cut(s)	221, 1113, 1478, 1599, 1977, 2187
BspFNI	CGCG	9 cut(s)	435, 742, 845, 857, 1410, 1425, 1481, 1676, 1767
BspMI	ACCTGC	1 cut(s)	1822
BspPI	GGATC	6 cut(s)	55, 604, 617, 878, 1792, 1805
BspQI	GCTCTTC	1 cut(s)	87
BspT104I	TTCGAA	1 cut(s)	1342
BspT107I	GGYRCC	5 cut(s)	641, 683, 1093, 1412, 1823
BspTNI	GGTCTC	1 cut(s)	1840
BsrBI	CCGCTC	1 cut(s)	1471
BsrDI	GCAATG	2 cut(s)	627, 1686
BsrFI	RCCGGY	2 cut(s)	638, 686
BsrGI	TGTACA	1 cut(s)	1269
BsrI	ACTGG	5 cut(s)	204, 358, 764, 1908, 1926
BssAI	RCCGGY	2 cut(s)	638, 686
BssECI	CCNNGG	8 cut(s)	55, 367, 406, 1110, 1408, 1488, 1674, 1725
BssMI	GATC	8 cut(s)	47, 102, 609, 870, 1386, 1482, 1560, 1797
BssNAI	GTATAC	1 cut(s)	1857
BssNI	GRCGYC	6 cut(s)	5, 486, 558, 597, 684, 1043
BssSI	CACGAG	1 cut(s)	1640
BssT1I	CCWWGG	2 cut(s)	1488, 1725
Bst1107I	GTATAC	1 cut(s)	1857
Bst2BI	CACGAG	1 cut(s)	1640
Bst2UI	CCWGG	1 cut(s)	56
Bst6I	CTCTTC	5 cut(s)	87, 1627, 2037, 2061, 2317
BstACI	GRCGYC	6 cut(s)	5, 486, 558, 597, 684, 1043
BstAUI	TGTACA	1 cut(s)	1269
BstBI	TTCGAA	1 cut(s)	1342
BstDEI	CTNAG	7 cut(s)	208, 1100, 1465, 1586, 1985, 2195, 2293
BstDSI	CCRYGG	5 cut(s)	1110, 1408, 1488, 1674, 1725
BstF5I	GGATG	7 cut(s)	93, 267, 342, 426, 525, 714, 1930
BstFNI	CGCG	9 cut(s)	435, 742, 845, 857, 1410, 1425, 1481, 1676, 1767
BstH2I	RGCGCY	3 cut(s)	687, 1118, 1865
BstKTI	GATC	8 cut(s)	50, 105, 612, 873, 1389, 1485, 1563, 1800
BstMAI	GTCTC	3 cut(s)	664, 1840, 1912
BstMBI	GATC	8 cut(s)	47, 102, 609, 870, 1386, 1482, 1560, 1797
BstMCI	CGRYCG	1 cut(s)	565
BstNI	CCWGG	1 cut(s)	56
BstNSI	RCATGY	3 cut(s)	1356, 1639, 1781
BstSCI	CCNGG	4 cut(s)	54, 935, 1893, 1933
BstSLI	GKGCMC	1 cut(s)	206
BstUI	CGCG	9 cut(s)	435, 742, 845, 857, 1410, 1425, 1481, 1676, 1767
BstV1I	GCAGC	3 cut(s)	824, 1594, 2374
BstV2I	GAAGAC	2 cut(s)	469, 1985
BstX2I	RGATCY	3 cut(s)	47, 609, 1797
BstXI	CCANNNNNNTGG	2 cut(s)	805, 1144
BstYI	RGATCY	3 cut(s)	47, 609, 1797
BstZ17I	GTATAC	1 cut(s)	1857
BstZI	CGGCCG	1 cut(s)	562
BsuI	GTATCC	1 cut(s)	831
BtgI	CCRYGG	5 cut(s)	1110, 1408, 1488, 1674, 1725
BtgZI	GCGATG	3 cut(s)	358, 397, 553
BtrI	CACGTC	2 cut(s)	39, 1849
BtsCI	GGATG	7 cut(s)	93, 267, 342, 426, 525, 714, 1930
BtsI	GCAGTG	1 cut(s)	1272
BtsIMutI	CAGTG	8 cut(s)	351, 1272, 1434, 1901, 1943, 1956, 1982, 2192
BveI	ACCTGC	1 cut(s)	1822
CaiI	CAGNNNCTG	1 cut(s)	1714
Cfr10I	RCCGGY	2 cut(s)	638, 686
Cfr13I	GGNCC	8 cut(s)	202, 203, 464, 670, 890, 1473, 1549, 2276
Cfr42I	CCGCGG	2 cut(s)	1411, 1677
CseI	GACGC	5 cut(s)	475, 775, 1032, 1756, 2368
Csp6I	GTAC	4 cut(s)	1187, 1270, 2092, 2344
CviQI	GTAC	4 cut(s)	1187, 1270, 2092, 2344
DdeI	CTNAG	7 cut(s)	208, 1100, 1465, 1586, 1985, 2195, 2293
DinI	GGCGCC	1 cut(s)	685
DpnI	GATC	8 cut(s)	49, 104, 611, 872, 1388, 1484, 1562, 1799
DpnII	GATC	8 cut(s)	47, 102, 609, 870, 1386, 1482, 1560, 1797
DraIII	CACNNNGTG	1 cut(s)	129
DriI	GACNNNNNGTC	1 cut(s)	1436
EaeI	YGGCCR	6 cut(s)	282, 562, 807, 987, 1608, 1839
EagI	CGGCCG	1 cut(s)	562
Eam1104I	CTCTTC	5 cut(s)	87, 1627, 2037, 2061, 2317
Eam1105I	GACNNNNNGTC	1 cut(s)	1436
EarI	CTCTTC	5 cut(s)	87, 1627, 2037, 2061, 2317
EciI	GGCGGA	4 cut(s)	235, 335, 412, 568
Ecl136II	GAGCTC	6 cut(s)	328, 538, 775, 1153, 1292, 1462
EclXI	CGGCCG	1 cut(s)	562
Eco130I	CCWWGG	2 cut(s)	1488, 1725
Eco147I	AGGCCT	3 cut(s)	230, 294, 1574
Eco24I	GRGCYC	8 cut(s)	206, 330, 540, 777, 975, 1155, 1294, 1464
Eco31I	GGTCTC	1 cut(s)	1840
Eco47I	GGWCC	4 cut(s)	670, 890, 1473, 1549
Eco52I	CGGCCG	1 cut(s)	562
Eco53kI	GAGCTC	6 cut(s)	328, 538, 775, 1153, 1292, 1462
Eco57I	CTGAAG	1 cut(s)	83
Eco88I	CYCGRG	2 cut(s)	165, 323
EcoICRI	GAGCTC	6 cut(s)	328, 538, 775, 1153, 1292, 1462
EcoO109I	RGGNCCY	2 cut(s)	203, 670
EcoRI	GAATTC	1 cut(s)	192
EcoRII	CCWGG	1 cut(s)	54
EcoT14I	CCWWGG	2 cut(s)	1488, 1725
EcoT38I	GRGCYC	8 cut(s)	206, 330, 540, 777, 975, 1155, 1294, 1464
EgeI	GGCGCC	1 cut(s)	685
EheI	GGCGCC	1 cut(s)	685
ErhI	CCWWGG	2 cut(s)	1488, 1725
Esp3I	CGTCTC	1 cut(s)	664
FalI	AAGNNNNNCTT	2 cut(s)	2192, 2224
FaqI	GGGAC	5 cut(s)	349, 733, 1078, 1390, 1752
FauI	CCCGC	6 cut(s)	258, 530, 1376, 1415, 1424, 1511
FauNDI	CATATG	1 cut(s)	1649
FbaI	TGATCA	1 cut(s)	1386
FblI	GTMKAC	3 cut(s)	1440, 1806, 1856
FokI	GGATG	7 cut(s)	80, 274, 329, 413, 512, 701, 1917
FriOI	GRGCYC	8 cut(s)	206, 330, 540, 777, 975, 1155, 1294, 1464
FspAI	RTGCGCAY	1 cut(s)	1662
FspBI	CTAG	4 cut(s)	126, 272, 1256, 1802
FspI	TGCGCA	1 cut(s)	1662
HaeII	RGCGCY	3 cut(s)	687, 1118, 1865
HapII	CCGG	8 cut(s)	639, 687, 900, 936, 1607, 1894, 1935, 2399
HgaI	GACGC	5 cut(s)	475, 775, 1032, 1756, 2368
Hin1I	GRCGYC	6 cut(s)	5, 486, 558, 597, 684, 1043
HincII	GTYRAC	3 cut(s)	592, 1807, 2386
HindII	GTYRAC	3 cut(s)	592, 1807, 2386
HindIII	AAGCTT	1 cut(s)	2287
HinfI	GANTC	8 cut(s)	1400, 1431, 1730, 1815, 2129, 2252, 2335, 2402
HpaII	CCGG	8 cut(s)	639, 687, 900, 936, 1607, 1894, 1935, 2399
Hpy188I	TCNGA	8 cut(s)	102, 158, 237, 1468, 1775, 1880, 2285, 2305
Hpy188III	TCNNGA	4 cut(s)	445, 820, 976, 1328
HpyAV	CCTTC	7 cut(s)	25, 107, 409, 478, 517, 877, 1249
HpyCH4IV	ACGT	5 cut(s)	38, 558, 597, 984, 1848
HpyCH4V	TGCA	5 cut(s)	137, 457, 1450, 1639, 1943
HpyF3I	CTNAG	7 cut(s)	208, 1100, 1465, 1586, 1985, 2195, 2293
HpySE526I	ACGT	5 cut(s)	38, 558, 597, 984, 1848
Hsp92I	GRCGYC	6 cut(s)	5, 486, 558, 597, 684, 1043
KasI	GGCGCC	1 cut(s)	683
KroI	GCCGGC	1 cut(s)	686
KroNI	GCCGGC	1 cut(s)	688
Ksp22I	TGATCA	1 cut(s)	1386
KspI	CCGCGG	2 cut(s)	1411, 1677
Kzo9I	GATC	8 cut(s)	47, 102, 609, 870, 1386, 1482, 1560, 1797
LguI	GCTCTTC	1 cut(s)	87
LmnI	GCTCC	9 cut(s)	549, 772, 1001, 1150, 1289, 1297, 1459, 1994, 2269
Lsp1109I	GCAGC	3 cut(s)	824, 1594, 2374
LweI	GCATC	5 cut(s)	381, 396, 420, 534, 576
MaeI	CTAG	4 cut(s)	126, 272, 1256, 1802
MaeII	ACGT	5 cut(s)	38, 558, 597, 984, 1848
MaeIII	GTNAC	3 cut(s)	787, 820, 2258
MalI	GATC	8 cut(s)	49, 104, 611, 872, 1388, 1484, 1562, 1799
MbiI	CCGCTC	1 cut(s)	1471
MboI	GATC	8 cut(s)	47, 102, 609, 870, 1386, 1482, 1560, 1797
MflI	RGATCY	3 cut(s)	47, 609, 1797
MhlI	GDGCHC	8 cut(s)	206, 330, 540, 777, 975, 1155, 1294, 1464
MlsI	TGGCCA	2 cut(s)	284, 989
MluCI	AATT	8 cut(s)	192, 1056, 1301, 1344, 1599, 1938, 2000, 2410
MluNI	TGGCCA	2 cut(s)	284, 989
Mly113I	GGCGCC	1 cut(s)	684
MlyI	GAGTC	6 cut(s)	1409, 1425, 1739, 1809, 2261, 2411
MmeI	TCCRAC	2 cut(s)	181, 1798
Mox20I	TGGCCA	2 cut(s)	284, 989
MroNI	GCCGGC	1 cut(s)	686
MscI	TGGCCA	2 cut(s)	284, 989
MseI	TTAA	4 cut(s)	147, 1089, 2102, 2186
MslI	CAYNNNNRTG	1 cut(s)	572
Msp20I	TGGCCA	2 cut(s)	284, 989
MspA1I	CMGCKG	3 cut(s)	1410, 1676, 2018
MspI	CCGG	8 cut(s)	639, 687, 900, 936, 1607, 1894, 1935, 2399
MspR9I	CCNGG	4 cut(s)	56, 937, 1895, 1935
Mva1269I	GAATGC	1 cut(s)	2232
MvaI	CCWGG	1 cut(s)	56
MvnI	CGCG	9 cut(s)	435, 742, 845, 857, 1410, 1425, 1481, 1676, 1767
NaeI	GCCGGC	1 cut(s)	688
NarI	GGCGCC	1 cut(s)	684
NciI	CCSGG	3 cut(s)	937, 1895, 1935
NcoI	CCATGG	2 cut(s)	1488, 1725
NdeI	CATATG	1 cut(s)	1649
NdeII	GATC	8 cut(s)	47, 102, 609, 870, 1386, 1482, 1560, 1797
NgoMIV	GCCGGC	1 cut(s)	686
NmeAIII	GCCGAG	4 cut(s)	348, 387, 559, 1817
NmuCI	GTSAC	3 cut(s)	787, 820, 2258
NsbI	TGCGCA	1 cut(s)	1662
NspI	RCATGY	3 cut(s)	1356, 1639, 1781
NspV	TTCGAA	1 cut(s)	1342
PaeI	GCATGC	1 cut(s)	1356
PaeR7I	CTCGAG	1 cut(s)	323
PceI	AGGCCT	3 cut(s)	230, 294, 1574
PciSI	GCTCTTC	1 cut(s)	87
PcsI	WCGNNNNNNNCGW	4 cut(s)	321, 702, 858, 1575
PctI	GAATGC	1 cut(s)	2232
PdiI	GCCGGC	1 cut(s)	688
PfeI	GAWTC	2 cut(s)	2129, 2335
PflMI	CCANNNNNTGG	1 cut(s)	1714
PfoI	TCCNGGA	1 cut(s)	1933
PleI	GAGTC	6 cut(s)	1408, 1425, 1738, 1809, 2260, 2410
PluTI	GGCGCC	1 cut(s)	687
PpsI	GAGTC	6 cut(s)	1408, 1425, 1738, 1809, 2260, 2410
PpuMI	RGGWCCY	1 cut(s)	670
Psp124BI	GAGCTC	6 cut(s)	330, 540, 777, 1155, 1294, 1464
Psp5II	RGGWCCY	1 cut(s)	670
Psp6I	CCWGG	1 cut(s)	54
PspGI	CCWGG	1 cut(s)	54
PspOMI	GGGCCC	1 cut(s)	202
PspPI	GGNCC	8 cut(s)	202, 203, 464, 670, 890, 1473, 1549, 2276
PspPPI	RGGWCCY	1 cut(s)	670
PspXI	VCTCGAGB	1 cut(s)	323
PstNI	CAGNNNCTG	1 cut(s)	1714
PsuI	RGATCY	3 cut(s)	47, 609, 1797
PvuII	CAGCTG	1 cut(s)	2018
RsaI	GTAC	4 cut(s)	1188, 1271, 2093, 2345
RsaNI	GTAC	4 cut(s)	1187, 1270, 2092, 2344
RseI	CAYNNNNRTG	1 cut(s)	572
SacI	GAGCTC	6 cut(s)	330, 540, 777, 1155, 1294, 1464
SacII	CCGCGG	2 cut(s)	1411, 1677
SalI	GTCGAC	1 cut(s)	1805
SapI	GCTCTTC	1 cut(s)	87
SaqAI	TTAA	4 cut(s)	147, 1089, 2102, 2186
Sau3AI	GATC	8 cut(s)	47, 102, 609, 870, 1386, 1482, 1560, 1797
Sau96I	GGNCC	8 cut(s)	202, 203, 464, 670, 890, 1473, 1549, 2276
SchI	GAGTC	6 cut(s)	1409, 1425, 1739, 1809, 2261, 2411
ScrFI	CCNGG	4 cut(s)	56, 937, 1895, 1935
SduI	GDGCHC	8 cut(s)	206, 330, 540, 777, 975, 1155, 1294, 1464
SfaNI	GCATC	5 cut(s)	381, 396, 420, 534, 576
SfoI	GGCGCC	1 cut(s)	685
Sfr274I	CTCGAG	1 cut(s)	323
Sfr303I	CCGCGG	2 cut(s)	1411, 1677
SfuI	TTCGAA	1 cut(s)	1342
SgrBI	CCGCGG	2 cut(s)	1411, 1677
SinI	GGWCC	4 cut(s)	670, 890, 1473, 1549
SlaI	CTCGAG	1 cut(s)	323
SmiMI	CAYNNNNRTG	1 cut(s)	572
SmlI	CTYRAG	3 cut(s)	323, 539, 974
SmoI	CTYRAG	3 cut(s)	323, 539, 974
SpeI	ACTAGT	1 cut(s)	1255
SphI	GCATGC	1 cut(s)	1356
Sse9I	AATT	8 cut(s)	192, 1056, 1301, 1344, 1599, 1938, 2000, 2410
SseBI	AGGCCT	3 cut(s)	230, 294, 1574
SspDI	GGCGCC	1 cut(s)	683
SspI	AATATT	1 cut(s)	1168
SspMI	CTAG	4 cut(s)	126, 272, 1256, 1802
SstI	GAGCTC	6 cut(s)	330, 540, 777, 1155, 1294, 1464
StuI	AGGCCT	3 cut(s)	230, 294, 1574
StyD4I	CCNGG	4 cut(s)	54, 935, 1893, 1933
StyI	CCWWGG	2 cut(s)	1488, 1725
TaiI	ACGT	5 cut(s)	41, 561, 600, 987, 1851
TasI	AATT	8 cut(s)	192, 1056, 1301, 1344, 1599, 1938, 2000, 2410
TatI	WGTACW	2 cut(s)	1269, 2091
TfiI	GAWTC	2 cut(s)	2129, 2335
Tru1I	TTAA	4 cut(s)	147, 1089, 2102, 2186
Tru9I	TTAA	4 cut(s)	147, 1089, 2102, 2186
TscAI	CASTG	8 cut(s)	358, 1272, 1441, 1908, 1950, 1956, 1989, 2199
TseFI	GTSAC	3 cut(s)	787, 820, 2258
TseI	GCWGC	3 cut(s)	812, 1582, 2362
Tsp45I	GTSAC	3 cut(s)	787, 820, 2258
TspDTI	ATGAA	4 cut(s)	44, 1145, 1231, 2079
TspGWI	ACGGA	5 cut(s)	652, 839, 882, 1734, 1780
TspRI	CASTG	8 cut(s)	358, 1272, 1441, 1908, 1950, 1956, 1989, 2199
Van91I	CCANNNNNTGG	1 cut(s)	1714
VpaK11BI	GGWCC	4 cut(s)	670, 890, 1473, 1549
XapI	RAATTY	3 cut(s)	192, 1344, 1599
XceI	RCATGY	3 cut(s)	1356, 1639, 1781
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1144, 1453, 1732
XhoI	CTCGAG	1 cut(s)	323
XmiI	GTMKAC	3 cut(s)	1440, 1806, 1856
XspI	CTAG	4 cut(s)	126, 272, 1256, 1802
ZraI	GACGTC	2 cut(s)	559, 598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.